BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124966.7 + phase: 0 /pseudo
(1084 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP062486 120 9e-28
AV779915 115 3e-26
BP053696 62 6e-10
TC9200 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1, ... 50 2e-06
TC11270 similar to UP|Q9LM88 (Q9LM88) F2D10.15, partial (9%) 48 7e-06
TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Ar... 46 4e-05
CB829198 44 2e-04
TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%) 43 2e-04
TC8917 similar to UP|AAH64262 (AAH64262) MGC76273 protein, parti... 43 3e-04
TC12988 similar to UP|CYP1_BRUMA (Q27450) Peptidylprolyl isomera... 43 3e-04
AV416122 42 7e-04
TC8309 UP|O22306 (O22306) Nlj21, complete 42 7e-04
BP034655 41 0.001
TC17157 similar to UP|CAD27462 (CAD27462) Nucleosome assembly pr... 40 0.003
TC14791 similar to UP|Q9LJ04 (Q9LJ04) ESTs AU082210(C53655), par... 39 0.004
TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (... 39 0.004
TC16959 38 0.008
TC18746 weakly similar to UP|Q7XIG8 (Q7XIG8) AcinusL protein-lik... 37 0.013
TC9022 similar to PIR|T46225|T46225 alpha NAC-like protein - Ara... 37 0.013
TC8053 similar to UP|Q94A20 (Q94A20) AT4g15470/dl3775w, partial ... 37 0.013
>BP062486
Length = 561
Score = 120 bits (302), Expect = 9e-28
Identities = 57/76 (75%), Positives = 64/76 (84%), Gaps = 2/76 (2%)
Frame = -2
Query: 753 CGIEEAKAICEPEIIRQLFTWQKQLKIYLAPFLHGRRYTSFGRHFTKIDKLKEIVDRLHW 812
C IE+AKAICEP I+ QLF QK+LK+YLAPFLHG RYTS+GRHFTKIDKLKE+VDRLH
Sbjct: 560 CSIEDAKAICEPGIVHQLFVCQKRLKVYLAPFLHGMRYTSYGRHFTKIDKLKEVVDRLHC 381
Query: 813 YVQSGDTVLD--FCCG 826
YVQ+GDTV FC G
Sbjct: 380 YVQNGDTVCGCLFCFG 333
>AV779915
Length = 534
Score = 115 bits (289), Expect = 3e-26
Identities = 57/128 (44%), Positives = 83/128 (64%)
Frame = +2
Query: 1 MASSDEEGEIVPDSVDGYWFENDKAEFVSLSSLTLLWSVNDVTCNSEAKVFLRGTTDNGL 60
MASSD+E E P SV Y+F +DK VSL+ L + W+ ++ KVF+ G DNGL
Sbjct: 134 MASSDDEDETQPISVSNYYFVDDKDALVSLAVLPIQWNKSESLDGKNEKVFIHGAADNGL 313
Query: 61 QKIHKQIIGWRFELSFEQPEISVLLREKYWMTLLKPSKCFENTIRSVLVTVYWLHCVKWK 120
Q I Q+I W F+LS+ +PEISVL ++ W+ L KP K +E+TIR++ +T+++L VK
Sbjct: 314 QTIFMQVIAWSFDLSYVRPEISVLPKDGKWVKLQKPRKSYEDTIRTIFITIHFLSHVKRN 493
Query: 121 PEESRASI 128
P+ S S+
Sbjct: 494 PDISAKSM 517
>BP053696
Length = 509
Score = 61.6 bits (148), Expect = 6e-10
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = -1
Query: 789 RYTSFGRHFTKIDKLKEIVDRLHWYVQSGDTV 820
RYTS+GRHFTKIDKLKE+VDRLH YV +GDTV
Sbjct: 506 RYTSYGRHFTKIDKLKEVVDRLHCYVXNGDTV 411
>TC9200 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1, partial
(31%)
Length = 727
Score = 49.7 bits (117), Expect = 2e-06
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Frame = +1
Query: 174 TKKLKVIVESEENPEQ--------ENDIVESEEEDPEEENDIVESEEDPEQENDIVESEE 225
TKK K++ +S ++ E E ++ E EE + E E ++ E EE+ E+E + E EE
Sbjct: 106 TKKRKLVPKSSQSAELPFKLQNKLEAEVQEYEEVEEEVEEEVEEEEEEEEEEEEGEEEEE 285
Query: 226 EDLEKENDMVESAEEDPEEENDMVE 250
E+ E+E E+ EED E ++E
Sbjct: 286 EEEEEEEVEAEAEEEDDEPIQKLLE 360
Score = 44.3 bits (103), Expect = 1e-04
