BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC125478.13 - phase: 0
(436 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC14935 similar to UP|Q9LSN8 (Q9LSN8) Protein phosphatase 2C-lik... 210 3e-55
TC14934 similar to UP|Q9LSN8 (Q9LSN8) Protein phosphatase 2C-lik... 206 8e-54
TC9837 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (PP2... 147 3e-36
AV768666 112 2e-25
TC20114 similar to UP|Q9LZ09 (Q9LZ09) Protein phosphatase-like p... 110 6e-25
TC19937 weakly similar to GB|AAL87371.1|19548015|AY081718 AT4g33... 94 4e-20
TC17251 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (PP... 91 5e-19
BP034242 88 2e-18
TC14449 similar to UP|O24078 (O24078) Protein phosphatase 2C, pa... 80 3e-18
TC16112 similar to GB|AAL87371.1|19548015|AY081718 AT4g33920/F17... 84 5e-17
TC15379 UP|Q9ZPL8 (Q9ZPL8) Protein phosphatase type 2C, complete 84 5e-17
TC14994 similar to UP|O82469 (O82469) Protein phosphatase-2C , p... 83 8e-17
TC17500 UP|Q9ZPL9 (Q9ZPL9) Nodule-enhanced protein phosphatase t... 81 4e-16
BP048498 49 5e-14
TC15266 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (PP... 73 8e-14
TC13758 similar to GB|AAL87371.1|19548015|AY081718 AT4g33920/F17... 71 4e-13
TC12583 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (PP... 70 5e-13
TC8735 69 2e-12
TC11286 homologue to GB|AAO63448.1|28951049|BT005384 At4g03415 {... 64 4e-11
AV415023 64 6e-11
>TC14935 similar to UP|Q9LSN8 (Q9LSN8) Protein phosphatase 2C-like protein,
partial (56%)
Length = 1089
Score = 210 bits (535), Expect = 3e-55
Identities = 120/262 (45%), Positives = 163/262 (61%), Gaps = 4/262 (1%)
Frame = +1
Query: 109 TLRDAVSATEAGFLEYVEKNYRQKNNLGKVGSCCLAGIIWKKTLHVANLGDSRAVIGTMV 168
T+ A TE G+ V ++ + + GSCCL G+I+++TL VAN GDSR V+G V
Sbjct: 4 TIERAFLQTEEGYTALVSNSWNSRPQIANAGSCCLVGVIFQQTLFVANAGDSRVVLGKKV 183
Query: 169 NNK--IQAEQLTRDHNCKDEAIRKELMSEHPDDTTIVMYEREVWRVKGIITVSRSIGDTY 226
N + A QL+ +HN EAIR+EL HP+D IV+ + VW+VKGII VSRSIGD Y
Sbjct: 184 GNTDGVAAIQLSTEHNANLEAIREELRELHPNDPQIVVLKYGVWKVKGIIQVSRSIGDVY 363
Query: 227 LKRPEFSLDESFPKFEEVPEPFIRGVLSAEPEMRSRDLTENDKFLIFASDGLWDFLSNEQ 286
+K F+ + KF +PEP +++A P + S L ND FLIFASDGLW+ LSNE+
Sbjct: 364 MKDARFNREPLAAKFR-LPEPMNMPIMTANPTILSHSLQPNDLFLIFASDGLWEHLSNEK 540
Query: 287 AVEIVQNNSRNGIAKRLVSTVLAQAAANRNSTYNTMKNANLGRGDGNRRYFHDDISVIVV 346
AV+IV +N R G AK LV L +AA+ R Y+ ++ + RR+FHDDISVIV+
