BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122722.3 - phase: 0
(1085 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AV779547 174 9e-44
TC12566 similar to UP|Q84XI1 (Q84XI1) RCa1 (Fragment), partial (... 167 1e-41
AV409408 129 3e-30
AV406755 127 1e-29
CB828263 124 1e-28
TC13186 weakly similar to UP|Q8W2C0 (Q8W2C0) Functional candidat... 113 2e-25
BP057104 111 7e-25
BP045440 105 4e-23
TC19146 similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-contain... 103 1e-22
BP065014 94 9e-20
AV410283 87 1e-17
BP065724 80 1e-15
AV419023 74 9e-14
TC18755 similar to UP|AAN85378 (AAN85378) Resistance protein (Fr... 66 3e-11
TC18765 weakly similar to UP|Q9LVT1 (Q9LVT1) Disease resistance ... 65 6e-11
TC15876 weakly similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-... 63 2e-10
BP064315 62 4e-10
TC9932 weakly similar to UP|Q93YA7 (Q93YA7) Resistance gene-like... 60 1e-09
TC12516 similar to UP|Q9M5V7 (Q9M5V7) Disease resistance-like pr... 55 6e-08
TC20188 weakly similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-... 52 7e-07
>AV779547
Length = 556
Score = 174 bits (440), Expect = 9e-44
Identities = 86/145 (59%), Positives = 107/145 (73%)
Frame = +1
Query: 52 VTFRGEDTRNNFTDFLFDALETKGIMVFRDVINLQKGECIGPELFRAIEISQVYVAIFSK 111
V+FRGEDTRNNFTD L AL KG + F+D L+KG+ I EL +AIE SQ+ + +FSK
Sbjct: 109 VSFRGEDTRNNFTDHLLGALYGKGFVTFKDDTMLRKGKNISTELIQAIEGSQILIVVFSK 288
Query: 112 NYASSTWCLQELEKICECIKGSGKHVLPVFYDVDPSEVRKQSGIYSEAFVKHEQRFQQDS 171
YASSTWCLQEL KI + I G + VLPV DV PSEVRKQSG Y EAF+KHE+RF++D
Sbjct: 289 YYASSTWCLQELAKIADGIVGKRQTVLPVVCDVTPSEVRKQSGNYGEAFLKHEERFKEDL 468
Query: 172 MKVSRWREALEQVGSISGWDLRDEP 196
V RWR+AL +V +SGWD+ ++P
Sbjct: 469 EMVQRWRKALAEVADLSGWDVTNKP 543
>TC12566 similar to UP|Q84XI1 (Q84XI1) RCa1 (Fragment), partial (28%)
Length = 918
Score = 167 bits (422), Expect = 1e-41
Identities = 98/244 (40%), Positives = 149/244 (60%), Gaps = 6/244 (2%)
Frame = +1
Query: 375 DVVYKVSLLDWNEAHMLFCRKAFKDEKIIMSNYQNLVDQILHYAKGLPLAIKVLGSFLFG 434
D +Y+V + + ++ LF AFK + Y +L ++L YAKG+PLA+KVLG FL+G
Sbjct: 4 DEIYEVKEMSFEDSLQLFSLNAFKRNDPL-ETYIDLSKKLLSYAKGIPLALKVLGLFLYG 180
Query: 435 RNVTEWKSALTRLRQSPVKDVMDVLQLSFDGLNETEKDIFLHIACFFNNDSEEDVKNILN 494
R W+S L +L + P ++++VL+LS+DGL++ +KDIFL IACF+ EE V L+
Sbjct: 181 RERKAWESQLVKLEKLPDPEIINVLKLSYDGLDDDQKDIFLDIACFYLGHLEESVAQTLD 360
Query: 495 CCGFHADIGLRVLIDKSLVSISYSIINMHSLLEELGRKIVQNSSSKEPRKWSRLWSTEQL 554
CGF ADIG+ VL D+ L+SI I MH L+E +G++IV+ +P K SRLW+ +Q
