
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126008.6 + phase: 0
(530 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC8113 weakly similar to UP|O23213 (O23213) Sugar transporter li... 405 e-114
TC9818 similar to UP|Q7XA50 (Q7XA50) Sorbitol-like transporter, ... 322 7e-89
TC16504 weakly similar to UP|Q84KI7 (Q84KI7) Sorbitol transporte... 223 6e-59
AV766904 218 2e-57
CB826772 149 1e-36
CB828147 136 7e-33
TC12858 weakly similar to UP|Q9ZS76 (Q9ZS76) Hexose transporter,... 130 7e-31
BI418774 128 3e-30
TC10359 similar to UP|Q94AZ2 (Q94AZ2) AT5g26340/F9D12_17, partia... 122 1e-28
TC19365 weakly similar to UP|O23213 (O23213) Sugar transporter l... 117 4e-27
TC10748 similar to UP|Q7XA50 (Q7XA50) Sorbitol-like transporter,... 112 2e-25
TC12545 similar to UP|Q7XA50 (Q7XA50) Sorbitol-like transporter,... 107 6e-24
TC10135 98 3e-21
BI420004 92 2e-19
TC16378 similar to GB|AAM70554.1|21700861|AY124845 At1g75220/F22... 89 1e-18
BP074036 89 2e-18
BP058370 89 2e-18
TC12303 similar to GB|CAB10424.1|2245004|ATFCA6 membrane transpo... 85 3e-17
CB829587 81 5e-16
TC19595 79 2e-15
>TC8113 weakly similar to UP|O23213 (O23213) Sugar transporter like
protein, partial (93%)
Length = 1865
Score = 405 bits (1041), Expect = e-114
Identities = 206/476 (43%), Positives = 309/476 (64%), Gaps = 15/476 (3%)
Frame = +2
Query: 45 EDKRNSTRKYVIACAIFASLNNVLLGYDVGVMSGAVIFIKEDLKITEVQVEFLIGILSIV 104
EDK + KY +AC I AS+ +++ GYD GVMSGA++FIKED+ I++ Q E L GIL+I
Sbjct: 86 EDKDTTINKYALACVIVASMVSIISGYDTGVMSGALLFIKEDIGISDTQQEVLAGILNIC 265
Query: 105 SLLGSLGGGRTSDIIGRKWTMALAAVVFQMGGITMTLAPSYQVLMIGRLLAGIGIGFGVM 164
+L+G L G+TSD IGR++T+ LA+++F +G + M P++ +LM GR + G+G+GF +
Sbjct: 266 ALVGCLAAGKTSDYIGRRYTIFLASILFLVGAVFMGYGPNFAILMFGRCVCGLGVGFALT 445
Query: 165 ISPIYIAEISPNLTRGSLTTFPEIFINVGIMLGYVSNYAFSGLSVHISWRVMLAVGILPS 224
+P+Y AE+S TRG LT+ PE+ I +GI +GY+SNY L++ + WR+ML + +PS
Sbjct: 446 TAPVYSAELSSASTRGFLTSLPEVCIGLGIFIGYISNYFLGKLALTLGWRLMLGLAAIPS 625
Query: 225 VFIGFALFIIPESPRWLVMQNRIEEARSVLLKTNEDEKEVEERLAEIQQAAGFAN----- 279
+ + + +PESPRWLVMQ R+ A+ VLL+ + +E E R +I +AGF
Sbjct: 626 LGLALGILTMPESPRWLVMQGRLGCAKKVLLEVSNTTEEAELRFRDIIVSAGFDEKCNDE 805
Query: 280 -----SGKYEDKPVWREL-LSPPPALRRMLITGLGIQCFQQISGIDATVYYSPEILMAAG 333
+ + VW+EL L P P +RRMLI +GI F+ +GI+A + Y P I AG
Sbjct: 806 FVKQPQKSHHGEGVWKELFLRPTPPVRRMLIAAVGIHFFEHATGIEAVMLYGPRIFKKAG 985
