TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC126019.1 + phase: 0 
         (253 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC9223 similar to UP|Q8H9B4 (Q8H9B4) UDP-glucose:sterol 3-O-gluc...   185  7e-48
BP057349                                                               60  3e-10
BP042070                                                               30  0.52
AW428931                                                               28  1.5
TC14184 similar to UP|Q93WZ6 (Q93WZ6) Abscisic stress ripening-l...    28  1.5
TC15990                                                                28  2.0
TC18725 similar to UP|BAC83841 (BAC83841) Late embryogenesis abu...    28  2.0
TC13771                                                                27  4.4
TC11493                                                                26  5.8
TC9079 weakly similar to UP|Q8W4G1 (Q8W4G1) UDP-glucose glucosyl...    26  5.8
TC14532 similar to UP|Q9FYA8 (Q9FYA8) SC35-like splicing factor ...    26  5.8
TC12194                                                                26  7.5
NP459570 hypothetical protein [Lotus japonicus]                        26  7.5
TC11742 similar to UP|Q9LIN8 (Q9LIN8) Similarity to alpha galact...    26  7.5
BP040442                                                               25  9.8
TC11609 similar to UP|Q8S532 (Q8S532) Cytosolic aldehyde dehydro...    25  9.8
TC14163                                                                25  9.8
AV410336                                                               25  9.8
TC9485 similar to UP|Q8S999 (Q8S999) Glucosyltransferase-10, par...    25  9.8

>TC9223 similar to UP|Q8H9B4 (Q8H9B4) UDP-glucose:sterol
           3-O-glucosyltransferase, partial (16%)
          Length = 659

 Score =  185 bits (469), Expect = 7e-48
 Identities = 91/111 (81%), Positives = 98/111 (87%), Gaps = 2/111 (1%)
 Frame = +1

Query: 145 KAACPTTIVPFFGDQPFWGERVHDRGVGPPPIPIDVFSLPKLIAAINFMLDPKVKEHAIE 204
           KAACPTTIVPFFGDQPFWG+RVHDRGVGPPPIP+D FSLPKL+ AINFMLDPKVKE AIE
Sbjct: 1   KAACPTTIVPFFGDQPFWGDRVHDRGVGPPPIPVDEFSLPKLVNAINFMLDPKVKERAIE 180

Query: 205 LAKAMENEDGVTGAVKVFFKQLP--KNKPEPNTEPSSSSCFSYIARCFGYS 253
           LAKAMENEDGVTGAVK FFKQLP  +NK EP+ +P  SS FS I+RCFG S
Sbjct: 181 LAKAMENEDGVTGAVKAFFKQLPQTRNKTEPDQQPLPSSVFS-ISRCFGCS 330


>BP057349 
          Length = 493

 Score = 60.5 bits (145), Expect = 3e-10
 Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 12/105 (11%)
 Frame = -2

Query: 137 AGTTAAGLKAACPTTIVPFFGDQPFWGERVHDRGVGPPPIPIDVFSLPK----------- 185
           +GTTAA L+A  P  + PF  DQ +W ER++  G+ P P+        K           
Sbjct: 453 SGTTAAALQAGTPQVVCPFMLDQFYWAERMYWLGISPEPLSRHHLLPDKNDDRSVQEAAH 274

Query: 186 -LIAAINFMLDPKVKEHAIELAKAMENEDGVTGAVKVFFKQLPKN 229
            L  AI+  L  +VK  AIE+A+ +  EDGV+ A+K   ++L  N
Sbjct: 273 VLSLAIHDALSSRVKTQAIEIAERLSLEDGVSEAIKCLKEELDLN 139


>BP042070 
          Length = 460

 Score = 29.6 bits (65), Expect = 0.52
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -2

Query: 176 IPIDVFSLPKLIAAINFMLDPKVKEHAIELAKAMENEDGV 215
           +P   FSLP L + +N  LDP V E  + L +   N++ +
Sbjct: 252 VPSSAFSLPPLGSTLNQDLDPPVPEGFLALGEHRPNQEDI 133


>AW428931 
          Length = 284

 Score = 28.1 bits (61), Expect = 1.5
 Identities = 10/19 (52%), Positives = 12/19 (62%)
 Frame = -3

