BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126009.11 - phase: 0
(176 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC10483 weakly similar to UP|Q9M510 (Q9M510) Dicyanin, partial (... 93 2e-20
TC17588 similar to UP|BCP_PEA (Q41001) Blue copper protein precu... 90 2e-19
AU089318 89 4e-19
TC12474 weakly similar to UP|O82576 (O82576) Blue copper protein... 82 7e-17
TC7897 weakly similar to UP|ENL2_ARATH (Q9T076) Early nodulin-li... 79 3e-16
TC16136 similar to UP|Q9ZRV5 (Q9ZRV5) Basic blue copper protein,... 76 3e-15
TC12447 weakly similar to GB|AAM63773.1|21555085|AY086719 phytoc... 74 2e-14
TC12369 weakly similar to UP|ENL1_ARATH (Q9SK27) Early nodulin-l... 71 1e-13
TC14275 weakly similar to UP|Q9M510 (Q9M510) Dicyanin, partial (... 70 2e-13
TC13215 similar to UP|Q39040 (Q39040) Lamin, partial (15%) 67 2e-12
TC19996 weakly similar to UP|ENL1_ARATH (Q9SK27) Early nodulin-l... 64 1e-11
AV407087 59 4e-10
TC17556 similar to UP|Q39131 (Q39131) Lamin (AT5G15350/F8M21_240... 57 2e-09
TC14908 weakly similar to PIR|A86218|A86218 protein T27G7.18 [im... 54 1e-08
TC9870 weakly similar to UP|NO16_MEDTR (P93328) Early nodulin 16... 49 5e-07
TC14276 weakly similar to UP|Q9M510 (Q9M510) Dicyanin, partial (... 46 3e-06
AV413520 40 2e-04
AV764731 40 2e-04
BP046587 38 0.001
TC17387 35 0.006
>TC10483 weakly similar to UP|Q9M510 (Q9M510) Dicyanin, partial (24%)
Length = 552
Score = 93.2 bits (230), Expect = 2e-20
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 7/160 (4%)
Frame = +3
Query: 1 MALSRALFLFALIAS--IFSTMAVAKDFVVGDEKGWTTLFD----YQTWTANKVFRLGDT 54
MA + + L AL+A+ +F T + VVGD GWT Y W ANK F +GDT
Sbjct: 87 MARNMNVLLLALLAATTLFHTSSAQTRHVVGDSTGWTIPTGGASFYTNWAANKTFSVGDT 266
Query: 55 LTFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENG 114
L FN+ G+ NV +V S F SCS ++++G + +T G + +I + HC G
Sbjct: 267 LVFNFANGQHNVAKVTKSAFDSCSGSSPVTLISTGPATVTLTETGVQHFICAFGGHCSAG 446
Query: 115 QKLFIT-VQPKQDGWSPVPSPSPSPSLDLVTPEAPPSNAP 153
QKL +T V K +P P P+P S P P ++P
Sbjct: 447 QKLAVTXVAGKASNNAPAPVPAPKSS-----PVPAPKSSP 551
>TC17588 similar to UP|BCP_PEA (Q41001) Blue copper protein precursor,
partial (61%)
Length = 747
Score = 90.1 bits (222), Expect = 2e-19
Identities = 54/145 (37%), Positives = 73/145 (50%)
Frame = +1
Query: 22 VAKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVPL 81
+A + VGD GW DY TWT++K F +GD+L FNY G V V SD+KSC+
Sbjct: 1 LATVYSVGDTSGWAAGADYSTWTSDKTFAVGDSLVFNY-GAGHTVDEVKESDYKSCTTGN 177
Query: 82 TAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFITVQPKQDGWSPVPSPSPSPSLD 141
+ +SG+ I + T G ++I SV HC G KL +TV+ +P S SPS
Sbjct: 178 SLSTDSSGKTTIALKTAGTHYFICSVPGHCSGGMKLAVTVKGAASFTTP-SSGKGSPSTT 354
Query: 142 LVTPEAPPSNAPWPASSVPRRSLLP 166
TP + + P S SL P
Sbjct: 355 TGTPTSTTTTPPALTDSSSGDSLSP 429
>AU089318
Length = 641