Sbjct: 361 SCGFFADIGMEVLKDRCLISILEGRIVMHDLIEVMGKEIVRQQCPNDPGKRSRLWNDDQT 540
Query: 555 YDVMLENM-EKHVEAIVLYYKEDEEADF--EHLSKMSNLRLL-FIANYISTML--GFPSC 608
YDV+ +N ++ I LY + + E M+NLR+L F + + ++ PSC
Sbjct: 541 YDVLGKNKGTDAIQCIFLYTCPIKIVNLHAETFKYMTNLRMLQFYKSRVCSLALECDPSC 720
Query: 609 LSNK 612
+S K
Sbjct: 721 ISWK 732
>AV409408
Length = 430
Score = 129 bits (323), Expect = 3e-30
Identities = 61/142 (42%), Positives = 95/142 (65%)
Frame = +2
Query: 420 GLPLAIKVLGSFLFGRNVTEWKSALTRLRQSPVKDVMDVLQLSFDGLNETEKDIFLHIAC 479
GLPLA++VLGSFL GR++++W+ AL ++++ P D+++ L++S+D L + K +FL IAC
Sbjct: 5 GLPLALEVLGSFLCGRSLSDWEDALIKIKKVPHDDILNKLRISYDMLEDEHKTLFLDIAC 184
Query: 480 FFNNDSEEDVKNILNCCGFHADIGLRVLIDKSLVSISYSIINMHSLLEELGRKIVQNSSS 539
FF + V +L CG H +G+ VLI+KSL++ +I MH LLEE+G+ V S
Sbjct: 185 FFKGWYKHKVIQLLGSCGLHPTVGINVLIEKSLLTFDGRVIGMHDLLEEMGKTEVFLESP 364
Query: 540 KEPRKWSRLWSTEQLYDVMLEN 561
+P + SRLWS E + V+ +N
Sbjct: 365 NDPGRRSRLWSLEDIDQVLRKN 430
>AV406755
Length = 425
Score = 127 bits (318), Expect = 1e-29
Identities = 63/115 (54%), Positives = 81/115 (69%)
Frame = +3
Query: 48 YDVFVTFRGEDTRNNFTDFLFDALETKGIMVFRDVINLQKGECIGPELFRAIEISQVYVA 107
YDVF++FRGE++R +FT L+ AL+ GI VF D LQ+GE I L +AIE S++ +
Sbjct: 84 YDVFLSFRGEESRRSFTSHLYTALKNAGIKVFMDN-ELQRGEDISSSLLKAIEDSRIAII 260
Query: 108 IFSKNYASSTWCLQELEKICECIKGSGKHVLPVFYDVDPSEVRKQSGIYSEAFVK 162
IFS NY S WCL ELEKI EC + G+ V+PVFY+VDPS++RKQ G EAF K
Sbjct: 261 IFSTNYTGSKWCLDELEKIIECQRTIGQEVMPVFYNVDPSDIRKQRGTVGEAFRK 425
>CB828263
Length = 570
Score = 124 bits (310), Expect = 1e-28
Identities = 62/130 (47%), Positives = 87/130 (66%), Gaps = 5/130 (3%)
Frame = +2
Query: 84 NLQKGECIGPELFRAIEISQVYVAIFSKNYASSTWCLQELEKICECIKGSGKHVLPVFYD 143
+LQ+G+ I L RAIE +++ V +FSKNY +S WCL EL KI EC + G+ VLPVFYD
Sbjct: 5 DLQRGDEISSSLLRAIEEAKLSVIVFSKNYGNSKWCLDELVKILECKRTRGQIVLPVFYD 184
Query: 144 VDPSEVRKQSGIYSEAFVKHEQRFQQDSMKVSRWREALEQVGSISGWD-----LRDEPLA 198
+DPS VR Q+G Y+EAFVKH Q KV +WREAL + ++SGWD + E +
Sbjct: 185 IDPSHVRNQTGTYAEAFVKHGQ-----VDKVQKWREALREAANLSGWDCSVNRMESEVIE 349
Query: 199 REIKEIVQKI 208
+ K++++K+
Sbjct: 350 KIAKDVLEKL 379
>TC13186 weakly similar to UP|Q8W2C0 (Q8W2C0) Functional candidate
resistance protein KR1, partial (6%)
Length = 586
Score = 113 bits (282), Expect = 2e-25
Identities = 59/143 (41%), Positives = 87/143 (60%)
Frame = +1
Query: 48 YDVFVTFRGEDTRNNFTDFLFDALETKGIMVFRDVINLQKGECIGPELFRAIEISQVYVA 107
YDVF++ DTR F+ L+ AL KGI+ F D + + + +AIE S++ +
Sbjct: 103 YDVFISLITSDTRFGFSGDLYTALSDKGILTFIDDGLPRPDDIMSTVNSKAIESSRIAIV 282