Sbjct: 541 AVDIVNSNPRAGSAKILVKAALHEAASKREMRYSDLRKID----KKVRRHFHDDISVIVL 708
Query: 347 FLDKKSILRMPLHN--LSYKSS 366
FL+ I R + N LSY+S+
Sbjct: 709 FLNHDLISRGTVLNPPLSYRSA 774
>TC14934 similar to UP|Q9LSN8 (Q9LSN8) Protein phosphatase 2C-like protein,
partial (57%)
Length = 932
Score = 206 bits (523), Expect = 8e-54
Identities = 114/227 (50%), Positives = 150/227 (65%), Gaps = 7/227 (3%)
Frame = +1
Query: 139 GSCCLAGIIWKKTLHVANLGDSRAVIGTMVNNK--IQAEQLTRDHNCKDEAIRKELMSEH 196
G+CCL G+I+++TL VANLGDSR V+G V N + A QL+ +HN E IR+EL H
Sbjct: 10 GTCCLVGVIFQQTLFVANLGDSRCVLGKKVGNTGGVAAIQLSTEHNANLEDIRQELKELH 189
Query: 197 PDDTTIVMYEREVWRVKGIITVSRSIGDTYLKRPEFSLDESFPKFEEVPEPFIRGVLSAE 256
PDD IV+ + VWRVKGII VSRSIGD+Y+K +F+ + PKF +PEP ++SA
Sbjct: 190 PDDPQIVVLKHGVWRVKGIIQVSRSIGDSYMKHAQFNREPINPKFR-LPEPMNMPIMSAN 366
Query: 257 PEMRSRDLTENDKFLIFASDGLWDFLSNEQAVEIVQNNSRNGIAKRLVSTVLAQAAANRN 316
P + S L +D FLIFASDGLW+ LSNEQAV+IV +N R G AKRLV L +AA R
Sbjct: 367 PTILSHPLQPSDSFLIFASDGLWEHLSNEQAVDIVHSNPRAGSAKRLVKAALQEAARKRE 546
Query: 317 STYNTMKNANLGRGDGNRRYFHDDISVIVVFLD-----KKSILRMPL 358
Y+ ++ + RR+FHDDI+VIV+FL+ + S+L PL
Sbjct: 547 MRYSDLRKID----KKVRRHFHDDITVIVLFLNHDLISRGSVLNPPL 675
>TC9837 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (PP2C) ,
partial (43%)
Length = 727
Score = 147 bits (371), Expect = 3e-36
Identities = 76/147 (51%), Positives = 104/147 (70%)
Frame = +3
Query: 209 VWRVKGIITVSRSIGDTYLKRPEFSLDESFPKFEEVPEPFIRGVLSAEPEMRSRDLTEND 268
VWRVKGII +SRSIGD YLK+ EF+ + + KF + EPF R +LS+EP + L +D
Sbjct: 9 VWRVKGIIQISRSIGDVYLKKAEFNREPLYAKFR-LREPFKRPILSSEPSITVHQLQPHD 185
Query: 269 KFLIFASDGLWDFLSNEQAVEIVQNNSRNGIAKRLVSTVLAQAAANRNSTYNTMKNANLG 328
+F+IFASDGLW+ LSN++AV+IVQN+ R+G A+RLV T L +AA R Y+ ++ +
Sbjct: 186 QFIIFASDGLWEHLSNQEAVDIVQNSPRSGSARRLVKTALQEAAKKREMRYSDLRRID-- 359
Query: 329 RGDGNRRYFHDDISVIVVFLDKKSILR 355
G RR+FHDDI+VIVV+LD + R
Sbjct: 360 --RGVRRHFHDDITVIVVYLDSNLMSR 434
>AV768666
Length = 463
Score = 112 bits (279), Expect = 2e-25
Identities = 61/141 (43%), Positives = 81/141 (57%), Gaps = 7/141 (4%)
Frame = +1
Query: 35 DLKRHCYGQFSSAFVQANEAMEDHSQVEVASRKA-------LFLGVYDGHAGFEASVFIT 87
D +H G+FS A VQAN +ED S +E S F+GVYDGH G E S +I
Sbjct: 28 DSGKHLNGEFSMAVVQANNLLEDQSYLESGSLSTSDSGPYGTFVGVYDGHGGPETSRYIN 207
Query: 88 QHLFDHLLRAVRANENKITEPTLRDAVSATEAGFLEYVEKNYRQKNNLGKVGSCCLAGII 147
+HL HL + + ++ +R A+ ATE GF+ V K + K + VGSCCL G+I
