BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC134049.3 - phase: 0
(1113 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP063299 201 5e-52
AV777489 157 9e-39
BP057316 137 9e-33
BP057998 126 2e-29
TC12199 123 1e-28
BP084079 120 9e-28
TC18755 similar to UP|AAN85378 (AAN85378) Resistance protein (Fr... 104 9e-23
BI417698 93 3e-19
BP075523 52 3e-15
BP074539 79 3e-15
BP056393 78 9e-15
BI418116 75 6e-14
TC18765 weakly similar to UP|Q9LVT1 (Q9LVT1) Disease resistance ... 65 5e-11
BP055604 57 2e-08
AV778571 53 3e-07
TC14265 weakly similar to UP|AAN62760 (AAN62760) Disease resista... 53 3e-07
BP067300 52 5e-07
TC10205 weakly similar to UP|Q8RL77 (Q8RL77) HpaG, partial (10%) 51 9e-07
BP054702 51 1e-06
BP063158 50 3e-06
>BP063299
Length = 580
Score = 201 bits (511), Expect = 5e-52
Identities = 100/165 (60%), Positives = 117/165 (70%)
Frame = +3
Query: 294 SILVTTRLPKVAKIMGTIPHHELSRLSDEDCWELFKQRAFGPNEVQQKELVIVGKEIIKK 353
S+LV+TR VA+IMGT L LS+ DCW LFKQ AFG N ++ ELV +GKEI+KK
Sbjct: 51 SVLVSTRDMDVAEIMGTCQAQRLQGLSENDCWLLFKQYAFGANNEERAELVAIGKEIVKK 230
Query: 354 CGGFPLAAIALGSLLRFKREEKEWLYVKESKLWNLQGEAYVMPALRLSYLHLPVKLRQCF 413
CGG PLAA ALG LLR K E KEW VKES LWNL E ++PAL LSY HL LRQCF
Sbjct: 231 CGGLPLAARALGGLLRLKNEVKEWHEVKESTLWNLPDERCILPALMLSYFHLTPTLRQCF 410
Query: 414 SFCALFPKDEIISKQLLIDLWTANGFISSNQMLEADDIGNEVWNE 458
+FCA+FPKD I K+ LI LW ANGFISS + E +D+GN +W E
Sbjct: 411 AFCAIFPKDAKIIKEDLIYLWMANGFISSTKNKEVEDVGNSIWKE 545
>AV777489
Length = 451
Score = 157 bits (397), Expect = 9e-39
Identities = 86/155 (55%), Positives = 106/155 (67%), Gaps = 12/155 (7%)
Frame = +1
Query: 13 LSELIRKEISLFLGFDQEFNRLASLLTTIKATLEDAEEKQFSDSEIGRDVKDWLLKLKDA 72
LS LI+KE+ FLGFD+E RL+S LT IKATLEDAEEKQF+D R +K WL KL+DA
Sbjct: 7 LSSLIQKELGQFLGFDEELTRLSSTLTAIKATLEDAEEKQFTD----RAIKVWLQKLRDA 174
Query: 73 AYTLDDIMDECATEALEMEYKASKCGLSH------------KHIAFRYKLAKKMKRIGVW 120
A+ LDDI+DECATEAL+ME CGLS KH+ FR +AKKMK I
Sbjct: 175 AHVLDDILDECATEALKMENGGFMCGLSDKVQSSCLFSFHPKHVVFRCTIAKKMKMIRER 354
Query: 121 LDDIAAEKNKFHLTEIVRERSGVVPDWRQTTSIVT 155
LD++A E+ +FHLTE+ ++ DWRQTTSI+T
Sbjct: 355 LDEVAQERTRFHLTEMATQKRA---DWRQTTSIIT 450
>BP057316
Length = 494
Score = 137 bits (345), Expect = 9e-33
Identities = 69/163 (42%), Positives = 102/163 (62%), Gaps = 2/163 (1%)
