BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122163.7 - phase: 0
(317 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC14222 similar to UP|Q41681 (Q41681) 1-aminocyclopropane-1-carb... 570 e-164
TC14383 homologue to UP|Q8W3Y3 (Q8W3Y3) 1-aminocyclopropane-1-ca... 498 e-142
TC11971 weakly similar to UP|Q43419 (Q43419) ACC oxidase, partia... 204 1e-66
BI420511 211 1e-55
AV414708 195 1e-50
TC7931 weakly similar to UP|Q43640 (Q43640) Dioxygenase, partial... 164 1e-41
TC7936 similar to UP|Q9SP53 (Q9SP53) Flavanone 3-hydroxylase, pa... 159 6e-40
TC14685 weakly similar to UP|Q43383 (Q43383) 2A6 protein, partia... 142 6e-35
TC15818 similar to UP|Q9FFF6 (Q9FFF6) Leucoanthocyanidin dioxyge... 130 2e-31
TC15946 weakly similar to UP|Q43383 (Q43383) 2A6 protein, partia... 93 3e-31
AW719573 123 5e-29
TC11623 similar to UP|O04076 (O04076) ACC-oxidase, partial (28%) 122 6e-29
TC10874 similar to UP|Q8LF06 (Q8LF06) Leucoanthocyanidin dioxyge... 114 2e-26
TC13344 similar to UP|Q84L58 (Q84L58) 1-aminocyclopropane-1-carb... 107 2e-24
TC13092 similar to UP|Q41681 (Q41681) 1-aminocyclopropane-1-carb... 105 8e-24
TC15759 similar to UP|Q8LF06 (Q8LF06) Leucoanthocyanidin dioxyge... 105 1e-23
TC8129 similar to UP|Q9XG83 (Q9XG83) GA 2-oxidase, partial (90%) 105 1e-23
TC11427 weakly similar to UP|Q9LTH7 (Q9LTH7) Leucoanthocyanidin ... 89 5e-21
TC18295 similar to UP|Q39224 (Q39224) SRG1 mRNA (F6I1.30/F6I1.30... 96 1e-20
BI417790 91 2e-19
>TC14222 similar to UP|Q41681 (Q41681) 1-aminocyclopropane-1-carboxylate
oxidase homolog (ACC oxidase) , partial (97%)
Length = 1597
Score = 570 bits (1470), Expect = e-164
Identities = 280/319 (87%), Positives = 299/319 (92%), Gaps = 2/319 (0%)
Frame = +1
Query: 1 MENFPVVDMGKLNTEERKATMEMIKDACENWGFFECVNHSISIELMDKVEKLTKEHYKKC 60
M NFPVVDM KLNTEER ATME+IKDACENWGFFE VNH IS E MD VE+LTKEHYK+
Sbjct: 46 MANFPVVDMSKLNTEERVATMELIKDACENWGFFELVNHEISTEFMDTVERLTKEHYKRF 225
Query: 61 MEQRFKEMVASKGLECVQSEINDLDWESTFFLRHLPSSNISEIPDLDEDYRKTMKEFAEK 120
MEQRFKEMVA+KGLE VQSEI+DLDWESTFFLRHLPSSNISE+PDLDEDYRK MKEFA K
Sbjct: 226 MEQRFKEMVATKGLETVQSEIDDLDWESTFFLRHLPSSNISEVPDLDEDYRKVMKEFAVK 405
Query: 121 LEKLAEELLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDA 180
LEKLAE LLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDA
Sbjct: 406 LEKLAENLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDA 585
Query: 181 GGIILLFQDDKVSGLQLLKDDQWIDVPPMPHSIVINLGDQLEVITNGKYKSVMHRVIAQT 240
GGIILLFQDDKVSGLQLLKDDQWIDVPPM HSIV+NLGDQLEVITNGKYKSVMHRVIAQT
