BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122166.6 - phase: 0 /pseudo
(1091 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AV767121 154 7e-38
TC18710 133 1e-31
AV780221 121 7e-28
TC13572 90 3e-20
BP056651 59 4e-18
TC18198 weakly similar to UP|Q9XGZ5 (Q9XGZ5) T1N24.20 protein, p... 81 8e-16
AV780705 80 2e-15
BP041113 79 3e-15
AV428268 64 1e-10
AV412895 62 5e-10
BP060613 60 1e-09
BP056597 57 2e-08
TC19704 weakly similar to UP|Q9SZ87 (Q9SZ87) RNA-directed DNA po... 53 2e-07
TC18742 similar to UP|Q9FZG5 (Q9FZG5) T2E6.4, partial (3%) 52 5e-07
AV414139 51 1e-06
AV411435 45 5e-05
AU089037 43 2e-04
TC12829 43 3e-04
CN825682 42 5e-04
CN825238 40 0.002
>AV767121
Length = 525
Score = 154 bits (389), Expect = 7e-38
Identities = 80/185 (43%), Positives = 111/185 (59%)
Frame = +2
Query: 720 LSGWQSRFLSFGGRLVLLKFVLTALPVYALSFFKAPSGIISSIESLFNKFFWGGGEDKRK 779
LS W+ + +SFGGR+ L++ VLTALP++ LSFFK P G+ S L F WGG E++ K
Sbjct: 2 LSKWKQKTVSFGGRIFLIQSVLTALPLFFLSFFKLPIGVGKSCVRLMRNFLWGGSENENK 181
Query: 780 ISWIRWDTLSLRKEYGGLGVTRLREFNLALLGKWCWRLLLEKEALWRKVLVARYGVADGG 839
I+ ++W + KE GGLG+ L FN ALLGK WR L E ++LWR+V+ A+
Sbjct: 182 IA*VKWTDVCKPKELGGLGIKDLFTFNKALLGK*RWRYLTEPDSLWRRVIEAQ------- 340
Query: 840 LEDGGRSCSSWWREIVRIRDGIGEGGEGWFGSCVRRRVGDGAETDFWWDCWCGDVSLCER 899
D SSWW +I+ + E +GWF S +++ VG+G +T FW + W G L R
Sbjct: 341 -PDHYSCGSSWWNDILSL---CPEDADGWFSSGLKKLVGEGDQTKFWSEDWLGSGLLSAR 508
Query: 900 FSRLY 904
F RLY
Sbjct: 509 FRRLY 523
>TC18710
Length = 843
Score = 133 bits (335), Expect = 1e-31
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 3/216 (1%)
Frame = +2
Query: 394 GPDGINLGFIKSFWHEMKAEIVRFVTEFHRNRKLSKGINSRFIALIPKVASPQSLNEFRP 453
G DG+N F + +K + + F ++ IN + LIPKV P+S+N+FRP
Sbjct: 188 GMDGMNGLFYQKNGDVVKDSVT*AILAFLERAEIPNEINETLVTLIPKVPHPESINQFRP 367
Query: 454 ISLVGSLYKILAKILANRLRQVIGSVVSEVQSAFVKNRQILDGILITNE---VVDEARKS 510
IS LYK+++KI RL+ + ++S +QS F++ RQI D +LI E ++
Sbjct: 368 ISGCTFLYKVISKIFVARLKDAMPDLISPMQSGFIQGRQIQDNLLIVQEAFHAINRPGAL 547
Query: 511 KKDLLLFKVDFEKAYDSVDWGYLDEVMGSMTFPTVW*KWIKECVGTATASVLVNGCPTDE 570
++ + K+D KAYD V+W +L+ + + F T W K I V + + +NG +
Sbjct: 548 GRNHSIIKLDMNKAYDRVEWKFLESSLLAFGFSTNWVKMIMILVSGVSYNYKINGVVGPK 727