Query: 108 IFSKNYASSTWCLQELEKICECIKGSGKHVLPVFYDVDPSEVRKQSGIYSEAFVKHEQRF 167
+ S+NYASS++CL EL I + + G + PVFY V+PS+VR Q G + +AF HE+RF
Sbjct: 283 VISENYASSSFCLDELMYILKRREEKGLLIWPVFYQVEPSDVRYQKGGFGKAFASHEERF 462
Query: 168 QQDSMKVSRWREALEQVGSISGW 190
DS KV +WR AL+QV + +
Sbjct: 463 GSDSAKVRKWRNALKQVADLKAF 531
>BP057104
Length = 496
Score = 111 bits (277), Expect = 7e-25
Identities = 60/118 (50%), Positives = 75/118 (62%), Gaps = 1/118 (0%)
Frame = -3
Query: 785 MLPSLHSLCCLRKVDISFCYLSHVPDAIECLHWLERLNLAGNDFVTL-PSLRKLSKLVYL 843
+LP L CL+ +D+SFC L VPDAI LH LE L+L GN+F++L PS+++LSKL L
Sbjct: 341 LLPDLPHFSCLQHLDLSFCNLRQVPDAIGWLHSLEDLDLGGNNFISLPPSIKELSKLRVL 162
Query: 844 NLEHCKLLESLPQLPFPTNTGEVHREYDDYFCGAGLLIFNCPKLGEREHCRSMTLLWM 901
NLEHCK L P+LP T V R + AGL IFNCPKL EHC ++ WM
Sbjct: 161 NLEHCKQLRYFPELPSRTQGWVVRRPH------AGLYIFNCPKLRVIEHCYNVVFSWM 6
Score = 37.7 bits (86), Expect = 0.010
Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = -3
Query: 642 ESNIKQLWKNKKYLPNLRTLDLRHSRNLEKIID-FGEFPNLERLDLEGCINLVELDPSIG 700
E +I L + + L+ LDL NL ++ D G +LE LDL G N + L PSI
Sbjct: 359 EDSIGLLLPDLPHFSCLQHLDLSFC-NLRQVPDAIGWLHSLEDLDLGGN-NFISLPPSIK 186
Query: 701 LLRKLVYLNLKDCKSLVSIP 720
L KL LNL+ CK L P
Sbjct: 185 ELSKLRVLNLEHCKQLRYFP 126
>BP045440
Length = 535
Score = 105 bits (262), Expect = 4e-23
Identities = 62/156 (39%), Positives = 92/156 (58%), Gaps = 2/156 (1%)
Frame = -3
Query: 48 YDVFVTFRGEDTRNNFTDFLFDALETKGIMVFRDVINLQKGECIGPELFRAIEISQVYVA 107
Y +F++FRG DTR++FT L+ L +G + F+D +L+ G I +L IE S+ +
Sbjct: 527 YQIFISFRGMDTRDDFTKPLYQGLCREGFVTFKDDESLEGGSPI-EKLLDDIEESRFAII 351
Query: 108 IFSKNYASSTWCLQELEKICECIKGSGKH--VLPVFYDVDPSEVRKQSGIYSEAFVKHEQ 165
I SKNYA S WCL+EL KI EC GK+ VLP +V P+EVR Y++A KHE+
Sbjct: 350 ILSKNYAESEWCLKELSKILECKDQEGKNQLVLPSSTEVTPTEVRHVINRYADAMAKHEK 171
Query: 166 RFQQDSMKVSRWREALEQVGSISGWDLRDEPLAREI 201
DS + W++AL V +++G++ + R I
Sbjct: 170 N-GIDSKTIQAWKKALFDVCTLTGFEKPSDWYVRSI 66
>TC19146 similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-containing protein
TSDC, partial (12%)
Length = 701
Score = 103 bits (257), Expect = 1e-22
Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 1/146 (0%)
Frame = +1
Query: 67 LFDALETKGIMVFRDVINLQKGECIGPELFRAIEISQVYVAIFSKNYASSTWCLQELEKI 126
L+ AL +G F D L G I L A E S++ + +FS+NY S+WCL EL KI
Sbjct: 1 LYHALRREGFKTFMDDEGLVGGNEIAKSLLDASEKSRLSIIVFSENYGYSSWCLDELVKI 180
Query: 127 CECIKGSGKHVLPVFYDVDPSEVRKQSGIYSEAFVKHEQRFQQDSMKVSRWREALEQVGS 186
