BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC127019.17 + phase: 0 /pseudo
(170 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC8324 UP|Q8VWY1 (Q8VWY1) Mitochondrial phosphate transporter, c... 115 5e-27
TC19374 similar to UP|Q8LNZ1 (Q8LNZ1) Mitochondrial uncoupling p... 46 3e-06
TC16446 similar to UP|BAC84529 (BAC84529) Mitochondrial aspartat... 44 2e-05
TC12607 weakly similar to UP|MRS3_YEAST (P10566) Mitochondrial R... 43 2e-05
TC18745 weakly similar to UP|ADT2_HUMAN (P05141) ADP,ATP carrier... 43 3e-05
AV771915 42 6e-05
TC11347 similar to GB|AAO63393.1|28950939|BT005329 At2g26360 {Ar... 40 2e-04
TC7883 homologue to UP|ADT1_GOSHI (O22342) ADP,ATP carrier prote... 39 5e-04
TC19237 similar to GB|AAP42736.1|30984546|BT008723 At1g07030 {Ar... 38 0.001
TC7935 similar to UP|O49447 (O49447) ADP, ATP carrier-like prote... 38 0.001
TC8441 homologue to UP|ADT2_SOLTU (P27081) ADP,ATP carrier prote... 37 0.002
TC7882 homologue to UP|O49875 (O49875) Adenine nucleotide transl... 37 0.002
TC10512 similar to UP|Q9FI73 (Q9FI73) Mitochondrial carrier prot... 36 0.004
TC11705 homologue to UP|O49875 (O49875) Adenine nucleotide trans... 34 0.012
TC7843 weakly similar to GB|AAF03412.1|6090963|AF188712 mitochon... 30 0.17
AV408895 30 0.17
BP035958 30 0.22
BP039065 29 0.37
BP056260 29 0.37
BP047276 28 0.64
>TC8324 UP|Q8VWY1 (Q8VWY1) Mitochondrial phosphate transporter, complete
Length = 1605
Score = 115 bits (287), Expect = 5e-27
Identities = 51/105 (48%), Positives = 71/105 (67%), Gaps = 4/105 (3%)
Frame = +3
Query: 13 TPRYYALCTIGGMLSAGTTHLATTPLDVLKVNMQVHPIKYYSISSCFTTLLREQGPSVLW 72
+P +YA CT+GG+LS G TH+ TPLD++K NMQ+ P KY SISS F LL+EQG +
Sbjct: 315 SPAFYAACTVGGILSCGLTHMTVTPLDLVKCNMQIDPTKYKSISSGFGVLLKEQGVKGFF 494
Query: 73 KGWTGKFFGYGAQGGCRFGLYEYFKGVYSNV----LVDQHRSLVY 113
+GW GY AQG C+FG YE+FK YS++ ++++L+Y
Sbjct: 495 RGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYATKYKTLIY 629
>TC19374 similar to UP|Q8LNZ1 (Q8LNZ1) Mitochondrial uncoupling protein,
partial (49%)
Length = 556
Score = 46.2 bits (108), Expect = 3e-06
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Frame = +3
Query: 27 SAGTTHLATTPLDVLKVNMQVHPI----------KYYSISSCFTTLLREQGPSVLWKGWT 76
SA + T PLD KV +Q+ KY + T+ RE+G S LWKG
Sbjct: 147 SACFAEVCTIPLDTAKVRLQLQKQGIAGDVASLPKYKGMLGTIATIAREEGASALWKGIV 326
Query: 77 GKFFGYGAQGGCRFGLYEYFKGVY 100
GG R GLYE K +Y
Sbjct: 327 PGLHRQCLYGGLRIGLYEPVKALY 398
>TC16446 similar to UP|BAC84529 (BAC84529) Mitochondrial aspartate-glutamate
carrier protein-like, partial (43%)
Length = 668
Score = 43.5 bits (101), Expect = 2e-05
Identities = 25/76 (32%), Positives = 35/76 (45%), Gaps = 2/76 (2%)
Frame = +3
Query: 24 GMLSAGTTHLATTPLDVLKVNMQVHPI--KYYSISSCFTTLLREQGPSVLWKGWTGKFFG 81
G + T TTPLDV+K + V +Y I C T+++E+GP KG +
Sbjct: 126 GAFAGALTGAITTPLDVIKTRLMVQGSANQYKGIVDCVQTIMKEEGPRAFLKGIGPRVLW 305
