BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122723.7 + phase: 0 /pseudo
(1982 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC12450 similar to UP|Q7XJC6 (Q7XJC6) Callose synthase-like prot... 256 3e-68
BP052274 233 1e-63
AV780683 79 9e-15
BP057687 70 4e-12
BP065754 50 3e-06
BP033918 37 0.030
TC11175 weakly similar to GB|AAL06796.1|15809736|AY054135 AT3g60... 32 0.97
TC15945 similar to UP|ANTA_GENTR (Q9ZWR8) Anthocyanin 5-aromatic... 32 0.97
BP065061 31 1.7
TC8780 30 2.8
TC12583 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (PP... 30 4.8
BP058134 30 4.8
TC17411 similar to UP|Q8LDG6 (Q8LDG6) Protein kinase, partial (33%) 30 4.8
TC11531 similar to AAQ56832 (AAQ56832) At2g34040, partial (32%) 29 6.3
BP069580 29 8.2
TC11220 similar to UP|Q96259 (Q96259) AR401, partial (37%) 29 8.2
>TC12450 similar to UP|Q7XJC6 (Q7XJC6) Callose synthase-like protein
(Fragment), partial (20%)
Length = 570
Score = 256 bits (653), Expect = 3e-68
Identities = 142/184 (77%), Positives = 149/184 (80%)
Frame = +2
Query: 1765 VYRLKKVGNLGGKKNKIIYSIQESGES*WRYCCHCDFLSTNMVLYIT*ILQRRAQKVFWC 1824
VY LKKVGNLGGK+NKII +IQ+ ES WRYC HCD LST+MVLYIT* LQRRA KVFW
Sbjct: 17 VYHLKKVGNLGGKRNKIISTIQDCVESYWRYCYHCDSLSTSMVLYIT*NLQRRATKVFWY 196
Query: 1825 MAFRGW*SL*YYL**RLYLLGGVNSVQIFSLSSD*SRG*YS*LLLRFWSF*SPFHI*HRK 1884
MAFRGW*SL*Y L** L LGG NSVQIF+LSS *SR *YS*LL F * PFHI*H +
Sbjct: 197 MAFRGW*SL*YCL**XLCPLGGGNSVQIFNLSSG*SRE*YS*LLSLFLLL*LPFHI*HCR 376
Query: 1885 TLLFAFLPSCQLVGECYRLRKH*SL*YVVLDFGDL*KLLLVVMR*SWVCFCSLLLPFWLG 1944
TLLFAFL SCQLVGECYRL KH*+ Y VLDFGD *KLLL MR WVCFCSLLL FWLG
Sbjct: 377 TLLFAFLRSCQLVGECYRLLKH*NPLYAVLDFGDQ*KLLLADMRL*WVCFCSLLLLFWLG 556
Query: 1945 FLLF 1948
FLLF
Sbjct: 557 FLLF 568
>BP052274
Length = 563
Score = 233 bits (594), Expect(2) = 1e-63
Identities = 131/172 (76%), Positives = 139/172 (80%)
Frame = +1
Query: 1407 ESIYLLEVFLPLHGLCQIKRQVS*QLVRDCWPIP*GFVSTMGILMSLIGFFT*QEGVSVK 1466
E I+ + F HG CQI+RQVS*QLV+DCW IP* FVSTM I MS IGFFT*QEGVSVK
Sbjct: 46 EHIFTWKCFFAGHGSCQIRRQVS*QLVKDCWLIP*RFVSTMVIPMSSIGFFT*QEGVSVK 225
Query: 1467 PPRLSI*VKIFLLASTLHSVKEVLLIMSTYKLGREEMLVSTKFRCLKQK*LMEMESRH*V 1526
P RLSI*VKIFLLASTLHS KE+L IMSTY+LGREEM VSTKF CLKQ+*LM MES+H*V
Sbjct: 226 PGRLSI*VKIFLLASTLHSGKEMLPIMSTYRLGREEMWVSTKFLCLKQR*LMAMESKH*V 405
Query: 1527 ETCTGLGTVLISSECCPVILLQLDFISALL*LFSLYTYFSMVASILFSVALK 1578
E T LGT L SSECCP I QLDFI ALL*LFSLY Y MV SILFSV LK
Sbjct: 406 EMYTDLGTALTSSECCPAISPQLDFILALL*LFSLYMYSFMVGSILFSVGLK 561
Score = 29.6 bits (65), Expect(2) = 1e-63
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2
Query: 1393 RSMMV*GSQVFLD*ESIYL 1411
RSMM *GSQVFLD SIYL
Sbjct: 2 RSMMG*GSQVFLDLGSIYL 58
>AV780683
Length = 482
Score = 78.6 bits (192), Expect = 9e-15
Identities = 36/51 (70%), Positives = 40/51 (77%), Gaps = 2/51 (3%)
Frame = -1
Query: 1931 WVCFCSLLLPFWLGFLLFQNFKPECCSTKRSAEVCKFLVFLED--RGRSAL 1979
