Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC130806.6 + phase: 0 /pseudo
         (2359 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BP065719                                                               55  2e-07
TC8445 similar to UP|O80910 (O80910) At2g38410 protein, partial ...    51  2e-06
TC18149 weakly similar to UP|Q91BL3 (Q91BL3) Essential structura...    51  2e-06
TC15341 similar to UP|Q9M0H8 (Q9M0H8) Predicted proline-rich pro...    49  9e-06
TC19740 similar to UP|FKH_DROME (P14734) Fork head protein, part...    46  8e-05
TC15540 similar to UP|Q9NGS5 (Q9NGS5) Prespore protein MF12 (Fra...    43  5e-04
TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%)    43  6e-04
TC16093 weakly similar to UP|PF21_ARATH (Q04088) Possible transc...    41  0.002
AU251673                                                               41  0.002
BP043633                                                               40  0.003
AW719943                                                               40  0.004
BG662087                                                               40  0.005
AV408212                                                               40  0.005
CB826726                                                               38  0.016
AU251563                                                               37  0.036
TC7888 similar to UP|Q40336 (Q40336) Proline-rich cell wall prot...    37  0.047
TC17551 weakly similar to UP|AAR24662 (AAR24662) At5g26960, part...    37  0.047
TC15704 similar to UP|O22265 (O22265) Expressed protein (At2g474...    37  0.047
TC15784 similar to UP|PE31_ARATH (Q9LHA7) Peroxidase 31 precurso...    36  0.061
TC16018 UP|Q8MZB8 (Q8MZB8) AT15479p (CG31542-PA), partial (7%)         36  0.079

>BP065719 
          Length = 567

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
 Frame = +3

Query: 183 QVPHKFKIPDFEKYKGSSCPE--EHLKMYVRRMPAYAQDDQILIYYFQESLTGPASKWYT 240
           ++P  +K+P F K+ G S     EH+  Y       A ++ + + YF  SLT  A  W+T
Sbjct: 159 ELPRGWKVPKFTKFSGDSGESTVEHIARYQIEAGDLAINENLKMKYFPSSLTKNAFTWFT 338

Query: 241 NLDKTRVQTFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWRDTAAQVS 300
            L    V T+  L   F EQ+ +  +      DL ++ +   E+  +Y  R+R   ++  
Sbjct: 339 TLAPRSVHTWAQLERIFHEQF-FRGECKVSXKDLASVKRKPAESIDDYLNRFRMLKSRCF 515

Query: 301 PRIEEKEMTKL 311
             + E E+  L
Sbjct: 516 THVSEHELVVL 548


>TC8445 similar to UP|O80910 (O80910) At2g38410 protein, partial (7%)
          Length = 841

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 39/110 (35%), Positives = 42/110 (37%), Gaps = 4/110 (3%)
 Frame = +1

Query: 378 MVTHGRPQ----QTYPAYQHIAAITPTSHPFQQTNNHPQIPQYPQIPQYPQIPQYPQFPQ 433
           M  H  PQ    Q  P  QH     P  HP  Q +  PQ+   PQ          PQ  Q
Sbjct: 7   MQLHNEPQPLQYQPQPHLQH----QPQHHPHFQPHPQPQLQSQPQ----------PQHIQ 144

Query: 434 NPSPQNTQQQNFQQQPYQQQPYQQFPYQQYPQQNFQQQPYQQRPQQPRPP 483
              PQ   Q    QQP Q QP  Q   Q  PQ  FQ Q +Q     P PP
Sbjct: 145 QSQPQPQSQPQHIQQP-QPQPQLQHIQQSQPQPQFQNQHFQYPGTYPPPP 291



 Score = 30.8 bits (68), Expect = 2.6
 Identities = 22/84 (26%), Positives = 28/84 (33%)
 Frame = +1

Query: 367 HFPRKKEQEVGMVTHGRPQQTYPAYQHIAAITPTSHPFQQTNNHPQIPQYPQIPQYPQIP 426
           H  + + Q      H +  Q  P  QHI    P     Q  N H Q P     P +   P
Sbjct: 136 HIQQSQPQPQSQPQHIQQPQPQPQLQHIQQSQPQP---QFQNQHFQYPGTYPPPPWAATP 306

Query: 427 QYPQFPQNPSPQNTQQQNFQQQPY 450
            YP +  + S  N         PY
Sbjct: 307 GYPNYQNHLSSTNALSTPQANTPY 378



 Score = 29.6 bits (65), Expect = 5.7
 Identities = 30/116 (25%), Positives = 40/116 (33%), Gaps = 5/116 (4%)
 Frame = +1