Query: 334 IEDKSKLLAATVAVGITKTVFILVAIVLIDKVGRKPLLITSTIGMTACLFCMGVTLSLF- 392
+ K +LL AT+ G+TK F+ ++ L+D+VGR+ LL S GM L +G +L++
Sbjct: 986 VTTKDRLLLATIGTGLTKITFLTISTFLLDRVGRRRLLQISVAGMIFGLTILGFSLTMVE 1165
Query: 393 ---EKGPLVIALGILFVCGNVAFFSVGLGPVCWVLTSEIFPLRVRAQASALGAVANRVCS 449
EK ++L I+ VAFF+VGL PV WV +SEIFPLR+RAQ +++G NR +
Sbjct: 1166YSSEKLVWALSLSIVATYTYVAFFNVGLAPVTWVYSSEIFPLRLRAQGNSIGVAVNRGMN 1345
Query: 450 GLVAMSFLSVSDAISFGGTFFLFSAISALAIVFVFTLVPETKGKSLEQIEMMFENE 505
++MSF+S+ AI+ GG FFLF+ +S +A VF + +PETKGK+LE++EM+F +
Sbjct: 1346AAISMSFISIYKAITIGGAFFLFAGMSVVAWVFFYFCLPETKGKALEEMEMVFSKK 1513
>TC9818 similar to UP|Q7XA50 (Q7XA50) Sorbitol-like transporter, partial
(62%)
Length = 1162
Score = 322 bits (826), Expect = 7e-89
Identities = 165/327 (50%), Positives = 229/327 (69%), Gaps = 14/327 (4%)
Frame = +2
Query: 40 HQQQLED----KRNSTRKYVIACAIFASLNNVLLGYDVGVMSGAVIFIKEDLKITEVQVE 95
+Q+ L+D K+ KY ACA+ AS+ ++LLGYD+GVMSGA I+IK DLK+++V++E
Sbjct: 179 NQKNLQDFDPQKKPKRNKYAFACAMLASMTSILLGYDIGVMSGAAIYIKRDLKVSDVKIE 358
Query: 96 FLIGILSIVSLLGSLGGGRTSDIIGRKWTMALAAVVFQMGGITMTLAPSYQVLMIGRLLA 155
L+GI+++ SL+GS GRTSD IGR++T+ A +F +G + M +P+Y LM GR +A
Sbjct: 359 ILLGIINLYSLIGSGLAGRTSDWIGRRYTIVFAGAIFFVGALLMGFSPNYWFLMFGRFIA 538
Query: 156 GIGIGFGVMISPIYIAEISPNLTRGSLTTFPEIFINVGIMLGYVSNYAFSGLSVHISWRV 215
GIGIG+ +MI+P+Y AE+SP +RG LT+FPE+FIN GI+LGY+SN+AFS LS+ + WR+
Sbjct: 539 GIGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYISNFAFSKLSLKVGWRM 718
Query: 216 MLAVGILPSVFIGFALFIIPESPRWLVMQNRIEEARSVLLKTNEDEKEVEERLAEIQQAA 275
ML VG LPSV +G + +PESPRWLVM+ R+ +A VL KT++ +E + RLA+I++AA
Sbjct: 719 MLGVGALPSVILGVGVLAMPESPRWLVMRGRLGDAIKVLNKTSDSPEEAQLRLADIKRAA 898
Query: 276 GFAN---------SGKYEDKPVWREL-LSPPPALRRMLITGLGIQCFQQISGIDATVYYS 325
G S + + VW+EL L P PA+R ++I LGI FQQ SGIDA V YS
Sbjct: 899 GIPESCTDDVVEVSKRSTGEGVWKELFLYPTPAIRHIVIAALGIHFFQQASGIDAVVLYS 1078
Query: 326 PEILMAAGIEDKSKLLAATVAVGITKT 352
P I AGI+ + L ATVAVG KT
Sbjct: 1079PTIFEKAGIKSDTDKLLATVAVGFVKT 1159
>TC16504 weakly similar to UP|Q84KI7 (Q84KI7) Sorbitol transporter, partial
(37%)
Length = 903
Score = 223 bits (568), Expect = 6e-59
Identities = 117/281 (41%), Positives = 174/281 (61%), Gaps = 11/281 (3%)
Frame = +2
Query: 46 DKRNSTRKYVIACAIFASLNNVLLGYDVGVMSGAVIFIKEDLKITEVQVEFLIGILSIVS 105