Frame = +2
Query: 259 LRRKRYLLVLDDVWNDKQENWQRLKSVLACGGKGASILVTTRLPKVAKIMGTIPHHELSR 318
L K+YLLVLDD WN+ + W +L+ L CG +G+ +LVTTR VA+ MG H L+
Sbjct: 5 LSGKKYLLVLDDTWNESYQKWTQLRKYLMCGAQGSKVLVTTRSQIVAQTMGVQVIHVLNS 184
Query: 319 LSDEDCWELFKQRAFGPNEVQ-QKELVIVGKEIIKKCGGFPLAAIALGSLLRFKREEKEW 377
L+ E+ W L K+ F + Q + L +G++I +KC G PLA LG LL+ K EE EW
Sbjct: 185 LTLEESWGLLKKITFEDDATQVSQSLESIGEKIAEKCRGVPLAIRTLGGLLQSKSEESEW 364
Query: 378 LYVKESKLWNL-QGEAYVMPALRLSYLHLPVKLRQCFSFCALF 419
+ V + W L + E ++P L+LSY +L ++RQCF++C+L+
Sbjct: 365 MNVLQGDFWKLCEDEDSIIPVLKLSYQNLSPQIRQCFAYCSLY 493
>BP057998
Length = 566
Score = 126 bits (316), Expect = 2e-29
Identities = 71/187 (37%), Positives = 109/187 (57%), Gaps = 7/187 (3%)
Frame = +2
Query: 275 KQENWQRLKSVLACGGKGASILVTTRLPKVAKIMGTIPHHELSRLSDEDCWELFKQRA-- 332
+ + W +LK G +G+ ILVTTR +VA ++ T LS+LS+EDCW +F A
Sbjct: 14 RYDRWNQLKKPFQHGMRGSKILVTTRSDEVASVVQTGQTFNLSQLSNEDCWSVFANHACL 193
Query: 333 ---FGPNEVQQKELVIVGKEIIKKCGGFPLAAIALGSLLRFKREEKEWLYVKESKLWNL- 388
G N + ++ +G EI+KKC G PLAA +LG LLR K K+W V +W L
Sbjct: 194 FPGLGENTIALEK---IGLEIVKKCKGLPLAAQSLGGLLRRKHNIKDWNNVLNCDIWELS 364
Query: 389 QGEAYVMPALRLSYLHLPVKLRQCFSFCALFPKDEIISKQLLIDLWTANGFI-SSNQMLE 447
+ E+ ++P+LR+SY +LP L++CF++ +L+PKD K +I LW A + Q
Sbjct: 365 ESESKIIPSLRISYHYLPSYLKRCFAYFSLYPKDYEFEKNDVILLWMAEDLLPPPKQGKT 544
Query: 448 ADDIGNE 454
+++G+E
Sbjct: 545 LNEVGDE 565
>TC12199
Length = 551
Score = 123 bits (309), Expect = 1e-28
Identities = 70/168 (41%), Positives = 105/168 (61%)
Frame = +2
Query: 1 MAEAVLEIVLGSLSELIRKEISLFLGFDQEFNRLASLLTTIKATLEDAEEKQFSDSEIGR 60
MAEA+L +V +L+ L++ E + G ++ +L+ L IKA +EDAE+KQ ++ I
Sbjct: 65 MAEALLGVVFENLASLVQNEFATISGIKEKAEKLSQKLQVIKAVVEDAEKKQITNQSI-- 238
Query: 61 DVKDWLLKLKDAAYTLDDIMDECATEALEMEYKASKCGLSHKHIAFRYKLAKKMKRIGVW 120
K WL +LKDAAY LDDI+DEC+TE+ + ++ + K+I FR K+ KK+K I
Sbjct: 239 --KVWLQQLKDAAYVLDDILDECSTESHRLAGLSTL--IKPKNIMFRRKIGKKLKEITRR 406
Query: 121 LDDIAAEKNKFHLTEIVRERSGVVPDWRQTTSIVTQPLVYGRNEDKDK 168
D+IA KNKF L E R VP+ R+T + + +P +YGR E+K+K
Sbjct: 407 FDEIAEGKNKFILQESDGGRRDEVPEGRETWATIHEPELYGRQEEKEK 550
>BP084079
Length = 508
Score = 120 bits (302), Expect = 9e-28
Identities = 68/167 (40%), Positives = 99/167 (58%)
Frame = +3