Query: 571 FFLERGLRQGDPLSPFLFLLAAEGLNVLMKALVDAG 606
+RGLRQGDP SP+LFL E L++L++ + G
Sbjct: 728 LLPQRGLRQGDPFSPYLFLFTMEVLSLLIQNSFNMG 835
>AV780221
Length = 461
Score = 121 bits (303), Expect = 7e-28
Identities = 65/160 (40%), Positives = 94/160 (58%), Gaps = 1/160 (0%)
Frame = +3
Query: 734 LVLLKFVLTALPVYALSFFKAPSG-IISSIESLFNKFFWGGGEDKRKISWIRWDTLSLRK 792
L L++ VL ALP++ L FFK P+G +++ + + FF E +KI+W++W T+ K
Sbjct: 3 LCLIRSVLIALPLFHLPFFKLPTGGFYTNVNN**DPFFGREVEGGKKIAWVKWSTVCRPK 182
Query: 793 EYGGLGVTRLREFNLALLGKWCWRLLLEKEALWRKVLVARYGVADGGLEDGGRSCSSWWR 852
+ GGLGV L FN ALLGKW WR+L E++ LW KVL+ +Y A +S SSWW
Sbjct: 183 DEGGLGVQNLGLFNKALLGKWRWRMLKERDGLWYKVLLIKYKNAI------PQSASSWWN 344
Query: 853 EIVRIRDGIGEGGEGWFGSCVRRRVGDGAETDFWWDCWCG 892
++ +GG GW + RR+G+G E FW + W G
Sbjct: 345 DL--HSTCFEDGGGGWMQRGLCRRIGEGTEVKFWNENWLG 458
>TC13572
Length = 534
Score = 89.7 bits (221), Expect(2) = 3e-20
Identities = 56/165 (33%), Positives = 81/165 (48%), Gaps = 1/165 (0%)
Frame = -3
Query: 825 WRKVLVARYGVADGGLEDGGRSCSSWWREIVRIRDGIGEGGEGWFGSCVRRRVGDGAETD 884
W +V++A+YG DGG + SSWWR++ G G GWF V + + G T
Sbjct: 478 WCRVVLAKYG--DGGCTN----ISSWWRDV----QTAGGGENGWFEEGVHKVLRSGNHTR 329
Query: 885 FWWDCWCGDVSLCERFSRLYDLTVNKLISVRNMILLGVDVGGEALRWRRRLWAWEEELVE 944
FW + W G L E++ RLY+L+ K S+ V RWRR L E + ++
Sbjct: 328 FWLENWTGVGILREKYYRLYNLSKLKWASIDECGGWSQGVWNWDFRWRRPLAGRELDWLQ 149
Query: 945 EFXALLLTVSLQESVTDRWIWLPTQDDGYSVRGAYDML-TSQEQP 988
++ V L V D+W+W P++D YSV A+ L EQP
Sbjct: 148 ALSLDIVRVPLLAGVPDKWVWKPSEDGSYSVNSAFIFLQVPSEQP 14
Score = 26.6 bits (57), Expect(2) = 3e-20
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1
Query: 806 NLALLGKWCWRL 817
N ALLGKW WRL
Sbjct: 534 NKALLGKWLWRL 499
>BP056651
Length = 564
Score = 59.3 bits (142), Expect(2) = 4e-18
Identities = 35/107 (32%), Positives = 51/107 (46%), Gaps = 2/107 (1%)
Frame = +1
Query: 6 GMVTIWDRVEVEVWSTVRGVHFLLIHGRFLKSNEEFYIFNMYAPCDRRAKQVLWNSLSSR 65
G++ +W V G FL + G++ I N+Y+PC R K+ LW L +
Sbjct: 112 GLLCVWKPSVFTVEECFLGEGFLGLKGKW--KGVSCVIINVYSPCSRGEKRQLWEDLKAL 285
Query: 66 LLSLGSSKVCVCGDFNTVRSVDERRSV--RGSQVVDDCAPFNDFIED 110
L C+ GDFN+VR +ERR GS + FNDFI++
Sbjct: 286 RRRLEEDIWCMAGDFNSVRRSEERRGTHGEGSSGAGEMEEFNDFIDE 426
Score = 50.1 bits (118), Expect(2) = 4e-18
