BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC134049.18 - phase: 0
(166 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CB828263 156 2e-39
AV406755 137 7e-34
AV779547 130 9e-32
TC13186 weakly similar to UP|Q8W2C0 (Q8W2C0) Functional candidat... 121 7e-29
BP045440 112 2e-26
TC19146 similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-contain... 103 2e-23
BP065014 93 2e-20
BP065724 74 1e-14
AV406565 70 2e-13
AI967395 67 2e-12
TC15876 weakly similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-... 55 5e-09
BP068235 46 7e-08
TC12592 52 7e-08
AV408271 49 4e-07
TC9932 weakly similar to UP|Q93YA7 (Q93YA7) Resistance gene-like... 48 8e-07
TC20188 weakly similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-... 45 5e-06
BP070696 42 7e-05
BP083121 28 0.62
TC15419 similar to UP|Q9M0V3 (Q9M0V3) UV-damaged DNA binding fac... 27 2.4
NP459444 rac GTPase activating protein 3 [Lotus japonicus] 26 3.1
>CB828263
Length = 570
Score = 156 bits (395), Expect = 2e-39
Identities = 75/112 (66%), Positives = 93/112 (82%)
Frame = +2
Query: 55 NLNSGDEISTTLVRAIEEAELSVIVFSKNYAASKFCLDELMKILECKRMKGKMVVPIFYD 114
+L GDEIS++L+RAIEEA+LSVIVFSKNY SK+CLDEL+KILECKR +G++V+P+FYD
Sbjct: 5 DLQRGDEISSSLLRAIEEAKLSVIVFSKNYGNSKWCLDELVKILECKRTRGQIVLPVFYD 184
Query: 115 VDPTDVRNQRGSYAEAFAKHEKNSEEKIKVQEWRNGLMEAANYSGWDCNVNR 166
+DP+ VRNQ G+YAEAF KH + KVQ+WR L EAAN SGWDC+VNR
Sbjct: 185 IDPSHVRNQTGTYAEAFVKHGQVD----KVQKWREALREAANLSGWDCSVNR 328
>AV406755
Length = 425
Score = 137 bits (346), Expect = 7e-34
Identities = 60/114 (52%), Positives = 91/114 (79%)
Frame = +3
Query: 20 HEVFISFRSEDTRNNFTSHLNGALKRLDIRTYIDNNLNSGDEISTTLVRAIEEAELSVIV 79
++VF+SFR E++R +FTSHL ALK I+ ++DN L G++IS++L++AIE++ +++I+
Sbjct: 84 YDVFLSFRGEESRRSFTSHLYTALKNAGIKVFMDNELQRGEDISSSLLKAIEDSRIAIII 263
Query: 80 FSKNYAASKFCLDELMKILECKRMKGKMVVPIFYDVDPTDVRNQRGSYAEAFAK 133
FS NY SK+CLDEL KI+EC+R G+ V+P+FY+VDP+D+R QRG+ EAF K
Sbjct: 264 FSTNYTGSKWCLDELEKIIECQRTIGQEVMPVFYNVDPSDIRKQRGTVGEAFRK 425
>AV779547
Length = 556
Score = 130 bits (328), Expect = 9e-32
Identities = 69/140 (49%), Positives = 93/140 (66%), Gaps = 2/140 (1%)
Frame = +1
Query: 24 ISFRSEDTRNNFTSHLNGALKRLDIRTYIDNN-LNSGDEISTTLVRAIEEAELSVIVFSK 82
+SFR EDTRNNFT HL GAL T+ D+ L G IST L++AIE +++ ++VFSK
Sbjct: 109 VSFRGEDTRNNFTDHLLGALYGKGFVTFKDDTMLRKGKNISTELIQAIEGSQILIVVFSK 288
Query: 83 NYAASKFCLDELMKILECKRMKGKMVVPIFYDVDPTDVRNQRGSYAEAFAKHEKNSEEKI 142
YA+S +CL EL KI + K + V+P+ DV P++VR Q G+Y EAF KHE+ +E +
Sbjct: 289 YYASSTWCLQELAKIADGIVGKRQTVLPVVCDVTPSEVRKQSGNYGEAFLKHEERFKEDL 468
Query: 143 K-VQEWRNGLMEAANYSGWD 161
+ VQ WR L E A+ SGWD
Sbjct: 469 EMVQRWRKALAEVADLSGWD 528
>TC13186 weakly similar to UP|Q8W2C0 (Q8W2C0) Functional candidate
resistance protein KR1, partial (6%)
Length = 586
