BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135320.10 - phase: 0
(730 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP053476 162 2e-40
BP030332 124 7e-29
AU089102 115 3e-26
AV413186 99 3e-21
BP081623 81 5e-16
BP066774 77 1e-14
BP038410 74 8e-14
TC19836 65 5e-11
TC20002 similar to UP|Q9FJY7 (Q9FJY7) Selenium-binding protein-l... 60 9e-10
AV767495 57 1e-08
AI967878 56 2e-08
BP063629 55 3e-08
AV769479 51 7e-07
AV766731 49 4e-06
AV779633 45 3e-05
AV409405 45 3e-05
AV769545 44 9e-05
BP035488 43 2e-04
AV781023 41 6e-04
AV773273 37 9e-04
>BP053476
Length = 514
Score = 162 bits (409), Expect = 2e-40
Identities = 73/154 (47%), Positives = 105/154 (67%)
Frame = -3
Query: 577 WNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLKL 636
W DV IRKSM G+ K S +E+ N+V+ F + DR H QS ++Y L+++ LKL
Sbjct: 512 WTDVQTIRKSMLQDGVKKTPGYSLVELANRVYEFTLGDRSHPQSQDVYALLEKITELLKL 333
Query: 637 VGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNESCIRIVKNLRICEDCHSF 696
GY P T +L D+EEE+K+ + +HSEK+A+ + L++ + IR++KNLR+C DCH
Sbjct: 332 EGYVPRTENVLADIEEEEKEPALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMA 153
Query: 697 MKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 730
++L+SKVY EIV+RDR+RFH GG CSC+DYW
Sbjct: 152 IQLISKVYDREIVIRDRSRFHPFRGGKCSCKDYW 51
>BP030332
Length = 466
Score = 124 bits (310), Expect = 7e-29
Identities = 56/105 (53%), Positives = 78/105 (73%)
Frame = -1
Query: 626 KLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNESCIRIVK 685
KL+E VS+LKL GY+P + + +D E ++K+ ++ HSEK+A+ +GL+S I IVK
Sbjct: 463 KLEEXVSRLKLEGYEPDLNQVFLDFESDEKESQLVLHSEKVALAFGLLSLPQGLPIHIVK 284
Query: 686 NLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 730
NLRIC DCH+FM+LVSK+Y+ IVVRD+ RFHH G CSCR++W
Sbjct: 283 NLRICCDCHTFMQLVSKIYKRRIVVRDQNRFHHFDKGCCSCRNHW 149
>AU089102
Length = 480
Score = 115 bits (287), Expect = 3e-26
Identities = 52/157 (33%), Positives = 89/157 (56%)
Frame = +2
Query: 447 FRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYC 506
F +E+ + N VT++ +L AC HAGLV+EG + F ++ I HY C+VDL
Sbjct: 5 FGTRQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEXHYACLVDLCG 184
Query: 507 RANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVV 566
RA L++ +IE + ++ +WG L++ C VHG A++G+ ++L++E ++ G +
Sbjct: 185 RAGRLKEXFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVTTKILKVEHENAGTYSL 364
Query: 567 LSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEI 603
LSN+YA + W + M+ KG+ K+ IE+
Sbjct: 365 LSNMYASXRXWKXXAPVXMKMNDKGLKKQPRCXWIEV 475
Score = 38.1 bits (87), Expect = 0.005
Identities = 28/118 (23%), Positives = 56/118 (46%), Gaps = 6/118 (5%)
Frame = +2
Query: 357 DQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNN----ALIDMYAKCGNLVKA 412
+ +T + +++ACSH G + + Y D+ R++ V L+D+ + G L +
Sbjct: 38 NDVTYVELLTACSHAGLVDEG---IQYFDKLLKNRSIQVKEXHYACLVDLCGRAGRLKEX 208
Query: 413 REVFENMPRKNVIS-WSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGV-TFIGVLYA 468