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Frame = +1
Query: 185 ENPEQENDIVESEEEDPEEE--NDIV-----------ESEEDPEQENDIVESEEEDLEKE 231
ENP + S +E P E N+ + +S E P + + +E+E ++ E+
Sbjct: 28 ENPSFNPHSLASLQESPNEAMVNESITKKRKLVPKSSQSAELPFKLQNKLEAEVQEYEEV 207
Query: 232 NDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDK 276
+ VE E+ EEE + E EE+ EEE + E E + EEE+D+
Sbjct: 208 EEEVEEEVEEEEEEEEEEEEGEEEEEEEEE-EEEVEAEAEEEDDE 339
Score = 36.6 bits (83), Expect = 0.022
Identities = 24/95 (25%), Positives = 46/95 (48%)
Frame = +1
Query: 196 SEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEED 255
S+ E+P + S ++ E + ES + + +SAE + +N + +E
Sbjct: 19 SKSENPSFNPHSLASLQESPNEAMVNESITKKRKLVPKSSQSAELPFKLQNKLEAEVQEY 198
Query: 256 PEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQD 290
E E ++ E EE+ EEE ++ +GE +EE++
Sbjct: 199 EEVEEEVEEEVEEEEEEEEEEEEGEEEEEEEEEEE 303
Score = 34.3 bits (77), Expect = 0.11
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKEN--DMVESAE 239
E EE E+E + E EEE+ EEE + E E++++ ++ E + KE ++ A
Sbjct: 226 EVEEEEEEEEEEEEGEEEEEEEEEEEEVEAEAEEEDDEPIQKLLEPMGKEQIISLLADAA 405
Query: 240 EDPEEENDMVES-AEED 255
+ + D + A+ED
Sbjct: 406 SNHRDVADRIRKVADED 456
>TC11270 similar to UP|Q9LM88 (Q9LM88) F2D10.15, partial (9%)
Length = 735
Score = 48.1 bits (113), Expect = 7e-06
Identities = 34/108 (31%), Positives = 55/108 (50%)
Frame = +3
Query: 175 KKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDM 234
KKLK++ E+ N VE EEED E+E + ++ + + ++EED E+EN
Sbjct: 300 KKLKLV-------EKLNQGVEEEEEDEEDEEE--QTPHPTRGRSRVEHAQEEDEEEEN-- 446
Query: 235 VESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGV 282
EE+ EEE +VE + + +E+ D E E + K D +G+
Sbjct: 447 ---GEEEEEEEEVVVEDEQGNEDEDEDEEEEGVVVVEVKGRKVDSKGL 581
Score = 31.6 bits (70), Expect = 0.70
Identities = 22/71 (30%), Positives = 37/71 (51%)
Frame = +3
Query: 157 EAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQ 216
E + D + + + H T+ + ++E E+E + EEE+ EEE +VE E+ E
Sbjct: 339 EEEEEDEEDEEEQTPHPTRGRSRVEHAQEEDEEEEN---GEEEE-EEEEVVVEDEQGNED 506
Query: 217 ENDIVESEEED 227
E+ E EEE+
Sbjct: 507 ED---EDEEEE 530
>TC11009 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;}, partial (44%)
Length = 700
Score = 45.8 bits (107), Expect = 4e-05
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 17/128 (13%)
Frame = +2
Query: 182 ESEENPEQENDIV------ESEEEDPEEENDIV---------ESEEDPEQENDIVESEEE 226
E ++ E ++D + +EED EEE + + ++D + ++D E EEE
Sbjct: 50 EDDDGDEDDDDDAPGGGDDDDDEEDEEEEGGVEGGRGGGGDPDDDDDDDDDDDEEEEEEE 229
Query: 227 DLEKEN--DMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLN 284
DL E +A ED E +D +E + +ND E A + + DG G
Sbjct: 230 DLGTEYLVRRTVAAAEDEEASSDFEPEEDEGDDNDNDDGEKAGVPSKRKRSDKDGSG--- 400
Query: 285 LDEEQDIG 292
D++ D G
Sbjct: 401 -DDDSDDG 421
Score = 45.4 bits (106), Expect = 5e-05
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Frame = +2
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIV--ESEEEDLEKENDMVESAE 239
E +++ +++D E +++D D + EED E+E + D + ++D + +
Sbjct: 29 EDDDDDGEDDDGDEDDDDDAPGGGDDDDDEEDEEEEGGVEGGRGGGGDPDDDDDDDDDDD 208