Query: 1 MAEAVLEIVLGSLSELIRKEISLFLGFDQEFNRLASLLTTIKATLEDAEEKQFSDSEIGR 60
M EA+L +V +L L++ E + G + +L+ L IK LEDAE+KQ +D R
Sbjct: 27 MTEALLGVVFENLLSLVQNEFATISGIKGKAEKLSHDLDLIKGVLEDAEKKQLTD----R 194
Query: 61 DVKDWLLKLKDAAYTLDDIMDECATEALEMEYKASKCGLSHKHIAFRYKLAKKMKRIGVW 120
V WL +LKDA Y LDDI+DEC+ E+L + +S K I FR ++ ++K I
Sbjct: 195 AVMVWLQQLKDAVYVLDDILDECSIESLRLGGLSS---FKPKSIIFRREIGNRLKDITRR 365
Query: 121 LDDIAAEKNKFHLTEIVRERSGVVPDWRQTTSIVTQPLVYGRNEDKD 167
++IA K F L ++ RER V +WR+T+SI+ QP VYGR +DK+
Sbjct: 366 FEEIAERKKNFILRDVDRERQAEVAEWRETSSIIPQPKVYGRQDDKE 506
>TC18755 similar to UP|AAN85378 (AAN85378) Resistance protein (Fragment),
complete
Length = 880
Score = 104 bits (259), Expect = 9e-23
Identities = 68/244 (27%), Positives = 124/244 (49%), Gaps = 12/244 (4%)
Frame = +3
Query: 146 DWRQTTSIVTQPLVYGRNEDKDKIVDFLVGDASEQEDLSVYPIVGLGGLGKTTLAQLVFN 205
D R ++ + G + K K++ L+ ++ +SV G+GG+GKTTL + V++
Sbjct: 156 DQRGDALLLDNTDLVGIDRRKKKLMGCLIKPCPVRKVISV---TGMGGMGKTTLVKQVYD 326
Query: 206 HDKIVNHFELKIWVCVSEDFTLKRMTKAI-------IEGATKKSCEDLDLELLQRKLQDL 258
++ HF W+ VS+ + + + + I E++ + L+ ++DL
Sbjct: 327 DPVVIKHFRACAWITVSQSCEIGELLRDLARQLFSEIRRPVPLGLENMRCDRLKMIIKDL 506
Query: 259 LRRKRYLLVLDDVWNDKQENWQRLKSVLACGGKGASILVTTRLPKVAKIMGTIPH---HE 315
L+R+RYL+V DDVW+ ++ W+ +K L G+ I++TTR +A T +
Sbjct: 507 LQRRRYLVVFDDVWHVRE--WEAVKYALPDNNCGSRIMITTRRSDLAFTSSTESKGKVYN 680
Query: 316 LSRLSDEDCWELFKQRAFGPNEVQQKELVIVGKEIIKKCGGFPLAAIALGSLL--RFKRE 373
L L +++ WELF ++ F + L+ + I++KC G PLA +A+ +L + KR
Sbjct: 681 LQPLKEDEAWELFCRKTFHGDSC-PSHLIGICTYILRKCEGLPLAIVAISGVLATKDKRR 857
Query: 374 EKEW 377
EW
Sbjct: 858 IDEW 869
>BI417698
Length = 519
Score = 92.8 bits (229), Expect = 3e-19
Identities = 56/137 (40%), Positives = 78/137 (56%)
Frame = +2
Query: 1 MAEAVLEIVLGSLSELIRKEISLFLGFDQEFNRLASLLTTIKATLEDAEEKQFSDSEIGR 60
MA+A+L V L L + E++ G + +L+ L IKA +EDAEEKQ +D +
Sbjct: 89 MADALLGAVFDKLLSLAQNELATISGIKGKAQKLSRNLELIKAVVEDAEEKQITD----K 256
Query: 61 DVKDWLLKLKDAAYTLDDIMDECATEALEMEYKASKCGLSHKHIAFRYKLAKKMKRIGVW 120
+K WL LKDA Y LDDI+DEC+ E+L + A L K+I FRY++ ++K I
Sbjct: 257 PIKVWLQHLKDAVYVLDDILDECSIESLRL---AGLSSLKPKNIKFRYQIGNRLKEITSR 427
Query: 121 LDDIAAEKNKFHLTEIV 137
D+IA K K L E V
Sbjct: 428 FDEIAEGKAKLLLQERV 478
>BP075523
Length = 466
Score = 51.6 bits (122), Expect(2) = 3e-15