EC++ + V P+FY V+ S+V Q Y A + HE+ + +DS +V +WR AL +
Sbjct: 181 VECMETKKQLVWPIFYKVEKSDVTSQENSYEHAMIGHEKNYGKDSDEVKKWRSALSAMAK 360
Query: 187 ISGWDLRDEPLARE-IKEIVQKIINI 211
+ G ++++ E IK+IV+K I I
Sbjct: 361 LEGHNVKENKYEYEFIKKIVEKAIAI 438
>BP065014
Length = 498
Score = 94.4 bits (233), Expect = 9e-20
Identities = 46/111 (41%), Positives = 68/111 (60%)
Frame = -2
Query: 79 FRDVINLQKGECIGPELFRAIEISQVYVAIFSKNYASSTWCLQELEKICECIKGSGKHVL 138
F+D ++L+ G I EL AIE S+V + + S+N+A S WCL+EL KI +C K VL
Sbjct: 497 FKDDLSLEDGAPI-EELLGAIEESRVAIVVLSENFADSKWCLKELVKILDCRKKKKPLVL 321
Query: 139 PVFYDVDPSEVRKQSGIYSEAFVKHEQRFQQDSMKVSRWREALEQVGSISG 189
P+FY V+P+ +R G Y EA +HE++ +DS V W +AL + + G
Sbjct: 320 PIFYKVEPTNIRHLKGRYGEAMAEHEKKLGKDSQTVREWTQALSDISYLKG 168
>AV410283
Length = 426
Score = 87.4 bits (215), Expect = 1e-17
Identities = 47/119 (39%), Positives = 75/119 (62%)
Frame = +1
Query: 321 IQRKLCHERTLMILDNVDQVEQLEKIAVHREWLGPGSRIIIISRDEHVLKAYGVDVVYKV 380
I+R L + L+ILD+VD+++QL+ + +REW GSR++I +R+ VL VD+ Y+V
Sbjct: 70 IKRVLQGNKVLLILDDVDEIQQLDFLMGNREWFHKGSRVVITTRNTQVLPESYVDMFYEV 249
Query: 381 SLLDWNEAHMLFCRKAFKDEKIIMSNYQNLVDQILHYAKGLPLAIKVLGSFLFGRNVTE 439
L+ + A LFC A + +K + NL QI+ GLPLA++V+GSFLF + ++
Sbjct: 250 RELELSAALALFCHHAMRRKK-PAEGFSNLSKQIVKKTGGLPLALEVIGSFLFDKRTSK 423
>BP065724
Length = 495
Score = 80.5 bits (197), Expect = 1e-15
Identities = 35/82 (42%), Positives = 54/82 (65%)
Frame = -1
Query: 113 YASSTWCLQELEKICECIKGSGKHVLPVFYDVDPSEVRKQSGIYSEAFVKHEQRFQQDSM 172
YA S+WCL+E+ KI EC + + + V P+FY V+PS+VR Q Y +A +K E R+ +DS
Sbjct: 495 YADSSWCLEEVVKILECKQKNDQLVWPIFYKVEPSDVRHQRNSYEKAMIKQETRYGKDSE 316
Query: 173 KVSRWREALEQVGSISGWDLRD 194
KV +WR +L QV + + ++
Sbjct: 315 KVKKWRSSLSQVCDLKAFHYKE 250
>AV419023
Length = 410
Score = 74.3 bits (181), Expect = 9e-14
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Frame = +3
Query: 795 LRKVDISFCYLSHVPDAIECLHWLERLNLAGNDFVTLPS-LRKLSKLVYLNLEHCKLLES 853
L +D+SFC + VP+AI L LERLNL GN+FV LPS + +L +L YLNL HC L
Sbjct: 3 LVSLDLSFCSILEVPNAIGRLWCLERLNLQGNNFVELPSTISRLRRLAYLNLSHCIKLGD 182
Query: 854 LPQLP---FPTNTGEVHREYDDYFCGAGLLIFNCPKLGER 890
LP LP P + +GL IFNCP +G++
Sbjct: 183 LPLLPSECAPLGGRYYETTSESRDHRSGLYIFNCPIVGKK 302
Score = 40.8 bits (94), Expect = 0.001
Identities = 28/63 (44%), Positives = 34/63 (53%)
Frame = +3
Query: 658 LRTLDLRHSRNLEKIIDFGEFPNLERLDLEGCINLVELDPSIGLLRKLVYLNLKDCKSLV 717
L +LDL LE G LERL+L+G N VEL +I LR+L YLNL C L
Sbjct: 3 LVSLDLSFCSILEVPNAIGRLWCLERLNLQGN-NFVELPSTISRLRRLAYLNLSHCIKLG 179
Query: 718 SIP 720
+P