Sbjct: 586 GGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQT 765
Query: 241 DGARMSIASFYNPGNDAVISPASTLLKEDETSEIYPKFIFDDYMKLYMGLKFQAKEPRFE 300
DGARMS+ASFYNPG+DAVISPA +L+KEDETS++YPKF+F+DYMKLY+G+KFQAKEPRFE
Sbjct: 766 DGARMSLASFYNPGDDAVISPAPSLVKEDETSQVYPKFVFEDYMKLYLGVKFQAKEPRFE 945
Query: 301 AMMKAMSS--VEVGPVVTI 317
+MKA SS VEVGPV T+
Sbjct: 946 -VMKARSSSVVEVGPVATV 999
>TC14383 homologue to UP|Q8W3Y3 (Q8W3Y3) 1-aminocyclopropane-1-carboxylic
acid oxidase, complete
Length = 1249
Score = 498 bits (1281), Expect = e-142
Identities = 238/318 (74%), Positives = 277/318 (86%), Gaps = 2/318 (0%)
Frame = +3
Query: 1 MENFPVVDMGKLNTEERKATMEMIKDACENWGFFECVNHSISIELMDKVEKLTKEHYKKC 60
M NFPV+ + KLN EERK IKDACENWGFFE VNH I ++MD VE+LTKEHY+ C
Sbjct: 39 MANFPVISLEKLNGEERKDIKLQIKDACENWGFFELVNHGIPHDVMDTVERLTKEHYRIC 218
Query: 61 MEQRFKEMVASKGLECVQSEINDLDWESTFFLRHLPSSNISEIPDLDEDYRKTMKEFAEK 120
MEQRFKE++ASKGLE VQ+E+ D+DWESTF LRHLP SNISEIPDL ++YRK MK+FA +
Sbjct: 219 MEQRFKELMASKGLEAVQTEVKDMDWESTFHLRHLPESNISEIPDLTDEYRKVMKDFALR 398
Query: 121 LEKLAEELLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDA 180
+EKL+E+LLDLLCENLGLEKGYLKK F+GS+GP FGTKV+NYPPCPKP+L+KGLRAHTDA
Sbjct: 399 IEKLSEDLLDLLCENLGLEKGYLKKAFHGSRGPTFGTKVANYPPCPKPNLVKGLRAHTDA 578
Query: 181 GGIILLFQDDKVSGLQLLKDDQWIDVPPMPHSIVINLGDQLEVITNGKYKSVMHRVIAQT 240
GGIILLFQDDKVSGLQLLKD +W+DVPPM HSIV+NLGDQLEVITNGKYKSV HRVIAQT
Sbjct: 579 GGIILLFQDDKVSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGKYKSVEHRVIAQT 758
Query: 241 DGARMSIASFYNPGNDAVISPASTLLKE--DETSEIYPKFIFDDYMKLYMGLKFQAKEPR 298
DG RMSIASFYNPG+DAVI PA LL++ +E +++YPKF+F+DYMKLY GLKF AKEPR
Sbjct: 759 DGTRMSIASFYNPGSDAVIYPAPELLEKEAEEKNQLYPKFVFEDYMKLYAGLKFDAKEPR 938
Query: 299 FEAMMKAMSSVEVGPVVT 316
FEA +KA +V +GP+ T
Sbjct: 939 FEA-LKASPNVTLGPIAT 989
>TC11971 weakly similar to UP|Q43419 (Q43419) ACC oxidase, partial (69%)
Length = 730
Score = 204 bits (518), Expect(2) = 1e-66
Identities = 94/167 (56%), Positives = 128/167 (76%), Gaps = 1/167 (0%)
Frame = +3
Query: 78 QSEINDLDWESTFFLRHLPSSNISEIPDLDEDYRKTMKEFAEKLEKLAEELLDLLCENLG 137
+ + +D+DWES FF+ H P SNI +I +L E+ R+TM ++ EKL +LAE+L L+ ENLG
Sbjct: 228 KQKASDIDWESAFFIWHRPKSNIKQISNLSEELRQTMDQYIEKLIQLAEDLSGLMSENLG 407
Query: 138 LEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQL 197
LEK Y+KK F GS GP GTKV+ YP CP P+L++GLR HTDAGGIILL QDD+V GL+
Sbjct: 408 LEKDYIKKAFSGSDGPAMGTKVAKYPQCPNPELVRGLREHTDAGGIILLLQDDQVPGLEF 587
Query: 198 LKDDQWIDVPPMP-HSIVINLGDQLEVITNGKYKSVMHRVIAQTDGA 243