Query: 240 EDPEEENDM--------VESAEEDPEEENDMVESAEEDPEEENDKSDGE 280
E+ EEE D+ +A ED E +D EED ++ND DGE
Sbjct: 209 EEEEEEEDLGTEYLVRRTVAAAEDEEASSDF--EPEEDEGDDNDNDDGE 349
Score = 35.0 bits (79), Expect = 0.064
Identities = 26/101 (25%), Positives = 46/101 (44%), Gaps = 15/101 (14%)
Frame = +2
Query: 209 ESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMV--ESAEEDPEEENDMVESA 266
E ++D +++D E +++D D + EED EEE + DP++++D +
Sbjct: 29 EDDDDDGEDDDGDEDDDDDAPGGGDD-DDDEEDEEEEGGVEGGRGGGGDPDDDDDDDDDD 205
Query: 267 EEDPEEEND-------------KSDGEGVLNLDEEQDIGYD 294
+E+ EEE D D E + + E+D G D
Sbjct: 206 DEEEEEEEDLGTEYLVRRTVAAAEDEEASSDFEPEEDEGDD 328
Score = 28.1 bits (61), Expect = 7.8
Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 15/89 (16%)
Frame = +2
Query: 182 ESEENPEQENDIVESEEED---------------PEEENDIVESEEDPEQENDIVESEEE 226
+ +++ + ++D E EEED EE + E EED +ND + E+
Sbjct: 176 DDDDDDDDDDDEEEEEEEDLGTEYLVRRTVAAAEDEEASSDFEPEEDEGDDNDNDDGEKA 355
Query: 227 DLEKENDMVESAEEDPEEENDMVESAEED 255
+ + + +++D ++D + E+D
Sbjct: 356 GVPSKR---KRSDKDGSGDDDSDDGGEDD 433
>CB829198
Length = 562
Score = 43.5 bits (101), Expect = 2e-04
Identities = 32/151 (21%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Frame = +3
Query: 116 CVKWKPEESRASILVKVLKEF-SSFDITPSENDVLCHMALISEAVKRDTDLTKS-KDVHT 173
C++ P+ S L+ L+EF S D+ + A + ++ D + S +
Sbjct: 24 CIRHSPQMVSESELIGRLREFLRSSDLNTTTT------ATVRRQLESDFGIDLSDRKAFI 185
Query: 174 TKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKEND 233
+++ + +++E P++E E ++ E +ND VE + + + + E E+ED + EN+
Sbjct: 186 REQVDLFLQTEHQPQEE----EQHDDQEEPQNDDVEESQHSDSKEETEEEEDEDGDNENN 353
Query: 234 MVESAEEDPEEENDMVESAEEDPEEENDMVE 264
+ A+ +++N E + +N++V+
Sbjct: 354 KPKRAKAAKKKKN-----KERSNKSDNEVVK 431
Score = 33.9 bits (76), Expect = 0.14
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 228 LEKENDMVESAEEDP--EEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGE 280
+ ++ D+ E P EE++D E + D EE+ +S EE EEE++ D E
Sbjct: 183 IREQVDLFLQTEHQPQEEEQHDDQEEPQNDDVEESQHSDSKEETEEEEDEDGDNE 347
>TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%)
Length = 1008
Score = 43.1 bits (100), Expect = 2e-04
Identities = 26/62 (41%), Positives = 37/62 (58%)
Frame = -2
Query: 184 EENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPE 243
EEN E E E+ED E++ D + +ED ++E+D E EEE+ +E D E EED E
Sbjct: 443 EENGEDE------EDEDGEDQEDDDDDDEDDDEEDDGGEDEEEEGVEEEDN-EDEEEDEE 285
Query: 244 EE 245
+E
Sbjct: 284 DE 279
Score = 42.0 bits (97), Expect = 5e-04
Identities = 24/59 (40%), Positives = 36/59 (60%)
Frame = -2
Query: 201 PEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEE 259
PEE + E E+ +QE+D + ++ED ++E+D E EE+ EE D E EED E+E
Sbjct: 446 PEENGEDEEDEDGEDQEDD--DDDDEDDDEEDDGGEDEEEEGVEEEDN-EDEEEDEEDE 279
Score = 41.2 bits (95), Expect = 9e-04
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Frame = -2
Query: 149 LCHMALISEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQEND--IVESEEEDPEEE-- 204
LC + LI+ A + ++S+D + + + E + + + D E EE+ E+
Sbjct: 701 LCGLLLINMATTKGETKSQSEDKQHDAEGEDGNDDEGDEDDDGDGPFGEGEEDLSSEDGA 522