Score = 121 bits (303), Expect = 7e-29
Identities = 61/139 (43%), Positives = 94/139 (66%), Gaps = 2/139 (1%)
Frame = +1
Query: 20 HEVFISFRSEDTRNNFTSHLNGALKRLDIRTYIDNNLNSGDEISTTL-VRAIEEAELSVI 78
++VFIS + DTR F+ L AL I T+ID+ L D+I +T+ +AIE + ++++
Sbjct: 103 YDVFISLITSDTRFGFSGDLYTALSDKGILTFIDDGLPRPDDIMSTVNSKAIESSRIAIV 282
Query: 79 VFSKNYAASKFCLDELMKILECKRMKGKMVVPIFYDVDPTDVRNQRGSYAEAFAKHEKN- 137
V S+NYA+S FCLDELM IL+ + KG ++ P+FY V+P+DVR Q+G + +AFA HE+
Sbjct: 283 VISENYASSSFCLDELMYILKRREEKGLLIWPVFYQVEPSDVRYQKGGFGKAFASHEERF 462
Query: 138 SEEKIKVQEWRNGLMEAAN 156
+ KV++WRN L + A+
Sbjct: 463 GSDSAKVRKWRNALKQVAD 519
>BP045440
Length = 535
Score = 112 bits (281), Expect = 2e-26
Identities = 59/145 (40%), Positives = 88/145 (60%), Gaps = 2/145 (1%)
Frame = -3
Query: 19 KHEVFISFRSEDTRNNFTSHLNGALKRLDIRTYIDNNLNSGDEISTTLVRAIEEAELSVI 78
++++FISFR DTR++FT L L R T+ D+ G L+ IEE+ ++I
Sbjct: 530 RYQIFISFRGMDTRDDFTKPLYQGLCREGFVTFKDDESLEGGSPIEKLLDDIEESRFAII 351
Query: 79 VFSKNYAASKFCLDELMKILECKRMKGK--MVVPIFYDVDPTDVRNQRGSYAEAFAKHEK 136
+ SKNYA S++CL EL KILECK +GK +V+P +V PT+VR+ YA+A AKHEK
Sbjct: 350 ILSKNYAESEWCLKELSKILECKDQEGKNQLVLPSSTEVTPTEVRHVINRYADAMAKHEK 171
Query: 137 NSEEKIKVQEWRNGLMEAANYSGWD 161
N + +Q W+ L + +G++
Sbjct: 170 NGIDSKTIQAWKKALFDVCTLTGFE 96
>TC19146 similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-containing protein
TSDC, partial (12%)
Length = 701
Score = 103 bits (256), Expect = 2e-23
Identities = 54/127 (42%), Positives = 83/127 (64%), Gaps = 2/127 (1%)
Frame = +1
Query: 42 ALKRLDIRTYIDNN-LNSGDEISTTLVRAIEEAELSVIVFSKNYAASKFCLDELMKILEC 100
AL+R +T++D+ L G+EI+ +L+ A E++ LS+IVFS+NY S +CLDEL+KI+EC
Sbjct: 10 ALRREGFKTFMDDEGLVGGNEIAKSLLDASEKSRLSIIVFSENYGYSSWCLDELVKIVEC 189
Query: 101 KRMKGKMVVPIFYDVDPTDVRNQRGSYAEAFAKHEKN-SEEKIKVQEWRNGLMEAANYSG 159
K ++V PIFY V+ +DV +Q SY A HEKN ++ +V++WR+ L A G
Sbjct: 190 METKKQLVWPIFYKVEKSDVTSQENSYEHAMIGHEKNYGKDSDEVKKWRSALSAMAKLEG 369
Query: 160 WDCNVNR 166
+ N+
Sbjct: 370 HNVKENK 390
>BP065014
Length = 498
Score = 93.2 bits (230), Expect = 2e-20
Identities = 46/108 (42%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Frame = -2
Query: 53 DNNLNSGDEISTTLVRAIEEAELSVIVFSKNYAASKFCLDELMKILECKRMKGKMVVPIF 112
D +L G I L+ AIEE+ ++++V S+N+A SK+CL EL+KIL+C++ K +V+PIF
Sbjct: 488 DLSLEDGAPIEE-LLGAIEESRVAIVVLSENFADSKWCLKELVKILDCRKKKKPLVLPIF 312
Query: 113 YDVDPTDVRNQRGSYAEAFAKHEKN-SEEKIKVQEWRNGLMEAANYSG 159
Y V+PT++R+ +G Y EA A+HEK ++ V+EW L + + G
Sbjct: 311 YKVEPTNIRHLKGRYGEAMAEHEKKLGKDSQTVREWTQALSDISYLKG 168
>BP065724
Length = 495
Score = 74.3 bits (181), Expect = 1e-14
Identities = 35/83 (42%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Frame = -1
Query: 84 YAASKFCLDELMKILECKRMKGKMVVPIFYDVDPTDVRNQRGSYAEAFAKHE-KNSEEKI 142
YA S +CL+E++KILECK+ ++V PIFY V+P+DVR+QR SY +A K E + ++