KD +W+++PP ++I IN GDQ+EV++NG YKSV+HRV+A +G+
Sbjct: 588 SKDGKWVEIPPSKNNAIFINTGDQIEVLSNGLYKSVVHRVMADKNGS 728
Score = 66.2 bits (160), Expect(2) = 1e-66
Identities = 29/71 (40%), Positives = 45/71 (62%)
Frame = +2
Query: 5 PVVDMGKLNTEERKATMEMIKDACENWGFFECVNHSISIELMDKVEKLTKEHYKKCMEQR 64
P++D LN ++R TM ++ +AC+NWG F NH I LM+KV++L HY++ ++Q
Sbjct: 11 PIIDFSTLNGDKRGETMALLHEACKNWGCFLIENHGIDKSLMEKVKQLINTHYEENLKQS 190
Query: 65 FKEMVASKGLE 75
F E +K LE
Sbjct: 191FYESEKAKSLE 223
>BI420511
Length = 384
Score = 211 bits (538), Expect = 1e-55
Identities = 104/127 (81%), Positives = 111/127 (86%), Gaps = 2/127 (1%)
Frame = +3
Query: 151 KGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMP 210
KGPNFGTKV+NYP CPKP+L+KGLRAHTDAGGIILL QDDKVSGLQLLKD QW+DVPPM
Sbjct: 3 KGPNFGTKVANYPACPKPELVKGLRAHTDAGGIILLLQDDKVSGLQLLKDGQWVDVPPMR 182
Query: 211 HSIVINLGDQLEVITNGKYKSVMHRVIAQTDGARMSIASFYNPGNDAVISPASTLL--KE 268
HSIVINLGDQLEVITNGKYKSV HRVIA+TDG RMSIASFYNP NDAVI PA LL K
Sbjct: 183 HSIVINLGDQLEVITNGKYKSVEHRVIAKTDGTRMSIASFYNPANDAVIYPAPALLESKA 362
Query: 269 DETSEIY 275
E ++Y
Sbjct: 363 LEAEQVY 383
>AV414708
Length = 411
Score = 195 bits (495), Expect = 1e-50
Identities = 88/125 (70%), Positives = 109/125 (86%)
Frame = +3
Query: 1 MENFPVVDMGKLNTEERKATMEMIKDACENWGFFECVNHSISIELMDKVEKLTKEHYKKC 60
MENFPV+++ +N ++RKA +E I+DACENWGFFE VNH I EL+D VE+LTKEHY+KC
Sbjct: 36 MENFPVINLENINGDKRKAILEKIEDACENWGFFELVNHGIPHELLDTVERLTKEHYRKC 215
Query: 61 MEQRFKEMVASKGLECVQSEINDLDWESTFFLRHLPSSNISEIPDLDEDYRKTMKEFAEK 120
MEQRFKE++ASKGL+ VQ+E+ ++DWE+TFFLRHLP SNISEIPDL E+YR MKEFA+K
Sbjct: 216 MEQRFKEVMASKGLDDVQAEVKEMDWETTFFLRHLPESNISEIPDLSEEYRNAMKEFAQK 395
Query: 121 LEKLA 125
LEKLA
Sbjct: 396 LEKLA 410
>TC7931 weakly similar to UP|Q43640 (Q43640) Dioxygenase, partial (29%)
Length = 1477
Score = 164 bits (416), Expect = 1e-41
Identities = 97/306 (31%), Positives = 166/306 (53%), Gaps = 10/306 (3%)
Frame = +1
Query: 5 PVVDMGKLNTEERKATMEMIKDACENWGFFECVNHSISIELMDKVEKLTKEHYKKCMEQR 64
PVVD+G +R T++ I A E +GFF+ +NH +S EL++ + KE + E++
Sbjct: 136 PVVDLGG---HDRAETLKQIFKASEEYGFFQVINHGVSNELIEDTLNIFKEFHAMPAEEK 306
Query: 65 FKEMVASKGLECV---QSEINDLD----WESTFFLRH--LPSSNISEI-PDLDEDYRKTM 114
E C+ EIN+ D W+ T LRH PS E P YR+ +
Sbjct: 307 LSESSRDPNGSCMLYTSREINNKDCIQFWKDT--LRHPCTPSEEFMEFWPLKPARYREVV 480
Query: 115 KEFAEKLEKLAEELLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGL 174
+++ ++L +L ++L++LCE LGL+ Y S+ P + ++YPPCP+P L GL
Sbjct: 481 EKYTKELRELGSQILEMLCEGLGLDPRYCCAGL--SENPLLLS--NHYPPCPEPSLTLGL 648
