TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC125478.7 - phase: 0 
         (357 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC14821 homologue to UP|AAR12195 (AAR12195) Molecular chaperone ...    29  1.1
TC11995                                                                27  4.0
AV421981                                                               27  5.3
TC8429 weakly similar to UP|BAD03306 (BAD03306) MAP3K-like prote...    27  6.9

>TC14821 homologue to UP|AAR12195 (AAR12195) Molecular chaperone Hsp90-1,
           partial (29%)
          Length = 612

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 333 HPQILPPIPGDLPRPANEE 351
           HPQ+ PP P  LPRP +++
Sbjct: 123 HPQLCPPRPSSLPRPHHQK 67


>TC11995 
          Length = 726

 Score = 27.3 bits (59), Expect = 4.0
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +1

Query: 70  RDFYTSYLGRANVLAGTEDPEEVEELERVRTYCVRCY 106
           R F T+YLGR  V+  T + ++ EE+   + + +R +
Sbjct: 298 RSFQTNYLGRLTVIHNTLEGKKKEEILFCQVFVLRVF 408


>AV421981 
          Length = 468

 Score = 26.9 bits (58), Expect = 5.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 278 PRHPTDVRDLPPPSIVQMFVD 298
           P HPT +R LPPP+I    V+
Sbjct: 129 PLHPTLLRHLPPPTISTSLVE 191


>TC8429 weakly similar to UP|BAD03306 (BAD03306) MAP3K-like protein kinase,
           partial (55%)
          Length = 1298

 Score = 26.6 bits (57), Expect = 6.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 226 DDVCWRSYEEHREI 239
           DD+CW  YEEH ++
Sbjct: 566 DDLCWVCYEEHSDL 525


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.323    0.140    0.447 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,094,527
Number of Sequences: 28460
Number of extensions: 104803
Number of successful extensions: 484
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of query: 357
length of database: 4,897,600
effective HSP length: 91
effective length of query: 266
effective length of database: 2,307,740
effective search space: 613858840
effective search space used: 613858840
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)