BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135232.7 + phase: 0
(221 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC14917 similar to GB|AAP37839.1|30725634|BT008480 At5g64750 {Ar... 195 6e-51
TC14319 similar to UP|AP23_ARATH (P42736) AP2 domain transcripti... 107 2e-24
TC7954 similar to UP|Q7XAU4 (Q7XAU4) Ethylene responsive protein... 106 4e-24
TC15600 homologue to UP|BAD01556 (BAD01556) ERF-like protein, pa... 100 2e-22
TC13814 similar to UP|Q7XAU4 (Q7XAU4) Ethylene responsive protei... 99 6e-22
TC15981 similar to UP|ERF3_ARATH (O80339) Ethylene responsive el... 96 6e-21
TC14193 similar to UP|Q8S2S7 (Q8S2S7) Ethylene responsive elemen... 96 6e-21
TC14252 homologue to UP|Q9ZR85 (Q9ZR85) Ethylene-responsive elem... 95 1e-20
TC8031 similar to UP|Q9FR33 (Q9FR33) Ripening regulated protein ... 94 2e-20
TC9975 similar to UP|AAR15448 (AAR15448) AP2 transcription facto... 93 3e-20
TC8599 homologue to UP|Q40478 (Q40478) EREBP-4, partial (26%) 93 4e-20
TC9504 similar to UP|Q9SXS8 (Q9SXS8) Ethylene responsive element... 91 1e-19
TC10014 similar to UP|Q8LLR3 (Q8LLR3) Ethylene-responsive elemen... 91 2e-19
TC15842 homologue to GB|BAB62912.1|15207792|AB055883 ERF domain ... 91 2e-19
TC8133 similar to GB|BAA97157.1|8809606|AB018117 ethylene respon... 89 8e-19
TC19103 homologue to UP|Q7Y0Y9 (Q7Y0Y9) Dehydration responsive e... 87 2e-18
TC11381 similar to UP|Q8GZE9 (Q8GZE9) Ethylene responsive elemen... 86 4e-18
TC19692 similar to UP|Q9LYD3 (Q9LYD3) Transcription factor like ... 84 2e-17
TC16026 similar to UP|Q9SGZ3 (Q9SGZ3) F28K19.29, partial (32%) 83 4e-17
AI967551 82 7e-17
>TC14917 similar to GB|AAP37839.1|30725634|BT008480 At5g64750 {Arabidopsis
thaliana;}, partial (17%)
Length = 1051
Score = 195 bits (495), Expect = 6e-51
Identities = 123/238 (51%), Positives = 152/238 (63%), Gaps = 17/238 (7%)
Frame = +3
Query: 1 MDLILCNVGVECSSNWTNTVTTTTGRSQVEEQIYEYRTDNNNVKNEDQPKRKYRGVRQRP 60
++ +L N E SSN TNT TT S + + +YEYRT+N + E QPKRKYRGVRQRP
Sbjct: 60 LNFMLFNSVAERSSNLTNTATTKI--SPMVKPVYEYRTENVREETEQQPKRKYRGVRQRP 233
Query: 61 WGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNFPENVKLKQQQS- 119
WGKWAAEIRDPFKA RVWLGTF TAE+AA+AYDQASLRFRGNKAKLNFPENV+L QQ S
Sbjct: 234 WGKWAAEIRDPFKAARVWLGTFNTAEEAARAYDQASLRFRGNKAKLNFPENVRLLQQPSI 413
Query: 120 -TPTHLNISHSNSALLSHQPRTDPDPIVHNETL-HTLQ-----SSNKYYDYFNGQNFPMA 172
PT + S+SNS+ +PIVH E HT Q +S+ +YDY + A
Sbjct: 414 NQPT-THFSNSNSS----------EPIVHAEAQHHTFQGSSGSNSSNFYDYSPMSLYDQA 560
Query: 173 SLQTSVS----PSASYSSSYTTTTFASSFSSPQTTSSIPSGLTAWPS-----GSSPSG 221
++ ++++ S+S SSS ++ FASS SS Q S T P+ SSPSG
Sbjct: 561 NVSSTMASHHLQSSSSSSSSYSSMFASSVSSLQEVSVPSVYSTQLPAQYSVHSSSPSG 734
>TC14319 similar to UP|AP23_ARATH (P42736) AP2 domain transcription factor