Sbjct: 208 EHLVRHLKK-----QQSMSVDVIRKAIQATEDGFMSLVAKQWSMKPQIAAVGSCCLIGVI 372
Query: 148 WKKTLHVANLGDSRAVIGTMV 168
TL++ANLGDSRAV+G V
Sbjct: 373 CNGTLYIANLGDSRAVLGRAV 435
>TC20114 similar to UP|Q9LZ09 (Q9LZ09) Protein phosphatase-like protein,
partial (33%)
Length = 587
Score = 110 bits (274), Expect = 6e-25
Identities = 58/115 (50%), Positives = 76/115 (65%)
Frame = +1
Query: 239 PKFEEVPEPFIRGVLSAEPEMRSRDLTENDKFLIFASDGLWDFLSNEQAVEIVQNNSRNG 298
P+ +PE F + +LS EP + + L ND+FLIFASDGLW+ LSN++AV IV NN RNG
Sbjct: 4 PQKFRLPETFFKPILSWEPSITTHKLHSNDQFLIFASDGLWEQLSNQEAVNIVSNNPRNG 183
Query: 299 IAKRLVSTVLAQAAANRNSTYNTMKNANLGRGDGNRRYFHDDISVIVVFLDKKSI 353
IA+RLV L +AA R + ++ G RR+FHDDI+VIVVFL+ K I
Sbjct: 184 IARRLVKAALREAAKKREMRVSDLQKIE----QGVRRHFHDDITVIVVFLNPKLI 336
>TC19937 weakly similar to GB|AAL87371.1|19548015|AY081718
AT4g33920/F17I5_110 {Arabidopsis thaliana;}, partial
(30%)
Length = 593
Score = 94.0 bits (232), Expect = 4e-20
Identities = 55/127 (43%), Positives = 76/127 (59%)
Frame = +2
Query: 34 IDLKRHCYGQFSSAFVQANEAMEDHSQVEVASRKALFLGVYDGHAGFEASVFITQHLFDH 93
+D K H Y S A QAN ++ED QV ++ + F+GVYDGH G EAS FI +LF
Sbjct: 227 MDSKPHHY---SIAVAQANSSLEDQGQVYISPSET-FVGVYDGHGGPEASRFIRNNLFS- 391
Query: 94 LLRAVRANENKITEPTLRDAVSATEAGFLEYVEKNYRQKNNLGKVGSCCLAGIIWKKTLH 153
L + E ++E ++ A SATE FL V++++ ++ + VGSCCL I K L+
Sbjct: 392 FLHKFASEEGGLSEQVIKKAFSATEEEFLHLVKQSWTKRPQIASVGSCCLLXAISKGVLY 571
Query: 154 VANLGDS 160
VANLGDS
Sbjct: 572 VANLGDS 592
>TC17251 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (PP2C) ,
partial (30%)
Length = 715
Score = 90.5 bits (223), Expect = 5e-19
Identities = 50/116 (43%), Positives = 72/116 (61%)
Frame = +3
Query: 267 NDKFLIFASDGLWDFLSNEQAVEIVQNNSRNGIAKRLVSTVLAQAAANRNSTYNTMKNAN 326
+D+F+IFASDGLW+ +N+ AV+IVQN+ +GIAKRLV L +AA R Y+ + +
Sbjct: 3 HDQFIIFASDGLWEHFTNQDAVDIVQNHPHHGIAKRLVKMALQEAAKKREMRYSDLNKID 182
Query: 327 LGRGDGNRRYFHDDISVIVVFLDKKSILRMPLHNLSYKSSSARPTTSAFAESGLTM 382
G RR+FHDDI+VIVVFLD NL ++SS + T + +G+ +
Sbjct: 183 ----RGVRRHFHDDITVIVVFLDS---------NLVSRASSGKFTNISVRGAGINL 311
>BP034242
Length = 539
Score = 88.2 bits (217), Expect = 2e-18
Identities = 47/93 (50%), Positives = 57/93 (60%)
Frame = -1
Query: 257 PEMRSRDLTENDKFLIFASDGLWDFLSNEQAVEIVQNNSRNGIAKRLVSTVLAQAAANRN 316
P + R L D FLIFASDGLWD L++E AVEI+ + R GIAKRLV L +AA
Sbjct: 539 PSILKRKLKVEDLFLIFASDGLWDHLTDEAAVEIISRSPRTGIAKRLVRAALEEAAKKNG 360
Query: 317 STYNTMKNANLGRGDGNRRYFHDDISVIVVFLD 349