D Y A + AS+ L GY + VM+G ++FIKEDL+++++QV+F +G+L + +
Sbjct: 59 DSHKRLNMYACASVVAASVIFALYGYVMAVMTGVLLFIKEDLQLSDLQVQFSVGLLHMSA 238
Query: 106 LLGSLGGGRTSDIIGRKWTMALAAVVFQMGGITMTLAPSYQVLMIGRLLAGIGIGFGVMI 165
L + GR +D IGR++T+ L A++F +G + M PSY +LMIG ++GIG+GF +++
Sbjct: 239 LPACMTAGRIADYIGRRYTIILTAIIFLVGSVLMGYGPSYPILMIGLSISGIGLGFSLIV 418
Query: 166 SPIYIAEISPNLTRGSLTTFPEIFINVGIMLGYVSNYAFSGLSVHISWRVMLAVGILPSV 225
+P+Y AEISP RG LT+F E+ N GI LGYVSNY F LS+ + WR+ML V +PS+
Sbjct: 419 APVYCAEISPPSHRGFLTSFLEVSTNAGIALGYVSNYFFGKLSIRLGWRLMLVVHAVPSL 598
Query: 226 FIGFALFIIPESPRWLVMQNRIEEARSVLLKTNEDEKEVEERLAEIQQAAGFANSGKYED 285
+ + ESPRWLVMQ R+ EAR VLL + ++E E+RL EI+ A G +
Sbjct: 599 ALVALMLNWVESPRWLVMQGRVGEARKVLLLVSNTKEEAEQRLKEIKVAVGIDEKCTQDI 778
Query: 286 KPV----------WRELL-SPPPALRRMLITGLGIQCFQQI 315
V +RE+ P P +RR+LI +G+ FQQ+
Sbjct: 779 VQVPNRTRNGGGAFREMFCKPTPPVRRILIAAVGVHAFQQL 901
>AV766904
Length = 611
Score = 218 bits (555), Expect = 2e-57
Identities = 101/185 (54%), Positives = 143/185 (76%)
Frame = +3
Query: 43 QLEDKRNSTRKYVIACAIFASLNNVLLGYDVGVMSGAVIFIKEDLKITEVQVEFLIGILS 102
Q + KRN K+ +ACAI AS+ ++LLGYD+GVMSGAVI+IK DLKI++VQ+E L GI++
Sbjct: 63 QKKPKRN---KFALACAILASMTSILLGYDIGVMSGAVIYIKRDLKISDVQIEILSGIMN 233
Query: 103 IVSLLGSLGGGRTSDIIGRKWTMALAAVVFQMGGITMTLAPSYQVLMIGRLLAGIGIGFG 162
I S +GS GRTSD IGR++T+ LA ++F +G I M +P+Y LM GR +AG+GIGF
Sbjct: 234 IYSPIGSYIAGRTSDWIGRRYTIVLAGLIFFVGAILMGFSPNYAFLMFGRFVAGVGIGFA 413
Query: 163 VMISPIYIAEISPNLTRGSLTTFPEIFINVGIMLGYVSNYAFSGLSVHISWRVMLAVGIL 222
+I+P+Y +EISP L+RG LT+ PE+F+N GI++GY+SNY FS L + + WR+ML +G +
Sbjct: 414 FLIAPVYTSEISPTLSRGFLTSLPEVFLNAGILIGYISNYTFSKLPLRLGWRLMLGIGAI 593
Query: 223 PSVFI 227
PS+F+
Sbjct: 594 PSIFL 608
>CB826772
Length = 490
Score = 149 bits (376), Expect = 1e-36
Identities = 70/146 (47%), Positives = 105/146 (70%)
Frame = +1
Query: 54 YVIACAIFASLNNVLLGYDVGVMSGAVIFIKEDLKITEVQVEFLIGILSIVSLLGSLGGG 113
Y + AS+ + + GY+VGVM+GA++FIKEDL+I+++Q++FL+GI + L S+ G
Sbjct: 52 YACVSVMAASILSAIYGYEVGVMTGALLFIKEDLQISDLQLQFLVGIFHMCGLPASMAAG 231
Query: 114 RTSDIIGRKWTMALAAVVFQMGGITMTLAPSYQVLMIGRLLAGIGIGFGVMISPIYIAEI 173
R SD IGR++T+ LA++ F G I +PSY +LMIG ++GIG GF ++++P+Y AEI
Sbjct: 232 RISDYIGRRYTIILASIAFLSGSILTGYSPSYLILMIGNFISGIGAGFTLIVAPLYCAEI 411
Query: 174 SPNLTRGSLTTFPEIFINVGIMLGYV 199
SP RGSLT+ E IN+GI+LGY+
Sbjct: 412 SPPSHRGSLTSLTEFSINIGILLGYM 489