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = +3
Query: 99 LSHKHIAFRYKLAKKMKRIGVWLDDIAAEKNKFHLTEIVRERSGVVPDWRQTTS 152
L K+I FRY++ K+K + D+IA KNK L E VRERS V +WRQT+S
Sbjct: 303 LKPKNIKFRYEIGNKLKEMARRFDEIADCKNKLALQEGVRERSTEVAEWRQTSS 464
Score = 48.1 bits (113), Expect(2) = 3e-15
Identities = 25/63 (39%), Positives = 38/63 (59%)
Frame = +1
Query: 18 RKEISLFLGFDQEFNRLASLLTTIKATLEDAEEKQFSDSEIGRDVKDWLLKLKDAAYTLD 77
R E + G + +L+ L IKA +EDAE+K+ ++ + +K WL +LKDA Y LD
Sbjct: 79 RGEFATISGIKGKAEKLSHTLELIKAVVEDAEKKEITN----KSIKVWLQQLKDAVYVLD 246
Query: 78 DIM 80
DI+
Sbjct: 247 DIL 255
>BP074539
Length = 357
Score = 79.3 bits (194), Expect = 3e-15
Identities = 43/117 (36%), Positives = 68/117 (57%)
Frame = +1
Query: 581 LKYLRYLDISEGRFKNLPNSLCKLCNLEVLKLDGCVSLQKLPGGLTRLKRLQNLSLRDCD 640
LK+L YLD+S + LP+S C L NL++LKL C L++LP L +L L+ L
Sbjct: 4 LKHLCYLDLSHTNIEKLPDSTCLLYNLQILKLKNCRYLKELPLNLHKLTNLRYLDFSG-T 180
Query: 641 SLTSLPRQIGKLTSLNTLSKYIVGEERGFLLEELGQLNLKGQLHIKNLERLKSVTDA 697
+ +P GKL +L L+ + VG+ + +++L +LNL+G L I L+ + + DA
Sbjct: 181 QVRKMPMHFGKLKNLQVLNSFFVGQGSEYNIQQLDELNLQGTLSISELQNIINPLDA 351
Score = 39.3 bits (90), Expect = 0.003
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Frame = +1
Query: 917 HSKLKMLPTEMIHIHALQQLYINDCRNIEELPNEVMQRLHSLKELDIVGCDKLKLSSDF- 975
H+ ++ LP ++ LQ L + +CR ++ELP + +L +L+ LD G K+ F
Sbjct: 34 HTNIEKLPDSTCLLYNLQILKLKNCRYLKELPLN-LHKLTNLRYLDFSGTQVRKMPMHFG 210
Query: 976 --QYLTCLETLAIGSCSEVEGFHEALQHMTTLKSLTLSDLPNL 1016
+ L L + +G SE + L + +L++S+L N+
Sbjct: 211 KLKNLQVLNSFFVGQGSEYN--IQQLDELNLQGTLSISELQNI 333
>BP056393
Length = 421
Score = 77.8 bits (190), Expect = 9e-15
Identities = 38/96 (39%), Positives = 60/96 (61%), Gaps = 1/96 (1%)
Frame = +1
Query: 346 VGKEIIKKCGGFPLAAIALGSLLRFKREEKEWLYVKESKLWNL-QGEAYVMPALRLSYLH 404
+G++I+K+C G PL A +LG LLR K + ++ + S +W L + E+ ++ ALR+SY +
Sbjct: 121 IGRQIVKRCKGSPLXAQSLGGLLRGKHDIRDXNNILNSNIWELPENESNIILALRISYHY 300
Query: 405 LPVKLRQCFSFCALFPKDEIISKQLLIDLWTANGFI 440
LP L++C +C+LFPKD LI LW A +
Sbjct: 301 LPPHLKRCXVYCSLFPKDYKFDXDELILLWMAEDLL 408
>BI418116
Length = 584
Score = 75.1 bits (183), Expect = 6e-14
Identities = 53/180 (29%), Positives = 83/180 (45%), Gaps = 8/180 (4%)
Frame = +2