Y +K G RR FHDDI+VIV++LD
Sbjct: 359 KRYEDLKRIE----KGVRRLFHDDITVIVLYLD 273
>TC14449 similar to UP|O24078 (O24078) Protein phosphatase 2C, partial (63%)
Length = 1000
Score = 80.5 bits (197), Expect(2) = 3e-18
Identities = 72/228 (31%), Positives = 109/228 (47%), Gaps = 12/228 (5%)
Frame = +3
Query: 102 ENKITEPTLRDAVSATEA---GFLEYVEKNYRQKNNLGKVGSCCLAGIIWKKTLHVANLG 158
+N + E RD EA G+L + ++ +++ G GSCC+ +I L V+N G
Sbjct: 114 KNVLDEVIKRDDADVEEAVKRGYLN-TDSDFLKEDLHG--GSCCVTALIRNGNLVVSNAG 284
Query: 159 DSRAVIGTMVNNKIQAEQLTRDH--NCKDEAIRKELMSEHPDDTTIVMYEREVWRVKGII 216
D RAVI + AE LT DH + +DE R E + + D R VWR++G +
Sbjct: 285 DCRAVI----SRGGVAEALTTDHRPSREDERERIETLGGYVDLC------RGVWRIQGSL 434
Query: 217 TVSRSIGDTYLKRPEFSLDESFPKFEEVPEPFIRGVLSAEPEMRSRDLTENDKFLIFASD 276
VSRSIGD +LK+ ++AEPE + + LI ASD
Sbjct: 435 AVSRSIGDRHLKQ----------------------WVTAEPETKVIKIEPEHDLLILASD 548
Query: 277 GLWDFLSNEQAVEI-----VQNNSRNGI--AKRLVSTVLAQAAANRNS 317
GLWD +SN++AV++ V NN + K+LV ++ + + S
Sbjct: 549 GLWDKVSNQEAVDLARPLCVGNNKPQSLLACKKLVDLACSRGSMDDTS 692
Score = 27.7 bits (60), Expect(2) = 3e-18
Identities = 11/24 (45%), Positives = 15/24 (61%)
Frame = +2
Query: 67 KALFLGVYDGHAGFEASVFITQHL 90
K F GV+DGH G +A+ F +L
Sbjct: 41 KLAFFGVFDGHGGAKAAEFAANNL 112
>TC16112 similar to GB|AAL87371.1|19548015|AY081718 AT4g33920/F17I5_110
{Arabidopsis thaliana;}, partial (21%)
Length = 612
Score = 84.0 bits (206), Expect = 5e-17
Identities = 46/82 (56%), Positives = 55/82 (66%)
Frame = +3
Query: 268 DKFLIFASDGLWDFLSNEQAVEIVQNNSRNGIAKRLVSTVLAQAAANRNSTYNTMKNANL 327
D FLIFASDGLWD LS+E AVE+V R GIAKRLV L +AA R YN + +
Sbjct: 3 DLFLIFASDGLWDQLSDEAAVEMVFKYPRAGIAKRLVRAALQEAAKKREMRYNDIMKID- 179
Query: 328 GRGDGNRRYFHDDISVIVVFLD 349
G RR+FHDDI+VIV++LD
Sbjct: 180 ---KGIRRHFHDDITVIVIYLD 236
>TC15379 UP|Q9ZPL8 (Q9ZPL8) Protein phosphatase type 2C, complete
Length = 1338
Score = 84.0 bits (206), Expect = 5e-17
Identities = 77/276 (27%), Positives = 128/276 (45%), Gaps = 7/276 (2%)
Frame = +1
Query: 50 QANEAMEDH--SQVEVASRKALFL-GVYDGHAGFEASVFITQHLFDHLLRAVRANENKIT 106
+++ AMED+ +Q + L L ++DGH+G ++ +LFD++L+ + T
Sbjct: 349 RSDHAMEDYVVAQFKTVDNNELGLFAIFDGHSGHNVPDYLQSNLFDNILK----EPDFWT 516
Query: 107 EPTLRDAVSATEAGFLEYVEKNYRQKNNLGKVGSCCLAGIIWK-KTLHVANLGDSRAVI- 164
+P V A + +++ + LG+ GS + I+ + L VANLGDSRAV+
Sbjct: 517 KP-----VEAVKKAYVDTDSTILEKSGELGRGGSTAVTAILINCQKLVVANLGDSRAVLC 681