Query: 175 RAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMPHSIVINLGDQLEVITNGKYKSVMH 234
H D + +L QD V+ LQ+ KD +WI + P+P++ V+N+G L++I+NG+ V H
Sbjct: 649 SKHRDPTLVTILLQDTDVNALQVFKDGEWISIEPIPYAFVVNIGLLLQIISNGRLVGVEH 828
Query: 235 RVIAQTDGARMSIASFYNPGNDAVISPASTLLKEDETSEIYPKFIFDDYMKLYMGLKFQA 294
RV+ + +R ++A F P + ++ PA L++ IY F++++++ F+
Sbjct: 829 RVVTNSSISRTTVAYFIRPKKEEIVEPAKALVRTG-AHPIYRSIAFEEFLRI-----FKT 990
Query: 295 KEPRFE 300
++P E
Sbjct: 991 RDPAIE 1008
>TC7936 similar to UP|Q9SP53 (Q9SP53) Flavanone 3-hydroxylase, partial
(94%)
Length = 1492
Score = 159 bits (402), Expect = 6e-40
Identities = 106/319 (33%), Positives = 164/319 (51%), Gaps = 18/319 (5%)
Frame = +3
Query: 5 PVVDMGKLNT--EERKATMEMIKDACENWGFFECVNHSISIELMDKVEKLTKEHYKKCME 62
PV+ + ++ + R I +ACENWG F+ V+H + EL+ + L KE + E
Sbjct: 264 PVISLAGIDEVDDRRSEICNKIVEACENWGIFQVVDHGVDTELVSHMTTLAKEFFALPPE 443
Query: 63 Q--RFKEMVASKGLECVQSEIND---LDWES--TFFLRHLPSSNISEIPDLDEDYRKTMK 115
+ RF KG V S + DW T+F + + + S PD ++ +
Sbjct: 444 EKLRFDMTGGKKGGFIVSSHLQGESVQDWREIVTYFSYPIRNRDYSRWPDTPAGWKAVTE 623
Query: 116 EFAEKLEKLAEELLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLR 175
E++EKL LA +LL++L E +GLEK L K V+ YP CP+PDL GL+
Sbjct: 624 EYSEKLMGLACKLLEVLSEAMGLEKEALTKACVDMDQK---VVVNYYPKCPQPDLTLGLK 794
Query: 176 AHTDAGGIILLFQDDKVSGLQLLKDD--QWIDVPPMPHSIVINLGDQLEVITNGKYKSVM 233
HTD G I LL QD +V GLQ +D+ WI V P+ + V+NLGD ++NG++K+
Sbjct: 795 RHTDPGTITLLLQD-QVGGLQATRDNGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNAD 971
Query: 234 HRVIAQTDGARMSIASFYNPGNDAVISPASTLLKEDETSEIYPKFIFDDYMKLYMG---- 289
H+ + ++ +R+SIA+F NP DA + P ++E E S + F + + M
Sbjct: 972 HQAVVNSNSSRLSIATFQNPAPDATVYPLK--VREGEKSVMEEPITFAEMYRRKMSKDIE 1145
Query: 290 ---LKFQAKEPRFEAMMKA 305
+K AKE + + + KA
Sbjct: 1146LARMKKLAKEKKLQDLEKA 1202
>TC14685 weakly similar to UP|Q43383 (Q43383) 2A6 protein, partial (38%)
Length = 1323
Score = 142 bits (359), Expect = 6e-35
Identities = 93/301 (30%), Positives = 159/301 (51%), Gaps = 10/301 (3%)
Frame = +1
Query: 5 PVVDMGKLNTEERKATMEMIKDACENWGFFECVNHSISIELMDKVEKLTKEHYKKCMEQR 64
P +D+ +N E R A ++ I+ A + GFF+ VNH + ++L+ + K +++ E+R
Sbjct: 301 PTIDLAAVN-ESRAAVVDQIRRAASSVGFFQVVNHGVPLDLLRRTVAAIKAFHEQPEEER 477
Query: 65 FKEMVASKGLECVQSEINDLD--------WESTFFLRHLPSS-NISEIPDLDEDYRKTMK 115
+ G S I+++D W T LR P++ + S IP++ R+ +
Sbjct: 478 ARVYTREMGTGV--SYISNVDLFQSKAASWRDTLQLRMGPTAVDQSMIPEV---CRQEVM 642
Query: 116 EFAEKLEKLAEELLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLR 175
E+ +++ ++ E L LL E LGL+ G L ++ G YP CP+PDL GL
Sbjct: 643 EWDKEVVRVGEVLYGLLSEGLGLDAGRLSEMGLVQGRVMVG---HYYPFCPQPDLTVGLN 813
Query: 176 AHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMPHSIVINLGDQLEVITNGKYKSVMHR 235
+H D G + ++ QD + GLQ+ + W+DV P+ ++VIN+GD L++I+N +YKS HR
Sbjct: 814 SHADPGALTVVLQDH-IGGLQVRTTEGWVDVKPLDGALVINIGDLLQIISNEEYKSADHR 990
Query: 236 VIAQT-DGARMSIASFYNPGNDAVISPASTLLKEDETSEIYPKFIFDDYMKLYMGLKFQA 294
V+A + + R+S+A F NPGN + L E +Y F D+++ + +
Sbjct: 991 VLANSANEPRVSVAVFLNPGNREKLFGPLPELTSAEKPALYRNFTLDEFLTRFFKKELDG 1170
Query: 295 K 295
K
Sbjct: 1171K 1173
>TC15818 similar to UP|Q9FFF6 (Q9FFF6) Leucoanthocyanidin dioxygenase-like
protein (AT5g05600/MOP10_14), partial (37%)
Length = 618
Score = 130 bits (328), Expect = 2e-31
Identities = 61/127 (48%), Positives = 91/127 (71%)
Frame = +2
Query: 162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMPHSIVINLGDQL 221
YP CP+PDL GL H+D GG+ +L DD VSGLQ+ K + WI V P+P++ +IN+GDQ+
Sbjct: 2 YPKCPQPDLTLGLSPHSDPGGLTILLPDDFVSGLQVRKGNYWITVKPVPNAFIINIGDQI 181
Query: 222 EVITNGKYKSVMHRVIAQTDGARMSIASFYNPGNDAVISPASTLLKEDETSEIYPKFIFD 281
+V++N YKSV HRVI ++ R+S+A FYNP +D +I PA L+ E++ + +YP +D
Sbjct: 182 QVLSNTIYKSVEHRVIVNSNQDRVSLAMFYNPKSDLLIEPAKELVTEEKPA-LYPPMTYD 358
Query: 282 DYMKLYM 288
+Y +LY+
Sbjct: 359 EY-RLYI 376
>TC15946 weakly similar to UP|Q43383 (Q43383) 2A6 protein, partial (56%)
Length = 1252
Score = 93.2 bits (230), Expect(2) = 3e-31
Identities = 61/213 (28%), Positives = 105/213 (48%), Gaps = 9/213 (4%)
Frame = +1
Query: 1 MENFPVVDMGKLNTEERKATMEMIKDACENWGFFECVNHSISIELMDKVEKLTKEHYKKC 60
+ + P++D+ T+E + I+ AC WGFF+ +NH I ++D++ + +++
Sbjct: 220 LSSVPLIDL----TDEHSEVIGKIRSACHEWGFFQVINHGIPTSVLDEMIDGIRRFHEQD 387
Query: 61 MEQR--------FKEMVASKGLECVQSEINDLDWESTFFLRHLPS-SNISEIPDLDEDYR 111
E R K+++ + + +W TF P EIP + D
Sbjct: 388 SEVRKQFHSRDLKKKVMYYTNISLFSGQA--ANWRDTFGFAVAPDPPKPDEIPLVCRD-- 555
Query: 112 KTMKEFAEKLEKLAEELLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLI 171
+ E+++K+++L +L+LL E LGL YLK++ + YPPCP+P L
Sbjct: 556 -IVMEYSKKIKELGFTILELLSEGLGLNPSYLKEL---NCAEGLFVLGHYYPPCPEPKLT 723
Query: 172 KGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWI 204
G HTD I LL Q D++ GLQ+L ++QW+
Sbjct: 724 MGTTKHTDGNFITLLLQ-DQLGGLQILHENQWV 819
Score = 58.2 bits (139), Expect(2) = 3e-31
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Frame = +2
Query: 205 DVPPMPHSIVINLGDQLEVITNGKYKSVMHRVIAQTDGARMSIASFY--NP----GNDAV 258