Query: 82 YGAQGGCRFGLYEYFK 97
G G FG+ E K
Sbjct: 306 IGIGGSIFFGVLESSK 353
>TC12607 weakly similar to UP|MRS3_YEAST (P10566) Mitochondrial RNA splicing
protein MRS3, partial (7%)
Length = 776
Score = 43.1 bits (100), Expect = 2e-05
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +2
Query: 14 PRYYALCTIGGMLSAGTTHLATTPLDVLKVNMQV--HPIKYYSISSCFTTLLREQGPSVL 71
P+ + GG+++ T TTPLD +K +QV H + S+ L++E G +
Sbjct: 17 PKIIFVQAAGGIIAGATASCITTPLDTIKTRLQVMGHE-QRSSVKQVVKDLIKEDGWKGV 193
Query: 72 WKGWTGKFFGYGAQGGCRFGLYEYFK 97
++G +FF A G YEY K
Sbjct: 194 YRGLGPRFFSMSAWGTSMILAYEYLK 271
>TC18745 weakly similar to UP|ADT2_HUMAN (P05141) ADP,ATP carrier protein,
fibroblast isoform (ADP/ATP translocase 2) (Adenine
nucleotide translocator 2) (ANT 2), partial (9%)
Length = 834
Score = 42.7 bits (99), Expect = 3e-05
Identities = 26/75 (34%), Positives = 39/75 (51%), Gaps = 2/75 (2%)
Frame = +3
Query: 22 IGGMLSAGTTHLATTPLDVLKVNM--QVHPIKYYSISSCFTTLLREQGPSVLWKGWTGKF 79
+GG L+ T+ AT PLD+++ + Q I Y IS F+T+ R++G L+KG
Sbjct: 606 MGGGLAGVTSASATYPLDLVRTRLAAQRSTIYYRGISHAFSTICRDEGFLGLYKGLGATL 785
Query: 80 FGYGAQGGCRFGLYE 94
G G F +YE
Sbjct: 786 LGVGPSIAISFSVYE 830
>AV771915
Length = 490
Score = 42.0 bits (97), Expect = 6e-05
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Frame = +1
Query: 27 SAGTTHLATTPLDVLKVNMQVHPI----------KYYSISSCFTTLLREQGPSVLWKGWT 76
SA + T PLD KV +Q+ KY + T+ RE+G + LWKG
Sbjct: 73 SACLAEVCTIPLDTAKVRLQLQKQALTGDGVALPKYKGM*GTVATIAREEGLASLWKGIV 252
Query: 77 GKFFGYGAQGGCRFGLYEYFKGVY 100
GG R GLYE K +Y
Sbjct: 253 PGLHRQCVYGGLRVGLYEPVKTLY 324
>TC11347 similar to GB|AAO63393.1|28950939|BT005329 At2g26360 {Arabidopsis
thaliana;}, partial (18%)
Length = 558
Score = 40.0 bits (92), Expect = 2e-04
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +3
Query: 29 GTTHLATTPLDVLKVNMQVHPIKYYSISSCFTTLLREQGPSVLWKGWTGKFFGYGAQGGC 88
G + TTP DV+K M + S++ ++L +GP L+KG +FF G
Sbjct: 3 GLASVTTTPFDVIKTRMMTTQGQSVSMTIVALSILHHEGPLGLFKGAVPRFFSIAPLGAM 182
Query: 89 RFGLYE 94
F YE
Sbjct: 183NFAGYE 200
>TC7883 homologue to UP|ADT1_GOSHI (O22342) ADP,ATP carrier protein 1,
mitochondrial precursor (ADP/ATP translocase 1) (Adenine
nucleotide translocator 1) (ANT 1), partial (54%)
Length = 856
Score = 38.9 bits (89), Expect = 5e-04
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Frame = +2
Query: 24 GMLSAGTTHLATTPLDVLK--VNMQVHPIK-------YYSISSCFTTLLREQGPSVLWKG 74
G +SA + A P++ +K + Q IK Y IS CF ++++G LW+G
Sbjct: 293 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGISDCFGRTMKDEGVIALWRG 472
Query: 75 WTGKFFGYGAQGGCRFGLYEYFKGVYS 101
T Y F +YFK +++
Sbjct: 473 NTANVIRYFPTQALNFAFKDYFKRLFN 553
>TC19237 similar to GB|AAP42736.1|30984546|BT008723 At1g07030 {Arabidopsis
thaliana;}, partial (23%)
Length = 427
Score = 37.7 bits (86), Expect = 0.001
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +2
