BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC131455.1 + phase: 0
(773 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC19422 weakly similar to UP|Q945L7 (Q945L7) AT4g35240/F23E12_20... 111 4e-25
CN825572 75 4e-14
BP064849 64 1e-10
BP064527 59 2e-09
TC13425 weakly similar to UP|Q7XJL5 (Q7XJL5) At2g17100 protein, ... 48 5e-06
BP053768 36 0.027
TC17051 similar to UP|Q9ZRR7 (Q9ZRR7) SAP1 protein, partial (37%) 34 0.078
TC14334 weakly similar to UP|AMPL_YEAST (P14904) Vacuolar aminop... 33 0.13
TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Ar... 33 0.23
AV418055 32 0.38
TC14474 weakly similar to GB|AAA74598.1|598099|CSSPRP protamine ... 32 0.38
TC14393 similar to UP|Q93YA8 (Q93YA8) Calcium binding protein, p... 32 0.38
TC17157 similar to UP|CAD27462 (CAD27462) Nucleosome assembly pr... 32 0.50
TC17833 similar to UP|Q9LPJ4 (Q9LPJ4) F6N18.8, partial (23%) 31 0.86
TC15500 similar to UP|P93653 (P93653) Trehalose-6-phosphate synt... 31 0.86
TC8148 homologue to PIR|E86216|E86216 protein T23G18.10 [importe... 31 0.86
TC14757 similar to UP|O04361 (O04361) Prohibitin, complete 30 1.9
AW720038 30 1.9
BP041362 30 1.9
TC11354 similar to UP|CAE54480 (CAE54480) Alpha glucosidase II ... 30 1.9
>TC19422 weakly similar to UP|Q945L7 (Q945L7) AT4g35240/F23E12_200, partial
(39%)
Length = 624
Score = 111 bits (278), Expect = 4e-25
Identities = 61/154 (39%), Positives = 90/154 (57%), Gaps = 1/154 (0%)
Frame = +1
Query: 431 ASTLDRLHAWERKLYDEVKASEIVRKEYDAKCKILRNLESKAEKTSTVDKTRAAVKDLHS 490
+STL +L+ WE+KLY EVKA E +R ++D KC+ L+ L+ + + VD TR +++ L +
Sbjct: 163 SSTLQKLYLWEKKLYHEVKAEEKMRVDHDRKCRKLKRLDERGADFNKVDTTRTSIRSLST 342
Query: 491 RIRVAIHRIDSISKRIEELRDKELQPQLEELIEGLNRMWEVMHECHKLQFQ-IMSASYNN 549
+I++AI +D IS I +RD EL P L+ELI+GL RMW+ M ECH Q + I A
Sbjct: 343 KIKMAIQVVDKISMTISNIRDGELWPLLKELIQGLTRMWKSMLECHHSQCEAIREARILG 522
Query: 550 SHARITMHSELRRQITAYLENELQFLSSSFTKWI 583
S + T LE +L + F+ WI
Sbjct: 523 SIGSRKNSGDSHLLATKLLEQDLINWTFQFSGWI 624
>CN825572
Length = 619
Score = 75.1 bits (183), Expect = 4e-14
Identities = 54/175 (30%), Positives = 82/175 (46%), Gaps = 3/175 (1%)
Frame = +2
Query: 480 KTRAAVKDLHSRIRVAIHRIDSISKRIEELRDKELQPQLEELIEGLNRMWEVMHECHKLQ 539
KT+ ++ L S I V + + S I LRD +L PQL EL G+ MW MH+ H++Q
Sbjct: 5 KTKTSINRLQSLITVTSQAVSTTSTAIIGLRDSDLVPQLVELCHGIMYMWRSMHQYHEIQ 184
Query: 540 FQIMS--ASYNNSHARITMHSELRRQITAYLENELQFLSSSFTKWIEAQKSYLQAINGWI 597
I+ N +R SEL RQ T LE+ + SSF + I+ Q+ ++ +++GW