Sbjct: 495 YADSSWCLEEVVKILECKQKNDQLVWPIFYKVEPSDVRHQRNSYEKAMIKQETRYGKDSE 316
Query: 143 KVQEWRNGLMEAANYSGWDCNVN 165
KV++WR+ L + + + N
Sbjct: 315 KVKKWRSSLSQVCDLKAFHYKEN 247
>AV406565
Length = 207
Score = 69.7 bits (169), Expect = 2e-13
Identities = 34/62 (54%), Positives = 43/62 (68%)
Frame = +2
Query: 1 MAWSYSSSTSSSNNTPQEKHEVFISFRSEDTRNNFTSHLNGALKRLDIRTYIDNNLNSGD 60
MAWS +SS++ PQ+KH+VF+SFR EDTR T HL L RL ++TYID +L GD
Sbjct: 35 MAWSTTSSSA-----PQQKHDVFLSFRGEDTRYTCTGHLQATLTRLQVKTYIDYDLQRGD 199
Query: 61 EI 62
EI
Sbjct: 200EI 205
>AI967395
Length = 205
Score = 67.0 bits (162), Expect = 2e-12
Identities = 29/67 (43%), Positives = 48/67 (71%)
Frame = +3
Query: 70 IEEAELSVIVFSKNYAASKFCLDELMKILECKRMKGKMVVPIFYDVDPTDVRNQRGSYAE 129
I+E+ L ++VFS++YA S CL+EL+ I++ M ++V P++Y V+ ++R+QRG Y E
Sbjct: 3 IQESRLIIVVFSEHYAVSASCLNELVNIVDVMIMNNQLVWPVYYGVEAPEIRHQRGRYGE 182
Query: 130 AFAKHEK 136
A AK E+
Sbjct: 183 AMAKFEE 203
>TC15876 weakly similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-containing
protein TSDC, partial (13%)
Length = 558
Score = 55.5 bits (132), Expect = 5e-09
Identities = 27/70 (38%), Positives = 43/70 (60%), Gaps = 1/70 (1%)
Frame = +1
Query: 97 ILECKRMKGKMVVPIFYDVDPTDVRNQRGSYAEAFAKHE-KNSEEKIKVQEWRNGLMEAA 155
ILEC + ++V PIFY V+P+DVR+QR SY +A K E + ++ KV++WR+ L +
Sbjct: 16 ILECXQKNDQLVWPIFYKVEPSDVRHQRNSYEKAMIKPETRYGKDSEKVKKWRSSLSQVC 195
Query: 156 NYSGWDCNVN 165
+ + N
Sbjct: 196 DLKAFHYKEN 225
>BP068235
Length = 511
Score = 45.8 bits (107), Expect(2) = 7e-08
Identities = 22/63 (34%), Positives = 37/63 (57%), Gaps = 2/63 (3%)
Frame = -1
Query: 91 LDELMKILECKRMKGKMVVPIFYDVDPTDVRNQRGSYAEAFA--KHEKNSEEKIKVQEWR 148
L L + LECK+MK +++ P Y V+P+D+R + SY A A + + + K+Q W+
Sbjct: 475 LMNLSRFLECKKMKNQLLWPCPYKVEPSDIRYRPSSYGTALA*TRTDAFGNDSEKIQTWK 296
Query: 149 NGL 151
+ L
Sbjct: 295 SAL 287
Score = 25.4 bits (54), Expect(2) = 7e-08
Identities = 11/17 (64%), Positives = 14/17 (81%)
Frame = -3
Query: 81 SKNYAASKFCLDELMKI 97
S+NYA S CLDEL++I
Sbjct: 506 SENYAYSARCLDELVQI 456
>TC12592
Length = 534
Score = 51.6 bits (122), Expect = 7e-08
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +3
Query: 106 KMVVPIFYDVDPTDVRNQRGSYAEAFAKHE-KNSEEKIKVQEWRNGLMEAANYSGWDCNV 164
++V+P+FY V+PTD+RN +G + EA A+ E K ++ + EW+ L + + G C+V
Sbjct: 3 QLVLPVFYGVEPTDIRNLKGKFGEAMAEIENKFGKDSNTIHEWKQALRDISYLKGEPCHV 182
Query: 165 N 165
+
Sbjct: 183 S 185
>AV408271
Length = 409
Score = 48.9 bits (115), Expect = 4e-07
Identities = 21/46 (45%), Positives = 31/46 (66%)
Frame = +1
Query: 17 QEKHEVFISFRSEDTRNNFTSHLNGALKRLDIRTYIDNNLNSGDEI 62
+EK++VF+SFR ED R+ F SHL A ++ I ++D+ L G EI
Sbjct: 271 EEKYDVFVSFRGEDIRDGFLSHLADAFRQKKINAFMDDKLKRGQEI 408
>TC9932 weakly similar to UP|Q93YA7 (Q93YA7) Resistance gene-like, partial