Query: 406 QTNNHPQIPQYPQIPQYPQIPQY-PQFPQNPSPQNTQQQNFQQQPYQQQPYQQFPYQQYP 464
           Q +N PQ  QY   P     PQ+ P F  +P PQ                      Q  P
Sbjct: 10  QLHNEPQPLQYQPQPHLQHQPQHHPHFQPHPQPQ---------------------LQSQP 126

Query: 465 QQNFQQQPYQQRPQQPRPPRMPINPIP----VTYAELLPGLLKKNLVQTRTAPPIP 516
           Q    QQ   Q   QP+  + P  P P    +  ++  P    ++     T PP P
Sbjct: 127 QPQHIQQSQPQPQSQPQHIQQP-QPQPQLQHIQQSQPQPQFQNQHFQYPGTYPPPP 291


>TC18149 weakly similar to UP|Q91BL3 (Q91BL3) Essential structural protein
           pp78/81, partial (5%)
          Length = 710

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 49/153 (32%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
 Frame = +3

Query: 385 QQTYPAYQHIAAITPTSHPFQQTNNHPQIPQYPQIP------------QYPQIPQY-PQF 431
           QQ +P+  ++    P   P    N  PQ+P    +P            Q P +PQ  P F
Sbjct: 66  QQQFPSPVNLPQSIPVVPP---PNAPPQLPPQQGLPPSFPPPNQFSQTQIPAVPQRDPYF 236

Query: 432 PQNPSPQNTQQQNFQQQPYQQQPYQQF---PYQQYPQQNFQQQPYQQRPQQPRPPRMPIN 488
           P     Q T  Q +QQ P   QP+ Q    P+QQY QQ    Q  Q  P Q +PP   IN
Sbjct: 237 PPPVQSQETPNQQYQQ-PLAPQPHPQPGAPPHQQY-QQTPHPQYSQPAPPQHQPPIPSIN 410

Query: 489 PIPVTYAELLPGLLKKNLVQTRTAPPIPEKLPS 521
           P P   + L   + +   V ++T PP   + PS
Sbjct: 411 P-PQLQSSLGHHVEEPPYVPSQTYPPNLRQPPS 506


>TC15341 similar to UP|Q9M0H8 (Q9M0H8) Predicted proline-rich protein,
           partial (33%)
          Length = 1002

 Score = 48.9 bits (115), Expect = 9e-06
 Identities = 36/108 (33%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
 Frame = +1

Query: 384 PQQTYPAYQHIAAITPTSH--PFQQTNNHPQIPQYPQIPQYPQIPQYPQFPQNPSPQNTQ 441
           P    P      A  P +   P  Q    PQ+    ++   P        P  P  Q  Q
Sbjct: 673 PSTPLPGNTQTVAQLPQNQYLPPDQQYRTPQMQDMSRVAPQPCTNXSGXSPPPPVQQYPQ 852

Query: 442 QQNFQQQPYQQQPYQQFPYQQYPQQNFQQQPYQQRPQQPRPPRMPINP 489
            Q  QQQ  QQQ  QQ+P QQ PQQ    QP   +  Q RPP  P+ P
Sbjct: 853 YQQPQQQQQQQQQQQQWP-QQLPQQVQPTQPPSMQSPQIRPPSSPVYP 993



 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 50/179 (27%), Positives = 64/179 (34%), Gaps = 32/179 (17%)
 Frame = +1

Query: 353 KDATPASGTKKTGNHFPRKKEQEVGMVTHGRPQQTYPAYQHIAAITPTSHPFQQTNNHPQ 412
           +D +P++   K  ++      Q++ +     P Q  P  Q  AA              PQ
Sbjct: 490 EDKSPSTTDSKKADNASDASNQQLALAL---PNQIAPQPQPAAA-------------QPQ 621

Query: 413 IPQYPQIPQYPQIPQYPQFPQNPSPQNTQQ-----QNFQQQPYQQQ-------------- 453
            P  P + Q PQ P Y   P  P P NTQ      QN    P QQ               
Sbjct: 622 APA-PNVTQAPQQPAY-YIPSTPLPGNTQTVAQLPQNQYLPPDQQYRTPQMQDMSRVAPQ 795