Sbjct: 185 SHIVQQVRGLVNRTSRGHSTSELHRQATRDLESAVSAWHSSFCRLIKFQRDFVLSLHGWF 364
Query: 598 H-KCVPLQQKSVKRKRRPQSELLIQYGPPIYATCDVWLKKLGTLPVKDVVDSIKS 651
VP+ + R S+ Y D W L +P ++IKS
Sbjct: 365 KLSLVPVDTDNNIHNSREASD--------AYMFFDEWKLALDRVPDTVASEAIKS 505
>BP064849
Length = 498
Score = 63.5 bits (153), Expect = 1e-10
Identities = 29/72 (40%), Positives = 48/72 (66%)
Frame = +2
Query: 1 MGASSSKMEEDKALQLCRERKKFVRQALDGRCSLAAAHISYVQSLRIVGTALSKFTEPEP 60
MG S SK+E+++++QLC++RKKF++QA++ R A H++Y++SL V AL + E +
Sbjct: 224 MGCSHSKLEDEESVQLCKDRKKFIKQAVEQRTRFATGHMAYIESLSRVSAALRDYIEGDE 403
Query: 61 HSESSLYTNATP 72
E SL + P
Sbjct: 404 PREFSLDSVMNP 439
>BP064527
Length = 522
Score = 59.3 bits (142), Expect = 2e-09
Identities = 36/68 (52%), Positives = 45/68 (65%), Gaps = 1/68 (1%)
Frame = -3
Query: 706 FLGQLNSLSGSSVKMYRELRQAIQEAKNNY-HRLNSQSQNGHLNYQSYHGHHHNFESQDE 764
FL QLN +GSSVKMY +LRQ IQ AK+ Y +R NSQ+Q+G N Q SQD+
Sbjct: 520 FLAQLNGFAGSSVKMYTDLRQDIQNAKSRYNYRSNSQTQDGLGNSQ----------SQDD 371
Query: 765 QSQSQSQV 772
S+SQS+V
Sbjct: 370 HSKSQSKV 347
>TC13425 weakly similar to UP|Q7XJL5 (Q7XJL5) At2g17100 protein, partial
(6%)
Length = 538
Score = 48.1 bits (113), Expect = 5e-06
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Frame = +1
Query: 1 MGASSSKMEEDKALQLCRERKKFVRQALDGRCSLAAAHISYVQSLRIVGTALSKFTEPEP 60
MG ++S+++ A LCR+R KF +AL +LA AH++++ SLR +G AL F +
Sbjct: 64 MGCNTSRLDHLPAAALCRDRCKFADEALRQSYALADAHVAHMDSLRTLGPALVCFFDHFQ 243
Query: 61 HSES-SLYTNATPEALALTDKAMSQSSPSMSQQIDA-GETHSFYTTPSPPSSSKFHANHM 118
+++ S+ ++ P L + A S P S + E+ + + P + NH
Sbjct: 244 ETKTVSILSSPPPPPLPVA--APPHSPPPCSDEFPLHSESDDDHDADNEPPRYDDYLNHR 417
Query: 119 KF-----------GSFSSKKVEEKPPVP 135
G F K PP P
Sbjct: 418 ILSPATPLSPPYSGGFWGSKSAPSPPPP 501
>BP053768
Length = 561
Score = 35.8 bits (81), Expect = 0.027
Identities = 22/92 (23%), Positives = 43/92 (45%), Gaps = 3/92 (3%)
Frame = +1
Query: 528 MWEVMHECHKLQFQIMS--ASYNNSHARITMHSELRRQITAYLENELQFLSSSFTKWIEA 585
MW MH+ H+ Q I+ N ++ SE +Q T LE+ + SSF I+
Sbjct: 178 MWRSMHQHHETQSSIVKQVRGLVNRSSKNHSTSETHKQATRDLESAVSSWHSSFNCLIKF 357
Query: 586 QKSYLQAINGWIH-KCVPLQQKSVKRKRRPQS 616
Q+ ++ +++ W +P+ ++ + Q+
Sbjct: 358 QRDFILSLHSWFKLNLIPINNNYMEHQPSDQA 453
Score = 32.7 bits (73), Expect = 0.23
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 432 STLDRLHAWERKLYDEVK 449
STLDRL AWE+KLY EVK
Sbjct: 114 STLDRLLAWEKKLYLEVK 167
>TC17051 similar to UP|Q9ZRR7 (Q9ZRR7) SAP1 protein, partial (37%)
Length = 611