DV P+ ++V+N+GD L++ITN ++ SV HRV++Q G R+S+ASF+ +P G V
Sbjct: 821 DVHPVHGALVVNIGDLLQLITNDRFVSVYHRVLSQNIGPRISVASFFVNSPDPIEGTLKV 1000
Query: 259 ISPASTLLKEDETSEIYPKFIFDDYMKLY 287
P LL E E IY D++ Y
Sbjct: 1001YGPIKELLTE-ENPPIYRDVTIKDFLAHY 1084
>AW719573
Length = 521
Score = 123 bits (308), Expect = 5e-29
Identities = 53/161 (32%), Positives = 103/161 (63%), Gaps = 1/161 (0%)
Frame = +2
Query: 106 LDEDYRKTMKEFAEKLEKLAEELLDLLCENLGLEKGYLKKVFY-GSKGPNFGTKVSNYPP 164
+ + +R+ ++ + +L L+ ++++L+ L ++ + +++ GS+ +++ YPP
Sbjct: 50 IPQPFRENLEIYCAELNNLSIKIMELMANALKIDPKEITEIYNEGSQT----IRMNYYPP 217
Query: 165 CPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMPHSIVINLGDQLEVI 224
CP+P+ + GL++HTD G+ +L Q + + GLQ+ KD W+ V P+P++ +IN+GD LE+
Sbjct: 218 CPQPERVIGLKSHTDGAGLTILLQANDIEGLQIRKDGHWVPVQPLPNAFIINIGDMLEIT 397
Query: 225 TNGKYKSVMHRVIAQTDGARMSIASFYNPGNDAVISPASTL 265
TNG Y S+ HR ++ R+S+A+FY P A ++PA +L
Sbjct: 398 TNGIYASIEHRATVNSEKERISLATFYGPNMQATLAPAPSL 520
>TC11623 similar to UP|O04076 (O04076) ACC-oxidase, partial (28%)
Length = 598
Score = 122 bits (307), Expect = 6e-29
Identities = 64/89 (71%), Positives = 73/89 (81%), Gaps = 2/89 (2%)
Frame = +1
Query: 222 EVITNGKYKSVMHRVIAQTDGARMSIASFYNPGNDAVISPASTLL--KEDETSEIYPKFI 279
+VIT+GKYKSV HRVIA+TDG RMSIASFYNP NDAVI PA LL K E +YPKF+
Sbjct: 88 QVITHGKYKSVEHRVIAKTDGTRMSIASFYNPANDAVIYPAPALLESKALEAEPVYPKFV 267
Query: 280 FDDYMKLYMGLKFQAKEPRFEAMMKAMSS 308
F+DYMKLY LKFQAKEPRF+A MKA++S
Sbjct: 268 FEDYMKLYTKLKFQAKEPRFQA-MKAVNS 351
>TC10874 similar to UP|Q8LF06 (Q8LF06) Leucoanthocyanidin dioxygenase-like
protein, partial (38%)
Length = 723
Score = 114 bits (285), Expect = 2e-26
Identities = 57/139 (41%), Positives = 87/139 (62%)
Frame = +2
Query: 170 LIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMPHSIVINLGDQLEVITNGKY 229
L GL +H+D GG+ +L DD+V GLQ+ K D WI V P H+ ++N+GDQ++V++N Y
Sbjct: 2 LTLGLSSHSDPGGMTMLLPDDQVRGLQVRKGDDWITVNPARHAFIVNIGDQIQVLSNAIY 181
Query: 230 KSVMHRVIAQTDGARMSIASFYNPGNDAVISPASTLLKEDETSEIYPKFIFDDYMKLYMG 289
SV HRVI +D R+S+A FYNP +D I P L+ D+ + +YP FD+Y
Sbjct: 182 TSVEHRVIVNSDKERVSLAFFYNPKSDIPIEPVKELVTPDKPA-LYPAMTFDEYR----- 343
Query: 290 LKFQAKEPRFEAMMKAMSS 308
L + + PR ++ +++M S
Sbjct: 344 LFIRMRGPRGKSQVESMKS 400
>TC13344 similar to UP|Q84L58 (Q84L58) 1-aminocyclopropane-1-carboxylic acid
oxidase, partial (31%)
Length = 598
Score = 107 bits (268), Expect = 2e-24
Identities = 52/96 (54%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
Frame = +2
