TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC123593.7 + phase: 0 
         (467 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC8310 UP|Q9SPM8 (Q9SPM8) Nod factor binding lectin-nucleotide p...   520  e-148
AV421159                                                              231  2e-61
TC17108 homologue to UP|Q84UD8 (Q84UD8) Apyrase-like protein, pa...   146  6e-36
BI419553                                                               73  1e-13
TC8522 similar to UP|AAR23736 (AAR23736) At5g46870, partial (76%)      29  1.9
TC8349                                                                 28  3.2
TC8915 similar to UP|Q8VYH4 (Q8VYH4) AT5g15260/F8M21_150, partia...    28  3.2

>TC8310 UP|Q9SPM8 (Q9SPM8) Nod factor binding lectin-nucleotide
           phosphohydrolase, complete
          Length = 1489

 Score =  520 bits (1338), Expect = e-148
 Identities = 260/443 (58%), Positives = 344/443 (76%), Gaps = 5/443 (1%)
 Frame = +1

Query: 29  ILLITFVLYMMPSSSNYDSAGDYALLNRK--LSPDKKSGGSYAVIFDAGSSGSRVHVFHF 86
           I L+TFV  +MP+ S+    G+  L+NRK  L  +++   SYAVIFDAGS+GSRVHV++F
Sbjct: 55  ISLMTFVFMLMPAISSSQYLGNNILMNRKILLPKNQEPVTSYAVIFDAGSTGSRVHVYNF 234

Query: 87  DQNLDLVHIGKDLELFEQLKPGLSAYAQKPQQAAESLVSLLEKAEGVVPRELRSKTPVRI 146
           DQNLDL+ +  +LE ++ +KPGLS+YA  P++AAESL+ LL++AE VVP   +  TPV++
Sbjct: 235 DQNLDLLPVENELEFYDSVKPGLSSYAANPEEAAESLIPLLKEAENVVPVSQQPNTPVKL 414

Query: 147 GATAGLRALEGDASDKILRAVRDLLKHRSSFKSDADAVTVLDGTQEGAYQWVTINYLLGN 206
           GATAGLR LEG+A++ IL+AVRD+L +RS+    +DAV++LDGTQEG+Y WVTINYLLG 
Sbjct: 415 GATAGLRLLEGNAAENILQAVRDMLSNRSALNVQSDAVSILDGTQEGSYLWVTINYLLGK 594

Query: 207 LGKDYSKTVGVVDLGGGSVQMAYAISESEAAMAPQVMDGEDPYVKEMFLRGRKYYLYVHS 266
           LGK ++KTVGVVDLGGGSVQM YA+S + A  AP+V +GEDPY+K++ L+G+KY LYVHS
Sbjct: 595 LGKRFTKTVGVVDLGGGSVQMTYAVSRNTAKNAPKVPEGEDPYIKKLVLQGKKYDLYVHS 774

Query: 267 YLRYGLLAARAEILKVAGDAENPCILSGSDGTYKYGGKSFKAS--SSGASLNECKSVAHK 324
           YLRYG  A RAEI KVAG + NPCIL+G DG Y Y G  +K S  +SG++LN+C+ +A K
Sbjct: 775 YLRYGREAFRAEIFKVAGGSANPCILAGFDGAYTYSGAEYKVSAPASGSNLNQCRKIALK 954

Query: 325 ALKVNESTCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFVDPNSPVAIVRPAD 384
           ALKVN + C +  CTFGGIWNGGGG GQKNLF+ S F+  + + G +  N P A +RP D
Sbjct: 955 ALKVN-APCPYQNCTFGGIWNGGGGSGQKNLFLTSSFYYLSEDVG-IFVNKPNAKIRPVD 1128

Query: 385 FEDAAKQACQTKLENAKSTYPRV-EEGNLPYLCMDLVYQYTLLVDGFGIYPWQEITLVKK 443
            + AAK AC+T LE+AKS YP + E+ ++ Y+C+DLVY YTLLVDGFG+ P+QE+T+  +
Sbjct: 1129LKTAAKLACKTNLEDAKSKYPDLYEKDSVEYVCLDLVYVYTLLVDGFGLDPFQEVTVANE 1308