Score = 89.0 bits (219), Expect = 4e-19
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
Frame = +3
Query: 1 MALSRALFLFALIASIFSTMAVAKDFVVGDEKGWTTL--FDYQTWTANKVFRLGDTLTFN 58
M L + + ++ ++ A VGD GWT L DY+ W A F++GDT+ F
Sbjct: 33 MTLVQRAVVLVMVVMAAVQVSYAAVHKVGDSAGWTILGNVDYKKWAAPXNFQVGDTIIFE 212
Query: 59 YVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLF 118
Y NV+RV + + +C+ ++G D I IT +G ++ V HC+ GQK+
Sbjct: 213 YNAQFHNVMRVTHAMYXTCNASSPIATFSTGNDSIKITNHGHHFFFCGVPGHCQAGQKVD 392
Query: 119 ITVQPKQDGWSPVPSPSPSPSLDLVTPEAPPSNAPWPA 156
I V + P+P+P+PS + P +N P P+
Sbjct: 393 INVISVSAATAAAPTPTPAPSSPSSSLATPSANVPAPS 506
>TC12474 weakly similar to UP|O82576 (O82576) Blue copper protein
(Fragment), partial (44%)
Length = 818
Score = 81.6 bits (200), Expect = 7e-17
Identities = 55/166 (33%), Positives = 76/166 (45%), Gaps = 6/166 (3%)
Frame = +1
Query: 1 MALSRALFLFALIAS--IFSTMAVAKDFVVGDEKGW----TTLFDYQTWTANKVFRLGDT 54
MA++ L AL+A+ +F + VVGD GW T F Y +W A F +GDT
Sbjct: 76 MAMNMNALLLALLAATALFHCSSAQTRHVVGDSAGWFVPGNTSF-YTSWAAKNTFAVGDT 252
Query: 55 LTFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENG 114
L FNY NV V +++ SC+ T+ + I G ++I V HC
Sbjct: 253 LVFNYAASAHNVEEVTKTNYDSCNSTSPIATYTTPPVTVTIKKTGAHYFICGVPGHCLGD 432
Query: 115 QKLFITVQPKQDGWSPVPSPSPSPSLDLVTPEAPPSNAPWPASSVP 160
QKL I V +P PS + +P TP PPS+ P+ S P
Sbjct: 433 QKLSINVASGSSAATP-PSSTATPPSSSTTP-PPPSSTTTPSPSSP 564
>TC7897 weakly similar to UP|ENL2_ARATH (Q9T076) Early nodulin-like protein
2 precursor (Phytocyanin-like protein), partial (31%)
Length = 1482
Score = 79.3 bits (194), Expect = 3e-16
Identities = 53/171 (30%), Positives = 73/171 (41%), Gaps = 5/171 (2%)
Frame = +3
Query: 1 MALSRALFLFALIASIFSTMAVAKDFVVGDEKGW--TTLFDYQTWTANKVFRLGDTLTFN 58
M R L L L+ S+ + K F VG KGW Y W F++ DT+ F
Sbjct: 141 MEFQRPLCLLFLLFSLLPSSQAHK-FYVGGSKGWIPNPSESYTLWAGRNRFQIKDTIVFK 317
Query: 59 YVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLF 118
Y G D+V+ V DF +C+ G + G ++IS +CE GQK+
Sbjct: 318 YTKGSDSVLEVKKEDFDNCNKANPIKKFEDGDTEFTFDRSGPFYFISGKDGNCEKGQKMI 497
Query: 119 ITV---QPKQDGWSPVPSPSPSPSLDLVTPEAPPSNAPWPASSVPRRSLLP 166
+ V + Q SP P SPSPS P P A P+ + S+LP
Sbjct: 498 LVVISPRGTQPPPSPPPKSSPSPSPKASPPSGSPPTAGEPSPAGTPPSVLP 650
>TC16136 similar to UP|Q9ZRV5 (Q9ZRV5) Basic blue copper protein, partial
(82%)
Length = 872
Score = 76.3 bits (186), Expect = 3e-15
Identities = 41/99 (41%), Positives = 58/99 (58%)
Frame = +1
Query: 21 AVAKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVP 80
A A + VG GW+ F+ TW K FR GD L FNY NVV V+ S +KSC+ P
Sbjct: 163 ANAATYTVGGPAGWS--FNTDTWPNGKKFRAGDVLIFNYDSTTHNVVAVDQSGYKSCTTP 336
Query: 81 LTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFI 119
A VL+SG+D+I + G+ ++I + HC++G K+ I
Sbjct: 337 AGAKVLSSGKDQIRLGR-GQNYFICNCPGHCQSGMKVAI 450
>TC12447 weakly similar to GB|AAM63773.1|21555085|AY086719