+ E + K +S W ++ +HGNAD + ++ +V E G + + +YA
Sbjct: 209 FYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVTTKILKVEHENAGTYSLLSNMYA 382
>AV413186
Length = 398
Score = 98.6 bits (244), Expect = 3e-21
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Frame = +1
Query: 401 DMYAKCGNLVKAREVFENMPRK-NVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNG 459
DMY+KCG+L A VF + K +V+ W++MI+A A HG A+ + M +EPN
Sbjct: 4 DMYSKCGSLETAWRVFNLVGNKQDVVLWNTMISALAHHGFGTEAMVMLNDMIRSGVEPNR 183
Query: 460 VTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIE 519
TF+ +L AC +GLV+EG + F M +E G+ P +EHY C+ DL RA + ++++ ++
Sbjct: 184 ATFVVLLNACSLSGLVQEGLQFFKFMTSEFGVVPDQEHYACLTDLLVRAGYFDESVKGLQ 363
Query: 520 TM 521
M
Sbjct: 364 IM 369
Score = 40.4 bits (93), Expect = 0.001
Identities = 21/76 (27%), Positives = 45/76 (58%), Gaps = 1/76 (1%)
Frame = +1
Query: 302 YAKLGMVKDARFIFDQM-IERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQIT 360
Y+K G ++ A +F+ + ++D+V W+ MIS A EA+ + ++M++ P++ T
Sbjct: 10 YSKCGSLETAWRVFNLVGNKQDVVLWNTMISALAHHGFGTEAMVMLNDMIRSGVEPNRAT 189
Query: 361 MLSVISACSHVGALAQ 376
+ +++ACS G + +
Sbjct: 190 FVVLLNACSLSGLVQE 237
>BP081623
Length = 461
Score = 81.3 bits (199), Expect = 5e-16
Identities = 30/87 (34%), Positives = 60/87 (68%)
Frame = -2
Query: 529 IWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMS 588
+WG+L+ AC+++G+ LG +AA+ L EL+P H G ++L+N+YA+ +RW+D +R+ M
Sbjct: 460 VWGALLGACRIYGDVGLGRWAAEHLFELKPQHCGYYILLANMYAEIERWDDANKVRQLMK 281
Query: 589 YKGISKEKASSRIEINNQVHMFMMADR 615
+G K S +++ +++H F++ ++
Sbjct: 280 SRGAKKNPGCSWVKVGDKMHAFLVGEK 200
>BP066774
Length = 516
Score = 76.6 bits (187), Expect = 1e-14
Identities = 34/81 (41%), Positives = 51/81 (61%)
Frame = -1
Query: 648 IDLEEEDKKELVLWHSEKLAVCYGLISRRNESCIRIVKNLRICEDCHSFMKLVSKVYQIE 707
+++ E K ++ HSE+ A+ +GL++ I + KNL +C+ CH+ +K +SK + E
Sbjct: 504 MNIMEASKXDIFCGHSERQAIAFGLLNSAPGMPIWVTKNLYMCQSCHNIVKFISKEVRRE 325
Query: 708 IVVRDRTRFHHCSGGICSCRD 728
I VRD RFHH GGICSC D
Sbjct: 324 ISVRDAERFHHFRGGICSCMD 262
>BP038410
Length = 468
Score = 73.9 bits (180), Expect = 8e-14
Identities = 43/147 (29%), Positives = 74/147 (50%)
Frame = -2
Query: 322 DLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIH 381
DLV W+++ LF +M + T+L ++ A G +H
Sbjct: 404 DLVSWNSVFD-------------LFTKMCWSGLIASASTVLILLPAAGDTGNFVVGKSLH 264
Query: 382 TYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNAD 441
Y + GF L+V ALIDMYAK G + R++F+++ K+V+ W+ +I +A +G
Sbjct: 263 GYYIQIGFSSHLNVLTALIDMYAKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVG 84
Query: 442 SAIKLFRRMKEVNIEPNGVTFIGVLYA 468
A+ L ++M+ ++ N TF+G+L A
Sbjct: 83 EALYLLQKMRIQGMKTNSSTFVGLLLA 3
Score = 67.4 bits (163), Expect = 8e-12
Identities = 39/134 (29%), Positives = 67/134 (49%), Gaps = 3/134 (2%)
Frame = -2
Query: 188 HP---DAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSY 244
HP D V+WN + D LF M S + + + +L A G GN
Sbjct: 419 HPEGNDLVSWNSVFD-------------LFTKMCWSGLIASASTVLILLPAAGDTGNFVV 279