Sbjct: 180 DLP 188
>TC18755 similar to UP|AAN85378 (AAN85378) Resistance protein (Fragment),
complete
Length = 880
Score = 66.2 bits (160), Expect = 3e-11
Identities = 68/232 (29%), Positives = 107/232 (45%), Gaps = 13/232 (5%)
Frame = +3
Query: 222 DLVGIDSPIQALQNHLLLNSVDGVRAIGICGMGGIGKTTLATTLYGQ--ISHQFSASCFI 279
DLVGID + L L+ + I + GMGG+GKTTL +Y + F A +I
Sbjct: 192 DLVGIDRRKKKLMG-CLIKPCPVRKVISVTGMGGMGKTTLVKQVYDDPVVIKHFRACAWI 368
Query: 280 DDVTKIYGLHDDPLDVQKQILFQ-----TLGIEHQQICNRYHATTLIQRKLCHERTLMIL 334
V++ + + D+ +Q+ + LG+E+ + C+R +I+ L R L++
Sbjct: 369 -TVSQSCEIGELLRDLARQLFSEIRRPVPLGLENMR-CDR--LKMIIKDLLQRRRYLVVF 536
Query: 335 DNVDQVEQLEKIAVHREWLGPGSRIIIISRDEHVLKAYGVD---VVYKVSLLDWNEAHML 391
D+V V + E + GSRI+I +R + + VY + L +EA L
Sbjct: 537 DDVWHVREWEAVKYALPDNNCGSRIMITTRRSDLAFTSSTESKGKVYNLQPLKEDEAWEL 716
Query: 392 FCRKAFKDEKIIMSNYQNLVDQILHYAKGLPLAIKVLGSFLF---GRNVTEW 440
FCRK F + S+ + IL +GLPLAI + L R + EW
Sbjct: 717 FCRKTFHGDS-CPSHLIGICTYILRKCEGLPLAIVAISGVLATKDKRRIDEW 869
>TC18765 weakly similar to UP|Q9LVT1 (Q9LVT1) Disease resistance
protein-like, partial (18%)
Length = 688
Score = 65.1 bits (157), Expect = 6e-11
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Frame = +2
Query: 331 LMILDNVDQVEQLEKIAVHREWLGPGSRIIIISRDEHVLKAYGV-DVVYKVSLLDWNEAH 389
L++LD+V + LE++ + PG + +++SR K + + Y V LL +A
Sbjct: 215 LVVLDDVWSLPVLEQLVLRV----PGCKYLVVSR----FKFQRIFNDTYDVELLSEGDAL 370
Query: 390 MLFCRKAFKDEKIIMSNYQNLVDQILHYAKGLPLAIKVLGSFLFGRNVTEWKSALTRLRQ 449
LFC AF + I QNL+ Q++ LPLA+KV+G+ L +N W S TRL Q
Sbjct: 371 SLFCHHAFGHKSIPFGANQNLIKQVVAECGRLPLALKVIGASLRDQNEMFWLSVKTRLSQ 550
Query: 450 ------SPVKDVMDVLQLSFDGLNETEKDIFLHIACF 480
S +++D + +S + L E K+ FL + F
Sbjct: 551 GLSIGESYEVNLIDRMAISTNYLPEKVKECFLDLCAF 661
>TC15876 weakly similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-containing
protein TSDC, partial (13%)
Length = 558
Score = 63.2 bits (152), Expect = 2e-10
Identities = 31/88 (35%), Positives = 52/88 (58%), Gaps = 2/88 (2%)
Frame = +1
Query: 126 ICECIKGSGKHVLPVFYDVDPSEVRKQSGIYSEAFVKHEQRFQQDSMKVSRWREALEQVG 185
I EC + + + V P+FY V+PS+VR Q Y +A +K E R+ +DS KV +WR +L QV
Sbjct: 16 ILECXQKNDQLVWPIFYKVEPSDVRHQRNSYEKAMIKPETRYGKDSEKVKKWRSSLSQVC 195
Query: 186 SISGWDLRDEPLARE--IKEIVQKIINI 211
+ + ++ I +I++ ++NI
Sbjct: 196 DLKAFHYKENSGYERAFIPDIIKDVMNI 279
>BP064315
Length = 350
Score = 62.4 bits (150), Expect = 4e-10
Identities = 33/81 (40%), Positives = 55/81 (67%), Gaps = 4/81 (4%)
Frame = +1