Query: 205 ------NDIVESEEDPE--------QENDIVESEEEDLEKENDMVESAEEDPEEENDMVE 250
N+ S++ PE E + + E+ED E + D + E+D EE++ +
Sbjct: 521 GYGNNSNNKSNSKKAPEGGPGAGAGPEENGEDEEDEDGEDQEDDDDDDEDDDEEDDGGED 342
Query: 251 SAEEDPEEENDMVESAEEDPEEE 273
EE EEE++ E EED E+E
Sbjct: 341 EEEEGVEEEDN--EDEEEDEEDE 279
>TC8917 similar to UP|AAH64262 (AAH64262) MGC76273 protein, partial (3%)
Length = 676
Score = 42.7 bits (99), Expect = 3e-04
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Frame = +2
Query: 181 VESEENPEQENDIVESEEEDPEEENDIV-----ESEEDPEQENDIVESE--EEDLEKEND 233
V+ E+ E E ++ + EE P E+N + E+EE+ ++ + V++E EE E
Sbjct: 197 VKVEQVQESEANVEKKTEETPNEDNKSLSTLLNENEEEAKKPEEEVQAEPKEEKATTEEV 376
Query: 234 MVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEE 273
VE+ E +P+ E E+P+EE + EE P+ E
Sbjct: 377 KVETKEVNPKPE--------EEPKEEEPKAQVQEEKPKTE 472
Score = 32.3 bits (72), Expect = 0.41
Identities = 20/64 (31%), Positives = 34/64 (52%), Gaps = 1/64 (1%)
Frame = +2
Query: 211 EEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVES-AEEDPEEENDMVESAEED 269
E PE +N+ V+ E+ E E ++ + EE P E+N + + E+ EE E + +
Sbjct: 167 EPVPEIKNEEVKVEQVQ-ESEANVEKKTEETPNEDNKSLSTLLNENEEEAKKPEEEVQAE 343
Query: 270 PEEE 273
P+EE
Sbjct: 344 PKEE 355
Score = 28.9 bits (63), Expect = 4.6
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +2
Query: 222 ESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEG 281
E E E +N+ V+ E+ E E ++ + EE P E+N + + + EEE K + E
Sbjct: 158 EGPEPVPEIKNEEVK-VEQVQESEANVEKKTEETPNEDNKSLSTLLNENEEEAKKPEEEV 334
Query: 282 VLNLDEEQ 289
EE+
Sbjct: 335 QAEPKEEK 358
>TC12988 similar to UP|CYP1_BRUMA (Q27450) Peptidylprolyl isomerase 1
(Peptidylprolyl cis-trans isomerase 1) (PPIase 1)
(Cyclophilin) (BmCYP-1) , partial (4%)
Length = 453
Score = 42.7 bits (99), Expect = 3e-04
Identities = 28/76 (36%), Positives = 39/76 (50%)
Frame = +2
Query: 185 ENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEE 244
E P++E E EEED E D E+PE +N +S EE+LE A+ +E
Sbjct: 47 EYPDEE----EFEEEDEEAVEDSEFELEEPESDNSSNKSSEENLEHHAVSKHVADPLYDE 214
Query: 245 ENDMVESAEEDPEEEN 260
E D E A +D E+E+
Sbjct: 215 EFDDYEGANDDSEDED 262
>AV416122
Length = 414
Score = 41.6 bits (96), Expect = 7e-04
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Frame = +3
Query: 187 PEQENDIVESEEEDPEEENDIVESEEDPEQENDI-----VESEEEDLEKENDMVESAEED 241
P + + + + +E+ P + + + E ND S +D + E+A +D
Sbjct: 96 PSKRHPVPDPQEQPPTKAPKLAATPEPNPDSNDNNNNHPAVSATDDCSSQPK--EAANDD 269
Query: 242 PEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEE 288
E +ND+ EE+ ++E D EED EE+++ D G +D +
Sbjct: 270 NEPDNDVQFEGEEEEDDEED---KEEEDEEEDDEDDDSNGEAEVDRK 401
Score = 37.0 bits (84), Expect = 0.017
Identities = 29/130 (22%), Positives = 55/130 (42%)
Frame = +3
Query: 153 ALISEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEE 212
+L+S +L ++ K + + +E P + + + E + ND +
Sbjct: 33 SLVSSIPTFMAELNHHQEPTFPSKRHPVPDPQEQPPTKAPKLAATPEPNPDSNDNNNNHP 212
Query: 213 DPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEE 272
+D +E +N+ + + EEE D E EE+ EEE+D E + + E