RAP2.3 (Related to AP2 protein 3) (Cadmium-induced
protein AS30), partial (37%)
Length = 1130
Score = 107 bits (267), Expect = 2e-24
Identities = 53/88 (60%), Positives = 63/88 (71%), Gaps = 5/88 (5%)
Frame = +3
Query: 50 KRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNFP 109
K YRG+RQRPWGKWAAEIRDP K RVWLGTF TAE+AA+AYD+A+ R RG+KAKLNFP
Sbjct: 393 KNVYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFPTAEEAARAYDEAAKRIRGDKAKLNFP 572
Query: 110 ENVKL-----KQQQSTPTHLNISHSNSA 132
+ V KQ+ +P S S S+
Sbjct: 573 DTVAAPPPTKKQRCLSPEQPEYSSSGSS 656
>TC7954 similar to UP|Q7XAU4 (Q7XAU4) Ethylene responsive protein, partial
(75%)
Length = 1708
Score = 106 bits (264), Expect = 4e-24
Identities = 63/158 (39%), Positives = 92/158 (57%), Gaps = 14/158 (8%)
Frame = +2
Query: 50 KRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNFP 109
K +YRG+RQRPWGKWAAEIRDP K RVWLGTF TAE+AA+AYD + R RGNKAK+NFP
Sbjct: 515 KNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGNKAKVNFP 694
Query: 110 ENVKL--KQQQSTPTHLNISHSNSALLSHQPRTDPDPIVHNETLHTLQSS---------- 157
+L K+ ++ P + + +++ QP+ + N+ L + SS
Sbjct: 695 VEPQLSSKRLKANPEKQLLKGNPNSV---QPKAN-KMFDFNDNLESYFSSMDQVEQKPLV 862
Query: 158 NKYYDY--FNGQNFPMASLQTSVSPSASYSSSYTTTTF 193
N+Y + F G ++ S +A +SS +++ +F
Sbjct: 863 NQYANMSPFPGNGAQLSPFTASADVNAYFSSEHSSNSF 976
>TC15600 homologue to UP|BAD01556 (BAD01556) ERF-like protein, partial (36%)
Length = 570
Score = 100 bits (249), Expect = 2e-22
Identities = 44/62 (70%), Positives = 51/62 (81%)
Frame = +3
Query: 48 QPKRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLN 107
Q K YRG+RQRPWGKWAAEIRDP K RVWLGTF TAE+AA+AYD+ + + RG KAK+N
Sbjct: 381 QRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVN 560
Query: 108 FP 109
FP
Sbjct: 561 FP 566
>TC13814 similar to UP|Q7XAU4 (Q7XAU4) Ethylene responsive protein, partial
(20%)
Length = 535
Score = 99.0 bits (245), Expect = 6e-22
Identities = 45/61 (73%), Positives = 51/61 (82%)
Frame = +2
Query: 50 KRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNFP 109
K YRG+RQRPWGKWAAEIRDP K RV LGTF TAE+AA+AYD A+ R RG+KAKLNFP
Sbjct: 329 KNLYRGIRQRPWGKWAAEIRDPRKGVRVGLGTFNTAEEAAQAYDDAAKRIRGDKAKLNFP 508
Query: 110 E 110
+
Sbjct: 509 D 511
>TC15981 similar to UP|ERF3_ARATH (O80339) Ethylene responsive element
binding factor 3 (AtERF3), partial (45%)
Length = 671
Score = 95.5 bits (236), Expect = 6e-21
Identities = 48/90 (53%), Positives = 62/90 (68%)
Frame = +1
Query: 20 VTTTTGRSQVEEQIYEYRTDNNNVKNEDQPKRKYRGVRQRPWGKWAAEIRDPFKATRVWL 79
VTTT R +V + E + + ++RGVR+RPWG++AAEIRDP+K RVWL
Sbjct: 178 VTTTMRRGRVADPTPETK------------ETRFRGVRKRPWGRFAAEIRDPWKKARVWL 321
Query: 80 GTFETAEDAAKAYDQASLRFRGNKAKLNFP 109