W CFCSL P WLGFL FQNF+P CCSTK SAEVCKFLV L+ +GRS+L
Sbjct: 470 WXCFCSLQSPSWLGFLFFQNFRPACCSTKLSAEVCKFLVSLDGQRKGRSSL 318
>BP057687
Length = 573
Score = 69.7 bits (169), Expect = 4e-12
Identities = 47/95 (49%), Positives = 51/95 (53%)
Frame = -3
Query: 1884 KTLLFAFLPSCQLVGECYRLRKH*SL*YVVLDFGDL*KLLLVVMR*SWVCFCSLLLPFWL 1943
KT FA SCQ G C L K SL FG L L M+ W CF S L W
Sbjct: 529 KT**FAS*QSCQQAGGCC*LHKLASLSLKREGFGGLFAHLHGDMKS*WACFSSHQLLSWH 350
Query: 1944 GFLLFQNFKPECCSTKRSAEVCKFLVFLEDRGRSA 1978
G LFQNFK EC STK S EVC+FLVFL D+ +A
Sbjct: 349 GSHLFQNFKQECFSTKLSVEVCRFLVFLVDKKETA 245
>BP065754
Length = 319
Score = 50.4 bits (119), Expect = 3e-06
Identities = 27/66 (40%), Positives = 42/66 (62%), Gaps = 3/66 (4%)
Frame = +2
Query: 38 VPSSLV---EIAPILRVANEVEKTHPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALL 94
VPS+L +I ILRVA+E++ P V+ + +A+ + LDP S GRGV QFKT L+
Sbjct: 119 VPSALAKNRDIDEILRVADEIQDDDPTVSRILCEHAYSLSQNLDPNSEGRGVLQFKTGLM 298
Query: 95 QRLERE 100
++++
Sbjct: 299 SVIKQK 316
>BP033918
Length = 512
Score = 37.0 bits (84), Expect = 0.030
Identities = 30/77 (38%), Positives = 33/77 (41%)
Frame = -1
Query: 1894 CQLVGECYRLRKH*SL*YVVLDFGDL*KLLLVVMR*SWVCFCSLLLPFWLGFLLFQNFKP 1953
C G +R KH VL+ G *KL M W P+W G LFQN K
Sbjct: 479 CLQHGHLFR*HKHADHW*RVLECGVQ*KL*QGAMNT*WEWLFLHQWPYWHGSHLFQNSKR 300
Query: 1954 ECCSTKRSAEVCKFLVF 1970
C STK SAE K F
Sbjct: 299 GCYSTKHSAEGFKSSAF 249
>TC11175 weakly similar to GB|AAL06796.1|15809736|AY054135
AT3g60690/T4C21_100 {Arabidopsis thaliana;}, partial
(42%)
Length = 692
Score = 32.0 bits (71), Expect = 0.97
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Frame = +1
Query: 330 LLIWGEAANLRFMPECLCYIYHHMAFELYGMLAGNVSPMTGENIKPAYGGEDEAFLRKVV 389
LL WG L L + HH + Y L N+ P + P Y GE++ L +++
Sbjct: 34 LLKWGR--KLTACATSLLTVRHHGSG--YAQLGSNLDPKVPKGHLPVYVGEEDGELHRLL 201
Query: 390 TPI----YNVIAELKKAKGEGQSIHNGGTMMI 417
P+ + + EL K + H+ G + I
Sbjct: 202 VPVIYFNHPLFGELLKETEDEFGFHHPGGITI 297
>TC15945 similar to UP|ANTA_GENTR (Q9ZWR8) Anthocyanin 5-aromatic
acyltransferase (5AT) , partial (5%)
Length = 923
Score = 32.0 bits (71), Expect = 0.97
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 1930 SWVCFCSLLLPFWLGFLLFQNFKPECCSTKRSAEVCKFLVFLEDRGRSAL 1979
++V CSL+ W+ + + K + C K S E+C FL + RGR L
Sbjct: 52 TFVVACSLV---WVSMIKLEQRKGDYCVAKGSDELCYFLFLADCRGRPEL 192
>BP065061
Length = 302
Score = 31.2 bits (69), Expect = 1.7
Identities = 27/82 (32%), Positives = 38/82 (45%), Gaps = 6/82 (7%)
Frame = -2
Query: 1545 ILLQLDFISALL*LFSLYTYFSMVASILFSVALKKG*VHKKPFETISLFKWLLLLSHSFK 1604
++LQ +S + LF L + + S+L +V + V F LF WLL LS SF
Sbjct: 262 LILQAGHVSTMKILFCLQ---AALGSLLLTVLASR--VQPLCF-CCCLFXWLLCLSFSFL 101
Query: 1605 LGF------*WPCPC*WKLAWK 1620
F *W C C + L W+
Sbjct: 100 XCFSLCSYL*WSCSCLFLLTWE 35
>TC8780
Length = 713
Score = 30.4 bits (67), Expect = 2.8
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +2