>CB828147
Length = 570
Score = 136 bits (343), Expect = 7e-33
Identities = 71/190 (37%), Positives = 108/190 (56%), Gaps = 11/190 (5%)
Frame = +1
Query: 187 EIFINVGIMLGYVSNYAFSGLSVHISWRVMLAVGILPSVFIGFALFIIPESPRWLVMQNR 246
E IN+GI+LGY+S + F L +++ WR+MLAV PS+ + F + + ESPRWL+MQ R
Sbjct: 1 EFSINIGILLGYMSTFFFEKLRLNLGWRMMLAVPAAPSIALIFLMLKLGESPRWLIMQGR 180
Query: 247 IEEARSVLLKTNEDEKEVEERLAEIQQAAGFANSGKYEDKPVWRE-----------LLSP 295
+ +A+ VLL ++E E+RLAEI+ A G + E V ++ P
Sbjct: 181 VGDAKKVLLLVFNTKQEAEQRLAEIKTAVGIEPNNTQEIVQVPKKTRHGGGALKELFCKP 360
Query: 296 PPALRRMLITGLGIQCFQQISGIDATVYYSPEILMAAGIEDKSKLLAATVAVGITKTVFI 355
P +RR+++ +G+ F + GI + YSP I GI KSKLL T+ +G+ K VF
Sbjct: 361 TPLVRRIMVAAVGLHVFMHLGGIGVILLYSPRIFEKTGITSKSKLLLCTIGMGVMKLVFS 540
Query: 356 LVAIVLIDKV 365
++I +D V
Sbjct: 541 FISIFFMDGV 570
>TC12858 weakly similar to UP|Q9ZS76 (Q9ZS76) Hexose transporter, partial
(51%)
Length = 882
Score = 130 bits (326), Expect = 7e-31
Identities = 84/282 (29%), Positives = 141/282 (49%)
Frame = +3
Query: 110 LGGGRTSDIIGRKWTMALAAVVFQMGGITMTLAPSYQVLMIGRLLAGIGIGFGVMISPIY 169
LG + I+G + TM + + F G + LA +L++GRLL G GIG PIY
Sbjct: 6 LGASTITRIMGMRATMIVGGLFFVSGALFNGLADGIWMLIVGRLLLGFGIGCANQSVPIY 185
Query: 170 IAEISPNLTRGSLTTFPEIFINVGIMLGYVSNYAFSGLSVHISWRVMLAVGILPSVFIGF 229
++E++P RG L ++ I +GI + + NY F+ + WR+ L +G +P+V
Sbjct: 186 LSEMAPYKYRGGLNMCFQLSITIGIFVANLFNYYFAKILNGQGWRLSLGLGAVPAVIFVV 365
Query: 230 ALFIIPESPRWLVMQNRIEEARSVLLKTNEDEKEVEERLAEIQQAAGFANSGKYEDKPVW 289
+P+SP LV + R E AR L+K ++E L +I A+ + K+ W
Sbjct: 366 GSLCLPDSPSSLVARGRHEAARQELVKI-RGTTDIEAELKDIITASEALENVKHP----W 530
Query: 290 RELLSPPPALRRMLITGLGIQCFQQISGIDATVYYSPEILMAAGIEDKSKLLAATVAVGI 349
+ LL R L+ + I FQQ +G++ +Y+P + G + L++A V +G
Sbjct: 531 KTLLE--RKYRPQLVFAVCIPFFQQFTGLNVITFYAPILFRTIGFGPTASLMSA-VIIGS 701
Query: 350 TKTVFILVAIVLIDKVGRKPLLITSTIGMTACLFCMGVTLSL 391
K V L++I ++DK GR+ L + M C M + +++
Sbjct: 702 FKPVSTLISIFVVDKFGRRTLFLEGGAQMLICQIIMTIAIAV 827
>BI418774
Length = 554
Score = 128 bits (321), Expect = 3e-30
Identities = 72/175 (41%), Positives = 106/175 (60%), Gaps = 5/175 (2%)
Frame = +3
Query: 290 REL-LSPPPALRRMLITGLGIQCFQQISGIDATVYYSPEILMAAGIEDKSKLLAATVAVG 348
REL + P P +RR+LI +G+ FQQI GI+ YSP + GI KS LL ATV +G
Sbjct: 30 RELFVKPSPPVRRILIAAIGVHVFQQICGIEGICIYSPRVFEKTGITSKSNLLLATVGLG 209