Query: 454 ------------PYQQFP-YQQYPQQNFQQQPYQQRPQQPRPPRMPINPIPVTYAELLP 499
                       P QQ+P YQQ  QQ  QQQ  QQ PQQ      P  P  +   ++ P
Sbjct: 796 PCTNXSGXSPPPPVQQYPQYQQPQQQQQQQQQQQQWPQQLPQQVQPTQPPSMQSPQIRP 972



 Score = 32.3 bits (72), Expect = 0.88
 Identities = 25/68 (36%), Positives = 27/68 (38%)
 Frame = +1

Query: 384 PQQTYPAYQHIAAITPTSHPFQQTNNHPQIPQYPQIPQYPQIPQYPQFPQNPSPQNTQQQ 443
           P Q YP YQ          P QQ     Q  Q+PQ  Q PQ  Q  Q P   SPQ     
Sbjct: 832 PVQQYPQYQQ---------PQQQQQQQQQQQQWPQ--QLPQQVQPTQPPSMQSPQIRPPS 978

Query: 444 NFQQQPYQ 451
           +    PYQ
Sbjct: 979 SPVYPPYQ 1002


>TC19740 similar to UP|FKH_DROME (P14734) Fork head protein, partial (4%)
          Length = 622

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 26/58 (44%), Positives = 28/58 (47%)
 Frame = +3

Query: 432 PQNPSPQNTQQQNFQQQPYQQQPYQQFPYQQYPQQNFQQQPYQQRPQQPRPPRMPINP 489
           P NP  Q  Q Q  Q Q  QQQ  Q F +QQ P   F + P    PQQP PP M   P
Sbjct: 105 PHNPQHQQHQHQQHQHQFQQQQQPQHFHHQQ-PGPEFHRGPPPPPPQQPHPPPMMRQP 275


>TC15540 similar to UP|Q9NGS5 (Q9NGS5) Prespore protein MF12 (Fragment),
           partial (6%)
          Length = 806

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 33/76 (43%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
 Frame = +2

Query: 411 PQIPQYPQIPQY-PQIPQYPQFPQNPSPQNTQQQNFQQQP------YQQQPYQQFPYQQY 463
           PQ+ Q  Q+ Q  PQ+ Q  Q  Q   PQ  QQQ  Q Q        QQQ  Q  P QQ 
Sbjct: 11  PQLQQQQQLQQQPPQLTQLQQQQQQQLPQVQQQQLSQMQQQQLPQLQQQQLSQLQPQQQL 190

Query: 464 PQQNFQQQPYQQRPQQ 479
           PQ   QQ  +QQ PQQ
Sbjct: 191 PQ--LQQLQHQQLPQQ 232



 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 31/65 (47%), Positives = 32/65 (48%), Gaps = 7/65 (10%)
 Frame = +2

Query: 421 QYPQIPQYPQFPQNPSPQNTQQQNFQQQ---PYQQQPYQQFPYQQYPQQNFQQ----QPY 473
           Q PQ+ Q  Q  Q P PQ TQ Q  QQQ     QQQ   Q   QQ PQ   QQ    QP 
Sbjct: 5   QLPQLQQQQQLQQQP-PQLTQLQQQQQQQLPQVQQQQLSQMQQQQLPQLQQQQLSQLQPQ 181

Query: 474 QQRPQ 478
           QQ PQ
Sbjct: 182 QQLPQ 196



 Score = 38.5 bits (88), Expect = 0.012
 Identities = 32/75 (42%), Positives = 34/75 (44%), Gaps = 3/75 (4%)
 Frame = +2

Query: 405 QQTNNHPQIPQYPQIPQYPQIPQYPQFPQNPSPQNTQQQN---FQQQPYQQQPYQQFPYQ 461
           QQ     Q PQ  Q+ Q  Q  Q PQ  Q    Q  QQQ     QQQ  Q QP QQ P  
Sbjct: 23  QQQQLQQQPPQLTQLQQQQQ-QQLPQVQQQQLSQMQQQQLPQLQQQQLSQLQPQQQLP-- 193

Query: 462 QYPQQNFQQQPYQQR 476
           Q  Q   QQ P QQ+
Sbjct: 194 QLQQLQHQQLPQQQQ 238



 Score = 37.4 bits (85), Expect = 0.027
 Identities = 21/45 (46%), Positives = 23/45 (50%)
 Frame = +2

Query: 437 PQNTQQQNFQQQPYQQQPYQQFPYQQYPQQNFQQQPYQQRPQQPR 481
           PQ  QQQ  QQQP Q    QQ   QQ PQ   QQ    Q+ Q P+
Sbjct: 11  PQLQQQQQLQQQPPQLTQLQQQQQQQLPQVQQQQLSQMQQQQLPQ 145


>TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%)
          Length = 562

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 34/107 (31%), Positives = 42/107 (38%), Gaps = 4/107 (3%)
 Frame = +1

Query: 384 PQQTYPAYQHIAAITPTSHPFQQTNNHPQIPQYPQIPQYP----QIPQYPQFPQNPSPQN 439
           P+   P+Y      +P   P    NNHP  P  P  P+ P    Q P  P  P+ PSP +
Sbjct: 88  PKTPSPSYSPPNVPSPPKAP--SPNNHP--PYTPTPPKTPSPTSQPPYIPLPPKTPSPIS 255

Query: 440 TQQQNFQQQPYQQQPYQQFPYQQYPQQNFQQQPYQQRPQQPRPPRMP 486
            Q  +    P    P  Q PY   P +     P  Q P  P PP  P
Sbjct: 256 -QPPHVPTPPSTPSPISQPPYTPTPPKT--PSPTSQPPHTPTPPNTP 387



 Score = 35.8 bits (81), Expect = 0.079
 Identities = 30/96 (31%), Positives = 37/96 (38%), Gaps = 1/96 (1%)
 Frame = +1

Query: 389 PAYQHIAAITPTSHPFQQTNNHPQIPQYPQIPQ-YPQIPQYPQFPQNPSPQNTQQQNFQQ 447
           P Y  +   TP+  P  Q    P +P  P  P    Q P  P  P+ PSP  +Q  +   
Sbjct: 211 PPYIPLPPKTPS--PISQP---PHVPTPPSTPSPISQPPYTPTPPKTPSP-TSQPPHTPT 372

Query: 448 QPYQQQPYQQFPYQQYPQQNFQQQPYQQRPQQPRPP 483
            P    P  Q PY   P +     P  Q P  P PP
Sbjct: 373 PPNTPSPISQPPYTPTPPKT--PSPTNQPPHIPSPP 474


>TC16093 weakly similar to UP|PF21_ARATH (Q04088) Possible transcription
           factor PosF21 (AtbZIP59), partial (17%)
          Length = 570

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 23/52 (44%), Positives = 26/52 (49%)
 Frame = +1

Query: 427 QYPQFPQNPSPQNTQQQNFQQQPYQQQPYQQFPYQQYPQQNFQQQPYQQRPQ 478
           Q+ Q   +P      Q  FQQ   QQQ  QQ P QQ PQQ  QQQ  +Q  Q
Sbjct: 88  QFQQLQIHPQKHQQHQHQFQQPIQQQQQQQQQPIQQ-PQQQMQQQQQEQHQQ 240



 Score = 33.9 bits (76), Expect = 0.30
 Identities = 31/98 (31%), Positives = 38/98 (38%)
 Frame = +1

Query: 382 GRPQQTYPAYQHIAAITPTSHPFQQTNNHPQIPQYPQIPQYPQIPQYPQFPQNPSPQNTQ 441
           G  QQ YP + H       +  FQQ   HPQ                         ++ Q
Sbjct: 28  GGGQQFYP-HNHSMHTLLAAQQFQQLQIHPQ-------------------------KHQQ 129

Query: 442 QQNFQQQPYQQQPYQQFPYQQYPQQNFQQQPYQQRPQQ 479
            Q+  QQP QQQ  QQ    Q P Q  QQQ  QQ+ +Q
Sbjct: 130 HQHQFQQPIQQQQQQQ----QQPIQQPQQQMQQQQQEQ 231



 Score = 28.9 bits (63), Expect = 9.7
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +1

Query: 431 FPQNPSPQNT-QQQNFQQQPYQQQPYQQFPYQQYPQQNFQQQPYQQRP-QQPR 481
           +P N S       Q FQQ     Q +QQ  +Q + Q   QQQ  QQ+P QQP+
Sbjct: 46  YPHNHSMHTLLAAQQFQQLQIHPQKHQQHQHQ-FQQPIQQQQQQQQQPIQQPQ 201


>AU251673 
          Length = 413

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 26/119 (21%), Positives = 53/119 (43%), Gaps = 5/119 (4%)
 Frame = +2

Query: 231 LTGPASKWYTNLDKTRVQ-----TFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETF 285
           L G A  WY  L + +       T+ D    F+ ++           D + + Q +  T 
Sbjct: 44  LEGVARDWYNVLTRAKPVGSPPWTWADFSAEFMNRFLPQSVRDGFVRDFERLEQAEGMTV 223