phytocyanin-related protein-like {Arabidopsis thaliana;}
, partial (56%)
Length = 735
Score = 73.6 bits (179), Expect = 2e-14
Identities = 51/158 (32%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Frame = +3
Query: 1 MALSRALFLFALIASIFSTMAVAKDFVVGDEK-GW----TTLFDYQTWTANKVFRLGDTL 55
MA S A L + FS AK+ +VG + W + W F++GD L
Sbjct: 51 MAGSSASLLLLFLLFGFSA---AKELLVGGKTDAWKVPSSEADSLNQWAEKSRFKVGDYL 221
Query: 56 TFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQ 115
+ Y GGKD+V++VN D+ SC+ G K+ + G ++IS HCE GQ
Sbjct: 222 VWKYDGGKDSVLQVNKEDYGSCNTSNPIEEYKDGNTKVKLDRPGPHYFISGAKGHCEKGQ 401
Query: 116 KLFITVQPKQDGWSPVPSPSPSPS-LDLVTPEAPPSNA 152
KLF+ V + SP+ SP+ L+ AP S+A
Sbjct: 402 KLFVVVMTPKHSRDRAISPASSPAELEEGPAVAPTSSA 515
>TC12369 weakly similar to UP|ENL1_ARATH (Q9SK27) Early nodulin-like protein
1 precursor (Phytocyanin-like protein), partial (47%)
Length = 574
Score = 70.9 bits (172), Expect = 1e-13
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Frame = +1
Query: 43 WTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRW 102
W F++GD L + Y GGKD+V+ V+ D++ C++ G K+ + G +
Sbjct: 19 WAQRDRFQIGDHLVWKYDGGKDSVLEVSKEDYEKCNISSPIKEYNDGNTKVKLDHPGPFY 198
Query: 103 YISSVTDHCENGQKLFITVQPKQDGWSPVPSPSPSP-SLDLVTPEAPPSNAPWPASS 158
+IS HCE GQKL + V + G + SP+P S + T P+ AP P SS
Sbjct: 199 FISGAKGHCEKGQKLVVVVLSPRGGRNTGTDVSPAPASAPVPTGFEGPAVAPSPVSS 369
>TC14275 weakly similar to UP|Q9M510 (Q9M510) Dicyanin, partial (25%)
Length = 562
Score = 70.5 bits (171), Expect = 2e-13
Identities = 39/113 (34%), Positives = 53/113 (46%)
Frame = +1
Query: 40 YQTWTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYG 99
Y+TW + K F++GD L FNY NV V + SC+ T+ ++ I G
Sbjct: 4 YRTWASGKTFKVGDILVFNYAASAHNVEEVTKQKYDSCNSTSPIATYTTPPVRVTIKKTG 183
Query: 100 RRWYISSVTDHCENGQKLFITVQPKQDGWSPVPSPSPSPSLDLVTPEAPPSNA 152
++I V HC GQKL I V +P S SPSPS T PP ++
Sbjct: 184 AHYFICGVPGHCLGGQKLSINVTGGSSTATPPSSASPSPSPSSST--TPPQDS 336
>TC13215 similar to UP|Q39040 (Q39040) Lamin, partial (15%)
Length = 452
Score = 66.6 bits (161), Expect = 2e-12
Identities = 38/127 (29%), Positives = 62/127 (47%), Gaps = 4/127 (3%)
Frame = +2
Query: 1 MALSRALFLFALIASIFSTMAV----AKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLT 56
MA S + +L+ F T + A D +VG +GW +Y W N+ F +GD ++
Sbjct: 53 MAASSSHLTCSLLLLTFITFTISPVTATDHIVGANRGWNPGQNYTLWANNQTFYVGDFIS 232
Query: 57 FNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQK 116
F Y + NV VN + + +C+ +SG+D I++ GR ++I C NG K
Sbjct: 233 FRYQKNQYNVFEVNQTGYDNCTTEGAFGNYSSGKDFIMLNKTGRHYFICG-NGQCFNGMK 409
Query: 117 LFITVQP 123
+ + V P
Sbjct: 410 VSVVVHP 430
>TC19996 weakly similar to UP|ENL1_ARATH (Q9SK27) Early nodulin-like protein
1 precursor (Phytocyanin-like protein), partial (36%)
Length = 458
Score = 63.9 bits (154), Expect = 1e-11