GTF++AEDAA+AYD A+ FRG KAK NFP
Sbjct: 322 GTFDSAEDAARAYDAAARSFRGPKAKTNFP 411
>TC14193 similar to UP|Q8S2S7 (Q8S2S7) Ethylene responsive element binding
factor 4-like protein, partial (50%)
Length = 1128
Score = 95.5 bits (236), Expect = 6e-21
Identities = 47/95 (49%), Positives = 64/95 (66%)
Frame = +3
Query: 17 TNTVTTTTGRSQVEEQIYEYRTDNNNVKNEDQPKRKYRGVRQRPWGKWAAEIRDPFKATR 76
T TT + V + ++ NN + +RGVR+RPWG++AAEIRDP K +R
Sbjct: 87 TAAATTAAATTAVSAKSKIHKPSNNATEVH------FRGVRKRPWGRYAAEIRDPGKKSR 248
Query: 77 VWLGTFETAEDAAKAYDQASLRFRGNKAKLNFPEN 111
VWLGTF+TAE+AA+AYD A+ +FRG KAK NFP++
Sbjct: 249 VWLGTFDTAEEAARAYDAAARQFRGPKAKTNFPQS 353
>TC14252 homologue to UP|Q9ZR85 (Q9ZR85) Ethylene-responsive element binding
protein homolog, partial (47%)
Length = 1174
Score = 94.7 bits (234), Expect = 1e-20
Identities = 45/73 (61%), Positives = 57/73 (77%), Gaps = 3/73 (4%)
Frame = +1
Query: 53 YRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNFP--- 109
+RGVR+RPWG++AAEIRDP K +RVWLGTF+TAE+AA+AYD A+ FRG KAK NFP
Sbjct: 199 FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDTAAREFRGPKAKTNFPFPS 378
Query: 110 ENVKLKQQQSTPT 122
+NVK + + T
Sbjct: 379 DNVKNQSPSQSST 417
>TC8031 similar to UP|Q9FR33 (Q9FR33) Ripening regulated protein DDTFR10/A
(Fragment), partial (44%)
Length = 1109
Score = 93.6 bits (231), Expect = 2e-20
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +2
Query: 48 QPKRKYRGVRQRPWGKWAAEIRDPFK-ATRVWLGTFETAEDAAKAYDQASLRFRGNKAKL 106
+ K+ YRGVRQRPWGK+AAEIRDP K +RVWLGTF+TA +AAKAYD+A+ + RG+KA L
Sbjct: 536 EKKQHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIL 715
Query: 107 NFPENV 112
NFP +V
Sbjct: 716 NFPLDV 733
>TC9975 similar to UP|AAR15448 (AAR15448) AP2 transcription factor, partial
(41%)
Length = 865
Score = 93.2 bits (230), Expect = 3e-20
Identities = 45/60 (75%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Frame = +1
Query: 51 RKYRGVRQRPWGKWAAEIRDPF-KATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNFP 109
R+YRGVR+RPWGK+AAEIRDP K TRVWLGTF+T DAAKAYD A+ R RG KA LNFP
Sbjct: 178 RRYRGVRRRPWGKFAAEIRDPTRKGTRVWLGTFDTEIDAAKAYDYAAFRMRGRKAILNFP 357
>TC8599 homologue to UP|Q40478 (Q40478) EREBP-4, partial (26%)
Length = 632
Score = 92.8 bits (229), Expect = 4e-20
Identities = 47/106 (44%), Positives = 74/106 (69%), Gaps = 6/106 (5%)
Frame = +3
Query: 27 SQVEEQIYEYRTDNNNVKNEDQPKRK-----YRGVRQRPWGKWAAEIRDPF-KATRVWLG 80
SQ +E + +++ +++ ++ Q + + YRGVR+RPWGK+AAEIRDP K +RVWLG
Sbjct: 297 SQSKETSFSHQSSSSSSSSDHQTQEEDNNKHYRGVRRRPWGKFAAEIRDPNRKGSRVWLG 476
Query: 81 TFETAEDAAKAYDQASLRFRGNKAKLNFPENVKLKQQQSTPTHLNI 126
TF+TA +AAKAYD+A+ + RG++A LNFP V ++ + +N+
Sbjct: 477 TFDTAIEAAKAYDRAAFKMRGSRAILNFPLEVGNCHEEEESSVVNV 614