Query: 22 IGGMLSAGTTHLATTPLDVLKVNMQVH---PIKYYSISSCFTTLLREQGPSVLWKGWTGK 78
I G ++ H+A P+D +K +MQ PIK ++ ++L+ GPS L++G
Sbjct: 230 IAGSIAGCVEHMAMFPVDTVKTHMQALGSCPIKTGTVRQALRSILQSDGPSALYRGIGAM 409
Query: 79 FFGYG 83
G G
Sbjct: 410 GLGAG 424
>TC7935 similar to UP|O49447 (O49447) ADP, ATP carrier-like protein,
partial (83%)
Length = 1465
Score = 37.7 bits (86), Expect = 0.001
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Frame = +3
Query: 24 GMLSAGTTHLATTPLDVLK--VNMQVHPIK-------YYSISSCFTTLLREQGPSVLWKG 74
G +SA + A P++ +K + Q IK Y I CF +++G LW+G
Sbjct: 264 GGVSAAVSKTAAAPIERIKLLIQNQDEMIKSGRLSEPYKGIGDCFARTTKDEGAIALWRG 443
Query: 75 WTGKFFGYGAQGGCRFGLYEYFKGVYS 101
T Y F +YFK +++
Sbjct: 444 NTANVIRYFPTQALNFAFKDYFKRLFN 524
>TC8441 homologue to UP|ADT2_SOLTU (P27081) ADP,ATP carrier protein,
mitochondrial precursor (ADP/ATP translocase) (Adenine
nucleotide translocator) (ANT) (Fragment), partial (48%)
Length = 884
Score = 37.0 bits (84), Expect = 0.002
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 25/114 (21%)
Frame = +1
Query: 8 ISQELTPRYYALCTIGGMLSAGTTHLATTPLDVLKVNMQV---HPIKYYSISSCFTTLLR 64
++ L ++A +G +++ G LA+ P+D ++ M + +KY S FT +L+
Sbjct: 259 LTGSLQDSFFASFGLGWLITNGAG-LASYPIDTVRRRMMMTSGEAVKYKSSMDAFTQILK 435
Query: 65 EQGPSVLWKGWTGK--------------------FFG--YGAQGGCRFGLYEYF 96
+GP L+KG FFG YG+ G F Y YF
Sbjct: 436 NEGPKSLFKGAGANILRAVAGAGVLAGYDKLQVVFFGKKYGSGGA*IFSPYSYF 597
>TC7882 homologue to UP|O49875 (O49875) Adenine nucleotide translocator,
complete
Length = 1656
Score = 36.6 bits (83), Expect = 0.002
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Frame = +1
Query: 24 GMLSAGTTHLATTPLDVLK--VNMQVHPIK-------YYSISSCFTTLLREQGPSVLWKG 74
G +SA + A P++ +K + Q IK Y I CF +++G LW+G
Sbjct: 475 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKTGRLSEPYKGIGDCFARTTKDEGIVALWRG 654
Query: 75 WTGKFFGYGAQGGCRFGLYEYFKGVYS 101
T Y F +YFK +++
Sbjct: 655 NTANVIRYFPTQALNFAFKDYFKRLFN 735
>TC10512 similar to UP|Q9FI73 (Q9FI73) Mitochondrial carrier protein-like
(At5g48970), partial (43%)
Length = 563
Score = 35.8 bits (81), Expect = 0.004
Identities = 20/69 (28%), Positives = 29/69 (41%), Gaps = 18/69 (26%)
Frame = +1
Query: 24 GMLSAGTTHLATTPLDVLKVNMQVH------------------PIKYYSISSCFTTLLRE 65
G +S G + T+PLDV+K+ QV P KY + +LRE
Sbjct: 154 GAISGGISRTVTSPLDVIKIRFQVQLEPTSSWALLRRNLAATAPSKYTGMFQASKDILRE 333
Query: 66 QGPSVLWKG 74
+G W+G
Sbjct: 334 EGVQGFWRG 360
>TC11705 homologue to UP|O49875 (O49875) Adenine nucleotide translocator,
partial (38%)
Length = 580
Score = 34.3 bits (77), Expect = 0.012
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Frame = +3
Query: 24 GMLSAGTTHLATTPLDVLK--VNMQVHPIK-------YYSISSCFTTLLREQGPSVLWKG 74
G +SA + A P++ +K + Q IK Y I CFT ++++G L +G
Sbjct: 291 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFTRTMKDEGVVAL*RG 470
Query: 75 WTGKFFGYGAQGGCRFGLYEYFKGVYS 101
T Y F +YFK +++
Sbjct: 471 NTANVIRYFPTQALNFAFKDYFKRLFN 551
>TC7843 weakly similar to GB|AAF03412.1|6090963|AF188712 mitochondrial
dicarboxylate carrier {Mus musculus;} , partial (22%)
Length = 1594
Score = 30.4 bits (67), Expect = 0.17
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Frame = +3
Query: 4 MEGGISQELTPRYYALCTIGGMLSAGTTHLATTPLDVLK---VNMQVHP---IKYYSISS 57
M G+ +T + A G ++A +A+ P+DV+K +NM+V P Y
Sbjct: 927 MRDGLGTHVTASFAA-----GFVAA----VASNPVDVIKTRVMNMKVEPGAEPPYAGALD 1079
Query: 58 CFTTLLREQGPSVLWKGW 75
C +R +GP L+KG+
Sbjct: 1080CALKTVRAEGPMALYKGF 1133
>AV408895
Length = 429
Score = 30.4 bits (67), Expect = 0.17
Identities = 20/75 (26%), Positives = 34/75 (44%), Gaps = 2/75 (2%)
Frame = +3
Query: 22 IGGMLSAGTTHLATTPLDVLKVNM--QVHPIKYYSISSCFTTLLREQGPSVLWKGWTGKF 79
+GG ++ T +T PLD+++ + Q + Y I T+ +E+G L+KG
Sbjct: 195 VGGGMAGITAATSTYPLDLVRTRLAAQTNFTYYRGIWHALQTISKEEGILGLYKGLGTTL 374
Query: 80 FGYGAQGGCRFGLYE 94
G F +YE
Sbjct: 375 LTVGPNIAISFSVYE 419
>BP035958
Length = 574
Score = 30.0 bits (66), Expect = 0.22
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -2
Query: 72 WKGWTGKFFGYGAQ-GGCRFG 91
W+GW G+ G G + GGCRFG
Sbjct: 63 WRGWRGRGGGGGRRGGGCRFG 1
>BP039065
Length = 564
Score = 29.3 bits (64), Expect = 0.37
Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 9/86 (10%)
Frame = +3
Query: 24 GMLSAGTTHLATTPLDVLKVNMQVHPIKYYSISS---------CFTTLLREQGPSVLWKG 74
G ++ T PLD +K+ MQ H ++ S+ T + +E+G WKG
Sbjct: 279 GAIAGAAAKTVTAPLDRIKLLMQTHGVRVGQDSAKKAAIGFVEAITVIGKEEGIRGYWKG 458
Query: 75 WTGKFFGYGAQGGCRFGLYEYFKGVY 100
+ + YE +K ++
Sbjct: 459 NLPQVIRVIPYSAVQLFAYEIYKKIF 536
>BP056260
Length = 463
Score = 29.3 bits (64), Expect = 0.37
Identities = 13/45 (28%), Positives = 27/45 (59%), Gaps = 3/45 (6%)
Frame = -3
Query: 33 LATTPLDVLKVNMQV---HPIKYYSISSCFTTLLREQGPSVLWKG 74
+++ PLD ++ M + +KY S F+ +++++GP L+KG
Sbjct: 461 VSSYPLDTVRRRMMMTSGEAVKYQSSFDAFSPIVKKEGPKSLFKG 327
>BP047276
Length = 516
Score = 28.5 bits (62), Expect = 0.64
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Frame = +3
Query: 36 TPLDVLKVNMQVHP------IKYYSISSCFTTLLREQGPSVLWKG 74
TP +V+K+ +Q +KY C T+L E+G LW G
Sbjct: 360 TPFEVVKIKLQQQRGLSPELLKYKGPVHCARTILHEEGIRGLWAG 494
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.352 0.156 0.557
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,986,916
Number of Sequences: 28460
Number of extensions: 42392
Number of successful extensions: 431
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of query: 170
length of database: 4,897,600
effective HSP length: 84
effective length of query: 86
effective length of database: 2,506,960
effective search space: 215598560
effective search space used: 215598560
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (22.0 bits)
S2: 52 (24.6 bits)
Medicago: description of AC127019.17