Sbjct: 213 AVSATDDCSSQPKEAANDDNEPDNDVQFEGEEEEDDEEDKEEEDEEEDD--EDDDSNGEA 386
Query: 273 ENDKSDGEGV 282
E D+ G+G+
Sbjct: 387 EVDRK-GKGI 413
>TC8309 UP|O22306 (O22306) Nlj21, complete
Length = 1063
Score = 41.6 bits (96), Expect = 7e-04
Identities = 51/209 (24%), Positives = 80/209 (37%), Gaps = 59/209 (28%)
Frame = +3
Query: 124 SRASILVKVLKEFS---SFDITPSENDVLCHMALISEAVKRDTDLTKSKDVHTTKKLKVI 180
S+ASI+ S SF T + +A + A+ DT KD H K + +
Sbjct: 108 SKASIVSYTTLNLSLLESFAYTLCISMATAQVASANSALHDDTTKASLKD-HEEKTTEQV 284
Query: 181 VE---------SEENPEQENDIVESEEEDPEEENDIVESEE------------------- 212
VE SE+ E+++ + E+ E +P E+N +E+E
Sbjct: 285 VETQTPEPEPVSEKTKEEDSAVTEASEPEPTEDNPSIEAETTEVVEEVVTVTVTDEPKVE 464
Query: 213 ---DPEQENDIVESEE-------------------------EDLEKENDMVESAEEDPEE 244
D E + + E++E ED KE + V AE + +E
Sbjct: 465 EKTDGEAKKEATETKETKESADPVEVQAPEAGEEPETVTLKEDASKEEEKV--AEPEAKE 638
Query: 245 ENDMVESAEEDPEEENDMVESAEEDPEEE 273
E E+ +E EEE E ++E EEE
Sbjct: 639 EVVNTEAPDEKKEEEKLDTEGSDEKKEEE 725
Score = 37.4 bits (85), Expect = 0.013
Identities = 32/109 (29%), Positives = 49/109 (44%)
Frame = +3
Query: 163 TDLTKSKDVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVE 222
TD K ++ + K E++E E D VE + + EE + V +ED +E + V
Sbjct: 444 TDEPKVEEKTDGEAKKEATETKETKESA-DPVEVQAPEAGEEPETVTLKEDASKEEEKVA 620
Query: 223 SEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPE 271
E E N E+ +E EEE E ++E EEE + + E E
Sbjct: 621 EPEAKEEVVN--TEAPDEKKEEEKLDTEGSDEKKEEEEVIKVAPAEKTE 761
Score = 36.6 bits (83), Expect = 0.022
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +3
Query: 186 NPEQENDIVESEEEDPEEEN--DIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPE 243
N +D ++ +D EE+ +VE++ PE E +++EED + + E++E +P
Sbjct: 213 NSALHDDTTKASLKDHEEKTTEQVVETQT-PEPEPVSEKTKEED----SAVTEASEPEPT 377
Query: 244 EENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQD 290
E+N +E+ E E ++V D + +K+DGE E ++
Sbjct: 378 EDNPSIEA--ETTEVVEEVVTVTVTDEPKVEEKTDGEAKKEATETKE 512
>BP034655
Length = 517
Score = 40.8 bits (94), Expect = 0.001
Identities = 40/134 (29%), Positives = 58/134 (42%), Gaps = 11/134 (8%)
Frame = +1
Query: 183 SEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDP 242
S+++ E+E + E EEE+ EEE E EE+ E E D E E+ED + S P
Sbjct: 133 SDDDEEEEEEEEEEEEEEEEEE----EEEEEEEDEEDDEEDEDEDY---IPVAPSHRVSP 291
Query: 243 E-EENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGE---GVLNLDEEQDIGYD---T 295
+N +S E +++ +EED + +GE L + G D
Sbjct: 292 NVHQNPTSDSVEVILIPDSEQQNYSEEDGNKRRRIEEGEAPTSSLGSQGNELTGTDIDGL 471
Query: 296 VCAIC----DNGGE 305
VC IC N GE
Sbjct: 472 VCPICMDAWTNNGE 513
Score = 35.4 bits (80), Expect = 0.049
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +1
Query: 227 DLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDK 276
D +D E EE+ EEE + E EE+ EEE+ EED EE+ D+
Sbjct: 121 DFGLSDDDEEEEEEEEEEEEEEEEEEEEEEEEED------EEDDEEDEDE 252
>TC17157 similar to UP|CAD27462 (CAD27462) Nucleosome assembly protein
1-like protein 3, partial (81%)
Length = 1298
Score = 39.7 bits (91), Expect = 0.003
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Frame = +2