>TC9504 similar to UP|Q9SXS8 (Q9SXS8) Ethylene responsive element binding
factor, partial (35%)
Length = 633
Score = 91.3 bits (225), Expect = 1e-19
Identities = 40/58 (68%), Positives = 49/58 (83%)
Frame = +2
Query: 52 KYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNFP 109
+YRGVR+RPWG++AAEIRDP K RVWLGTF++AE+AA+AYD A+ RG KAK NFP
Sbjct: 431 RYRGVRKRPWGRFAAEIRDPMKKARVWLGTFDSAEEAARAYDAAARALRGPKAKTNFP 604
>TC10014 similar to UP|Q8LLR3 (Q8LLR3) Ethylene-responsive element binding
protein 1, partial (33%)
Length = 580
Score = 90.9 bits (224), Expect = 2e-19
Identities = 44/82 (53%), Positives = 57/82 (68%), Gaps = 1/82 (1%)
Frame = +3
Query: 51 RKYRGVRQRPWGKWAAEIRDPFK-ATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNFP 109
+++RGVR+RPWGK+AAEIRDP K RVWLGT+ET E+A AYD+A+ + RG KAKLNFP
Sbjct: 291 KRFRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETEEEAGLAYDRAAFKIRGRKAKLNFP 470
Query: 110 ENVKLKQQQSTPTHLNISHSNS 131
+ Q T + + NS
Sbjct: 471 HLIGSDTQPETASVVEAFKQNS 536
>TC15842 homologue to GB|BAB62912.1|15207792|AB055883 ERF domain protein12
{Arabidopsis thaliana;} , partial (41%)
Length = 746
Score = 90.9 bits (224), Expect = 2e-19
Identities = 41/57 (71%), Positives = 48/57 (83%)
Frame = +2
Query: 53 YRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNFP 109
YRGVR+RPWG++AAEIRDP+K TRVWLGTF+T E+AA AYD A+ RG KAK NFP
Sbjct: 185 YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGAKAKTNFP 355
>TC8133 similar to GB|BAA97157.1|8809606|AB018117 ethylene responsive
element binding factor 5 (ATERF5) {Arabidopsis
thaliana;} , partial (22%)
Length = 785
Score = 88.6 bits (218), Expect = 8e-19
Identities = 42/61 (68%), Positives = 51/61 (82%), Gaps = 1/61 (1%)
Frame = +1
Query: 50 KRKYRGVRQRPWGKWAAEIRDPFK-ATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNF 108
K+ YRGVRQRPWGK+AAEIRDP K +R+WLGTF+TA +AAK YD+A+ FRG +A LNF
Sbjct: 598 KKHYRGVRQRPWGKFAAEIRDPNKRGSRLWLGTFDTAIEAAKVYDRAAFTFRGLEAVLNF 777
Query: 109 P 109
P
Sbjct: 778 P 780
>TC19103 homologue to UP|Q7Y0Y9 (Q7Y0Y9) Dehydration responsive element
binding protein, partial (37%)
Length = 382
Score = 87.4 bits (215), Expect = 2e-18
Identities = 44/99 (44%), Positives = 62/99 (62%)
Frame = +1
Query: 12 CSSNWTNTVTTTTGRSQVEEQIYEYRTDNNNVKNEDQPKRKYRGVRQRPWGKWAAEIRDP 71
CS+N +T+TTT+ S+ +N +D+P YRG+RQR WGKW AE+R+P
Sbjct: 73 CSTN--STITTTSNSSR----------ENKRKHQQDKP---YRGIRQRKWGKWVAEVREP 207
Query: 72 FKATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNFPE 110
K +R+WLG++ + AA+AYD A RG A+LNFPE
Sbjct: 208 NKRSRIWLGSYASPVAAARAYDTAVFYLRGPSARLNFPE 324
>TC11381 similar to UP|Q8GZE9 (Q8GZE9) Ethylene responsive element binding
protein, partial (36%)
Length = 497
Score = 86.3 bits (212), Expect = 4e-18