Query: 148 CPTTIVPFFGDQPFWGERV 166
           CPT I+ FF   PFW  R+
Sbjct: 222 CPTLILSFFSSCPFWPSRL 166


>TC14184 similar to UP|Q93WZ6 (Q93WZ6) Abscisic stress ripening-like
           protein, partial (57%)
          Length = 1141

 Score = 28.1 bits (61), Expect = 1.5
 Identities = 23/58 (39%), Positives = 26/58 (44%)
 Frame = +3

Query: 89  TTGQRGIISKGWGGLGDLTEPKDSIYLLDNVPHDWLFLHCKAVVHHGGAGTTAAGLKA 146
           T G  G  S G GG G+     DS    D V +     H K + H G  GTTAAG  A
Sbjct: 456 TGGGGGGYSTGGGGYGN----DDSGNRRDEVDYKEEEKHHKKLEHLGELGTTAAGAYA 617


>TC15990 
          Length = 721

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 16/52 (30%), Positives = 25/52 (47%)
 Frame = -2

Query: 198 VKEHAIELAKAMENEDGVTGAVKVFFKQLPKNKPEPNTEPSSSSCFSYIARC 249
           ++EH+    K   + DG T  + +    L   K + N E S S C+  I+RC
Sbjct: 576 IEEHSSVCPKTFNHSDGFTIDI-ILMHPLFLLKSDAN*EASKSQCY*LISRC 424


>TC18725 similar to UP|BAC83841 (BAC83841) Late embryogenesis abundant
           proteins-like, partial (39%)
          Length = 552

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -1

Query: 229 NKPEPNTEPSSSSCFSYIAR 248
           N P P++ PSSS CFS++ R
Sbjct: 126 NPPLPSSLPSSSLCFSFLKR 67


>TC13771 
          Length = 474

 Score = 26.6 bits (57), Expect = 4.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 55  KWLEDGDKPIYVGFGSLP 72
           KW +D  KP+ VGF S P
Sbjct: 467 KWKQDPTKPVXVGFFSFP 414


>TC11493 
          Length = 276

 Score = 26.2 bits (56), Expect = 5.8
 Identities = 15/47 (31%), Positives = 25/47 (52%), Gaps = 3/47 (6%)
 Frame = +1

Query: 2   CNLLYIFKKLT---QVILLSIKYIIFLFADWGPKIDVVGFCFLDLAS 45
           CNL  +F   T   Q +    ++I+F F  +G  +D++G C + L S
Sbjct: 106 CNLDKVFVL*TPSDQYLCFW*RWIVFGFVYFGRSLDLLGLCSMTLCS 246


>TC9079 weakly similar to UP|Q8W4G1 (Q8W4G1) UDP-glucose
           glucosyltransferase, partial (65%)
          Length = 1585

 Score = 26.2 bits (56), Expect = 5.8
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +1

Query: 43  LASN-YEPPESLVKWLEDGD--KPIYVGFGSLPVQDPKTMTE 81
           L SN ++     ++WLE  +    +YV FGS+ V  P+ + E
Sbjct: 811 LGSNLWKEDTKCLQWLESKEPGSVVYVNFGSITVMSPEQLLE 936


>TC14532 similar to UP|Q9FYA8 (Q9FYA8) SC35-like splicing factor SCL30a, 30a
            kD, partial (71%)
          Length = 1073

 Score = 26.2 bits (56), Expect = 5.8
 Identities = 13/41 (31%), Positives = 22/41 (52%), Gaps = 3/41 (7%)
 Frame = -3

Query: 41   LDLASNYEPPE---SLVKWLEDGDKPIYVGFGSLPVQDPKT 78
            + L SN++  E   S + WL+D  + I +   S+P+   KT
Sbjct: 1059 MQLQSNFQTTEQFKSTLPWLKDKHQDIKIAANSIPMSTTKT 937


>TC12194 
          Length = 537

 Score = 25.8 bits (55), Expect = 7.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 20  KYIIFLFADWGPKIDVVGFCFLD 42
           K +I   + WG ++ +V +CF D
Sbjct: 409 KILILCLSIWGRRVKIVNYCFSD 477