Query: 3 EAVLEIVLGSLSELIRKEISLFLGFDQEFNRLASLLTTIKATLEDAEEKQFSDSEIGRDV 62
EA+ ++L LS KE + + R+ + ++ IKA L DAE K ++ +
Sbjct: 38 EAIACLILEKLSSSAIKEFGIIWNLKDDLQRMKNTVSAIKAVLRDAEAKATTNHQ----T 205
Query: 63 KDWLLKLKDAAYTLDDIMDECATEALEMEY--------KASKCGLSHKHIAFRYKLAKKM 114
+WL +LKD Y DD++D+ +TE L+ + K IA KL M
Sbjct: 206 SNWLEELKDVLYDADDLLDDLSTEDLKRQVMIGNKFVRKLQIFFSKSNQIAHGLKLGHNM 385
Query: 115 KRIGVWLDDIAAEKNKFHLTEIVRERSGVVPDWRQTTSIVTQPLVYGRNEDKDKIVDFLV 174
K I L DIA K L++ E + RQT S V++ V GR ++K + +L+
Sbjct: 386 KAIQKRLHDIANNKQALQLSDHPVETPTAYREQRQTYSFVSKDEVIGREDEKTLLTSYLL 565
>TC18765 weakly similar to UP|Q9LVT1 (Q9LVT1) Disease resistance
protein-like, partial (18%)
Length = 688
Score = 65.5 bits (158), Expect = 5e-11
Identities = 65/236 (27%), Positives = 111/236 (46%), Gaps = 6/236 (2%)
Frame = +2
Query: 196 KTTLAQLVFNHDKIVNHFELKI-WVCVSEDFTLKRMTKAIIEGATKKSCEDLDLELLQRK 254
KTTLA+ V D++ HF+ +I ++ VS+ ++ + I + + + Q
Sbjct: 2 KTTLAREVCRDDQVRCHFKERILFLTVSQSPNVEELRAKIFGHIMGNRGLNANYAVPQWM 181
Query: 255 LQ-DLLRRKRYLLVLDDVWNDKQENWQRLKSVLACGGKGASILVTTRLPKVAKIMGTIPH 313
Q + + + L+VLDDVW+ + L G LV +R K +I
Sbjct: 182 PQFECQSQSQILVVLDDVWS------LPVLEQLVLRVPGCKYLVVSRF-KFQRIFNDT-- 334
Query: 314 HELSRLSDEDCWELFKQRAFGPNEVQQKELVIVGKEIIKKCGGFPLAAIALGSLLRFKRE 373
+++ LS+ D LF AFG + + K+++ +CG PLA +G+ LR +
Sbjct: 335 YDVELLSEGDALSLFCHHAFGHKSIPFGANQNLIKQVVAECGRLPLALKVIGASLR-DQN 511
Query: 374 EKEWLYVKESKLWNLQ-GEAY---VMPALRLSYLHLPVKLRQCFSFCALFPKDEII 425
E WL VK L GE+Y ++ + +S +LP K+++CF FP+D+ I
Sbjct: 512 EMFWLSVKTRLSQGLSIGESYEVNLIDRMAISTNYLPEKVKECFLDLCAFPEDKKI 679
>BP055604
Length = 464
Score = 56.6 bits (135), Expect = 2e-08
Identities = 26/59 (44%), Positives = 35/59 (59%)
Frame = -3
Query: 1029 LHEINIYSCPKLACLPTSIQQISGLEILSIHDCSKLEKRCQKEIGEDWPKIVHVQYIEI 1087
L + I+ CP L LP Q +S LE L I C +L++RC++ GEDW KI HV + I
Sbjct: 444 LRYLRIWGCPGLRSLPDGFQHLSALERLIIEGCPELKERCKEGTGEDWDKIAHVPDVYI 268
Score = 34.3 bits (77), Expect = 0.11
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -3
Query: 955 LHSLKELDIVGCDKLK-LSSDFQYLTCLETLAIGSCSEVE 993
LHSL+ L I GC L+ L FQ+L+ LE L I C E++
Sbjct: 453 LHSLRYLRIWGCPGLRSLPDGFQHLSALERLIIEGCPELK 334
>AV778571
Length = 452
Score = 52.8 bits (125), Expect = 3e-07
Identities = 36/103 (34%), Positives = 54/103 (51%)
Frame = +3