Identities = 42/79 (53%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = +3
Query: 35 EYRTDNNNVKNEDQPKRKYRGVRQRPWGKWAAEIRDPFK-ATRVWLGTFETAEDAAKAYD 93
E ++ N + + ++ YRGVR+RPWGK+AAEIRD + RVWLGTF++AE AA AYD
Sbjct: 243 EVSSEENGCGSSPRKEKSYRGVRRRPWGKFAAEIRDSTRNGVRVWLGTFDSAEAAALAYD 422
Query: 94 QASLRFRGNKAKLNFPENV 112
QA+ RG+ A LNFP +V
Sbjct: 423 QAAFAMRGSSAILNFPVDV 479
>TC19692 similar to UP|Q9LYD3 (Q9LYD3) Transcription factor like protein,
partial (29%)
Length = 454
Score = 84.0 bits (206), Expect = 2e-17
Identities = 47/105 (44%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Frame = +3
Query: 7 NVGVECSSNWTNTVTTTTGRSQVEEQIYEYRTDNNNVKN--EDQPKRKYRGVRQRPWGKW 64
N E +SN +N+ T+ + S + ++NNN K E YRGVR R WGKW
Sbjct: 162 NSETESNSN-SNSYTSLSSSSPPQ-------SNNNNTKRNRESNTHAVYRGVRMRTWGKW 317
Query: 65 AAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNFP 109
+EIR+P K +R+WLGTF T E AA+A+D A+L +G+ A LNFP
Sbjct: 318 VSEIREPRKKSRIWLGTFCTPEMAARAHDVAALSIKGSAAILNFP 452
>TC16026 similar to UP|Q9SGZ3 (Q9SGZ3) F28K19.29, partial (32%)
Length = 1183
Score = 82.8 bits (203), Expect = 4e-17
Identities = 37/61 (60%), Positives = 47/61 (76%)
Frame = +2
Query: 42 NVKNEDQPKRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRG 101
+V N +P + YRGVRQR WGKW AEIR P TR+WLGTF+TAE+AA AYD+A+ + RG
Sbjct: 998 HVANPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRG 1177
Query: 102 N 102
+
Sbjct: 1178 D 1180
Score = 26.6 bits (57), Expect = 3.6
Identities = 16/46 (34%), Positives = 26/46 (55%)
Frame = +2
Query: 170 PMASLQTSVSPSASYSSSYTTTTFASSFSSPQTTSSIPSGLTAWPS 215
P + ++ SPS+S SSS +++ SS +S SS P+ + PS
Sbjct: 608 PTPTSTSTFSPSSSSSSSSSSSPSPSSSNSSLPCSSPPNSFYSSPS 745
>AI967551
Length = 466
Score = 82.0 bits (201), Expect = 7e-17
Identities = 40/69 (57%), Positives = 50/69 (71%), Gaps = 1/69 (1%)
Frame = +2
Query: 42 NVKNEDQPKRKYRGVRQRPWGKWAAEIRDPFK-ATRVWLGTFETAEDAAKAYDQASLRFR 100
N + + + YRGVR+RPWGK+AAEIRD + RVWLGTF++AE AA AYDQA+ R
Sbjct: 251 NEASSMEKNKAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFAMR 430
Query: 101 GNKAKLNFP 109
G+ A LNFP
Sbjct: 431 GSSATLNFP 457
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.310 0.124 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,062,012
Number of Sequences: 28460
Number of extensions: 57982
Number of successful extensions: 689
Number of sequences better than 10.0: 163
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of query: 221
length of database: 4,897,600
effective HSP length: 87
effective length of query: 134
effective length of database: 2,421,580
effective search space: 324491720
effective search space used: 324491720
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 53 (25.0 bits)
Medicago: description of AC135232.7