>NP459570 hypothetical protein [Lotus japonicus]
          Length = 972

 Score = 25.8 bits (55), Expect = 7.5
 Identities = 11/38 (28%), Positives = 20/38 (51%)
 Frame = +1

Query: 95  IISKGWGGLGDLTEPKDSIYLLDNVPHDWLFLHCKAVV 132
           I ++G+   G LTE   S+ L+  +   WL +H   ++
Sbjct: 319 IFTQGFATSGLLTEMHQSVILVPALQSHWLMMHVSMMI 432


>TC11742 similar to UP|Q9LIN8 (Q9LIN8) Similarity to alpha galactosidase,
           partial (18%)
          Length = 549

 Score = 25.8 bits (55), Expect = 7.5
 Identities = 18/70 (25%), Positives = 32/70 (45%)
 Frame = -1

Query: 154 PFFGDQPFWGERVHDRGVGPPPIPIDVFSLPKLIAAINFMLDPKVKEHAIELAKAMENED 213
           PF+G +P    R H     PPP    +     +++ ++F   P +  H+I ++  ME   
Sbjct: 423 PFYGRRPPSRVRNH-----PPPFINHIKPKRIMMSTLDFPSIP*IIHHSILVSMIMETLR 259

Query: 214 GVTGAVKVFF 223
              G ++ FF
Sbjct: 258 NYFGILQEFF 229


>BP040442 
          Length = 546

 Score = 25.4 bits (54), Expect = 9.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 227 PKNKPEPNTEPSSSSCFSY 245
           P+ KP+P   P S +CF +
Sbjct: 325 PQPKPQPQRTPKSQNCFQH 269


>TC11609 similar to UP|Q8S532 (Q8S532) Cytosolic aldehyde dehydrogenase
           RF2C, partial (25%)
          Length = 600

 Score = 25.4 bits (54), Expect = 9.8
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -2

Query: 56  WLEDGDKPIYVGFG-SLPVQDPKTMTEIIVEALE 88
           WL D DKP    FG  + VQ   T T  I++A E
Sbjct: 485 WLHDNDKPKVK*FGPPISVQSLSTSTNEILKAKE 384


>TC14163 
          Length = 1712

 Score = 25.4 bits (54), Expect = 9.8
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +1

Query: 8    FKKLTQVILLSIKYIIFLFADWGPKIDVVGFCFLDLASNYEPPESLVKWL 57
            FK LT++  L++     L  D  P+++V G   LDL++N      + KW+
Sbjct: 982  FKNLTKIFNLNLANN--LLVDPFPEMNVKGIESLDLSNNMFHLNQIPKWV 1125


>AV410336 
          Length = 358

 Score = 25.4 bits (54), Expect = 9.8
 Identities = 25/86 (29%), Positives = 36/86 (41%)
 Frame = -3

Query: 129 KAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHDRGVGPPPIPIDVFSLPKLIA 188
           K VV  GG G  AAG    C    V FFG      E    R  G   + +DV  +  ++A
Sbjct: 344 KRVVEDGG-GEEAAGGGDECWGGAVGFFGSNEAAVEDAAGRDDGGGGVGVDVDVVKVVVA 168

Query: 189 AINFMLDPKVKEHAIELAKAMENEDG 214
              F+  P+  E  + + +  E + G
Sbjct: 167 GEEFL--PEWGEGEVGVGEEEEGDFG 96


>TC9485 similar to UP|Q8S999 (Q8S999) Glucosyltransferase-10, partial (75%)
          Length = 1195

 Score = 25.4 bits (54), Expect = 9.8
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +1

Query: 43  LASN-YEPPESLVKWLE--DGDKPIYVGFGSLPVQDPKTMTE 81
           L SN ++     +KWL+  + +  +YV FGS+ V   + M E
Sbjct: 880 LGSNLWKEDSECLKWLDTKEPNSVVYVNFGSITVMTSEQMVE 1005


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.322    0.142    0.453 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,521,117
Number of Sequences: 28460
Number of extensions: 80793
Number of successful extensions: 476
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 474
length of query: 253
length of database: 4,897,600
effective HSP length: 88
effective length of query: 165
effective length of database: 2,393,120
effective search space: 394864800
effective search space used: 394864800
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)