Query: 286 KEYAQRWRDTAAQVSPRIEEKEMTKLFLKTLNHFYYKKMVGSTPKSFAEMVGMGVQLEE 344
            EY+  +   +  V   + E+E  K F++ L  + +K +VGS   + +E++ + + +E+
Sbjct: 224 SEYSAHFTHLSRYVPYPLLEEERVKRFVRGLKEYLFKSVVGSKSSTLSEVLSLALLVEQ 400


>BP043633 
          Length = 542

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 29/89 (32%), Positives = 34/89 (37%), Gaps = 1/89 (1%)
 Frame = +1

Query: 399 PTSHPFQQTNNHPQIPQYPQIPQYPQIPQY-PQFPQNPSPQNTQQQNFQQQPYQQQPYQQ 457
           P   P    N+H   PQ P  P  PQ P Y PQF  +   Q          P    P   
Sbjct: 256 PPPPPPPDPNHHHHFPQIPP-PHPPQAPWYSPQFQYHHPSQTPSPPPQWGPPPPPPPPPS 432

Query: 458 FPYQQYPQQNFQQQPYQQRPQQPRPPRMP 486
            PY  +P+Q F   P   RP  P  P+ P
Sbjct: 433 NPYSYHPKQ-FPPPPPPPRPPHPPHPQFP 516



 Score = 36.6 bits (83), Expect = 0.047
 Identities = 31/98 (31%), Positives = 39/98 (39%), Gaps = 10/98 (10%)
 Frame = +1

Query: 404 FQQTNNHPQIPQYPQIPQYPQIPQYPQ-FPQNPSPQNTQQQNFQQQPYQQQPYQQ-FPYQ 461
           +QQ + + + PQ P  P  P  P +   FPQ P P   Q   +  Q     P Q   P  
Sbjct: 214 YQQPHGYMRPPQPPPPPPPPPDPNHHHHFPQIPPPHPPQAPWYSPQFQYHHPSQTPSPPP 393

Query: 462 QY----PQQNFQQQPYQQRPQQ----PRPPRMPINPIP 491
           Q+    P       PY   P+Q    P PPR P  P P
Sbjct: 394 QWGPPPPPPPPPSNPYSYHPKQFPPPPPPPRPPHPPHP 507


>AW719943 
          Length = 508

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 22/44 (50%), Positives = 27/44 (61%)
 Frame = +2

Query: 436 SPQNTQQQNFQQQPYQQQPYQQFPYQQYPQQNFQQQPYQQRPQQ 479
           +PQ  QQ   QQQ +Q  P QQ P+QQ    N QQQ +QQ+ QQ
Sbjct: 80  TPQQQQQPQQQQQLFQ--PQQQSPFQQNSLFNSQQQQFQQQQQQ 205



 Score = 38.1 bits (87), Expect = 0.016
 Identities = 22/47 (46%), Positives = 24/47 (50%)
 Frame = +2

Query: 432 PQNPSPQNTQQQNFQQQPYQQQPYQQFPYQQYPQQNFQQQPYQQRPQ 478
           PQ       QQQ F  QP QQ P+QQ       QQ FQQQ  QQ+ Q
Sbjct: 83  PQQQQQPQQQQQLF--QPQQQSPFQQNSLFNSQQQQFQQQQQQQQQQ 217



 Score = 34.3 bits (77), Expect = 0.23
 Identities = 22/47 (46%), Positives = 23/47 (48%)
 Frame = +2

Query: 411 PQIPQYPQIPQYPQIPQYPQFPQNPSPQNTQQQNFQQQPYQQQPYQQ 457
           PQ  Q PQ  Q    PQ     Q  S  N+QQQ FQQQ  QQQ   Q
Sbjct: 83  PQQQQQPQQQQQLFQPQQQSPFQQNSLFNSQQQQFQQQQQQQQQQHQ 223



 Score = 33.9 bits (76), Expect = 0.30
 Identities = 19/47 (40%), Positives = 21/47 (44%)
 Frame = +2

Query: 429 PQFPQNPSPQNTQQQNFQQQPYQQQPYQQFPYQQYPQQNFQQQPYQQ 475
           PQ  Q P  Q    Q  QQ P+QQ        QQ+ QQ  QQQ   Q
Sbjct: 83  PQQQQQPQQQQQLFQPQQQSPFQQNSLFNSQQQQFQQQQQQQQQQHQ 223



 Score = 30.8 bits (68), Expect = 2.6
 Identities = 21/50 (42%), Positives = 26/50 (52%)
 Frame = +2