Query: 165 LTKSKDVHTTKKLKVIVESEE--------NPEQENDIVESEEEDPEEENDIVESEEDPEQ 216
+ K K +K K I ++E+ NP Q E++D +++ + E + E
Sbjct: 512 ILKKKPKKGSKNTKPITKTEKCESFFNFFNPPQV-----PEDDDDIDDDAVEELQNLMEH 676
Query: 217 ENDIVESEEEDL----------EKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESA 266
+ DI + + + E E E EED E+ +ED +E++D E
Sbjct: 677 DYDIGSTIRDKIIPHAVSWFTGEAEQSDFEDIEEDDED-------GDEDEDEDDDDDEEE 835
Query: 267 EEDPEEENDKSDGEG 281
E+D +++ D +GEG
Sbjct: 836 EDDDDDDEDDEEGEG 880
Score = 37.4 bits (85), Expect = 0.013
Identities = 28/98 (28%), Positives = 49/98 (49%), Gaps = 4/98 (4%)
Frame = +2
Query: 184 EENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIV----ESEEEDLEKENDMVESAE 239
E++ + ++D VE + E + DI + D + + E+E+ D E + E +
Sbjct: 617 EDDDDIDDDAVEELQNLMEHDYDIGSTIRDKIIPHAVSWFTGEAEQSDFEDIEEDDEDGD 796
Query: 240 EDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKS 277
ED +E++D +D EEE+D + +ED EE KS
Sbjct: 797 EDEDEDDD------DDEEEEDD--DDDDEDDEEGEGKS 886
Score = 33.5 bits (75), Expect = 0.18
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 195 ESEEEDPEE-ENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAE 253
E+E+ D E+ E D + +ED ++++D E EE+D + + D E + + +
Sbjct: 743 EAEQSDFEDIEEDDEDGDEDEDEDDDDDEEEEDDDDDDEDDEEGEGKSKSKSGSKARPGK 922
Query: 254 EDPEE 258
+ P E
Sbjct: 923 DQPTE 937
Score = 30.0 bits (66), Expect = 2.0
Identities = 16/70 (22%), Positives = 32/70 (44%)
Frame = +2
Query: 203 EENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDM 262
E++D + EED E +ED ++++D E E+D +++ D E + +
Sbjct: 749 EQSDFEDIEEDDEDG-------DEDEDEDDDDDEEEEDDDDDDEDDEEGEGKSKSKSGSK 907
Query: 263 VESAEEDPEE 272
++ P E
Sbjct: 908 ARPGKDQPTE 937
Score = 29.6 bits (65), Expect = 2.7
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 211 EEDPEQENDIVESEEEDLEKENDMVESAEED--PEEENDMVESAEE-DPEEENDMVESAE 267
E+D + ++D VE + +E + D+ + + P + AE+ D E+ + E +
Sbjct: 617 EDDDDIDDDAVEELQNLMEHDYDIGSTIRDKIIPHAVSWFTGEAEQSDFEDIEEDDEDGD 796
Query: 268 EDPEEENDKSDGEGVLNLDEEQD 290
ED +E++D + E + D+E D
Sbjct: 797 EDEDEDDDDDEEEEDDDDDDEDD 865
>TC14791 similar to UP|Q9LJ04 (Q9LJ04) ESTs AU082210(C53655), partial (37%)
Length = 1779
Score = 38.9 bits (89), Expect = 0.004
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 7/135 (5%)
Frame = +2
Query: 183 SEENPEQENDIVESEEEDPEEENDIVESEEDPE----QENDIVESEEEDLEKENDMVESA 238
+E P+Q+ + +E + P E + + N+ E EEEDLE E + VE
Sbjct: 317 TESEPQQQQETLEDNADAPNESSAAAAAAASESVANGSNNNEEEEEEEDLELEEEPVERL 496
Query: 239 EE--DPEEENDMV-ESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIGYDT 295
E E+ + +V ++AE+ P+ ++ + A+ DP G G D +T
Sbjct: 497 LEPFTREQLHSLVKQAAEKYPDFVENVRQLADVDPAHRKIFVHGLG-------WDTTAET 655
Query: 296 VCAICDNGGEILPCE 310
+ ++ GEI C+
Sbjct: 656 LTSVFSKYGEIEDCK 700
Score = 37.4 bits (85), Expect = 0.013
Identities = 28/91 (30%), Positives = 47/91 (50%)
Frame = +2
Query: 182 ESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEED 241
E+E+ P Q +D VE EE+DPE +E +P+Q+ + +E + D E+ +A
Sbjct: 248 ETEDQP-QIDDAVE-EEQDPEAP---ATTESEPQQQQETLE-DNADAPNESSAAAAAAAS 409