Query: 955 LHSLKELDIVGCDKLKLSSDFQYLTCLETLAIGSCSEVEGFHEALQHMTTLKSLTLSDLP 1014
L+ L+ LDI GC K++ + L LE L + CS +E F E L M + + + P
Sbjct: 153 LNKLRILDIEGCCKIRTFPPMK-LASLEELYLSHCSSLESFPEILAKMENITLIGVYHTP 329
Query: 1015 NLEYLPECIGNLTLLHEINIYSCPKLACLPTSIQQISGLEILS 1057
++ LP IGNLT L + ++ C L LP+ + + LE LS
Sbjct: 330 -IKELPSSIGNLTRLRRLELHGCGMLQ-LPSGMAM*TELEELS 452
Score = 42.7 bits (99), Expect = 3e-04
Identities = 35/106 (33%), Positives = 48/106 (45%)
Frame = +3
Query: 559 NCYSLRVLLSHRLNNLSSSIGRLKYLRYLDISEGRFKNLPNSLCKLCNLEVLKLDGCVSL 618
N L + S L + S+G L LR LDI EG K KL +LE L L C SL
Sbjct: 87 NLEKLSFVYSENLIKIHESVGFLNKLRILDI-EGCCKIRTFPPMKLASLEELYLSHCSSL 263
Query: 619 QKLPGGLTRLKRLQNLSLRDCDSLTSLPRQIGKLTSLNTLSKYIVG 664
+ P L +++ + + + + LP IG LT L L + G
Sbjct: 264 ESFPEILAKMENITLIGVYH-TPIKELPSSIGNLTRLRRLELHGCG 398
Score = 34.3 bits (77), Expect = 0.11
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 20/117 (17%)
Frame = +3
Query: 845 ITECPNLLGLPCLPSLSDLYIQ---------GKYNQQLPSSIH-----------KLGSLE 884
IT+ P+L GLP L LS +Y + G N+ I KL SLE
Sbjct: 54 ITQIPDLSGLPNLEKLSFVYSENLIKIHESVGFLNKLRILDIEGCCKIRTFPPMKLASLE 233
Query: 885 SLHFSDNEELIYFPDGILRNLASPLKTLGFHRHSKLKMLPTEMIHIHALQQLYINDC 941
L+ S L FP+ IL + + + +G + H+ +K LP+ + ++ L++L ++ C
Sbjct: 234 ELYLSHCSSLESFPE-ILAKMEN-ITLIGVY-HTPIKELPSSIGNLTRLRRLELHGC 395
Score = 30.4 bits (67), Expect = 1.6
Identities = 34/128 (26%), Positives = 57/128 (43%), Gaps = 13/128 (10%)
Frame = +3
Query: 772 DCKSCLNLPELWKLPSLKYLKLSNMIHVIYLFHES---------YDGEGLMALKTLFLEK 822
+C+S +P+L LP+L+ L ++I + HES D EG ++T K
Sbjct: 42 ECESITQIPDLSGLPNLEKLSFVYSENLIKI-HESVGFLNKLRILDIEGCCKIRTFPPMK 218
Query: 823 LPNLIGLSREERVMFPRLKALEITECPNLLGLP-CLPSLSDLYIQGKYN---QQLPSSIH 878
L + L+ L ++ C +L P L + ++ + G Y+ ++LPSSI
Sbjct: 219 LAS--------------LEELYLSHCSSLESFPEILAKMENITLIGVYHTPIKELPSSIG 356
Query: 879 KLGSLESL 886
L L L
Sbjct: 357 NLTRLRRL 380
>TC14265 weakly similar to UP|AAN62760 (AAN62760) Disease resistance
protein-like protein MsR1, partial (5%)
Length = 766
Score = 52.8 bits (125), Expect = 3e-07
Identities = 26/56 (46%), Positives = 37/56 (65%)
Frame = +1
Query: 603 KLCNLEVLKLDGCVSLQKLPGGLTRLKRLQNLSLRDCDSLTSLPRQIGKLTSLNTL 658
KL NLE+L+L C L+ LP + RL +L+ L + +C SL SLP +IG L +L +L