Query: 414 PQYPQIPQYPQIPQYPQFPQNPSPQNTQQQNFQQQPYQQQPYQQFPYQQY 463
           PQ  Q PQ  Q    PQ  Q+P  QN+   + QQQ  QQQ  QQ  +Q +
Sbjct: 83  PQQQQQPQQQQQLFQPQ-QQSPFQQNSLFNSQQQQFQQQQQQQQQQHQLF 229


>BG662087 
          Length = 373

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 26/75 (34%), Positives = 38/75 (50%)
 Frame = +3

Query: 1388 KQS*PERRLSFTSY*RVG*QYCKV*SLLIHGWILRI*SNQDGTRR*RENIIYYTLGHFLL 1447
            +Q  P+R LS   Y + G    + *     G +LR+  NQD   R* +N ++   G  LL
Sbjct: 51   EQGMPKRLLSIAKYRQTGGWSVRQ*VAKPDGCLLRLSPNQDAPIR*GQNGLHDRQGKLLL 230

Query: 1448 QSNAVRFNQCRSYLS 1462
              N+VR  +CR  +S
Sbjct: 231  PDNSVRVEECRGDIS 275


>AV408212 
          Length = 362

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 21/50 (42%), Positives = 26/50 (52%)
 Frame = +3

Query: 433 QNPSPQNTQQQNFQQQPYQQQPYQQFPYQQYPQQNFQQQPYQQRPQQPRP 482
           Q+P  Q  QQQ+ Q Q    Q +     QQ  QQ  QQQ  QQ+ QQ +P
Sbjct: 12  QSPHQQQQQQQHMQMQQILLQRHAALQQQQQQQQQQQQQQQQQQSQQQQP 161



 Score = 32.3 bits (72), Expect = 0.88
 Identities = 19/52 (36%), Positives = 25/52 (47%)
 Frame = +3

Query: 402 HPFQQTNNHPQIPQYPQIPQYPQIPQYPQFPQNPSPQNTQQQNFQQQPYQQQ 453
           H  QQ   H Q+ Q   + ++  + Q  Q  Q    Q  QQQ+ QQQP  QQ
Sbjct: 21  HQQQQQQQHMQMQQI-LLQRHAALQQQQQQQQQQQQQQQQQQSQQQQPQSQQ 173



 Score = 30.4 bits (67), Expect = 3.3
 Identities = 22/61 (36%), Positives = 28/61 (45%)
 Frame = +3

Query: 421 QYPQIPQYPQFPQNPSPQNTQQQNFQQQPYQQQPYQQFPYQQYPQQNFQQQPYQQRPQQP 480
           Q  Q  Q+ Q  Q    ++   Q  QQQ  QQQ       QQ  QQ+ QQQP  Q+  + 
Sbjct: 24  QQQQQQQHMQMQQILLQRHAALQQQQQQQQQQQ------QQQQQQQSQQQQPQSQQQSRD 185

Query: 481 R 481
           R
Sbjct: 186 R 188


>CB826726 
          Length = 505

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
 Frame = +2

Query: 384 PQQTYPAYQHIAAITPTSHPFQQTNNHPQIPQYPQIPQYPQIPQYPQFPQN----PSPQN 439
           P+ T      +  ++       Q NN+       +  +YP  P  P         P+P  
Sbjct: 167 PRTTTVLVHSLCEVSLLGFSIAQMNNNNNNNNVNRANRYPLHPPPPGIGYGRGGGPNPNP 346

Query: 440 TQQQNFQQQ-PYQQQPYQQFPYQQYPQQNFQQQPYQQR 476
              Q FQ + PYQQQ  QQ   Q Y Q+N  QQ  QQ+
Sbjct: 347 NPNQGFQPRLPYQQQQQQQ--QQHYVQRNLAQQQQQQQ 454


>AU251563 
          Length = 350

 Score = 37.0 bits (84), Expect = 0.036
 Identities = 27/88 (30%), Positives = 36/88 (40%)
 Frame = +3

Query: 39  RSQAPPPPPPVRTQAEASSSWTLCADTPTRSAPQRSTPWFPPFTAGEIFRPITCEAQMPT 98
           R   PPPPPP ++ + +SS  T C  +P   +P   TP   P       R     A  PT
Sbjct: 54  RRTPPPPPPPHQSTSASSSLRTTCLPSPLPPSP--PTPATAPSPPTTTLRASLPAAPTPT 227