Query: 321 IQRKLCHERTLMILDNVDQVEQLEKIAVHREWLGPGSRIIIISRDEHVLKAYGVDVV--- 377
I+R+L ++R L++LD+VD+++QL+ +A +W G GSRIII +RD +L + +D V
Sbjct: 55 IKRRLSNKRVLLVLDDVDKIKQLQALAGGGDWFGSGSRIIITTRDTTMLDKHKMDDVIMK 234
Query: 378 -YKVSLLDWNEAHMLFCRKAF 397
YK+ L+ +++ LFC AF
Sbjct: 235 KYKMEELNDHDSLELFCWHAF 297
>TC9932 weakly similar to UP|Q93YA7 (Q93YA7) Resistance gene-like, partial
(5%)
Length = 689
Score = 60.5 bits (145), Expect = 1e-09
Identities = 39/107 (36%), Positives = 58/107 (53%), Gaps = 7/107 (6%)
Frame = -2
Query: 3 SRCHILTKKKKKSRYHIQSSKH----LYIQMASSSKSSSALVTSSKKNH---YDVFVTFR 55
SR +IL K K + I + + L SS + ++SS NH YDVF+ FR
Sbjct: 358 SRNYILHKTKGVLPFSISALSNSKG*LDFNSFSSFHQNHISMSSSSSNHQWIYDVFINFR 179
Query: 56 GEDTRNNFTDFLFDALETKGIMVFRDVINLQKGECIGPELFRAIEIS 102
G+DTR++F L+ AL G+ VF D NL++G + PEL + I ++
Sbjct: 178 GKDTRHSFVSHLYTALSNAGVNVFLDDENLERGLELEPELQKLINLN 38
>TC12516 similar to UP|Q9M5V7 (Q9M5V7) Disease resistance-like protein
(Fragment), partial (36%)
Length = 859
Score = 55.1 bits (131), Expect = 6e-08
Identities = 28/63 (44%), Positives = 40/63 (63%)
Frame = +3
Query: 220 SKDLVGIDSPIQALQNHLLLNSVDGVRAIGICGMGGIGKTTLATTLYGQISHQFSASCFI 279
+K+L+G+D I L++ L S D VR IGI GMGGIGKTT+A ++ + Q+ CF+
Sbjct: 537 TKELIGVDKSIAHLESLLCQESKD-VRVIGIWGMGGIGKTTIAEEIFNRRHSQYEGICFL 713
Query: 280 DDV 282
V
Sbjct: 714 SKV 722
>TC20188 weakly similar to UP|Q8S4X3 (Q8S4X3) TIR-similar-domain-containing
protein TSDC, partial (11%)
Length = 494
Score = 51.6 bits (122), Expect = 7e-07
Identities = 25/76 (32%), Positives = 45/76 (58%), Gaps = 1/76 (1%)
Frame = +1
Query: 137 VLPVFYDVDPSEVRKQSGIYSEAFVKHEQRFQQDSMKVSRWREALEQVGSISGWDL-RDE 195
V P+FY++ S+V Q+ Y A + HE F +DS KV +W+ AL ++ + G + +E
Sbjct: 10 VWPIFYEISXSDVSNQTKSYGHAMLAHENSFGKDSEKVQKWKSALSEMAFLQGEHITENE 189
Query: 196 PLAREIKEIVQKIINI 211
+ I++IV+K + +
Sbjct: 190 YEYKLIQKIVEKALAV 237
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.322 0.138 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,387,622
Number of Sequences: 28460
Number of extensions: 325862
Number of successful extensions: 1796
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 1753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1782
length of query: 1085
length of database: 4,897,600
effective HSP length: 100
effective length of query: 985
effective length of database: 2,051,600
effective search space: 2020826000
effective search space used: 2020826000
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Medicago: description of AC122722.3