Query: 245 GRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAK 304
G+++H + G++ ++ TALI+MYA G + RKI+D L K +++ ++ YA+
Sbjct: 278 GKSLHGYYIQIGFSSHLNVLTALIDMYAKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 99
Query: 305 LGMVKDARFIFDQM 318
G+V +A ++ +M
Sbjct: 98 NGLVGEALYLLQKM 57
Score = 60.5 bits (145), Expect = 9e-10
Identities = 36/105 (34%), Positives = 49/105 (46%)
Frame = -2
Query: 131 LLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPD 190
LL A F G +HG ++GF + T LI MYA + R +FD + D
Sbjct: 317 LLPAAGDTGNFVVGKSLHGYYIQIGFSSHLNVLTALIDMYAKTGLVHWGRKIFDSLVDKD 138
Query: 191 AVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSA 235
V WN +I Y +NG +AL L + MR MK +S +L A
Sbjct: 137 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLLA 3
Score = 28.1 bits (61), Expect = 5.2
Identities = 17/64 (26%), Positives = 34/64 (52%)
Frame = -2
Query: 458 NGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIEL 517
N +T + +YA GLV G K+F S++++ + + C++ Y R + +A+ L
Sbjct: 227 NVLTALIDMYA--KTGLVHWGRKIFDSLVDKDVVL-----WNCLIGNYARNGLVGEALYL 69
Query: 518 IETM 521
++ M
Sbjct: 68 LQKM 57
>TC19836
Length = 464
Score = 64.7 bits (156), Expect = 5e-11
Identities = 31/87 (35%), Positives = 48/87 (54%)
Frame = +2
Query: 520 TMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWND 579
TMP P+ IW SL+SAC++HG ++ E +L+ EPD+ +L+ IYA+ W
Sbjct: 5 TMPMKPSTRIWSSLVSACKLHGRLDIAEMLGPQLIRSEPDNAANYTLLNMIYAEHGHWLH 184
Query: 580 VGLIRKSMSYKGISKEKASSRIEINNQ 606
+ ++M + + K SRIE NQ
Sbjct: 185 KEQVMEAMKLQRLKKCYGFSRIETGNQ 265
>TC20002 similar to UP|Q9FJY7 (Q9FJY7) Selenium-binding protein-like,
partial (4%)
Length = 560
Score = 60.5 bits (145), Expect = 9e-10
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
Frame = -3
Query: 6 AMTTMSHTHNRITTHPQLLTTL-SSSTTLSHLKQIHAQILHSNTTPENTNTLLSKLALSI 64
A+ TMS + Q L TL + +T++HLK+IHA+I T + N L+ +
Sbjct: 399 AVCTMSPKDATLWKAQQTLMTLFNRCSTMNHLKEIHARIYQ---TGFHQNHLVVGKIIVF 229
Query: 65 CTLSSSSSSLHYALSVFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFAL- 123
C +S + ++YA+SVF ++ P N ++R ++ PEK + Y ++ +
Sbjct: 228 CAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVP 49
Query: 124 DRFSFPSLLKAV 135
D F+F LLK V
Sbjct: 48 DTFTFSFLLKIV 13
Score = 43.9 bits (102), Expect = 9e-05
Identities = 28/118 (23%), Positives = 55/118 (45%), Gaps = 9/118 (7%)
Frame = -3
Query: 264 QTALINMYANCGAMDLARKIY-----DGLSSKHLIVSTAMLSGYAKL--GMVKDARFIFD 316
Q L+ ++ C M+ ++I+ G HL+V ++ + G + A +FD
Sbjct: 354 QQTLMTLFNRCSTMNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFD 175
Query: 317 QMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQ--KRSVPDQITMLSVISACSHVG 372
++ + D W+ MI G+ ++QP++A+ + M Q VPD T ++ +G
Sbjct: 174 RVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLG 1
Score = 40.0 bits (92), Expect = 0.001
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Frame = -3
Query: 130 SLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMD---ARLLFDKM 186
+L+ ++ S NH EIH + GF + + +I A D A +FD++
