TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC126786.7 - phase: 0 /pseudo
         (521 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AV426381                                                               88  3e-18
CB828765                                                               39  0.002
TC9738 homologue to UP|Q9FVD4 (Q9FVD4) Ser/Thr specific protein ...    30  1.3
TC16018 UP|Q8MZB8 (Q8MZB8) AT15479p (CG31542-PA), partial (7%)         29  2.1
AU089082                                                               29  2.1
AV407983                                                               28  2.8
AV422024                                                               28  2.8
BP036446                                                               28  3.7
BP036658                                                               28  3.7
TC16032 similar to BAC87886 (BAC87886) PGL-3, partial (4%)             28  4.8
TC12770                                                                28  4.8
TC14365 similar to UP|Q9XFC1 (Q9XFC1) Stearoyl acyl carrier prot...    27  6.2
TC9044 similar to GB|AAR21619.1|38490051|AY457043 TATA-binding p...    27  8.1
TC10427 similar to UP|Q9AU06 (Q9AU06) NADPH-cytochrome P450 oxyd...    27  8.1

>AV426381 
          Length = 430

 Score = 88.2 bits (217), Expect = 3e-18
 Identities = 44/90 (48%), Positives = 62/90 (68%)
 Frame = +2

Query: 11  RQLDVTPTWAVAAVCAIIVIISILLEKLIHKFASVFEERKKHALLEALEKIKAELMVLGF 70
           ++L+ TPTWAVA VC +++ ISI++E  I       E+R K AL EA+EKIK ELM++GF
Sbjct: 29  KKLEETPTWAVAVVCFVMLAISIIIEHGIEAIEKWLEKRHKKALHEAVEKIKGELMLMGF 208

Query: 71  ISLLLTFGQNYISKVCIPVKYSNTMLPCQP 100
           IS LLT  ++ IS +CI  + ++T  PC P
Sbjct: 209 ISFLLTVFKDPISNICISKQVASTWHPCHP 298


>CB828765 
          Length = 343

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 15/27 (55%), Positives = 19/27 (69%)
 Frame = +3

Query: 6   GGGDSRQLDVTPTWAVAAVCAIIVIIS 32
           G   S+ LD TPTWAVA VC + ++IS
Sbjct: 261 GSSSSKNLDQTPTWAVACVCTVFILIS 341


>TC9738 homologue to UP|Q9FVD4 (Q9FVD4) Ser/Thr specific protein
           phosphatase 2A B regulatory subunit beta isoform,
           partial (7%)
          Length = 695

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +1

Query: 168 YIFSFSSWLSSM*YSVPLQ*HLVEQRLKVGKNGSKTIW 205
           + F FSS+    *YS PL  HL+  + KV  N S  +W
Sbjct: 361 FFFQFSSF*FRP*YSFPLFLHLLLVKEKVQSNASYCVW 474


>TC16018 UP|Q8MZB8 (Q8MZB8) AT15479p (CG31542-PA), partial (7%)
          Length = 425

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 16/51 (31%), Positives = 24/51 (46%)
 Frame = +1

Query: 93  NTMLPCQPLAERTADHPGEPALEPQGTEHEPTPNIPAGEGESKGEHHRRLL 143
           N  +P QP   + + HP  P  +PQ      TP +P+    S  +H + LL
Sbjct: 31  NHGVPLQPRP*QLSRHPHPPPQQPQRRRRRTTPQLPS----STRQHRQPLL 171


>AU089082 
          Length = 300

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 12/22 (54%), Positives = 13/22 (58%)
 Frame = -1

Query: 149 FLGGGGGGPGCKPWTGYISYIF 170
           FLGGGGGG G   W G +   F
Sbjct: 84  FLGGGGGGFGAGVWCGVVMLRF 19


>AV407983 
          Length = 417

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 18/43 (41%), Positives = 19/43 (43%), Gaps = 6/43 (13%)
 Frame = -1

Query: 129 AGEGESKGEHHR------RLLSYERRFLGGGGGGPGCKPWTGY 165
           +GEG  KG   R      R     R  LGGGGG  G   W GY
Sbjct: 261 SGEGRKKGWRRRGRV*RGRRSGNRRGVLGGGGGVLGRGVW*GY 133