Sbjct: 13 KLENLELLRLSSCTDLKGLPDSIGRLSKLRLLDISNCISLPSLPEEIGNLCNLKSL 180
Score = 47.0 bits (110), Expect = 2e-05
Identities = 31/109 (28%), Positives = 56/109 (50%), Gaps = 1/109 (0%)
Frame = +1
Query: 981 LETLAIGSCSEVEGFHEALQHMTTLKSLTLSDLPNLEYLPECIGNLTLLHEINIYSCPKL 1040
LE L + SC++++G +++ ++ L+ L +S+ +L LPE IGNL L + + SC
Sbjct: 25 LELLRLSSCTDLKGLPDSIGRLSKLRLLDISNCISLPSLPEEIGNLCNLKSLYMTSCAGC 204
Query: 1041 ACLPTSIQQISGLEILSIHDCSKLEKRCQKEIGEDWPKIVHV-QYIEIE 1088
LP+SI + L ++ C +E W +V +++IE
Sbjct: 205 E-LPSSIVNLQNLTVV-----------CDEETAASWEAFEYVIPHLKIE 315
Score = 41.6 bits (96), Expect = 7e-04
Identities = 33/87 (37%), Positives = 43/87 (48%), Gaps = 1/87 (1%)
Frame = +1
Query: 559 NCYSLRVLLSHRLNNLSSSIGRLKYLRYLDISEG-RFKNLPNSLCKLCNLEVLKLDGCVS 617
N LR+ L L SIGRL LR LDIS +LP + LCNL+ L + C
Sbjct: 22 NLELLRLSSCTDLKGLPDSIGRLSKLRLLDISNCISLPSLPEEIGNLCNLKSLYMTSCAG 201
Query: 618 LQKLPGGLTRLKRLQNLSLRDCDSLTS 644
+ LP + LQNL++ CD T+
Sbjct: 202 CE-LPSSIV---NLQNLTV-VCDEETA 267
>BP067300
Length = 523
Score = 52.0 bits (123), Expect = 5e-07
Identities = 28/72 (38%), Positives = 38/72 (51%), Gaps = 1/72 (1%)
Frame = -2
Query: 1017 EYLPE-CIGNLTLLHEINIYSCPKLACLPTSIQQISGLEILSIHDCSKLEKRCQKEIGED 1075
+YL E + LT L + I CPKL C+P + + L I +LE+RC+ ED
Sbjct: 522 KYLDEDSLQKLTSLETLGIACCPKLQCMPAKLP--CSISTLHIVRSPRLEERCRGRKSED 349
Query: 1076 WPKIVHVQYIEI 1087
WPKI H+ I I
Sbjct: 348 WPKIAHIPMIRI 313
>TC10205 weakly similar to UP|Q8RL77 (Q8RL77) HpaG, partial (10%)
Length = 586
Score = 51.2 bits (121), Expect = 9e-07
Identities = 31/89 (34%), Positives = 45/89 (49%)
Frame = +3
Query: 597 LPNSLCKLCNLEVLKLDGCVSLQKLPGGLTRLKRLQNLSLRDCDSLTSLPRQIGKLTSLN 656
LP S+ L ++ L + C+SL LP + LK+L+ L++R C LT LP I L
Sbjct: 9 LPKSITNLEQVQFLDISDCISLSHLPEDMGELKKLEKLNVRGCSRLTELPTSI---MDLE 179
Query: 657 TLSKYIVGEERGFLLEELGQLNLKGQLHI 685
L + EE L E + Q+ QLH+
Sbjct: 180 NLEEVECDEEIAELWEPVQQILSDLQLHV 266
Score = 49.7 bits (117), Expect = 3e-06
Identities = 26/86 (30%), Positives = 45/86 (52%)
Frame = +3
Query: 997 EALQHMTTLKSLTLSDLPNLEYLPECIGNLTLLHEINIYSCPKLACLPTSIQQISGLEIL 1056
+++ ++ ++ L +SD +L +LPE +G L L ++N+ C +L LPTSI + LE
Sbjct: 15 KSITNLEQVQFLDISDCISLSHLPEDMGELKKLEKLNVRGCSRLTELPTSIMDLENLE-- 188
Query: 1057 SIHDCSKLEKRCQKEIGEDWPKIVHV 1082
E C +EI E W + +