Sbjct: 348 TLMTLFNRCSTMNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRV 169
Query: 187 CHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSD--MKPDSVILCTVLSACGHAG 240
PDA WN +I G+ + A+ ++ M+ + + PD+ +L G G
Sbjct: 168 DKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLG 1
>AV767495
Length = 586
Score = 56.6 bits (135), Expect = 1e-08
Identities = 47/171 (27%), Positives = 81/171 (46%), Gaps = 2/171 (1%)
Frame = +2
Query: 317 QMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQ 376
+ +E D+V +SA+I ++ + ++ L D M++K P+ +T S+I A + AL
Sbjct: 11 ERLEADVVFYSALIDALCKNGLVESSMVLLDAMIEKGIRPNVVTYNSIIDAFGQLSALEC 190
Query: 377 ANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAM 436
+ T V + R + ++ LID + + K + M + S I M
Sbjct: 191 G--VDTSVQANEH-RVVPSSSMLIDGALQNLAIGKEDDRIMKMFEQLAAEKSGQIKK-DM 358
Query: 437 HGNADS--AIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSM 485
G+ D + LFR+M E+ I+PN VTF +L AC + E+ KL +
Sbjct: 359 RGSQDKFCILWLFRKMHEMEIKPNVVTFSAILNACSNCKSFEDASKLLDEL 511
Score = 36.2 bits (82), Expect = 0.019
Identities = 40/170 (23%), Positives = 67/170 (38%), Gaps = 36/170 (21%)
Frame = +2
Query: 423 NVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLF 482
+V+ +S++I+A +G +S++ L M E I PN VT+ ++ A G +E G
Sbjct: 26 DVVFYSALIDALCKNGLVESSMVLLDAMIEKGIRPNVVTYNSIIDAFGQLSALECGVDT- 202
Query: 483 SSMINEHGISPT------------------------------------REHYGCMVDLYC 506
S NEH + P+ ++ D +C
Sbjct: 203 SVQANEHRVVPSSSMLIDGALQNLAIGKEDDRIMKMFEQLAAEKSGQIKKDMRGSQDKFC 382
Query: 507 RANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLEL 556
RK E M PNV+ + ++++AC + E A+K L EL
Sbjct: 383 ILWLFRKMHE----MEIKPNVVTFSAILNAC---SNCKSFEDASKLLDEL 511
>AI967878
Length = 393
Score = 56.2 bits (134), Expect = 2e-08
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 20/98 (20%)
Frame = +1
Query: 422 KNVISWSSMINAFAMHGNADSAIKLFRRMK-------EVNIE-------------PNGVT 461
+N++SW++MI +HGN + + LF M EV I+ P+ VT
Sbjct: 31 RNLVSWNAMILGHCIHGNPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLPPDEVT 210
Query: 462 FIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYG 499
FIG+L AC A L+ EG F M + G+ P YG
Sbjct: 211 FIGILCACARAELLAEGRSYFKQMTDVFGLKPILLIYG 324
Score = 43.5 bits (101), Expect = 1e-04
Identities = 32/121 (26%), Positives = 50/121 (40%), Gaps = 21/121 (17%)
Frame = +1
Query: 321 RDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSV--------------------PDQIT 360
R+LV W+AMI G+ P++ L LFDEM+ V PD++T
Sbjct: 31 RNLVSWNAMILGHCIHGNPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLPPDEVT 210
Query: 361 MLSVISACSHVGALAQA-NWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENM 419
+ ++ AC+ LA+ ++ D G L + A G L+K + V
Sbjct: 211 FIGILCACARAELLAEGRSYFKQMTDVFGLKPILLIYGAWPICLQMHGLLMKPKSVCGTW 390
Query: 420 P 420
P
Sbjct: 391 P 393
Score = 39.7 bits (91), Expect = 0.002
Identities = 24/83 (28%), Positives = 38/83 (44%), Gaps = 20/83 (24%)
Frame = +1
