TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135315.2 - phase: 0 
         (478 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC8853 similar to PIR|T09217|T09217 protein sam2B - spinach {Spi...    30  0.86
TC14892 similar to UP|Q9Z0W6 (Q9Z0W6) Pax transcription activati...    29  1.9
TC19138 weakly similar to UP|Q9LZJ3 (Q9LZJ3) Alpha galactosyltra...    29  1.9
TC8711 weakly similar to UP|VCLC_PEA (P13918) Vicilin precursor,...    28  3.3
AV412950                                                               28  3.3
AV773315                                                               27  5.6
TC9818 similar to UP|Q7XA50 (Q7XA50) Sorbitol-like transporter, ...    27  5.6
TC7928 similar to UP|Q93YR3 (Q93YR3) HSP associated protein like...    27  5.6
BI418387                                                               27  5.6
TC19760 weakly similar to UP|CPR2_PETCR (Q99090) Light-inducible...    27  7.3
TC15099 weakly similar to UP|Q8LQG1 (Q8LQG1) Vacuolar sorting re...    27  7.3
AV414175                                                               27  7.3
TC14231                                                                27  7.3
BP038362                                                               27  7.3
BP055755                                                               27  9.6
TC11869                                                                27  9.6

>TC8853 similar to PIR|T09217|T09217 protein sam2B - spinach {Spinacia
           oleracea;}, partial (43%)
          Length = 1157

 Score = 30.0 bits (66), Expect = 0.86
 Identities = 16/45 (35%), Positives = 28/45 (61%), Gaps = 3/45 (6%)
 Frame = +3

Query: 412 DGKDEQKTHENLMLKKELVKVRRELEEK---DELLMRDSKRARGR 453
           +GK+E +  + + +KKELVKV +E  E+    +L+    ++A GR
Sbjct: 381 EGKEETEEEKRMRVKKELVKVAKEQAERRATAQLMFDLGQKAYGR 515


>TC14892 similar to UP|Q9Z0W6 (Q9Z0W6) Pax transcription activation domain
            interacting protein PTIP, partial (3%)
          Length = 1502

 Score = 28.9 bits (63), Expect = 1.9
 Identities = 13/29 (44%), Positives = 17/29 (57%)
 Frame = -1

Query: 411  LDGKDEQKTHENLMLKKELVKVRRELEEK 439
            L  KDEQ TH+NL   K +  + RE+  K
Sbjct: 1193 LSPKDEQTTHQNLNFSKHVSHLAREITTK 1107


>TC19138 weakly similar to UP|Q9LZJ3 (Q9LZJ3) Alpha
           galactosyltransferase-like protein
           (AT3g62720/F26K9_150), partial (12%)
          Length = 458

 Score = 28.9 bits (63), Expect = 1.9
 Identities = 20/68 (29%), Positives = 30/68 (43%), Gaps = 8/68 (11%)
 Frame = +1

Query: 341 EAYTQWVINRAEE--------IGMPYPAMRHVAASAPSIPLPLPPTTQEMYQEHLAMESR 392
           E +T+    RAE+        I  P PA   +A   P +PLPLP      ++ H +   R
Sbjct: 169 ERWTEVWCGRAEQQNAGTVLRISPPPPAAARLAPRLPHLPLPLP------HRHHASRHHR 330

Query: 393 KKQMWKAR 400
            +Q+   R
Sbjct: 331 SRQVRNPR 354


>TC8711 weakly similar to UP|VCLC_PEA (P13918) Vicilin precursor, partial
           (74%)
          Length = 1591

 Score = 28.1 bits (61), Expect = 3.3
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 196 RTLKG-RGYILCCVPLLYRWFISHLP 220
           R LK  RG++ CC    + WF+S LP
Sbjct: 42  RVLKSKRGFLCCCCWEFFSWFLSPLP 119


>AV412950 
          Length = 431

 Score = 28.1 bits (61), Expect = 3.3
 Identities = 15/46 (32%), Positives = 25/46 (53%)
 Frame = -1

Query: 98  SLTPLVIAKDLYLKTSDVSKHLITKSHIRGFTSKYLLVQANLETTC 143
           SL+ + IA DL    +DVS  ++ K  +  F S  + ++ +L  TC
Sbjct: 410 SLSFMNIASDLLCHLTDVSFRILAKRDMIHFHSSRIFIRNHLNITC 273


>AV773315 
          Length = 519

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -2

Query: 425 LKKELVKVRRELEEKDELLMRDSKRARGRRNFYARYCGSDSESES 469
           ++  ++K+   L  K     R   + RGR    ARYC    ESES
Sbjct: 452 IRSRMLKLSLMLPSKLFFYHRSRSKTRGRHRRLARYCDYG*ESES 318


>TC9818 similar to UP|Q7XA50 (Q7XA50) Sorbitol-like transporter, partial
           (62%)
          Length = 1162