Score = 34.3 bits (77), Expect = 0.078
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +3
Query: 37 AHISYVQSLRIVGTALSKFTEPEPHSESSLYTNATPE-ALALTDKAMSQSSPSMSQQIDA 95
+HI Y S V +A+S EP TPE ALA + S S S ++
Sbjct: 129 SHILYPHS---VASAVSSQLEPAKRKRGRPRKYGTPEQALAAKKASTSSFSASPREKKPQ 299
Query: 96 GETHSFYTTPSPPSSSKFHANHMKFGS 122
+HS TPS PS S +N + G+
Sbjct: 300 PHSHSQAFTPSSPSYSSKKSNSLSLGN 380
>TC14334 weakly similar to UP|AMPL_YEAST (P14904) Vacuolar aminopeptidase I
precursor (Polypeptidase) (Leucine aminopeptidase IV)
(LAPIV) (Aminopeptidase III) (Aminopeptidase yscI) ,
partial (4%)
Length = 1267
Score = 33.5 bits (75), Expect = 0.13
Identities = 22/72 (30%), Positives = 36/72 (49%)
Frame = -2
Query: 276 PNSSPSKKLPMAALLPPEANKSTEKENHSENKVTPKNFFSSMKDIEVLFNRASDSGKEVP 335
P ++PS++ P+ A PP +S ++ S ++ P++ S I L +R S +GKE P
Sbjct: 411 PFATPSRQTPLPARNPPAVARSGHRKQRSLHQRPPRSALVSTGRIPHLQSR-SAAGKESP 235
Query: 336 RMLEANKFHFRP 347
E RP
Sbjct: 234 APPETRTHRHRP 199
>TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;}, partial (44%)
Length = 700
Score = 32.7 bits (73), Expect = 0.23
Identities = 35/135 (25%), Positives = 54/135 (39%), Gaps = 13/135 (9%)
Frame = -2
Query: 41 YVQSLRIVGTALS-----KFTEPEPHSESSLYTNATPEALALTDKAMSQSSPSMS---QQ 92
++Q R+ G + S + + PEP + TP A + ++S SSPS S +
Sbjct: 465 WIQPYRLEGLSSSSPPSSESSSPEPSLSDLFLFDGTP---AFSPSSLSLSSPSSSSGSKS 295
Query: 93 IDAGETHSFYTTPS-----PPSSSKFHANHMKFGSFSSKKVEEKPPVPVIATVTSSGIAQ 147
+DA + + T P SSS ++ S SS PP P +SS +
Sbjct: 294 LDASSSSAAATVRRTRYSVPKSSSSSSSSSSSSSSSSSSSGSPPPPRPPSTPPSSSSSSS 115
Query: 148 NGSRMSETEAFEDSS 162
+ S A SS
Sbjct: 114 SSSSSPPPGASSSSS 70
>AV418055
Length = 407
Score = 32.0 bits (71), Expect = 0.38
Identities = 19/54 (35%), Positives = 26/54 (47%), Gaps = 2/54 (3%)
Frame = +2
Query: 56 TEP--EPHSESSLYTNATPEALALTDKAMSQSSPSMSQQIDAGETHSFYTTPSP 107
T+P +PHS + +YT TP + + + S SS S S GE TP P
Sbjct: 113 TQPLSDPHSTNPIYTTETP--IIVDSTSSSSSSSSSSSSSSTGEDFRRQETPKP 268
>TC14474 weakly similar to GB|AAA74598.1|598099|CSSPRP protamine P1
{Caenolestes fuliginosus;} , partial (49%)
Length = 1266
Score = 32.0 bits (71), Expect = 0.38
Identities = 14/38 (36%), Positives = 24/38 (62%)
Frame = +1
Query: 197 NAEEGGIPDLEDDEEKASSCGSEGSRDSEDEFDEEPTA 234
++++G + DLEDD++ + DS EFD+EP+A
Sbjct: 343 SSDDGDVDDLEDDDDTGN--------DSSSEFDDEPSA 432
>TC14393 similar to UP|Q93YA8 (Q93YA8) Calcium binding protein, partial
(85%)
Length = 786
Score = 32.0 bits (71), Expect = 0.38