Query: 349 ITKTVFILVAIVLIDKVGRKPLLITSTIGMTACL----FCMGVTLSLFEKGPLVIALGIL 404
I++ VF ++ L+D+VGR+ LL+ S+ G+ L FC + E+ I+ I+
Sbjct: 210 ISQAVFTFISAFLLDRVGRRILLLISSGGVVVTLLGLSFCSFIMQQSKEEPLWGISFTIV 389
Query: 405 FVCGNVAFFSVGLGPVCWVLTSEIFPLRVRAQASALGAVANRVCSGLVAMSFLSV 459
+ VAF ++G+GPV WV +SEIFPLR+RAQ + + NR+ + V SF+S+
Sbjct: 390 AIYIFVAFVAIGIGPVTWVYSSEIFPLRLRAQGLGVCVLVNRLANVAVLTSFISI 554
>TC10359 similar to UP|Q94AZ2 (Q94AZ2) AT5g26340/F9D12_17, partial (90%)
Length = 1099
Score = 122 bits (307), Expect = 1e-28
Identities = 82/303 (27%), Positives = 145/303 (47%), Gaps = 21/303 (6%)
Frame = +2
Query: 55 VIACAIFASLNNVLLGYDVGVMSGAVI-------FIKEDLKITEVQVEF----------- 96
VI I A+ ++ GYDVGV G F + K T ++ E
Sbjct: 209 VIISCILAATGGLMFGYDVGVSGGVTSMPHFLHKFFPDVYKKTVLEKELDSNYCKYDNQG 388
Query: 97 ---LIGILSIVSLLGSLGGGRTSDIIGRKWTMALAAVVFQMGGITMTLAPSYQVLMIGRL 153
L + L+ + T+ +GR+ TM +A V F G + A + +L++GR+
Sbjct: 389 LQLFTSSLYLAGLVSTFFASYTTRTLGRRMTMLIAGVFFIAGVVFNVTAQNLAMLIVGRI 568
Query: 154 LAGIGIGFGVMISPIYIAEISPNLTRGSLTTFPEIFINVGIMLGYVSNYAFSGLSVHISW 213
L G G+GF P++++EI+P+ RG+L ++ I +GI+ + NY + + W
Sbjct: 569 LLGCGVGFANQAVPLFLSEIAPSRIRGALNILFQLNITIGILFANLINYGTNKIKGGWGW 748
Query: 214 RVMLAVGILPSVFIGFALFIIPESPRWLVMQNRIEEARSVLLKTNEDEKEVEERLAEIQQ 273
R+ L + +P+V + ++ ++P L+ + R EE ++VL K + VE E+ +
Sbjct: 749 RLSLGLAGIPAVLLTVGALLVVDTPNSLIERGRTEEGKAVLKKIRGTD-NVEPEFLELVE 925
Query: 274 AAGFANSGKYEDKPVWRELLSPPPALRRMLITGLGIQCFQQISGIDATVYYSPEILMAAG 333
A+ A E K +R LL R +I + +Q FQQ +GI+A ++Y+P + G
Sbjct: 926 ASRVAK----EVKDPFRNLLK--RRNRPQIIISIALQIFQQFTGINAIMFYAPVLFNTLG 1087
Query: 334 IED 336
++
Sbjct: 1088FKN 1096
>TC19365 weakly similar to UP|O23213 (O23213) Sugar transporter like
protein, partial (24%)
Length = 441
Score = 117 bits (294), Expect = 4e-27
Identities = 56/119 (47%), Positives = 84/119 (70%)
Frame = +2
Query: 68 LLGYDVGVMSGAVIFIKEDLKITEVQVEFLIGILSIVSLLGSLGGGRTSDIIGRKWTMAL 127
+ GY GVM+GA++FIKE+L I ++QV+ L GIL++ +L + GRTSD +GR++T+ L
Sbjct: 83 IFGYVTGVMAGALLFIKEELGINDMQVQLLGGILNVCALPACMVAGRTSDYVGRRYTIIL 262
Query: 128 AAVVFQMGGITMTLAPSYQVLMIGRLLAGIGIGFGVMISPIYIAEISPNLTRGSLTTFP 186
+AV+ +G I M PS+ +LMIGR AG+G+G ++I+P+Y EIS RG LT+ P
Sbjct: 263 SAVILLLGSILMGYGPSFPILMIGRCTAGLGVGLALIIAPVYSTEISLPSNRGFLTSLP 439
>TC10748 similar to UP|Q7XA50 (Q7XA50) Sorbitol-like transporter, partial
(21%)
Length = 550
Score = 112 bits (279), Expect = 2e-25