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +3
Query: 113 LINLPLCGRKFTWYNGDGRSMSTLDRFLLSEEWCMVWPTCLQ 154
L ++PL GRK+TW +G++ S LDRFL+S +W W C Q
Sbjct: 432 LDDIPLVGRKYTWVRSNGKARSRLDRFLVSHQWNTSWXDCAQ 557
>TC18198 weakly similar to UP|Q9XGZ5 (Q9XGZ5) T1N24.20 protein, partial
(14%)
Length = 592
Score = 81.3 bits (199), Expect = 8e-16
Identities = 57/206 (27%), Positives = 101/206 (48%), Gaps = 14/206 (6%)
Frame = -3
Query: 290 RLNWLRDGDANSKFFHSVLAARRRINSLSSIL-VDGVVVEGVQPVRQAVFTHSKNHF--- 345
R+ L+ GD N++FFH+ RR N + I G+ VEG + V +A + + +
Sbjct: 590 RIK*LK*GDHNTRFFHASTIQRRDFNRILKIKDAHGIWVEGQKKVNEAAVNYFSDIYSSS 411
Query: 346 --------LAPI--MTRPSVGHLQFRKLSSVERGGLIKPFHEEEIKAAVWDCDSYKIPGP 395
LAPI + + H ++S+ +EIK AV+ K PG
Sbjct: 410 PLQYLRECLAPIPKLVTDRLNHKLCAQVST------------DEIKEAVFSMGDLKAPGM 267
Query: 396 DGINLGFIKSFWHEMKAEIVRFVTEFHRNRKLSKGINSRFIALIPKVASPQSLNEFRPIS 455
DGIN F + +K ++ + +F + +L +N + LIPK+ +++ +FRPIS
Sbjct: 266 DGINGLFYQQNREIVKNDVNNAILDFFDHGELPVELNETLVTLIPKIPHAEAIQQFRPIS 87
Query: 456 LVGSLYKILAKILANRLRQVIGSVVS 481
+YK+++KI+ RL+ + +++S
Sbjct: 86 CCSFIYKVISKIIVARLKPDMVNLIS 9
>AV780705
Length = 524
Score = 79.7 bits (195), Expect = 2e-15
Identities = 49/146 (33%), Positives = 75/146 (50%), Gaps = 3/146 (2%)
Frame = -2
Query: 691 PFLYLGLSI--GGDPRRLLFWEPVVNRIKNRLSGWQSRFLSFGGRLVLLKFVLTALPVYA 748
P YLGL G + L W + ++K +L GW+ L+ G+ VL+K ++ A+P YA
Sbjct: 493 PGHYLGLPAIWGRNKSHSLVW--IEEKVKEKLEGWKETLLNQAGKEVLIKAIIQAIPSYA 320
Query: 749 LSFFKAPSGIISSIESLFNKFFW-GGGEDKRKISWIRWDTLSLRKEYGGLGVTRLREFNL 807
++ P +S+ +L F+W GE + + L KE GG+G LR NL
Sbjct: 319 MTIVHFPKTFCNSLYALVADFWWKSQGEGAVEYTGAVGTK*PLSKEKGGVGFRDLRTQNL 140
Query: 808 ALLGKWCWRLLLEKEALWRKVLVARY 833
A L + WR+L EALW +V+ + Y
Sbjct: 139 AFLARQAWRVLTNPEALWVRVMKSLY 62
>BP041113
Length = 503
Score = 79.3 bits (194), Expect = 3e-15
Identities = 57/170 (33%), Positives = 73/170 (42%), Gaps = 1/170 (0%)
Frame = +1
Query: 885 FWWDCWCGDVSLCERFSRLYDLTVNKLISVRNMILLGVDVGGEALRWRRRLWAWEEELVE 944
FW + W G +L +R+ RL++L+ K + V L WRR L E +E
Sbjct: 1 FWTEDWIGMGTLRDRYYRLFNLSKEKRCCILECGGWNHGVWTWKLSWRRALVGRELGWLE 180
Query: 945 EFXALLLTVSLQESVTDRWIWLPTQDDGYSVRGAYDMLTSQEQPHLHQNLELIWHTQVPL 1004
L V L E V D+W+WLP Y+V AY L + IW T P