Query: 99  HQYTAQVPLPAMRVTPATMTYSAPVIHT 126
              T + P    R    T T + P  H+
Sbjct: 228 PTKTPKTPSSTTR--RMTTTTNPPCAHS 305


>TC7888 similar to UP|Q40336 (Q40336) Proline-rich cell wall protein,
           partial (60%)
          Length = 913

 Score = 36.6 bits (83), Expect = 0.047
 Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 4/137 (2%)
 Frame = +3

Query: 367 HFPRKKEQEVGMVTHGRPQQTYPAYQHIAAITPTSHPFQQTNNHPQIP--QYPQIPQYPQ 424
           H P +    V    H  P+  YP   H     P   P  +  ++P+ P  + P +P+ P 
Sbjct: 231 HKPPQHPPIVKPPVHKPPK--YPP-SHGPEPCPPPKPSPKPPHYPKPPVVKPPHVPKPPV 401

Query: 425 I--PQYPQFPQNPSPQNTQQQNFQQQPYQQQPYQQFPYQQYPQQNFQQQPYQQRPQQPRP 482
           +  P  P+ P    P   +  +  + P  + PY   P    P     + P    P  P+P
Sbjct: 402 VKPPHVPKPPIVKPPYVPKPPHVPKPPIVKPPYVPKPPVVKPPPYVPKPPVVSPPYVPKP 581

Query: 483 PRMPINPIPVTYAELLP 499
           P +P+ P  V    ++P
Sbjct: 582 PVVPVTPPYVPKPPVVP 632



 Score = 30.4 bits (67), Expect = 3.3
 Identities = 20/74 (27%), Positives = 29/74 (39%)
 Frame = +3

Query: 417 PQIPQYPQIPQYPQFPQNPSPQNTQQQNFQQQPYQQQPYQQFPYQQYPQQNFQQQPYQQR 476
           P +P+ P +P  P  P  P P   +       PY  +P    P   YP       P  + 
Sbjct: 603 PYVPKPPVVPVTP--PYVPKPPIVKPPIVYPPPYVPKPPIVKPPIVYPPPYVPTPPIVKP 776

Query: 477 PQQPRPPRMPINPI 490
           P    PP +P+ P+
Sbjct: 777 PIVYPPPYVPLPPV 818


>TC17551 weakly similar to UP|AAR24662 (AAR24662) At5g26960, partial (22%)
          Length = 505

 Score = 36.6 bits (83), Expect = 0.047
 Identities = 40/158 (25%), Positives = 63/158 (39%)
 Frame = +1

Query: 381 HGRPQQTYPAYQHIAAITPTSHPFQQTNNHPQIPQYPQIPQYPQIPQYPQFPQNPSPQNT 440
           H   +QT     H   + P  H  +    HP+   +P  P  P++P  P  P  P P+  
Sbjct: 85  HHHRRQTTATTSHHHFLPP*RHHSRLP--HPRPTLFPPFP-LPRLP--PLVPPPPLPRLL 249

Query: 441 QQQNFQQQPYQQQPYQQFPYQQYPQQNFQQQPYQQRPQQPRPPRMPINPIPVTYAELLPG 500
           +       P    P +  P++           ++ RP    PPR  + P+P      LP 
Sbjct: 250 RPP---PPPPPPPPLRPRPHR-----------HRLRPLLRHPPRRQMEPLP------LPP 369

Query: 501 LLKKNLVQTRTAPPIPEKLPSWYRLDQTCDFHEGGRGH 538
           LL++ L +    PP+P + P ++R      FH   R H
Sbjct: 370 LLQRRLPRDLPLPPLP-RAPRFHRPQ---GFHRRKRRH 471


>TC15704 similar to UP|O22265 (O22265) Expressed protein
           (At2g47450/T30B22.25), partial (25%)
          Length = 664

 Score = 36.6 bits (83), Expect = 0.047
 Identities = 24/89 (26%), Positives = 33/89 (36%)
 Frame = -1

Query: 403 PFQQTNNHPQIPQYPQIPQYPQIPQYPQFPQNPSPQNTQQQNFQQQPYQQQPYQQFPYQQ 462
           P   T+ HPQ+   P  P     P+ P  P+NPSP    Q +     +  +P        
Sbjct: 310 PTAPTSPHPQLSGQPPPPP----PRTPAPPRNPSPDPPPQTSHSPTRFHHRP-------S 164

Query: 463 YPQQNFQQQPYQQRPQQPRPPRMPINPIP 491
             +      P    P  P PPR    P+P
Sbjct: 163 TARDTPNSHPSPSAPISPPPPRTRTPPLP 77