Query: 242 PEEENDMVESAEEDPEEENDMVESAEEDPEE 272
N + EE+ EE+ ++ EE+P E
Sbjct: 410 ESVANGSNNNEEEEEEEDLEL----EEEPVE 490
>TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (SPBC3D6.14C
protein) (Fragment), partial (15%)
Length = 543
Score = 38.9 bits (89), Expect = 0.004
Identities = 35/130 (26%), Positives = 62/130 (46%), Gaps = 5/130 (3%)
Frame = +3
Query: 128 ILVKVLKEFSSFDITPSENDVLCHMALISEAVKRDTDLTKSK--DVHTTKKLKVIVESEE 185
+L V S+ IT S +DV+ VK DL + ++H + ++ + E
Sbjct: 60 LLASVAAMKSAPIITFSSDDVV---------VKSPNDLRLYRLIELHNGLQAWLVHDPEI 212
Query: 186 NPEQENDIVES---EEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDP 242
P+ V++ EEED +EE D + ++D + ++D EEED + +++ E +EE
Sbjct: 213 YPDGPPKPVQTDNEEEEDDDEEEDDEDEDDDDDDDDDDDGEEEEDDDDDDEEEEGSEEVE 392
Query: 243 EEENDMVESA 252
E D + A
Sbjct: 393 VEGKDGAKGA 422
Score = 38.1 bits (87), Expect = 0.008
Identities = 20/58 (34%), Positives = 36/58 (61%)
Frame = +3
Query: 222 ESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDG 279
E EE+D E+E+D E ++D ++++D E EED +++++ E +EE E D + G
Sbjct: 252 EEEEDDDEEEDDEDEDDDDDDDDDDDGEE--EEDDDDDDEEEEGSEEVEVEGKDGAKG 419
Score = 35.8 bits (81), Expect = 0.037
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +3
Query: 236 ESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGE 280
E E+D EEE+D E ++D ++++D E ++D ++E ++ E
Sbjct: 252 EEEEDDDEEEDDEDEDDDDDDDDDDDGEEEEDDDDDDEEEEGSEE 386
Score = 34.7 bits (78), Expect = 0.083
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +3
Query: 209 ESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEE 259
E EED ++E D + +E+D + ++D + EE+ ++++D E E+ E E
Sbjct: 252 EEEEDDDEEED--DEDEDDDDDDDDDDDGEEEEDDDDDDEEEEGSEEVEVE 398
Score = 33.5 bits (75), Expect = 0.18
Identities = 13/44 (29%), Positives = 27/44 (60%)
Frame = +3
Query: 239 EEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGV 282
EED +EE D + ++D ++++D E E+D +++ ++ E V
Sbjct: 258 EEDDDEEEDDEDEDDDDDDDDDDDGEEEEDDDDDDEEEEGSEEV 389
Score = 33.1 bits (74), Expect = 0.24
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 239 EEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIGYD 294
+ D EEE D E +++ E+++D + ++ EEE+D D E +E + G D
Sbjct: 240 QTDNEEEEDDDEEEDDEDEDDDDDDDDDDDGEEEEDDDDDDEEEEGSEEVEVEGKD 407
Score = 32.3 bits (72), Expect = 0.41
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +3
Query: 225 EEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGE 280
+ D E+E D E E+D +E++D + ++D EEE D + EE+ E + +G+
Sbjct: 240 QTDNEEEEDDDEE-EDDEDEDDDDDDDDDDDGEEEEDDDDDDEEEEGSEEVEVEGK 404
Score = 30.0 bits (66), Expect = 2.0
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 253 EEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIGYDTVCAICDNGGEILPCEGR 312
EED +EE D + E+D ++++D DGE +EE D D + G E + EG+
Sbjct: 258 EEDDDEEED--DEDEDDDDDDDDDDDGE-----EEEDDDDDDEE----EEGSEEVEVEGK 404
>TC16959
Length = 717
Score = 38.1 bits (87), Expect = 0.008
Identities = 17/68 (25%), Positives = 39/68 (57%)
Frame = +1
Query: 188 EQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEEND 247