Sbjct: 181 LMMKDLSGVCLSEGVEDKWLWLP--GGTYTVNSAYSFLQAPTLADTDPIFATIWRTVAP- 351
Query: 1005 KVSILAWRLLRDRLPTKDNLANRGILPLEARMCVSSC-GNEEDVNHLFLS 1053
V AWR L RLPT DNL R ++ A C G E V HL +
Sbjct: 352 SVKAFAWRCLLGRLPTYDNLIKRQVVVDPAMTVCKFCQGEVESVTHLLFA 501
>AV428268
Length = 429
Score = 63.9 bits (154), Expect = 1e-10
Identities = 35/118 (29%), Positives = 55/118 (45%)
Frame = +3
Query: 973 YSVRGAYDMLTSQEQPHLHQNLELIWHTQVPLKVSILAWRLLRDRLPTKDNLANRGILPL 1032
YSV+ AYD L +L+W +VP L+W++L +R+ TK NL RG+ +
Sbjct: 6 YSVKSAYDFLHGCANAQWDNIFKLLWSVKVPSNAIALSWKVLINRVQTKVNLNRRGV--V 179
Query: 1033 EARMCVSSCGNEEDVNHLFLSCATFSALWPLVQAWLGVVGVDSQSTSDHLVQFINYAG 1090
+ +C +EE +HL SC +W + GV V + H +Q + G
Sbjct: 180 ISNVCPLCSLDEESTDHLLFSCPIV*RIWSKISE*FGVFSVFPNDSHGHFLQHLGSCG 353
>AV412895
Length = 405
Score = 62.0 bits (149), Expect = 5e-10
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +1
Query: 972 GYSVRGAYDMLTSQEQPHLHQNLELIWHTQVPLKVSILAWRLLRDRLPTKDNLANRGILP 1031
G+SV ++ L Q IW PL + WR+L R+ T+DNL R ++
Sbjct: 7 GFSVNSSFVFL*DQYLEEPDPVFN*IWMVPAPLNIKAFVWRVLLGRIQTRDNLLKRQVIH 186
Query: 1032 LEARMCVSSCG-NEEDVNHLFLSCATFSALWPLVQAWLGVVGVDSQSTSDHLVQF 1085
CG EE +HL SCA +W AWLGV HL+QF
Sbjct: 187 NALDAICPLCGLAEESGSHLLFSCAESMLIWYECFAWLGVSTAQVSDPKVHLLQF 351
>BP060613
Length = 378
Score = 60.5 bits (145), Expect = 1e-09
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +1
Query: 771 WGGGEDKRKISWIRWDTLSLRKEYGGLGVTRLREFNLALLGKWCWRLLLEKEALWRKVLV 830
W + R + W +WD L+ K+ GGLG N ALL K WR+L +ALW ++L
Sbjct: 46 WWSSKGTRGVHWRKWDLLTELKDEGGLGFKDFEIQNQALLAKQAWRILHNPDALWVQILK 225
Query: 831 ARYGVADGGLEDGGRSCSSW-WREIVRIRDGIGEGGEGWFGS 871
A Y L+ R+ +SW W ++ R+ + + G+ GS
Sbjct: 226 ALYFPHHDFLQTTKRTGASWVWSSLLHGRELLLKQGQWQLGS 351
>BP056597
Length = 414
Score = 56.6 bits (135), Expect = 2e-08
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 11/110 (10%)
Frame = +3
Query: 931 WRRRLWAWE---------EELVE--EFXALLLTVSLQESVTDRWIWLPTQDDGYSVRGAY 979
W W W+ E++++ ++ + SL D W+W+ D YSV+ AY
Sbjct: 69 WLENKWVWDFSWKNPISGEDVLKLGVMKQIVSSFSLINGKKDTWVWILEGDGQYSVKSAY 248
Query: 980 DMLTSQEQPHLHQNLELIWHTQVPLKVSILAWRLLRDRLPTKDNLANRGI 1029
D+L+ + +W P L WR+ DR+ TKDNL+ R +
Sbjct: 249 DLLSGLDTTIGISVFSKLWKACAPSNAVALGWRVFLDRIQTKDNLSRRHV 398
