TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC131240.2 + phase: 0 
         (90 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CN825728                                                               56  1e-09
TC15497 similar to UP|Q41695 (Q41695) Pectinacetylesterase precu...    54  5e-09
AV774673                                                               49  2e-07
BP076640                                                               27  0.48
BP053377                                                               25  3.1
BP061551                                                               25  3.1
TC15618                                                                24  4.0
AV767582                                                               24  4.0
AV422231                                                               24  5.3
TC14791 similar to UP|Q9LJ04 (Q9LJ04) ESTs AU082210(C53655), par...    24  5.3
TC17520 similar to GB|AAO63388.1|28950929|BT005324 At5g19850 {Ar...    24  5.3
TC15291                                                                24  5.3
TC13235 similar to UP|Q9LQB6 (Q9LQB6) F4N2.1, partial (38%)            23  6.9
TC16536 similar to UP|O22477 (O22477) Betaine aldehyde dehydroge...    23  6.9
AV417113                                                               23  9.0
AU089513                                                               23  9.0
TC8161 similar to UP|Q8LBV7 (Q8LBV7) Contains similarity to plas...    23  9.0
AV423678                                                               23  9.0

>CN825728 
          Length = 711

 Score = 55.8 bits (133), Expect = 1e-09
 Identities = 23/48 (47%), Positives = 32/48 (65%)
 Frame = +3

Query: 33  EPKKLYVNMTLVNNARETGAFCLDGSLPAYHLDRGFGAGEDNWLLQFE 80
           +P  L V +TL+  A   GA CLDG+LP YH   GFG+G ++WL++ E
Sbjct: 222 KPLPLMVPLTLIQGAASKGAVCLDGTLPGYHFHPGFGSGANSWLVELE 365


>TC15497 similar to UP|Q41695 (Q41695) Pectinacetylesterase precursor ,
           partial (55%)
          Length = 799

 Score = 53.9 bits (128), Expect = 5e-09
 Identities = 24/46 (52%), Positives = 30/46 (65%)
 Frame = +2

Query: 35  KKLYVNMTLVNNARETGAFCLDGSLPAYHLDRGFGAGEDNWLLQFE 80
           K+L     L  +A   GA CLDGS PAYH  +GFGAG +NW++ FE
Sbjct: 197 KELLFQSLLFKSAVAKGAVCLDGSPPAYHFHKGFGAGINNWIVHFE 334


>AV774673 
          Length = 208

 Score = 48.5 bits (114), Expect = 2e-07
 Identities = 24/54 (44%), Positives = 31/54 (56%)
 Frame = +3

Query: 35 KKLYVNMTLVNNARETGAFCLDGSLPAYHLDRGFGAGEDNWLLQFEVYSYFSHC 88
          K+L   +T V +A   GA  +DG  PAYH  +GFGAG +NWL+ F   S    C
Sbjct: 33 KELLYPIT*VQSAVANGAVSIDGRPPAYHNHKGFGAGINNWLVHFAGRSMVQQC 194


>BP076640 
          Length = 542

 Score = 27.3 bits (59), Expect = 0.48
 Identities = 9/37 (24%), Positives = 20/37 (53%)
 Frame = +3

Query: 4   NSFSVTMNFAVAFALFYLITVESWRVHSQEPKKLYVN 40
           N++S  +   +   +FY+   ++W +  + PKK  +N
Sbjct: 147 NNYSSIILHGIELIIFYIQITKTWEIKRRNPKKKRIN 257


>BP053377 
          Length = 484

 Score = 24.6 bits (52), Expect = 3.1
 Identities = 11/41 (26%), Positives = 22/41 (52%)
 Frame = +1

Query: 20  YLITVESWRVHSQEPKKLYVNMTLVNNARETGAFCLDGSLP 60
           +++ VE   +   +P+ L ++   +      GA CL+GS+P
Sbjct: 322 FILRVEDLDLGDLKPETLQLSSAFMLGVVLKGAGCLEGSIP 444


>BP061551 
          Length = 347

 Score = 24.6 bits (52), Expect = 3.1
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -1

Query: 25  ESWRVHSQEPKKLYVNMTLVNNARETGAF 53
           + W +HS +    Y++  L++   E G F
Sbjct: 314 DQWNIHSNDEPSEYLDSLLLHEIEELGPF 228


>TC15618 
          Length = 720

 Score = 24.3 bits (51), Expect = 4.0
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -2

Query: 34  PKKLYVNMTLVNNARETGAFCLDGSLPAYHLDRGFGAGE 72
           P   YV   ++   + T +  +  S+P +HL + F A +
Sbjct: 449 PMVEYVRTKILGTTQNTNSLPVPMSIPRHHLQQRFSANQ 333