Query: 165 --GTMVNNKIQAEQLTRDHNCKDEAIRKELMSEHPDDTTIVMYEREVWRVKGIITVSRSI 222
G + + E T + ++ R +S P D V RV G + VSR+
Sbjct: 682 KNGEAIPLSVDHEPATESEDIRN---RGGFVSNFPGD---------VPRVDGQLAVSRAF 825
Query: 223 GDTYLKRPEFSLDESFPKFEEVPEPFIRGVLSAEPEMRSRDLTENDKFLIFASDGLWDFL 282
GD LK+ LS+EP + + ++ +F+I ASDGLW +
Sbjct: 826 GDKSLKKH----------------------LSSEPHVTVELIDDDAEFIILASDGLWKVM 939
Query: 283 SNEQAVEIVQNNSRNGIAKRLVSTVLAQAAANRNST 318
SN++AV+ + RN R + L + A RNS+
Sbjct: 940 SNQEAVDAI----RNVKDARSAAKNLTEEALKRNSS 1035
>TC14994 similar to UP|O82469 (O82469) Protein phosphatase-2C , partial
(89%)
Length = 1672
Score = 83.2 bits (204), Expect = 8e-17
Identities = 69/241 (28%), Positives = 109/241 (44%), Gaps = 14/241 (5%)
Frame = +3
Query: 70 FLGVYDGHAGFEASVFITQHLFDHLLRAVRANENKITEPTLRDAVSATEAGFLEYVEKNY 129
F GV+DGH G EA+ +I +++ V + S + FL+ VE +
Sbjct: 612 FYGVFDGHGGPEAAAYIRKNVIKFFFEDVSFPQT-----------SEVDKVFLQEVENSL 758
Query: 130 RQKNNLG------------KVGSCCLAGIIWKKTLHVANLGDSRAVIGTMVNNKIQAEQL 177
R+ L G+ L I+ + L VAN GD RAV+ + K +A +
Sbjct: 759 RKAFLLADSALADDCSVNTSSGTTALTAFIFGRLLMVANAGDCRAVL----SRKGEAIDM 926
Query: 178 TRDHN--CKDEAIRKELMSEHPDDTTIVMYEREVWRVKGIITVSRSIGDTYLKRPEFSLD 235
+ DH E R E + + +D + G+++V+R++GD +K P+ +
Sbjct: 927 SEDHRPIYPSERRRVEDLGGYIEDGYL----------NGVLSVTRALGDWDMKLPKGA-- 1070
Query: 236 ESFPKFEEVPEPFIRGVLSAEPEMRSRDLTENDKFLIFASDGLWDFLSNEQAVEIVQNNS 295
P P I AEPE R LTE+D+FLI DG+WD +S++ AV +V+
Sbjct: 1071---------PSPLI-----AEPEFRQMVLTEDDEFLIIGCDGIWDVMSSQHAVSLVRKGL 1208
Query: 296 R 296
R
Sbjct: 1209R 1211
>TC17500 UP|Q9ZPL9 (Q9ZPL9) Nodule-enhanced protein phosphatase type 2C,
complete
Length = 1325
Score = 80.9 bits (198), Expect = 4e-16
Identities = 76/288 (26%), Positives = 124/288 (42%), Gaps = 11/288 (3%)
Frame = +3
Query: 45 SSAFVQANEAMEDHSQVEVAS-RKALFLGVYDGHAGFEASVFITQHLFDHLLRAVRANEN 103
S + V + + MED VE K + V+DGH G + + + L+ + V N
Sbjct: 402 SVSVVGSRKEMEDAVSVETGCVTKCDYFAVFDGHGGAQVAEACRERLYRLVAEEVERCGN 581
Query: 104 KITEPTLRDAVSATEAGFLEYVEKNYRQKNNLGKVGSCCLAGIIWKKTLHVANLGDSRAV 163
+ E + + G ++ L VGS + ++ + +AN GD RAV
Sbjct: 582 GVEEVDWEEVME----GCFRNMDGEVAGNAALRTVGSTAVVAVVAAAEVVIANCGDCRAV 749
Query: 164 IGTMVNNKIQAEQLTRDHNCKDEAIRKELMSEHPDDTTIVMYEREVWRVKGIITVSRSIG 223
+G +A L+ DH ELM ++ + + RV G++ SRSIG
Sbjct: 750 LG----RGGEAVDLSSDHKPDRP---DELMRIEEAGGKVINWNGQ--RVLGVLATSRSIG 902