+ ++D ++E++ +++ ++ +P+ E DI++ +E +L K ND++ D +E N
Sbjct: 148 DTDSDASDNEKKVCASDSEKIDCSPNPDSETDIIDHDENNLGKRNDII-----DHDENNQ 312
Query: 248 MVESAEED 255
+A ED
Sbjct: 313 GKRNANED 336
Score = 36.6 bits (83), Expect = 0.022
Identities = 23/95 (24%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Frame = +1
Query: 134 KEFSSFDITPSENDVLCHMALISEAVKRDTDLTKS---KDVHTTKKLKVIVESEENPEQE 190
K+ SF + + + ++A +++K DTD S K V + K+ + NP+ E
Sbjct: 64 KKIPSFWASENSTSSVQNIAPSLDSIKLDTDSDASDNEKKVCASDSEKI--DCSPNPDSE 237
Query: 191 NDIVESEEEDPEEENDIVESEEDPEQENDIVESEE 225
DI++ +E + + NDI++ +E+ + + + E +
Sbjct: 238 TDIIDHDENNLGKRNDIIDHDENNQGKRNANEDSK 342
>TC18746 weakly similar to UP|Q7XIG8 (Q7XIG8) AcinusL protein-like, partial
(6%)
Length = 709
Score = 37.4 bits (85), Expect = 0.013
Identities = 45/167 (26%), Positives = 76/167 (44%), Gaps = 18/167 (10%)
Frame = +3
Query: 140 DITPS----ENDVLCHMALISEAVKRDTDLTKSKDVHTTKKLKVIVESEENPEQENDIVE 195
D+TP+ EN V + +K D+ + S ++ +LK + ++ N + E DIV
Sbjct: 99 DLTPNSSLPENQVSEVNPSLGSHLKSDSISSNSVSINQKNELKDTIIAD-NVKLEEDIVR 275
Query: 196 SEE-EDPEEENDIVESE-------EDPEQENDIVESEEEDLEKENDMVESAEEDPE--EE 245
E E+P NDI + +P ++ VE + + N ++ ED E E+
Sbjct: 276 PEMVEEPSSNNDIPGHDVSHSMDVGEPHKKKTPVEENSYNNKSPNLNKPNSSEDVEYPEK 455
Query: 246 NDMVESAEEDPEEENDMVESAEEDP----EEENDKSDGEGVLNLDEE 288
++ S+ +D EE D+ ES + D +E DK + V L EE
Sbjct: 456 LNLDRSSGDDSMEE-DLPESKQYDSKFNVDELRDKGESVEVSILKEE 593
>TC9022 similar to PIR|T46225|T46225 alpha NAC-like protein - Arabidopsis
thaliana {Arabidopsis thaliana;}, partial (75%)
Length = 1083
Score = 37.4 bits (85), Expect = 0.013
Identities = 20/73 (27%), Positives = 41/73 (55%)
Frame = +3
Query: 207 IVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESA 266
+V++ + E ++ +EE L+K+ + E++ +VE ++D ++E D E
Sbjct: 114 VVDASSEAEALEQVLSAEETTLKKK-------PQPQEDDAPIVEDVKDDDKDEADDDED- 269
Query: 267 EEDPEEENDKSDG 279
E+D +E++DK DG
Sbjct: 270 EDDDDEDDDKEDG 308
>TC8053 similar to UP|Q94A20 (Q94A20) AT4g15470/dl3775w, partial (82%)
Length = 1109
Score = 37.4 bits (85), Expect = 0.013
Identities = 28/72 (38%), Positives = 36/72 (49%)
Frame = -3
Query: 201 PEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEEN 260
PE+ N E EED E+E + EEE V+ + ED E+ N ES E+D E
Sbjct: 366 PEQRNQKDEGEEDEEKEERRIAPEEE--------VKRSVEDGEDGN---ESGEDDLSGE- 223
Query: 261 DMVESAEEDPEE 272
D V A+E P E
Sbjct: 222 DAVHLADETPSE 187
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.321 0.138 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,887,265
Number of Sequences: 28460
Number of extensions: 332746
Number of successful extensions: 2514
Number of sequences better than 10.0: 125
Number of HSP's better than 10.0 without gapping: 1748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2196
length of query: 1084
length of database: 4,897,600
effective HSP length: 100
effective length of query: 984
effective length of database: 2,051,600
effective search space: 2018774400
effective search space used: 2018774400
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Medicago: description of AC124966.7