>TC15784 similar to UP|PE31_ARATH (Q9LHA7) Peroxidase 31 precursor  (Atperox
           P31) (ATP41) , partial (38%)
          Length = 475

 Score = 36.2 bits (82), Expect = 0.061
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 13/91 (14%)
 Frame = +1

Query: 32  AVTEAQARSQAPPPPPPVRTQAEASSSWTLCADTPTRSAPQ-------------RSTPWF 78
           + T +      PPPP P R+ + ++++ T  A TP  S+PQ               +P  
Sbjct: 157 SATPSPTNKSPPPPPAPPRSASSSTTASTPTAATPPSSSPQLPSTKPNATPTSTSPSPAT 336

Query: 79  PPFTAGEIFRPITCEAQMPTHQYTAQVPLPA 109
           P  ++ E+  P    A  P+   T+  P PA
Sbjct: 337 PSTSSSELKPPSNSLAPTPSPAPTSSPPPPA 429



 Score = 35.4 bits (80), Expect = 0.10
 Identities = 33/112 (29%), Positives = 44/112 (38%), Gaps = 2/112 (1%)
 Frame = +2

Query: 380 THGRPQQTYPAYQHIAAITPTS--HPFQQTNNHPQIPQYPQIPQYPQIPQYPQFPQNPSP 437
           TH R  QT     H+  I P    H  QQTN+HP    + +    P +P     P+ P P
Sbjct: 107 THTRLLQT-----HVPTILPNHPRHRHQQTNHHP----HHRPRHAPPLP-----PRLPPP 244

Query: 438 QNTQQQNFQQQPYQQQPYQQFPYQQYPQQNFQQQPYQQRPQQPRPPRMPINP 489
           Q  ++ +                   P  NF QQ   +R  QP PPR  + P
Sbjct: 245 QRLRRLH------------------PPLLNFLQQSRTRRRHQPLPPRRRLRP 346



 Score = 34.3 bits (77), Expect = 0.23
 Identities = 32/109 (29%), Positives = 43/109 (39%), Gaps = 9/109 (8%)
 Frame = +1

Query: 23  QAQAQTQAQAVTEAQARSQAPPPPPPVRTQAEASSSWTLCADTPTRSAPQRSTPWF---- 78
           +A    ++ A      +S  PPP PP      ASSS T  A TPT + P  S+P      
Sbjct: 133 RAHNSPKSSATPSPTNKSPPPPPAPP----RSASSSTT--ASTPTAATPPSSSPQLPSTK 294

Query: 79  ----PPFTAGEIFRPITCEAQM-PTHQYTAQVPLPAMRVTPATMTYSAP 122
               P  T+     P T  +++ P     A  P PA   +P     S P
Sbjct: 295 PNATPTSTSPSPATPSTSSSELKPPSNSLAPTPSPAPTSSPPPPATS*P 441


>TC16018 UP|Q8MZB8 (Q8MZB8) AT15479p (CG31542-PA), partial (7%)
          Length = 425

 Score = 35.8 bits (81), Expect = 0.079
 Identities = 24/93 (25%), Positives = 40/93 (42%), Gaps = 6/93 (6%)
 Frame = +2

Query: 394 IAAITPTSHPFQQ--TNNHPQIPQYPQIPQYPQIPQYPQFPQNPSPQNTQQQNFQQQ--- 448
           +A+ +    PF Q   N+H     +    +     Q+P +P  P    +   +F      
Sbjct: 17  LASSSTMEFPFNQGRNNSHATHTHHHNNRRDDDEEQHPNYPPPPGSTGSPYSSFNNPYPP 196

Query: 449 PYQQQPYQQFPYQQYPQQ-NFQQQPYQQRPQQP 480
           P QQ P+   P++  PQQ  F  +P++  P QP
Sbjct: 197 PQQQPPFYGEPHRPPPQQPPFYGEPHRPPPSQP 295


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.343    0.149    0.504 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,672,360
Number of Sequences: 28460
Number of extensions: 639338
Number of successful extensions: 10539
Number of sequences better than 10.0: 173
Number of HSP's better than 10.0 without gapping: 8068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9673
length of query: 2359
length of database: 4,897,600
effective HSP length: 105
effective length of query: 2254
effective length of database: 1,909,300
effective search space: 4303562200
effective search space used: 4303562200
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.5 bits)
S2: 63 (28.9 bits)


Medicago: description of AC130806.6