Identities = 30/102 (29%), Positives = 46/102 (44%)
Frame = +3
Query: 3 LSRALFLFALIASIFSTMAVAKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYVGG 62
+++ + L+ + D VGD GW DY TW + K F++GD L F Y
Sbjct: 75 MAKTMVASLLVLLVAFPTVFGADHTVGDASGWNIGVDYTTWASGKTFKVGDNLVFTYSSS 254
Query: 63 KDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYI 104
V V+ S +KSCS + G K+ +T G ++I
Sbjct: 255 LHGVDEVDESSYKSCSTSSPIKTYSDGNTKVALTKAGTLYFI 380
>AV407087
Length = 363
Score = 59.3 bits (142), Expect = 4e-10
Identities = 32/115 (27%), Positives = 57/115 (48%), Gaps = 1/115 (0%)
Frame = +3
Query: 1 MALSRALFLFALIASIFSTMAVAKDFVVGDEKG-WTTLFDYQTWTANKVFRLGDTLTFNY 59
M + + + +L+A++ +A+A D +VG G W + Q+W ++ F +GD L F Y
Sbjct: 24 MGVLQVIIRLSLVATLIK-LAMATDHIVGGPNGGWDATSNLQSWGTSQQFSVGDNLIFQY 200
Query: 60 VGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENG 114
NV+ V +D+ SC + G I +++ G+R++I HC G
Sbjct: 201 -QPNHNVIEVTKADYDSCQATSPIQSYSDGATTIPLSSPGKRYFICGAIGHCTQG 362
>TC17556 similar to UP|Q39131 (Q39131) Lamin (AT5G15350/F8M21_240), partial
(68%)
Length = 595
Score = 56.6 bits (135), Expect = 2e-09
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Frame = +2
Query: 23 AKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSV--P 80
AK ++VGD K W +Y W +K F + D L F Y + NV+ VN +++++C P
Sbjct: 167 AKRWLVGDGKFWNPNVNYTVWARDKHFYIDDWLFFVYDRNQMNVLEVNKTNYENCIAEHP 346
Query: 81 LTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFITVQPKQDGWSPVPSPSPSPSL 140
+ +G+D ++ R +Y S C G KL + V+ P + +PSL
Sbjct: 347 IHNWTTGAGRD-VVPLNVTRHYYFISGNGFCYGGMKLAVRVEKLPPPPKAAPEKAGAPSL 523
Query: 141 D-----LVTPEAPPSNAPWPA 156
L+ P A W A
Sbjct: 524 SSRGAILLMPVVFAIGAAWDA 586
>TC14908 weakly similar to PIR|A86218|A86218 protein T27G7.18 [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;}, partial
(68%)
Length = 1219
Score = 54.3 bits (129), Expect = 1e-08
Identities = 54/191 (28%), Positives = 72/191 (37%), Gaps = 31/191 (16%)
Frame = +2
Query: 8 FLFALIASIFSTMAVAKDFVVGDEKGWTTLFD-----YQTWTANKVFRLGDTLTFNYVGG 62
FL LI ++ K++ VGD GW + YQ W ANK F LGD L FN
Sbjct: 149 FLLLLIFCFSGSVEAYKNYTVGDSLGWFDNLEKPHVNYQKWVANKEFSLGDFLIFNTDTN 328
Query: 63 KDNVVRVNGSDFKSCSV----------------------PLTA--PVLTSGQDKIIITTY 98
V N + +K C P+TA P++ G + + Y
Sbjct: 329 HTVVQTYNFTTYKQCDYNDAQDKDTTQWSSSDPSNTEIHPVTAAVPLVKEGMNYFFSSDY 508
Query: 99 GRRWYISSVTDHCENGQKLFITVQPKQDGWSPVPSPSPSPSLDLVTPEAPPS--NAPWPA 156
D C+NGQ I V Q +P SPS D +P +P S + P
Sbjct: 509 D--------GDQCKNGQHFKINVTYGQG----LPKSLRSPSEDSPSPASPVSGDDDAAPD 652
Query: 157 SSVPRRSLLPK 167
+ VP PK
Sbjct: 653 TIVPSNFSHPK 685
>TC9870 weakly similar to UP|NO16_MEDTR (P93328) Early nodulin 16 precursor
(N-16), partial (31%)
Length = 581
Score = 48.9 bits (115), Expect = 5e-07
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Frame = +1
Query: 55 LTFNYVGGKDNVVRVNGSDFKSCSVP-LTAPVLTSGQDKIIITTYGRRWYISSVTDHCEN 113