Query: 192 VAWNMIIDGYCQNGHYDDALRLFEDMRSSD--------------------MKPDSVILCT 231
V+WN +I G+C +G+ +D L LF++M D + PD V
Sbjct: 40 VSWNAMILGHCIHGNPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLPPDEVTFIG 219
Query: 232 VLSACGHAGNLSYGRTIHEFVKD 254
+L AC A L+ GR+ + + D
Sbjct: 220 ILCACARAELLAEGRSYFKQMTD 288
>BP063629
Length = 525
Score = 55.5 bits (132), Expect = 3e-08
Identities = 26/89 (29%), Positives = 49/89 (54%)
Frame = +1
Query: 182 LFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGN 241
+FD + P +N++I + + G + A+ LF+ +R + PD+ VL A G G+
Sbjct: 259 IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 438
Query: 242 LSYGRTIHEFVKDNGYAIDSHLQTALINM 270
+ GR +H FV +G D+++ +L++M
Sbjct: 439 VGQGRKVHAFVIKSGLEFDAYVCNSLMDM 525
>AV769479
Length = 287
Score = 50.8 bits (120), Expect = 7e-07
Identities = 25/86 (29%), Positives = 48/86 (55%)
Frame = +1
Query: 365 ISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNV 424
++ CS LA IH ++ +S + R L +NA ++ YA+CG + A F+ M +++V
Sbjct: 16 MNLCSKRVDLALGKQIHAHILKSKW-RNLIADNAFVNFYAECGKISSAFRTFDRMAKRDV 192
Query: 425 ISWSSMINAFAMHGNADSAIKLFRRM 450
+ W+++I A + G A+ + +M
Sbjct: 193 VCWTTIITACSQQGLGHEALLILSQM 270
Score = 47.4 bits (111), Expect = 8e-06
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +1
Query: 290 KHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEM 349
++LI A ++ YA+ G + A FD+M +RD+VCW+ +I+ ++ EAL + +M
Sbjct: 91 RNLIADNAFVNFYAECGKISSAFRTFDRMAKRDVVCWTTIITACSQQGLGHEALLILSQM 270
Query: 350 L 350
L
Sbjct: 271 L 273
Score = 40.0 bits (92), Expect = 0.001
Identities = 19/87 (21%), Positives = 45/87 (50%)
Frame = +1
Query: 233 LSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHL 292
++ C +L+ G+ IH + + + + A +N YA CG + A + +D ++ + +
Sbjct: 16 MNLCSKRVDLALGKQIHAHILKSKWR-NLIADNAFVNFYAECGKISSAFRTFDRMAKRDV 192
Query: 293 IVSTAMLSGYAKLGMVKDARFIFDQMI 319
+ T +++ ++ G+ +A I QM+
Sbjct: 193 VCWTTIITACSQQGLGHEALLILSQML 273
Score = 35.8 bits (81), Expect = 0.025
Identities = 18/51 (35%), Positives = 23/51 (44%)
Frame = +1
Query: 167 IAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDM 217
+ YA C +I A FD+M D V W II Q G +AL + M
Sbjct: 118 VNFYAECGKISSAFRTFDRMAKRDVVCWTTIITACSQQGLGHEALLILSQM 270
>AV766731
Length = 576
Score = 48.5 bits (114), Expect = 4e-06
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Frame = -3
Query: 327 SAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDR 386
+++I+G ++ + A++L D M + D IT S+ L +A + V
Sbjct: 535 NSLINGLCKARRISCAVELVDVMHETGPPADLITTNSLFDGLCKHHLLDKAIALFMKVKD 356
Query: 387 SGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRK----NVISWSSMINAFAMHGNADS 442
+ +ID K G L A+E+F+ + + NV++++ MIN + G D
Sbjct: 355 PKIQPNIPPYPVIIDGLCKVGRLKIAQEIFQVLLSEGYNLNVMTYTVMINGYCKEGLLDE 176
Query: 443 AIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMI 486
A L +M++ PN V F ++ A ++ E+LF MI
Sbjct: 175 AQALLSKMEDNGCIPNAVNFQTIICALFEKNENDKAERLFREMI 44
Score = 27.7 bits (60), Expect = 6.8
Identities = 21/111 (18%), Positives = 50/111 (44%), Gaps = 1/111 (0%)