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 14/36 (38%), Positives = 20/36 (54%), Gaps = 4/36 (11%)
 Frame = +1

Query: 310 PTGQREAFTRAW----SKVRRKSVRHLGVRSGIAHE 341
           P  + E   R+W    S  RR+SV H GV + ++HE
Sbjct: 697 PQSRMENDARSWRTPISNPRRRSVSHAGVPTVVSHE 804


>TC7928 similar to UP|Q93YR3 (Q93YR3) HSP associated protein like, partial
           (52%)
          Length = 765

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = +3

Query: 366 ASAPSIPLPLPP---TTQEMYQEHLAMESRKKQMWKARYNEAENLIMTLDGK 414
           ASAPS PLPL P   T + M    + M S+ +   + +     NLI +L GK
Sbjct: 117 ASAPSFPLPLTPIRSTRRAMMI*KIFMRSK*RWKNQRKMMR*LNLISSLKGK 272


>BI418387 
          Length = 479

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 11/28 (39%), Positives = 14/28 (49%)
 Frame = +3

Query: 359 PAMRHVAASAPSIPLPLPPTTQEMYQEH 386
           P   H  +S   +PLPLP T   M + H
Sbjct: 63  PLQPHTCSSHTLLPLPLPSTLHSMVETH 146


>TC19760 weakly similar to UP|CPR2_PETCR (Q99090) Light-inducible protein
           CPRF-2, partial (21%)
          Length = 573

 Score = 26.9 bits (58), Expect = 7.3
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 82  LGSPIAEKTPFTGPGASLTPLV 103
           LG P  +  PFTG GA+ TP++
Sbjct: 321 LGGPSDKTPPFTGVGAAATPVL 256


>TC15099 weakly similar to UP|Q8LQG1 (Q8LQG1) Vacuolar sorting receptor-like
           protein, partial (16%)
          Length = 687

 Score = 26.9 bits (58), Expect = 7.3
 Identities = 11/29 (37%), Positives = 16/29 (54%)
 Frame = -2

Query: 355 GMPYPAMRHVAASAPSIPLPLPPTTQEMY 383
           G P+P++R+ A    + P P P T Q  Y
Sbjct: 209 GCPFPSIRYSAKYVKTRPTP*PSTVQRKY 123


>AV414175 
          Length = 226

 Score = 26.9 bits (58), Expect = 7.3
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 206 CCVPLLYRWFISHLPSSFHDNSEDW 230
           CC P    W  +H     H NS+DW
Sbjct: 108 CCQPFWELWVWTHGRFHSHGNSQDW 182


>TC14231 
          Length = 803

 Score = 26.9 bits (58), Expect = 7.3
 Identities = 18/67 (26%), Positives = 31/67 (45%), Gaps = 4/67 (5%)
 Frame = -2

Query: 241 PNEVVWITPAAQV----KEIITGCGDFLNVPLLGTRGGINYNPELAMRQFGFPMKTKPIN 296
           PN +VW  PAA      K I +G G+ ++V L+      + + +L +  F    +   + 
Sbjct: 328 PNPIVWALPAACYL*CHKTISSGVGNEVHVHLISISSNKHISTKLLVESFDHINELWIVQ 149

Query: 297 LATSPEF 303
             +S EF
Sbjct: 148 RCSSXEF 128


>BP038362 
          Length = 274

 Score = 26.9 bits (58), Expect = 7.3
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 69  FQLVPTLEAYSYLLGSPIAEKTPFTGPGASLTPLVI 104
           F   PT+EA+SYL       ++    P   LTPL++
Sbjct: 209 FPFSPTVEAFSYLGHGTSPWESSHPSPTLDLTPLIL 102


>BP055755 
          Length = 273

 Score = 26.6 bits (57), Expect = 9.6
 Identities = 11/31 (35%), Positives = 18/31 (57%)
 Frame = -3

Query: 371 IPLPLPPTTQEMYQEHLAMESRKKQMWKARY 401
           IP P  P+T   +QE  A  +R  ++W+ +Y
Sbjct: 238 IPPPYDPSTFPSFQEGKAYATRPVEIWEDKY 146


>TC11869 
          Length = 753

 Score = 26.6 bits (57), Expect = 9.6
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +1

Query: 153 LLIYGLILFPNLDNFVDMNAIEIFHSRNPVPTLLANMYHAIHD 195
           LL+ G  +      FV    +++ H    +PTLLA+   A+ D
Sbjct: 7   LLLPGQSVLVETSGFVIQQTLQVAHMVTVIPTLLASRVAAVSD 135


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.320    0.136    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,229,804
Number of Sequences: 28460
Number of extensions: 116177
Number of successful extensions: 690
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of query: 478
length of database: 4,897,600
effective HSP length: 94
effective length of query: 384
effective length of database: 2,222,360
effective search space: 853386240
effective search space used: 853386240
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)