L F Y ++V VN D+ C V V G +K++ G +IS DHC+
Sbjct: 1 LIFTYDNETESVHVVNEEDYLKCKVEGEDHEVYLEGYNKVVFNRSGSHLFISGKDDHCKM 180
Query: 114 GQKLFITVQPKQ----------DGWSPVPSPSPSPSLDLVTPEAPPSNAPWPASS 158
G KL + V + D S PSPSP+PS + P+ +P PAS+
Sbjct: 181 GLKLAVVVMSHRHHTEILSSNSDPSSLSPSPSPAPS-----SSSSPTPSPSPASN 330
>TC14276 weakly similar to UP|Q9M510 (Q9M510) Dicyanin, partial (16%)
Length = 624
Score = 46.2 bits (108), Expect = 3e-06
Identities = 30/91 (32%), Positives = 39/91 (41%), Gaps = 1/91 (1%)
Frame = +3
Query: 69 VNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFITVQPKQDGW 128
V + SC+ T+ ++ I G ++I V HC GQKL I V
Sbjct: 3 VTKQKYDSCNSTSPIATYTTPPVRVTIKKTGAHYFICGVPGHCLGGQKLSINVTGGSSTA 182
Query: 129 SPVPSPSPSPS-LDLVTPEAPPSNAPWPASS 158
+P S SPSPS TP S P P+SS
Sbjct: 183 TPPSSASPSPSPSSSTTPSPSSSTTPSPSSS 275
>AV413520
Length = 280
Score = 40.4 bits (93), Expect = 2e-04
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +1
Query: 6 ALFLFALIASIFSTMAVAKDFVVGDEKGWTTLFD-----YQTWTANKVFRLGDTLTFNYV 60
AL F L+ + + A +FVVG +KGW+ D + W F++GD+L FNY
Sbjct: 100 ALGWFCLLLMVHKSAAY--EFVVGGQKGWSVPSDPNFNPFNQWAEKSRFQVGDSLVFNYQ 273
Query: 61 GG 62
G
Sbjct: 274 SG 279
>AV764731
Length = 166
Score = 40.4 bits (93), Expect = 2e-04
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2
Query: 26 FVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSC 77
+ VG GWT F+ W K FR DTL + + G NVV VN + + +C
Sbjct: 2 YTVGGAGGWT--FNTVGWPKGKRFRAADTLEYKFGAGAHNVVAVNKAAYDTC 151
>BP046587
Length = 502
Score = 37.7 bits (86), Expect = 0.001
Identities = 20/69 (28%), Positives = 34/69 (48%)
Frame = -3
Query: 55 LTFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENG 114
+ F Y + NV VN + + +C+ +SG+D I++ GR ++I C NG
Sbjct: 464 VAFRYQKNQYNVFEVNQTGYDNCTTEGAFGNYSSGKDFIMLNKTGRHYFICG-NGQCFNG 288
Query: 115 QKLFITVQP 123
K+ + V P
Sbjct: 287 MKVSVVVHP 261
>TC17387
Length = 586
Score = 35.4 bits (80), Expect = 0.006
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +1
Query: 105 SSVTDHCENGQKLFITVQPKQDGWSPVPSPSPSPSLDLVTPEAPPSNAPWPASSVPR 161
++ T Q + IT K + +PV P S + L E PPS++P PASS PR
Sbjct: 172 TTTTTSLIQNQGIAITSFGKMERSTPVRKPHTSTADLLTWSETPPSDSPAPASSAPR 342
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.319 0.135 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,401,069
Number of Sequences: 28460
Number of extensions: 56996
Number of successful extensions: 1409
Number of sequences better than 10.0: 303
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of query: 176
length of database: 4,897,600
effective HSP length: 84
effective length of query: 92
effective length of database: 2,506,960
effective search space: 230640320
effective search space used: 230640320
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)
Medicago: description of AC126009.11