Query: 224 DTYLKRPEFSLDESFPKFEEVPEPFIRGVLSAEPEMRSRDLTENDKFLIFASDGLWDFLS 283
D YL+ P++ ++PE+ + D+FLI ASDGLWD +S
Sbjct: 903 DQYLR------------------PYV----ISKPEVTVTKRSSKDEFLILASDGLWDVIS 1016
Query: 284 NEQAVEIVQNNSRNGIAKRL----------VSTVLAQAAANRNSTYNT 321
+E A ++V+ NG +R+ +T+LA+ A + S NT
Sbjct: 1017SEMACQVVR-KCLNGQIRRICNENQSRASEAATLLAEIALAKGSRDNT 1157
>BP048498
Length = 470
Score = 48.9 bits (115), Expect(2) = 5e-14
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = -1
Query: 267 NDKFLIFASDGLWDFLSNEQAVEIVQNNSR 296
ND FLIFASDGLW+ LSNE+AV+IV +N R
Sbjct: 467 NDLFLIFASDGLWEHLSNEKAVDIVNSNPR 378
Score = 45.1 bits (105), Expect(2) = 5e-14
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = -2
Query: 298 GIAKRLVSTVLAQAAANRNSTYNTMKNANLGRGDGNRRYFHDDISVIVVFLDKKSILRMP 357
G AK LV L +AA R Y+ ++ + RR+FHDDISVIV+FL+ I R
Sbjct: 301 GSAKILVKAALHEAARKREMRYSDLRKID----QKVRRHFHDDISVIVLFLNHDLISRGT 134
Query: 358 LHN--LSYKSS 366
+ N LSY+S+
Sbjct: 133 VLNPPLSYRSA 101
>TC15266 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (PP2C) ,
partial (25%)
Length = 725
Score = 73.2 bits (178), Expect = 8e-14
Identities = 36/77 (46%), Positives = 51/77 (65%)
Frame = +1
Query: 279 WDFLSNEQAVEIVQNNSRNGIAKRLVSTVLAQAAANRNSTYNTMKNANLGRGDGNRRYFH 338
W+ LSN+ AV+IVQN+ +G A+RL+ T L +AA R Y+ +K + G RR+FH
Sbjct: 1 WEHLSNQDAVDIVQNHPHHGSARRLIKTALQEAAKKREMRYSDLKKID----RGVRRHFH 168
Query: 339 DDISVIVVFLDKKSILR 355
DDI+V+VVFLD + R
Sbjct: 169 DDITVVVVFLDSNLVSR 219
>TC13758 similar to GB|AAL87371.1|19548015|AY081718 AT4g33920/F17I5_110
{Arabidopsis thaliana;}, partial (28%)
Length = 466
Score = 70.9 bits (172), Expect = 4e-13
Identities = 40/92 (43%), Positives = 53/92 (57%)
Frame = +2
Query: 35 DLKRHCYGQFSSAFVQANEAMEDHSQVEVASRKALFLGVYDGHAGFEASVFITQHLFDHL 94
DLK H G FS A QAN ++ED SQV S A ++GVYDGH G +AS F+ HLF +
Sbjct: 185 DLKPHASGDFSIAVAQANSSLEDQSQV-FTSPSATYVGVYDGHGGPQASRFVNNHLFPY- 358
Query: 95 LRAVRANENKITEPTLRDAVSATEAGFLEYVE 126
L + ++ ++ A SATE FL V+
Sbjct: 359 LHKFATEQGGLSVDVIKKAFSATEEEFLHLVK 454
>TC12583 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (PP2C) ,
partial (23%)
Length = 277
Score = 70.5 bits (171), Expect = 5e-13
Identities = 37/80 (46%), Positives = 48/80 (59%)
Frame = +2
Query: 89 HLFDHLLRAVRANENKITEPTLRDAVSATEAGFLEYVEKNYRQKNNLGKVGSCCLAGIIW 148
HLF HL R +++ E +R A ATE GFL V K + + VGSCCL G+I
Sbjct: 5 HLFQHLKRFASEHKSMSVE-VIRKAYQATEEGFLSVVTKLWPMNAQIASVGSCCLVGVIC 181