Query: 1685 IREVTLS--RVLSSWYYLLYTKFLVIHTEVLLH 1715
IREV +S R LS W Y+L++ F V+ + + LH
Sbjct: 38 IREVIISYHRFLSFWMYILHSSFAVVLSRLSLH 136
>TC12583 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (PP2C) ,
partial (23%)
Length = 277
Score = 29.6 bits (65), Expect = 4.8
Identities = 13/29 (44%), Positives = 14/29 (47%)
Frame = +1
Query: 741 SNYSGILYGYPNLVCNILNIIWWDLWCIP 769
S Y + Y PN C IL W DLW P
Sbjct: 106 SGYQTVAYERPNCFCWILLFGWCDLWWCP 192
>BP058134
Length = 545
Score = 29.6 bits (65), Expect = 4.8
Identities = 11/29 (37%), Positives = 21/29 (71%)
Frame = +3
Query: 1923 LLVVMR*SWVCFCSLLLPFWLGFLLFQNF 1951
+L++++ +W+C+C LL WL F+ F +F
Sbjct: 171 ILILIQHTWLCYC-FLLHLWLPFISFFSF 254
>TC17411 similar to UP|Q8LDG6 (Q8LDG6) Protein kinase, partial (33%)
Length = 632
Score = 29.6 bits (65), Expect = 4.8
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 102 DPTLKGRVKKSDAREMQSFYQHYYKKYIQALQNAADKADRAQLTKAYQTANVLFE 156
D ++ V + A + F +++YK Y+Q LQ+ D+ R L + Q + V E
Sbjct: 152 DVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKDR--RRALQRKVQESQVSAE 310
>TC11531 similar to AAQ56832 (AAQ56832) At2g34040, partial (32%)
Length = 535
Score = 29.3 bits (64), Expect = 6.3
Identities = 16/53 (30%), Positives = 25/53 (46%), Gaps = 9/53 (16%)
Frame = +1
Query: 334 GEAANLRFMPECLCYIYHHMAFEL---------YGMLAGNVSPMTGENIKPAY 377
GE N ++ ECL Y +HH+A ++ Y ++ G S GE+ Y
Sbjct: 310 GEEMNFTYV-ECLLYAFHHLAHKVPNATNSLCGYKIVTGQPSDRLGEDFSEQY 465
>BP069580
Length = 483
Score = 28.9 bits (63), Expect = 8.2
Identities = 19/56 (33%), Positives = 30/56 (52%), Gaps = 2/56 (3%)
Frame = -2
Query: 288 VMKKLFKNYKKWCK--YLDRKSSLWLPTIQQEVQQRKLLYMGLYLLIWGEAANLRF 341
+++ F WCK +L SS+ + +Q++V RKL++ LLIWG L F
Sbjct: 338 IVEVFFNKQALWCK*HFLFTMSSI-IQELQEDVVCRKLVH----LLIWGHTI*LEF 186
>TC11220 similar to UP|Q96259 (Q96259) AR401, partial (37%)
Length = 536
Score = 28.9 bits (63), Expect = 8.2
Identities = 19/53 (35%), Positives = 25/53 (46%), Gaps = 7/53 (13%)
Frame = +3
Query: 213 AVYALRNTRGLPWPNDYKKKKDEDILDWLGSMFGFQKH-------NVANQREH 258
A AL N LP P+DY K+E + + S GFQ + + N REH
Sbjct: 222 AAEALSNAN-LPPPSDYSSDKEEPDAEAVASRLGFQSYWDAAYSDELTNFREH 377
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.348 0.154 0.546
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,096,126
Number of Sequences: 28460
Number of extensions: 655430
Number of successful extensions: 6966
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 6645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6948
length of query: 1982
length of database: 4,897,600
effective HSP length: 104
effective length of query: 1878
effective length of database: 1,937,760
effective search space: 3639113280
effective search space used: 3639113280
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 14 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.8 bits)
S2: 62 (28.5 bits)
Medicago: description of AC122723.7