>TC19704 weakly similar to UP|Q9SZ87 (Q9SZ87) RNA-directed DNA
polymerase-like protein, partial (3%)
Length = 530
Score = 53.1 bits (126), Expect = 2e-07
Identities = 35/107 (32%), Positives = 47/107 (43%)
Frame = -3
Query: 214 LKEKLKLMKAALKEWHVANTLNLPSKIVSLKNRRAVLDSKGEEEELSEEELGELHGISSD 273
L K K AL EWH N +I LKN+ L + S E+ E+
Sbjct: 459 LSGKTTNTKLALTEWHHQNFSRADKEIAELKNQLEHLQNYSN----SGEDWQEIKQRKMR 292
Query: 274 IHSLSRLNTSICWQQSRLNWLRDGDANSKFFHSVLAARRRINSLSSI 320
+ L R Q+SR+ WL+ GD N+KFFH+ RR N + I
Sbjct: 291 LKDLWRQEELFWSQRSRIKWLKSGDKNTKFFHASTVQRRERNRIERI 151
>TC18742 similar to UP|Q9FZG5 (Q9FZG5) T2E6.4, partial (3%)
Length = 912
Score = 52.0 bits (123), Expect = 5e-07
Identities = 35/124 (28%), Positives = 65/124 (52%)
Frame = -3
Query: 621 VSHLQFADDTLLIGNKSWANVRALRAGLILLEAMSGLKVNFHKSSLVGVNITGSWLSEAA 680
+SHL FAD+ ++ N ++ + L + + +SGL N KS V + + + ++
Sbjct: 373 ISHLCFADNLMVFSNGYLESIAIINNVLHIFQHLSGLTPNPAKSE-VFILVKETTKNQIT 197
Query: 681 SVLGCKVGKIPFLYLGLSIGGDPRRLLFWEPVVNRIKNRLSGWQSRFLSFGGRLVLLKFV 740
++LG K GK+P LG+ + + +V+R ++L W R LS+ GRL L+ +
Sbjct: 196 NMLGYKEGKLPVR*LGVPQLTTKLKASDCKVLVDRKPSKLQHWTGRSLSYAGRLQLINSI 17
Query: 741 LTAL 744
L ++
Sbjct: 16 LFSM 5
>AV414139
Length = 309
Score = 50.8 bits (120), Expect = 1e-06
Identities = 28/85 (32%), Positives = 37/85 (42%)
Frame = -2
Query: 930 RWRRRLWAWEEELVEEFXALLLTVSLQESVTDRWIWLPTQDDGYSVRGAYDMLTSQEQPH 989
RWRR L E+ + L V LQ+ DRW W +D Y+VR AY +L
Sbjct: 260 RWRRELSVREQRQEADLIQALAGVCLQQGTEDRWKWTLDTEDIYTVRSAY*LLLDPIADS 81
Query: 990 LHQNLELIWHTQVPLKVSILAWRLL 1014
+ E +W P + WRLL
Sbjct: 80 DSEVYEKVWVGIAPSNANAFVWRLL 6
>AV411435
Length = 426
Score = 45.4 bits (106), Expect = 5e-05
Identities = 33/116 (28%), Positives = 44/116 (37%), Gaps = 15/116 (12%)
Frame = +3
Query: 961 DRWIWLPTQDDGYSVRGAY-----------DMLTSQEQPHLHQNLELIWHT----QVPLK 1005
DR W YSV+ Y ++ +S P +WHT QVP K
Sbjct: 39 DRLFWPFIPSGEYSVKSGYRAVKATQFNLSNLASSSSHPS-----SFLWHTIWGAQVPKK 203
Query: 1006 VSILAWRLLRDRLPTKDNLANRGILPLEARMCVSSCGNEEDVNHLFLSCATFSALW 1061
V WR + +P K NL R + C ED+NH L+C A+W
Sbjct: 204 VRSFLWRAANNAIPVKRNLKRRNM--GRDDFCPICNKGPEDINHALLACEWTRAVW 365
>AU089037
Length = 245
Score = 43.1 bits (100), Expect = 2e-04
Identities = 24/77 (31%), Positives = 34/77 (43%), Gaps = 1/77 (1%)