Frame = -3
Query: 184 DKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLS 243
D P+ + +IIDG C+ G A +F+ + S + + +++ G L
Sbjct: 358 DPKIQPNIPPYPVIIDGLCKVGRLKIAQEIFQVLLSEGYNLNVMTYTVMINGYCKEGLLD 179
Query: 244 YGRTIHEFVKDNGYAIDS-HLQTALINMYANCGAMDLARKIYDGLSSKHLI 293
+ + ++DNG ++ + QT + ++ D A +++ + ++ L+
Sbjct: 178 EAQALLSKMEDNGCIPNAVNFQTIICALFEK-NENDKAERLFREMIARDLL 29
>AV779633
Length = 440
Score = 45.4 bits (106), Expect = 3e-05
Identities = 36/137 (26%), Positives = 62/137 (44%)
Frame = -2
Query: 183 FDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNL 242
FD D + N +IDGYC+ G AL L E+ + +KPD V ++L AG+L
Sbjct: 439 FDGGIARDVIGLNTLIDGYCEAGLMSQALALMENSWKTGVKPDIVSYNSLLKGFCKAGDL 260
Query: 243 SYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGY 302
++ + + G+ D N D R I L++ T ++S Y
Sbjct: 259 VRAESLFDEIL--GFQRDGESGQLKNNA---VDTRDELRNIRPTLAT-----YTTLISAY 110
Query: 303 AKLGMVKDARFIFDQMI 319
K ++++R +++QM+
Sbjct: 109 GKHCGIEESRSLYEQMV 59
>AV409405
Length = 424
Score = 45.4 bits (106), Expect = 3e-05
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +1
Query: 146 EIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNG 205
++H L KLG D FI T L +Y I A LFD+ WN ++ Y G
Sbjct: 199 QLHSLCLKLGLTHDSFIVTKLNVLYGKHASIHHAHKLFDETPDKSVYLWNALLRRYRAEG 378
Query: 206 HYDDALRLFEDMRSS 220
+ + L LF M ++
Sbjct: 379 EWAETLSLFRRMHAT 423
Score = 35.4 bits (80), Expect = 0.033
Identities = 14/49 (28%), Positives = 27/49 (54%)
Frame = +1
Query: 402 MYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRM 450
+Y K ++ A ++F+ P K+V W++++ + G + LFRRM
Sbjct: 268 LYGKHASIHHAHKLFDETPDKSVYLWNALLRRYRAEGEWAETLSLFRRM 414
Score = 30.0 bits (66), Expect = 1.4
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +1
Query: 286 GLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKL 345
GL+ IV T + Y K + A +FD+ ++ + W+A++ Y + E L L
Sbjct: 226 GLTHDSFIV-TKLNVLYGKHASIHHAHKLFDETPDKSVYLWNALLRRYRAEGEWAETLSL 402
Query: 346 FDEM 349
F M
Sbjct: 403 FRRM 414
Score = 28.1 bits (61), Expect = 5.2
Identities = 20/95 (21%), Positives = 38/95 (39%)
Frame = +1
Query: 23 LLTTLSSSTTLSHLKQIHAQILHSNTTPENTNTLLSKLALSICTLSSSSSSLHYALSVFS 82
+ T L + Q+H+ L T + S + + L +S+H+A +F
Sbjct: 154 IATLLETCHCEKSTSQLHSLCLKLGLTHD------SFIVTKLNVLYGKHASIHHAHKLFD 315
Query: 83 QIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRA 117
+ P+ + N LLR +T+ L+ + A
Sbjct: 316 ETPDKSVYLWNALLRRYRAEGEWAETLSLFRRMHA 420
>AV769545
Length = 536
Score = 43.9 bits (102), Expect = 9e-05
Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = -2
Query: 577 WNDVGL----IRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVS 632
W +G+ +R + + K S +E+ N+VH F+ +DR+H +SD+I+E L ++
Sbjct: 526 WTRIGIMLAKLRSLIKENRLKKVLGQSMVELKNEVHSFVASDRFHDESDQIFEVLRKLDV 347
Query: 633 KLK 635
K++
Sbjct: 346 KMR 338
>BP035488
Length = 534
Score = 43.1 bits (100), Expect = 2e-04
Identities = 22/74 (29%), Positives = 37/74 (49%), Gaps = 5/74 (6%)
Frame = +3