Query: 444 VKYDDALVEAAWPLGSAIEAVSS 466
           ++Y DALVEAAWPLG+AIEA+SS
Sbjct: 1309IEYQDALVEAAWPLGTAIEAISS 1377


>AV421159 
          Length = 410

 Score =  231 bits (589), Expect = 2e-61
 Identities = 118/135 (87%), Positives = 127/135 (93%)
 Frame = +2

Query: 112 YAQKPQQAAESLVSLLEKAEGVVPRELRSKTPVRIGATAGLRALEGDASDKILRAVRDLL 171
           YAQ PQQAAESLVSLL+KAE VVPRELRSKT VR+GATAGLRALEGDASD+IL+AVRDLL
Sbjct: 5   YAQNPQQAAESLVSLLDKAESVVPRELRSKTQVRVGATAGLRALEGDASDRILQAVRDLL 184

Query: 172 KHRSSFKSDADAVTVLDGTQEGAYQWVTINYLLGNLGKDYSKTVGVVDLGGGSVQMAYAI 231
           K RSS KS+ADAVTVLDG QEGA+QWVTINYLLGNLGKDYSKTVGVVDLGGGSVQMAYAI
Sbjct: 185 KKRSSLKSEADAVTVLDGVQEGAFQWVTINYLLGNLGKDYSKTVGVVDLGGGSVQMAYAI 364

Query: 232 SESEAAMAPQVMDGE 246
           SE+EAA AP+V DG+
Sbjct: 365 SETEAAQAPKVTDGQ 409


>TC17108 homologue to UP|Q84UD8 (Q84UD8) Apyrase-like protein, partial (16%)
          Length = 573

 Score =  146 bits (369), Expect = 6e-36
 Identities = 67/75 (89%), Positives = 73/75 (97%)
 Frame = +1

Query: 393 CQTKLENAKSTYPRVEEGNLPYLCMDLVYQYTLLVDGFGIYPWQEITLVKKVKYDDALVE 452
           CQTKL +AKSTYP +E+GNLPY+CMDLVYQYTLLVDGFGIYPWQE+TLVKKVKYDDALVE
Sbjct: 16  CQTKLGDAKSTYPHIEDGNLPYICMDLVYQYTLLVDGFGIYPWQEVTLVKKVKYDDALVE 195

Query: 453 AAWPLGSAIEAVSST 467
           AAWPLGSAIEAVSS+
Sbjct: 196 AAWPLGSAIEAVSSS 240


>BI419553 
          Length = 480

 Score = 72.8 bits (177), Expect = 1e-13
 Identities = 35/39 (89%), Positives = 38/39 (96%)
 Frame = +2

Query: 1   MLKRPTRQESLSDKIYRFRGTLLVVSIPILLITFVLYMM 39
           MLKRP RQESLSDKIYRFRGTLLV+SIP++LITFVLYMM
Sbjct: 362 MLKRPGRQESLSDKIYRFRGTLLVISIPLVLITFVLYMM 478


>TC8522 similar to UP|AAR23736 (AAR23736) At5g46870, partial (76%)
          Length = 1069

 Score = 28.9 bits (63), Expect = 1.9
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 311 SGASLNECKSVAHKALKVNESTCTHMKCTF 340
           +GA L EC S+   AL  +E TC +   TF
Sbjct: 902 AGAGLEECTSLVAAALGDSERTCAYWSSTF 813


>TC8349 
          Length = 749

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +2

Query: 278 EILKVAGDAENPCILSGSDGTYKYGGKSFKASSSGAS 314
           + L+VAGD  N   +SGS+G       SFKA+S+  S
Sbjct: 203 QTLRVAGDTSN---VSGSNGPVPSRSNSFKAASNSDS 304


>TC8915 similar to UP|Q8VYH4 (Q8VYH4) AT5g15260/F8M21_150, partial (29%)
          Length = 575

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 12/28 (42%), Positives = 21/28 (74%)
 Frame = -2

Query: 27  IPILLITFVLYMMPSSSNYDSAGDYALL 54
           +P+   +F+L + P+SS++DS+GD  LL
Sbjct: 382 LPMSQESFIL*LYPTSSSFDSSGDPELL 299


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.317    0.135    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,928,263
Number of Sequences: 28460
Number of extensions: 86447
Number of successful extensions: 455
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of query: 467
length of database: 4,897,600
effective HSP length: 94
effective length of query: 373
effective length of database: 2,222,360
effective search space: 828940280
effective search space used: 828940280
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)