Identities = 52/97 (53%), Positives = 71/97 (72%)
Frame = +2
Query: 406 VCGNVAFFSVGLGPVCWVLTSEIFPLRVRAQASALGAVANRVCSGLVAMSFLSVSDAISF 465
V VA FS+G GP+ WV +SEIFPLR+RAQ A+G V NRV SG+++M+FLS+S I+
Sbjct: 5 VLSYVATFSIGAGPITWVYSSEIFPLRLRAQGCAMGVVVNRVTSGVISMTFLSLSKGITI 184
Query: 466 GGTFFLFSAISALAIVFVFTLVPETKGKSLEQIEMMF 502
GG FFLF I+ +F +T++PET+GK+LE +E F
Sbjct: 185 GGAFFLFGGIAICGWIFFYTMLPETRGKTLEDMEGSF 295
>TC12545 similar to UP|Q7XA50 (Q7XA50) Sorbitol-like transporter, partial
(18%)
Length = 482
Score = 107 bits (266), Expect = 6e-24
Identities = 49/87 (56%), Positives = 70/87 (80%)
Frame = +2
Query: 416 GLGPVCWVLTSEIFPLRVRAQASALGAVANRVCSGLVAMSFLSVSDAISFGGTFFLFSAI 475
G GP+ WV +SEIFPLR+RAQ A+GAV NR+ G+++M+FLS+S+AI+ GG FFLF+ I
Sbjct: 2 GSGPITWVYSSEIFPLRLRAQGVAIGAVVNRLTRGVISMTFLSLSNAITIGGAFFLFAGI 181
Query: 476 SALAIVFVFTLVPETKGKSLEQIEMMF 502
+ A +F +TL+PET+G++LE+IE F
Sbjct: 182 AVCAWIFHYTLLPETRGQTLEEIEGSF 262
>TC10135
Length = 1501
Score = 98.2 bits (243), Expect = 3e-21
Identities = 75/245 (30%), Positives = 113/245 (45%), Gaps = 2/245 (0%)
Frame = +2
Query: 180 GSLTTFPEIFINVGIMLGYVSNYAFSGLSVHISWRVMLAVGILPSVFIGFALFIIPESPR 239
G+L + I G L Y+ N AF+ +WR ML V P++ + +PESPR
Sbjct: 2 GALVSLNSFLITGGQFLSYLINLAFTNAPG--TWRWMLGVAAAPAIIQIVLMLSLPESPR 175
Query: 240 WLVMQNRIEEARSVLLKTNEDEKEVEERLAEIQQAAGFANSGKYEDKPVWRELLSPPPAL 299
WL + R EE++S+L K E +V+ + ++++ K LL +
Sbjct: 176 WLYRKGREEESKSILKKIYAPE-DVDAEIEALKESVESEIEESKTSKISMMTLLKTT-TV 349
Query: 300 RRMLITGLGIQCFQQISGIDATVYYSPEILMAAGI-EDKSKLLAATVAVGITKTVFILVA 358
RR L G+G+Q FQQ GI+ +YYSP I+ AG +++ LL + + G+ IL +
Sbjct: 350 RRGLYAGMGLQFFQQFVGINTVMYYSPTIVQLAGFASNRTALLLSLITSGLNAFGSIL-S 526
Query: 359 IVLIDKVGRKPLLITSTIGMTACLFCMGVTLSLFE-KGPLVIALGILFVCGNVAFFSVGL 417
I IDK GRK L + S G+ L + V E P V A+ F +
Sbjct: 527 IYFIDKTGRKKLALISLCGVVLSLALLTVAFRESELHAPTVSAIETSHYNNTCPDFRAAV 706
Query: 418 GPVCW 422
P W
Sbjct: 707 NPGRW 721
Score = 76.3 bits (186), Expect = 1e-14
Identities = 36/91 (39%), Positives = 54/91 (58%)
Frame = +2
Query: 413 FSVGLGPVCWVLTSEIFPLRVRAQASALGAVANRVCSGLVAMSFLSVSDAISFGGTFFLF 472
FS G+G V WV+ SEI+P R R + + + + +V+ SFLS++ I TF +F
Sbjct: 926 FSPGMGTVPWVINSEIYPFRYRGVCGGIASTTVWISNLIVSQSFLSLTQTIGTAWTFMMF 1105
Query: 473 SAISALAIVFVFTLVPETKGKSLEQIEMMFE 503
++ +AI FV VPETKG +E++E M E
Sbjct: 1106 GILAVVAIFFVIVFVPETKGVPMEEVEKMLE 1198