Query: 174 RRIMDARLLFDKMC-----HPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVI 228
+ + DA LF H D WN+I++G+C G+ +A R+++D+ +S +PD
Sbjct: 3 KHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFT 182
Query: 229 LCTVLSACGHAGNL 242
T + A G L
Sbjct: 183 YATFIKALTKKGKL 224
Score = 42.0 bits (97), Expect = 3e-04
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Frame = +3
Query: 411 KAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACG 470
KARE +++ +W+ ++N + + GNA A ++++ + P+ T+ + A
Sbjct: 39 KAREF---QLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDLFTYATFIKALT 209
Query: 471 HAGLVEEGEKLFSSMINEH-GISPTREHYGCMVDLYCRANFLRKAIELIETMP---FAPN 526
G + KLF M NE P C++D C + +A+E+ + M PN
Sbjct: 210 KKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPN 389
Query: 527 VIIWGSLM 534
V + SL+
Sbjct: 390 VATYNSLI 413
Score = 38.5 bits (88), Expect = 0.004
Identities = 21/68 (30%), Positives = 32/68 (46%)
Frame = +3
Query: 187 CHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGR 246
C PD V N IID C +AL +F+DM+ +P+ + T S H +
Sbjct: 273 CKPDVVICNCIIDALCFKKRVPEALEVFQDMKERGCEPN---VATYNSLIKHLCKIRRME 443
Query: 247 TIHEFVKD 254
++E V+D
Sbjct: 444 KVYELVED 467
Score = 30.0 bits (66), Expect = 1.4
Identities = 26/120 (21%), Positives = 51/120 (41%), Gaps = 8/120 (6%)
Frame = +3
Query: 124 DRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASC--RRIMDARL 181
D F++ + +KA++K L++ G P + + A C +R+ +A
Sbjct: 171 DLFTYATFIKALTKKGKLGTALKLFRGMWNEGCNCKPDVVICNCIIDALCFKKRVPEALE 350
Query: 182 LFDKM----CHPDAVAWNMIIDGYCQNGHYDDALRLFEDM--RSSDMKPDSVILCTVLSA 235
+F M C P+ +N +I C+ + L EDM + P++V +L++
Sbjct: 351 VFQDMKERGCEPNVATYNSLIKHLCKIRRMEKVYELVEDMERKKGSCMPNAVTYSCLLNS 530
>AV781023
Length = 555
Score = 41.2 bits (95), Expect = 6e-04
Identities = 15/21 (71%), Positives = 16/21 (75%)
Frame = -1
Query: 710 VRDRTRFHHCSGGICSCRDYW 730
+RD TRFHH GG CSC DYW
Sbjct: 555 LRDHTRFHHFRGGQCSCSDYW 493
>AV773273
Length = 356
Score = 37.0 bits (84), Expect(2) = 9e-04
Identities = 19/58 (32%), Positives = 31/58 (52%), Gaps = 2/58 (3%)
Frame = -3
Query: 666 LAVCYGLI-SRRNESCIRIVKNLRICEDCHS-FMKLVSKVYQIEIVVRDRTRFHHCSG 721
LA+ YGL + + ++ R+C DCH+ + + E++VRD RFHH +G
Sbjct: 354 LAIAYGLT*YSTHAHLLESLRTFRVCGDCHNRHSRSCPGLVGRELIVRDNKRFHHFTG 181
Score = 22.7 bits (47), Expect(2) = 9e-04
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 722 GICSCRDYW 730
G CSC DYW
Sbjct: 179 GKCSCGDYW 153
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.322 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,263,175
Number of Sequences: 28460
Number of extensions: 195418
Number of successful extensions: 1238
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of query: 730
length of database: 4,897,600
effective HSP length: 97
effective length of query: 633
effective length of database: 2,136,980
effective search space: 1352708340
effective search space used: 1352708340
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)
Medicago: description of AC135320.10