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 38 HISYVQSLRIVGTALSKFTEPEPHSES-SLYTNATPEALALTDKAMSQSSPSMSQQIDAG 96
HIS SL + + TE E +E +L + P + + T K S+SSP+ + A
Sbjct: 19 HISLYLSLSLKTKQEWQQTETETETEKPTLKPVSNPLSTSTTWKNSSESSPASTPTATAR 198
Query: 97 ETHSFYTTPSPPSSSKFH 114
+ TT S PS FH
Sbjct: 199 SPSTSSTTSSAPSDPAFH 252
>TC17157 similar to UP|CAD27462 (CAD27462) Nucleosome assembly protein
1-like protein 3, partial (81%)
Length = 1298
Score = 31.6 bits (70), Expect = 0.50
Identities = 20/68 (29%), Positives = 32/68 (46%), Gaps = 7/68 (10%)
Frame = +2
Query: 175 LFNPVDHQF---SFQEPKGMPHHI----GNAEEGGIPDLEDDEEKASSCGSEGSRDSEDE 227
L N ++H + S K +PH + G AE+ D+E+D+E E D E+E
Sbjct: 656 LQNLMEHDYDIGSTIRDKIIPHAVSWFTGEAEQSDFEDIEEDDEDGDEDEDEDDDDDEEE 835
Query: 228 FDEEPTAE 235
D++ E
Sbjct: 836 EDDDDDDE 859
>TC17833 similar to UP|Q9LPJ4 (Q9LPJ4) F6N18.8, partial (23%)
Length = 665
Score = 30.8 bits (68), Expect = 0.86
Identities = 17/52 (32%), Positives = 25/52 (47%), Gaps = 1/52 (1%)
Frame = +1
Query: 61 HSESSLYTNATPEALALTDKAMSQSSPSMSQQIDAGETHSFY-TTPSPPSSS 111
+ ++S E L +T + SS S +++ G T Y TPSPP SS
Sbjct: 142 NGDASFVLGVKNEELMMTMDTSTTSSRSQQEELREGSTQDMYPATPSPPPSS 297
>TC15500 similar to UP|P93653 (P93653) Trehalose-6-phosphate synthase ,
partial (5%)
Length = 661
Score = 30.8 bits (68), Expect = 0.86
Identities = 25/101 (24%), Positives = 42/101 (40%), Gaps = 15/101 (14%)
Frame = +2
Query: 272 KGNFPNSSPSKKLPMAALLPPEANKSTEKENHSENKVTPKNFFS---------------S 316
KG P S+ KK + PP+ +TEK + + + +N+FS S
Sbjct: 62 KGQRPLSNSEKKASNHHICPPQRPATTEKISWNVLDLKKENYFSCAVGRTQTNARYTLGS 241
Query: 317 MKDIEVLFNRASDSGKEVPRMLEANKFHFRPIFQGKKDGSL 357
D+ F +D+ + M+E + I +GK+ G L
Sbjct: 242 SDDVIAFFKELADAS*NLSEMIEVHV*KKMKIERGKQ*GRL 364
>TC8148 homologue to PIR|E86216|E86216 protein T23G18.10 [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;}, partial
(75%)
Length = 1527
Score = 30.8 bits (68), Expect = 0.86
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Frame = +1
Query: 56 TEPEPHSESSLYTNATPEALALTDKAM-----SQSSPSMSQQIDAGETHSFYTTPSPPSS 110
T PE SS +P + L A +++SP+ ++ G + PS ++
Sbjct: 394 TSPEKSKRSSRSR*QSPTSRRLRCTARLSASRTRASPARIPRLRRGRL-TRTARPSRVTN 570
Query: 111 SKFHANHMKFGSFSSKKVEEKPPVPVIATVTSSGIAQNGSRMSETEAFEDSSVPDGTPQ 169
S+ + FGS ++ + K P +TVT++ + S SE F+ ++ +P+
Sbjct: 571 SR*RSRRWSFGSPTALSYQ*KTPSAAQSTVTTTSSSATASTSSEKSNFQSTTASSPSPE 747
>TC14757 similar to UP|O04361 (O04361) Prohibitin, complete
Length = 1141