Sbjct: 189 --------EVECDEEIAELWEPVQQI 242
>BP054702
Length = 528
Score = 50.8 bits (120), Expect = 1e-06
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Frame = -3
Query: 968 KLKLSSDFQYLTCLETLAIGSCSEVEGFHEALQHMTTLKSLTLSDLPNLEYLPECIGN-- 1025
K + S F +LT L L + + + + L+ SL L N L GN
Sbjct: 508 KHEFGSQFPHLTSLSHLYVFGFGDQDLMNTLLKERLLPTSLVFLGLYNFSSLKFLEGNGL 329
Query: 1026 --LTLLHEINIYSCPKLACLPTSIQQISGLEILSIHDCSKLEKRCQKEIGEDWPKIVHVQ 1083
L+ LH+++I CP L LP Q L +L++ C LE R + G+ W K+ +
Sbjct: 328 QHLSSLHQLHIDKCPSLVSLPED-QLPHSLAVLNLEKCPLLEARYRIRKGKHWSKVSRIP 152
Query: 1084 YIEIENDNLI 1093
I+I + +I
Sbjct: 151 VIKINEEVII 122
Score = 38.5 bits (88), Expect = 0.006
Identities = 35/117 (29%), Positives = 53/117 (44%), Gaps = 1/117 (0%)
Frame = -3
Query: 855 PCLPSLSDLYIQGKYNQQLPSSIHKLGSLESLHFSDNEELIYFPDGILRNLASPLKTLGF 914
P L SLS LY+ G +Q L +++ K R L + L LG
Sbjct: 484 PHLTSLSHLYVFGFGDQDLMNTLLK----------------------ERLLPTSLVFLGL 371
Query: 915 HRHSKLKMLP-TEMIHIHALQQLYINDCRNIEELPNEVMQRLHSLKELDIVGCDKLK 970
+ S LK L + H+ +L QL+I+ C ++ LP + Q HSL L++ C L+
Sbjct: 370 YNFSSLKFLEGNGLQHLSSLHQLHIDKCPSLVSLPED--QLPHSLAVLNLEKCPLLE 206
>BP063158
Length = 431
Score = 49.7 bits (117), Expect = 3e-06
Identities = 34/90 (37%), Positives = 49/90 (53%), Gaps = 3/90 (3%)
Frame = -1
Query: 1004 TLKSLTLSDLPNLEYLP-ECIGNLTLLHEINIYSCPKLACLPTS--IQQISGLEILSIHD 1060
+L L +S PNL+ L + +L L E+ + C L CLP + IS L I +
Sbjct: 404 SLHYLDISHFPNLKKLDYRGLCHLPSLTELRLSDCSGLPCLPEEGLPKSISTLSIRRM-- 231
Query: 1061 CSKLEKRCQKEIGEDWPKIVHVQYIEIEND 1090
C L++RCQK GEDW KI H + I I+++
Sbjct: 230 CPLLKQRCQKPHGEDWGKISHSKLIFIDHE 141
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.320 0.138 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,181,699
Number of Sequences: 28460
Number of extensions: 291012
Number of successful extensions: 1570
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 1496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1542
length of query: 1113
length of database: 4,897,600
effective HSP length: 100
effective length of query: 1013
effective length of database: 2,051,600
effective search space: 2078270800
effective search space used: 2078270800
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Medicago: description of AC134049.3