(5%)
Length = 689
Score = 48.1 bits (113), Expect = 8e-07
Identities = 26/64 (40%), Positives = 40/64 (61%), Gaps = 1/64 (1%)
Frame = -2
Query: 8 STSSSNNTPQEKHEVFISFRSEDTRNNFTSHLNGALKRLDIRTYIDN-NLNSGDEISTTL 66
S SSS++ Q ++VFI+FR +DTR++F SHL AL + ++D+ NL G E+ L
Sbjct: 238 SMSSSSSNHQWIYDVFINFRGKDTRHSFVSHLYTALSNAGVNVFLDDENLERGLELEPEL 59
Query: 67 VRAI 70
+ I
Sbjct: 58 QKLI 47
>TC20188 weakly similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-containing
protein TSDC, partial (11%)
Length = 494
Score = 45.4 bits (106), Expect = 5e-06
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 106 KMVVPIFYDVDPTDVRNQRGSYAEAFAKHEKN-SEEKIKVQEWRNGLMEAANYSG 159
++V PIFY++ +DV NQ SY A HE + ++ KVQ+W++ L E A G
Sbjct: 4 QLVWPIFYEISXSDVSNQTKSYGHAMLAHENSFGKDSEKVQKWKSALSEMAFLQG 168
>BP070696
Length = 429
Score = 41.6 bits (96), Expect = 7e-05
Identities = 19/55 (34%), Positives = 33/55 (59%), Gaps = 1/55 (1%)
Frame = -1
Query: 98 LECKRMKGKMVVPIFYDVDPTDVRNQRGSYAEAFAKHE-KNSEEKIKVQEWRNGL 151
LECK+ K ++ PIF +++ + Q SY + HE KN +E +V++W++ L
Sbjct: 429 LECKKKKNNIIRPIFQNMELLKIIYQINSYDDVMVAHERKNGKESDRVKKWKSAL 265
>BP083121
Length = 527
Score = 28.5 bits (62), Expect = 0.62
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -1
Query: 116 DPTDVRNQRGSYAEAFAKHEKNSEE 140
DPTDVR+Q+ SY +A K K E+
Sbjct: 527 DPTDVRHQKNSYGQARKKVWKRFEK 453
>TC15419 similar to UP|Q9M0V3 (Q9M0V3) UV-damaged DNA binding factor-like
protein, partial (9%)
Length = 555
Score = 26.6 bits (57), Expect = 2.4
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 20 HEVFISFRSEDTRNNFTSHLNGALKRLDIRTYIDNNLNSGDEISTTLVRAIEE 72
HE + SF E + L+G L I +++D N + DE+S L ++EE
Sbjct: 97 HEPWRSFNHEKKTAEARNFLDGDL----IESFLDLNRSKMDEVSKALDVSVEE 243
>NP459444 rac GTPase activating protein 3 [Lotus japonicus]
Length = 1300
Score = 26.2 bits (56), Expect = 3.1
Identities = 20/76 (26%), Positives = 35/76 (45%), Gaps = 5/76 (6%)
Frame = +2
Query: 5 YSSSTSSSNNTPQEKH-----EVFISFRSEDTRNNFTSHLNGALKRLDIRTYIDNNLNSG 59
YSS +S S++ E E++ S ++++ H+N +N+LNS
Sbjct: 824 YSSMSSHSSDRQSEDEYDSQLEMYTSAELRGSQSDCDDHVN------------NNSLNSE 967
Query: 60 DEISTTLVRAIEEAEL 75
+E+ + V IEE L
Sbjct: 968 EEVDSASVSEIEECFL 1015
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.314 0.128 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,619,875
Number of Sequences: 28460
Number of extensions: 27846
Number of successful extensions: 140
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of query: 166
length of database: 4,897,600
effective HSP length: 83
effective length of query: 83
effective length of database: 2,535,420
effective search space: 210439860
effective search space used: 210439860
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 52 (24.6 bits)
Medicago: description of AC134049.18