>BI420004
Length = 547
Score = 92.0 bits (227), Expect = 2e-19
Identities = 45/126 (35%), Positives = 76/126 (59%), Gaps = 3/126 (2%)
Frame = +1
Query: 54 YVIACAIFASLNNVLLGYDVGVMSGAVIFIKED---LKITEVQVEFLIGILSIVSLLGSL 110
Y++ A + +L GYD GV+SGA+++IK+D ++ + + E ++ + + +++G+
Sbjct: 166 YILGVTAAAGIGGLLFGYDTGVISGALLYIKDDFEEVRRSSLLQETIVSMALVGAIIGAA 345
Query: 111 GGGRTSDIIGRKWTMALAAVVFQMGGITMTLAPSYQVLMIGRLLAGIGIGFGVMISPIYI 170
GG +D GRK A VVF +G + M AP ++ GRLL G+GIG + +P+YI
Sbjct: 346 TGGWINDAFGRKKATLSADVVFTLGSLVMAAAPDAYFVIFGRLLVGLGIGVASVTAPVYI 525
Query: 171 AEISPN 176
AE SP+
Sbjct: 526 AESSPS 543
>TC16378 similar to GB|AAM70554.1|21700861|AY124845 At1g75220/F22H5_6
{Arabidopsis thaliana;}, partial (31%)
Length = 738
Score = 89.4 bits (220), Expect = 1e-18
Identities = 55/149 (36%), Positives = 85/149 (56%), Gaps = 7/149 (4%)
Frame = +2
Query: 361 LIDKVGRKPLLITSTIGMTACLFCMGVTLSL----FEKGPLVIALGILFVCGNVAF---F 413
L+DK GR+ LL+ S+ MT L + + L E L LGI+ V G V F
Sbjct: 11 LVDKSGRRLLLLLSSSIMTVSLVVVSIAFYLEGTVSEDSHLYKILGIVSVVGLVVMVIGF 190
Query: 414 SVGLGPVCWVLTSEIFPLRVRAQASALGAVANRVCSGLVAMSFLSVSDAISFGGTFFLFS 473
S+GLGP+ WV+ SEI P+ ++ A + +AN + S + M+ ++ S GGTF +++
Sbjct: 191 SLGLGPIPWVIMSEILPVSIKGLAGSTATMANWLTSWAITMT-ANLLLTWSSGGTFTMYT 367
Query: 474 AISALAIVFVFTLVPETKGKSLEQIEMMF 502
++A +VF VPETKG++LE+I+ F
Sbjct: 368 VVAAFTVVFTALWVPETKGRTLEEIQSSF 454
>BP074036
Length = 405
Score = 88.6 bits (218), Expect = 2e-18
Identities = 42/91 (46%), Positives = 62/91 (67%)
Frame = -2
Query: 412 FFSVGLGPVCWVLTSEIFPLRVRAQASALGAVANRVCSGLVAMSFLSVSDAISFGGTFFL 471
F S+G+GPV W+ +SEIFP+ +RAQ A+ NR+ + + SF+S+ AI+ GG F
Sbjct: 404 FMSIGIGPVTWIYSSEIFPITLRAQGLAVCVAVNRIVNMAMLTSFISIYKAITMGGCLFA 225
Query: 472 FSAISALAIVFVFTLVPETKGKSLEQIEMMF 502
+ ++ LA F FTL PETKG+SLE +E++F
Sbjct: 224 LAGVNVLAFWFYFTL-PETKGRSLEDMEIVF 135
>BP058370
Length = 358
Score = 88.6 bits (218), Expect = 2e-18
Identities = 40/89 (44%), Positives = 64/89 (70%)
Frame = +3
Query: 67 VLLGYDVGVMSGAVIFIKEDLKITEVQVEFLIGILSIVSLLGSLGGGRTSDIIGRKWTMA 126
+ + +VGVM+GA++FIKEDL+I+++Q++FL+GI + L S+ GR SD IGR++T+
Sbjct: 90 ITVSLEVGVMTGALLFIKEDLQISDLQLQFLVGIFHMCGLPASMAAGRISDYIGRRYTII 269
Query: 127 LAAVVFQMGGITMTLAPSYQVLMIGRLLA 155
LA++ F G I +PSY +LMIG ++
Sbjct: 270 LASIAFLSGSILTGYSPSYLILMIGNFIS 356
>TC12303 similar to GB|CAB10424.1|2245004|ATFCA6 membrane transporter like