Frame = -1
Query: 979 YDMLTSQEQPHLHQNLELIWHTQVPLKVSILAWRLLRDRLPTKDNLANRGILPL-EARMC 1037
Y +L Q + +W P AWRL+ DR+ T+ NL R ++ E +C
Sbjct: 245 YAVLLGSIQVPSSDIFQKLWKVPAPSNAVSFAWRLILDRVQTRGNLRRRQVIQQSEEALC 66
Query: 1038 VSSCGNEEDVNHLFLSC 1054
EE +HLF SC
Sbjct: 65 PMCSQCEESSSHLFFSC 15
>TC12829
Length = 448
Score = 42.7 bits (99), Expect = 3e-04
Identities = 22/60 (36%), Positives = 33/60 (54%), Gaps = 2/60 (3%)
Frame = +3
Query: 726 RFLSFGGRLVLLKFVLTALPVYALSFFKAPSGIISSIESLFNKFF--WGGGEDKRKISWI 783
+FL GR VL+K V A+P Y +S F P I S IE + KF+ W ++ ++W+
Sbjct: 255 KFLYRAGREVLIKSVTKAIPTYIMSCFALPDSICSQIEGMVGKFYLEW*CVSEEYSLAWM 434
>CN825682
Length = 626
Score = 42.0 bits (97), Expect = 5e-04
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = -3
Query: 78 GDFNTVRSVDERRSVRGSQVVDDCAPFNDFIEDRVLINLPLCGRKFTWYNGDGRSMST-- 135
GDFN + E+ R Q F DF++ L++L L G +FTW + + T
Sbjct: 288 GDFNEILHHQEKEGAR-DQDPTRIQVFRDFLDGANLMDLELKGCRFTWLSNLRNGLVTKE 112
Query: 136 -LDRFLLSEEWCMVWPTCLQVAQLRGLSDHCP 166
LDR L++ W + +P +A SDH P
Sbjct: 111 RLDRVLVNWTWRLDYPNATAMALPIISSDHSP 16
>CN825238
Length = 692
Score = 40.0 bits (92), Expect = 0.002
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Frame = +3
Query: 938 WEEELVE-----EFXALLLTVSLQESVT-DRWIWLPTQDDGYSVRGAYDMLTSQEQPHLH 991
W +L++ E A++ ++ L T + +W +++ +SVR AY + ++
Sbjct: 321 WNVQLIDQLFPKETAAVIKSIPLGWRTTRNSCLWRWSRNGAFSVRSAYYNIQVAKEMQTS 500
Query: 992 QNL------ELIWHTQVPLKVSILAWRLLRDRLPTKDNLANRGI 1029
+ + +W T VP K+ A+R+ R+ +P ++NL RGI
Sbjct: 501 SSAASSFPWKKLWRTPVPNKMKHFAYRVARNIIPCRENLQRRGI 632
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.323 0.140 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,787,032
Number of Sequences: 28460
Number of extensions: 351307
Number of successful extensions: 2050
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 2000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2033
length of query: 1091
length of database: 4,897,600
effective HSP length: 100
effective length of query: 991
effective length of database: 2,051,600
effective search space: 2033135600
effective search space used: 2033135600
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)
Medicago: description of AC122166.6