>AV422024 
          Length = 460

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 11/38 (28%), Positives = 21/38 (54%)
 Frame = -3

Query: 91  YSNTMLPCQPLAERTADHPGEPALEPQGTEHEPTPNIP 128
           ++++  P  PL   +   P EP ++   +  +PTPN+P
Sbjct: 326 HNSSAFPPLPLCSASNLAPTEPRIDRTNSRSDPTPNLP 213


>BP036446 
          Length = 522

 Score = 28.1 bits (61), Expect = 3.7
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = +3

Query: 81  YISKVCIPVKYSNTMLPCQP--LAERTADHPGEP-ALEPQGTEHEPTPNI 127
           Y SK C     S++MLPC P    + +A HP    +L P      P  N+
Sbjct: 264 YCSKCCQTAPASSSMLPCTPPSAPDSSAPHPAPSCSLPPHTRARMPACNL 413


>BP036658 
          Length = 489

 Score = 28.1 bits (61), Expect = 3.7
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 79  QNYISKVCIPVKYSNTML 96
           QNY+ KVC+P+K S  M+
Sbjct: 303 QNYMLKVCLPIKLSTNMV 250


>TC16032 similar to BAC87886 (BAC87886) PGL-3, partial (4%)
          Length = 631

 Score = 27.7 bits (60), Expect = 4.8
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
 Frame = +3

Query: 107 DHPGEPALEPQGTEHEPTPNIPAGE-----GESKGEHHRRLLSYERRFLGGGGGG 156
           D   E A+E +  EHE T    AGE      ++K +H+ R   Y+ +  G GGGG
Sbjct: 72  DVEAENAVEVEYVEHEQTNPQVAGELNQPDVDAKDQHYPR-RGYQNQRGGRGGGG 233


>TC12770 
          Length = 588

 Score = 27.7 bits (60), Expect = 4.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 104 RTADHPGEPALEPQGTEHEPTPNIPAGEGESKGE 137
           R   H  EP+ + +G EH      P  +GE++GE
Sbjct: 580 RLQGHCHEPSPKTRGKEHATNMETPKQQGENRGE 479


>TC14365 similar to UP|Q9XFC1 (Q9XFC1) Stearoyl acyl carrier protein
           desaturase Lldd3A20, partial (94%)
          Length = 1539

 Score = 27.3 bits (59), Expect = 6.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 2   GGGGGGGDSRQLDVTPTWAVAAVCAIIVIIS 32
           GGGGG G          W V  VC+++V++S
Sbjct: 148 GGGGGLG---------WWGVVTVCSVVVVVS 83


>TC9044 similar to GB|AAR21619.1|38490051|AY457043 TATA-binding protein
           associated factor 4 {Arabidopsis thaliana;} , partial
           (5%)
          Length = 580

 Score = 26.9 bits (58), Expect = 8.1
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3

Query: 96  LPCQPLAERTADHPGEPALEPQGTEHEPTPNI 127
           LPC P     A    EP L P G+   P P++
Sbjct: 170 LPCFPAEPEAARKAVEPFLSPSGSSLVPLPDV 75


>TC10427 similar to UP|Q9AU06 (Q9AU06) NADPH-cytochrome P450 oxydoreductase
           isoform 3, partial (17%)
          Length = 565

 Score = 26.9 bits (58), Expect = 8.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 131 EGESKGEHHRRLLSYERRFLGGGGGG 156
           +G+  G+HH  L   E    G GGGG
Sbjct: 287 DGDGGGKHHDELTILEEDGAGAGGGG 210


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.354    0.158    0.568 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,049,356
Number of Sequences: 28460
Number of extensions: 160476
Number of successful extensions: 3648
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2072
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 580
Number of HSP's gapped (non-prelim): 3007
length of query: 521
length of database: 4,897,600
effective HSP length: 94
effective length of query: 427
effective length of database: 2,222,360
effective search space: 948947720
effective search space used: 948947720
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.6 bits)
S2: 57 (26.6 bits)