protein {Arabidopsis thaliana;}, partial (25%)
Length = 545
Score = 84.7 bits (208), Expect = 3e-17
Identities = 42/121 (34%), Positives = 71/121 (57%), Gaps = 3/121 (2%)
Frame = +3
Query: 54 YVIACAIFASLNNVLLGYDVGVMSGAVIFIKEDLKITEVQVEFLIGILSIV---SLLGSL 110
YV+ A A + +L GYD GV+SGA+++IK+D K + + I+S +++G+
Sbjct: 183 YVLRRAFSAGIGGLLFGYDTGVISGALLYIKDDFKAVDRKTWLQEAIVSTAIAGAIIGAA 362
Query: 111 GGGRTSDIIGRKWTMALAAVVFQMGGITMTLAPSYQVLMIGRLLAGIGIGFGVMISPIYI 170
GG +D GR+ + +A +F +G + M AP+ +L+ GR+ G G+G M SP+YI
Sbjct: 363 VGGWINDRFGRRVAIIIADTLFLIGSVIMAAAPNPAILLFGRVFVGFGVGMASMASPLYI 542
Query: 171 A 171
+
Sbjct: 543 S 545
>CB829587
Length = 548
Score = 80.9 bits (198), Expect = 5e-16
Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 3/142 (2%)
Frame = +2
Query: 301 RMLITGLGIQCFQQISGIDATVYYSPEILMAAGIEDKSKLLAATVAVGITKTVFILVAIV 360
R ++ G+G+ QQ GI+ +Y+ E +AAG+ A T+A + F ++ +
Sbjct: 131 RSVVIGVGLMVCQQSVGINGIGFYTAETFVAAGVSSGK---AGTIAYACIQVPFTILGAI 301
Query: 361 LIDKVGRKPLLITSTIGMTACLFCMGVTLSLFEKGPL---VIALGILFVCGNVAFFSVGL 417
L+DK GR+PL+ S+ G F G+ L ++G L V L I V +A +S+GL
Sbjct: 302 LMDKSGRRPLITVSSGGTFLGCFITGIAFFLKDQGLLLEWVPTLAIGGVLIYIAAYSIGL 481
Query: 418 GPVCWVLTSEIFPLRVRAQASA 439
G V WV+ SE+FP+ ++ A +
Sbjct: 482 GSVPWVIMSEVFPIHIKGTAGS 547
>TC19595
Length = 500
Score = 78.6 bits (192), Expect = 2e-15
Identities = 36/96 (37%), Positives = 60/96 (62%)
Frame = +1
Query: 419 PVCWVLTSEIFPLRVRAQASALGAVANRVCSGLVAMSFLSVSDAISFGGTFFLFSAISAL 478
PV W + SEI+P R + A N VCS +++ SFLS+SDA+ GG+F + I+ +
Sbjct: 1 PVPWTVNSEIYPEEFRGVCGGMSATVNWVCSVIMSQSFLSISDAVGLGGSFAILGVIAVV 180
Query: 479 AIVFVFTLVPETKGKSLEQIEMMFENEHGSQGKEME 514
A +FV VPETKG + E++ ++++ ++GK+ +
Sbjct: 181 AFLFVLLFVPETKGLTFEEMTLIWKRR--ARGKDYD 282
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.323 0.140 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,108,878
Number of Sequences: 28460
Number of extensions: 105827
Number of successful extensions: 636
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of query: 530
length of database: 4,897,600
effective HSP length: 95
effective length of query: 435
effective length of database: 2,193,900
effective search space: 954346500
effective search space used: 954346500
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)
Medicago: description of AC126008.6