Score = 29.6 bits (65), Expect = 1.9
Identities = 25/87 (28%), Positives = 34/87 (38%), Gaps = 29/87 (33%)
Frame = +1
Query: 52 LSKFTEPEPHSESSLYTNATPEALAL---------------------TDKAMSQSSPSMS 90
+SK+ +P S SS + A P A AL TD A S ++PS
Sbjct: 28 ISKWVATKPQSPSSQTSPAPPSASALPPPPSTPPSTPSMEASAPSSSTDSAASSTTPSAK 207
Query: 91 QQIDAGE--------THSFYTTPSPPS 109
+ I + T + TPSPPS
Sbjct: 208 EPISSSHGSRNPTSSTSALAPTPSPPS 288
>AW720038
Length = 561
Score = 29.6 bits (65), Expect = 1.9
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -2
Query: 85 SSPSMSQQIDAGETHSFYTTPSPPSSSKFHANHMKFGSFSS 125
SS S HS + TP PP++ F H+ G+FSS
Sbjct: 308 SSYSRYNHHPPARAHSKHLTPKPPNAPAFCHQHLHDGAFSS 186
>BP041362
Length = 560
Score = 29.6 bits (65), Expect = 1.9
Identities = 30/127 (23%), Positives = 46/127 (35%), Gaps = 11/127 (8%)
Frame = +3
Query: 197 NAEEGGIPDLEDDE-EKASSCGSEGSRDSEDEFDEEPTAETLVQRFENLNRANNHVQENV 255
N E IP L +DE + A+ GSE + E D+EP A+ R + H Q
Sbjct: 63 NTSESDIPRLREDEFDSATKSGSENHEGASGE-DQEPRAKK--------KRYHRHTQH-- 209
Query: 256 LPVKGDSVSEVELVSEKGNFPNSSPSKKLPMAALLPP----------EANKSTEKENHSE 305
+ E+E ++ P+ K+L L P T+ E H
Sbjct: 210 ------QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHEN 371
Query: 306 NKVTPKN 312
+ +N
Sbjct: 372 TSLRTEN 392
>TC11354 similar to UP|CAE54480 (CAE54480) Alpha glucosidase II , partial
(6%)
Length = 583
Score = 29.6 bits (65), Expect = 1.9
Identities = 32/124 (25%), Positives = 44/124 (34%), Gaps = 4/124 (3%)
Frame = -1
Query: 49 GTALSKFTEPEPHSESSLYTNATPEALALTDKAMSQSSPSMSQQIDAGETHSFYTTPSPP 108
G S T PHS S + P + MS S + S + TH TP+P
Sbjct: 418 GRKKSSETAIRPHSASE--PDPAPPPPPPSSPPMSPSPTATSPPTSSPNTHPPTPTPNP* 245
Query: 109 SSSKFHANHMKFGSFSSKKVEEKPPVPVIATVTSSGIA----QNGSRMSETEAFEDSSVP 164
SS S S+K + P P + TSS + +GS +S P
Sbjct: 244 SSPSPSTTTASSASPSTKTLPSTRPRPASESPTSSSPSSPPPSSGSSVSPPRISPPPPPP 65
Query: 165 DGTP 168
+P
Sbjct: 64 SNSP 53
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.312 0.128 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,144,676
Number of Sequences: 28460
Number of extensions: 182746
Number of successful extensions: 1195
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of query: 773
length of database: 4,897,600
effective HSP length: 97
effective length of query: 676
effective length of database: 2,136,980
effective search space: 1444598480
effective search space used: 1444598480
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Medicago: description of AC131455.1