Query: 149 KKTLHVANLGDSRAVIGTMV 168
L++ANLGDSRAV+G +V
Sbjct: 182 GGVLYIANLGDSRAVLGRVV 241
>TC8735
Length = 595
Score = 68.6 bits (166), Expect = 2e-12
Identities = 46/145 (31%), Positives = 76/145 (51%), Gaps = 6/145 (4%)
Frame = +2
Query: 211 RVKGIITVSRSIGDTYLKRPEFSLDESFPKFEEVPEPFIRGV--LSAEPEMRSRDLTEND 268
RVKG + V+R G +LKRP F+ P E ++ LS + L+ +D
Sbjct: 5 RVKGQLKVTRPFGAGFLKRPSFNE----PLLEMFRVDYVGNAPYLSCTSAVLHHRLSSSD 172
Query: 269 KFLIFASDGLWDFLSNEQAVE----IVQNNSRNGIAKRLVSTVLAQAAANRNSTYNTMKN 324
+FL+ +SDGL+ + +NE+ V ++N A L++ +L +AA ++ +
Sbjct: 173 RFLVLSSDGLYQYFNNEEVVAHVTWFMENVPEGDPAPYLIAELLFRAAKKNGMDFHEL-- 346
Query: 325 ANLGRGDGNRRYFHDDISVIVVFLD 349
LG G+RR +HDD+SV+VV L+
Sbjct: 347 --LGIPQGDRRKYHDDVSVMVVSLE 415
>TC11286 homologue to GB|AAO63448.1|28951049|BT005384 At4g03415 {Arabidopsis
thaliana;}, partial (46%)
Length = 996
Score = 64.3 bits (155), Expect = 4e-11
Identities = 47/157 (29%), Positives = 74/157 (46%)
Frame = +3
Query: 251 GVLSAEPEMRSRDLTENDKFLIFASDGLWDFLSNEQAVEIVQNNSRNGIAKRLVSTVLAQ 310
GV+S PE R LT+ D+F++ ASDG+WD LSNE+ VEIV ++ A R TV+
Sbjct: 207 GVISI-PEFSHRQLTDRDQFIVIASDGVWDVLSNEEVVEIVSSSPTRASAAR---TVVNS 374
Query: 311 AAANRNSTYNTMKNANLGRGDGNRRYFHDDISVIVVFLDKKSILRMPLHNLSYKSSSARP 370
AA Y T + DD +V+ +FLD K + S++ +
Sbjct: 375 AAREWKLKYPTSR--------------MDDCAVVCLFLDGKMDSESDYDEQGFSSATIQS 512
Query: 371 TTSAFAESGLTMHGLQRLQKTIKNRFQASSSQEGESS 407
S + + Q+ + ++ F SS+E E++
Sbjct: 513 NHSG---NPIESDDGQKSEPCLQRNFTVRSSEEDETN 614
>AV415023
Length = 385
Score = 63.5 bits (153), Expect = 6e-11
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = +2
Query: 35 DLKRHCYGQFSSAFVQANEAMEDHSQVEVASRKALFLGVYDGHAGFEASVFITQHLFDHL 94
DLK H G FS A QAN ++ED SQV S A ++GVYDGH+G +AS F+ HLF +L
Sbjct: 182 DLKPHASGDFSIAVAQANSSLEDQSQV-FTSPSATYVGVYDGHSGPQASRFVNNHLFPYL 358
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.316 0.131 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,402,681
Number of Sequences: 28460
Number of extensions: 73268
Number of successful extensions: 426
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 389
length of query: 436
length of database: 4,897,600
effective HSP length: 93
effective length of query: 343
effective length of database: 2,250,820
effective search space: 772031260
effective search space used: 772031260
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Medicago: description of AC125478.13