>AV767582 
          Length = 284

 Score = 24.3 bits (51), Expect = 4.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 37  LYVNMTLVNNARETGAFCLD 56
           L+VN   +NN  ETG  C D
Sbjct: 179 LHVNYKNINNEEETGLLC*D 238


>AV422231 
          Length = 466

 Score = 23.9 bits (50), Expect = 5.3
 Identities = 9/17 (52%), Positives = 10/17 (57%)
 Frame = -3

Query: 57  GSLPAYHLDRGFGAGED 73
           G +   H D GFG GED
Sbjct: 155 GDICVVHFDGGFGIGED 105


>TC14791 similar to UP|Q9LJ04 (Q9LJ04) ESTs AU082210(C53655), partial (37%)
          Length = 1779

 Score = 23.9 bits (50), Expect = 5.3
 Identities = 13/28 (46%), Positives = 16/28 (56%)
 Frame = +2

Query: 16   FALFYLITVESWRVHSQEPKKLYVNMTL 43
            FALF   +VES +   +EP K Y   TL
Sbjct: 1025 FALFVYRSVESAKKALEEPNKEYEGHTL 1108


>TC17520 similar to GB|AAO63388.1|28950929|BT005324 At5g19850 {Arabidopsis
           thaliana;}, partial (43%)
          Length = 688

 Score = 23.9 bits (50), Expect = 5.3
 Identities = 10/22 (45%), Positives = 11/22 (49%)
 Frame = +1

Query: 54  CLDGSLPAYHLDRGFGAGEDNW 75
           C     PA  L  GFGA  D+W
Sbjct: 268 CSGNDGPALVLVHGFGANSDHW 333


>TC15291 
          Length = 557

 Score = 23.9 bits (50), Expect = 5.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 62  YHLDRGFGAGEDNWLLQFEVYSYFS 86
           Y   +  GAG+  WL Q E+Y Y S
Sbjct: 211 YSRAKPHGAGKCLWLNQHEMYRYHS 137


>TC13235 similar to UP|Q9LQB6 (Q9LQB6) F4N2.1, partial (38%)
          Length = 467

 Score = 23.5 bits (49), Expect = 6.9
 Identities = 12/32 (37%), Positives = 18/32 (55%), Gaps = 1/32 (3%)
 Frame = +3

Query: 5  SFSVTMNFAVAFAL-FYLITVESWRVHSQEPK 35
          S S + N    F+L F+L+  E WR   +EP+
Sbjct: 3  SSSYSCNLLQPFSLTFFLL*HEQWRTSGREPR 98


>TC16536 similar to UP|O22477 (O22477) Betaine aldehyde dehydrogenase  ,
           partial (71%)
          Length = 1097

 Score = 23.5 bits (49), Expect = 6.9
 Identities = 8/18 (44%), Positives = 13/18 (71%)
 Frame = -3

Query: 44  VNNARETGAFCLDGSLPA 61
           ++  R+TGAFCL+ +  A
Sbjct: 450 LSKGRDTGAFCLESNFSA 397


>AV417113 
          Length = 335

 Score = 23.1 bits (48), Expect = 9.0
 Identities = 8/12 (66%), Positives = 9/12 (74%)
 Frame = +3

Query: 79  FEVYSYFSHCSV 90
           F VYSYF HC +
Sbjct: 225 FCVYSYFKHCYI 260


>AU089513 
          Length = 334

 Score = 23.1 bits (48), Expect = 9.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 57  GSLPAYHLDRGFGAGEDNWL 76
           G L A     GFG GED W+
Sbjct: 182 GELEARVRYAGFGKGEDEWV 241


>TC8161 similar to UP|Q8LBV7 (Q8LBV7) Contains similarity to plastid
           ribosomal protein L19, partial (54%)
          Length = 1101

 Score = 23.1 bits (48), Expect = 9.0
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +1

Query: 7   SVTMNFAVAFALFYLITVESW-RVHSQEPKKLYVNMTL 43
           SV M   + F +  ++    W R+ SQ PK+  +NMT+
Sbjct: 892 SVCMLPLIIFEI*SVLPCIPWYRIESQAPKQTLLNMTV 1005


>AV423678 
          Length = 426

 Score = 23.1 bits (48), Expect = 9.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 71  GEDNWLLQFEVYSYFSHCSV 90
           G+DNW +  EV      CS+
Sbjct: 394 GDDNWFVSSEVQGEGRRCSI 335


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.326    0.137    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,901,591
Number of Sequences: 28460
Number of extensions: 21783
Number of successful extensions: 134
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of query: 90
length of database: 4,897,600
effective HSP length: 66
effective length of query: 24
effective length of database: 3,019,240
effective search space: 72461760
effective search space used: 72461760
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 48 (23.1 bits)