Query: 210 PHSIVINLGDQLEVITNGKYKSVMHRVIAQTDGARMSIASFYNPGNDAVISPASTLLKED 269
P++IVIN GDQ+EV++NG+YKS HRV+ G R S+ASFYNP A ISPA L+ E
Sbjct: 2 PNAIVINTGDQIEVLSNGRYKSCWHRVLGSPSGNRRSVASFYNPSLKATISPAPQLVVEK 181
Query: 270 ETSEI---YPKFIFDDYMKLYMGLKFQAKEPRFEAM 302
E E+ YP+F+F DYM +Y KF KEPRF+A+
Sbjct: 182 ENQEVEDTYPEFVFGDYMSVYAEQKFLPKEPRFQAV 289
>TC13092 similar to UP|Q41681 (Q41681) 1-aminocyclopropane-1-carboxylate
oxidase homolog (ACC oxidase) , partial (20%)
Length = 443
Score = 105 bits (263), Expect = 8e-24
Identities = 52/67 (77%), Positives = 60/67 (88%), Gaps = 1/67 (1%)
Frame = +1
Query: 244 RMSIASFYNPGNDAVISPASTLLKE-DETSEIYPKFIFDDYMKLYMGLKFQAKEPRFEAM 302
RMSIASFYNPGNDA+ISPA L+KE D+TS++YPKF+FDDYMKLY GLKFQA+EPRFE
Sbjct: 1 RMSIASFYNPGNDAMISPAPALVKENDDTSQLYPKFVFDDYMKLYAGLKFQAQEPRFET- 177
Query: 303 MKAMSSV 309
MKAM S+
Sbjct: 178 MKAMESI 198
>TC15759 similar to UP|Q8LF06 (Q8LF06) Leucoanthocyanidin dioxygenase-like
protein, partial (34%)
Length = 929
Score = 105 bits (262), Expect = 1e-23
Identities = 48/100 (48%), Positives = 70/100 (70%)
Frame = +2
Query: 186 LFQDDKVSGLQLLKDDQWIDVPPMPHSIVINLGDQLEVITNGKYKSVMHRVIAQTDGARM 245
L DD+V+GLQ+ K D WI V P+PH+ ++N+GDQ++V++N YKSV HRVI ++ R+
Sbjct: 2 LLPDDQVTGLQVRKGDNWITVKPVPHAFIVNIGDQIQVLSNAIYKSVEHRVIVNSNKERV 181
Query: 246 SIASFYNPGNDAVISPASTLLKEDETSEIYPKFIFDDYMK 285
S+A FYNP D I PA L+KED+ + +Y FD+Y +
Sbjct: 182 SLAFFYNPRGDIPIEPAKELVKEDKPA-LYTAMTFDEYRR 298
>TC8129 similar to UP|Q9XG83 (Q9XG83) GA 2-oxidase, partial (90%)
Length = 1278
Score = 105 bits (262), Expect = 1e-23
Identities = 75/282 (26%), Positives = 142/282 (49%), Gaps = 19/282 (6%)
Frame = +2
Query: 23 MIKDACENWGFFECVNHSISIELMDKVEKLTKEHYKKCMEQRFKEMV------ASKGLEC 76
+I +AC+ +GFF+ +NH I +EL+ +E + + ++ K + SK +
Sbjct: 236 LIVNACKEFGFFKIINHDIPMELISNLENEALSFFMQPQSEKEKASLDDPFGYGSKRI-- 409
Query: 77 VQSEINDLDWESTFFLRHLPSSNISEIPDL-----DEDYRKTMKEFAEKLEKLAEELLDL 131
+ D+ W P IS P L + + ++ ++ L+ E+L+L
Sbjct: 410 --GKNGDVGWVEYLLFNTNPDV-ISPNPLLLLEQNQNVFSSAVNDYTLAVKNLSCEILEL 580
Query: 132 LCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDL-------IKGLRAHTDAGGII 184
+ + LG+E+ + + + ++++YP C + +L + G HTD I
Sbjct: 581 MADGLGIEQRNVFSRLIRDEKSDCIFRLNHYPACGELELQAIGGRNLIGFGEHTDPQMIS 760
Query: 185 LLFQDDKVSGLQL-LKDDQWIDVPPMPHSIVINLGDQLEVITNGKYKSVMHRVIAQTDGA 243
+L + + SGLQ+ L+D W+ +PP S IN+GD L+V+TNG ++SV HRV++ T +
Sbjct: 761 VL-RSNNTSGLQICLRDGTWVSIPPDQTSFFINVGDSLQVMTNGSFRSVKHRVLSDTAMS 937
Query: 244 RMSIASFYNPGNDAVISPASTLLKEDETSEIYPKFIFDDYMK 285
R+S+ F ++P +L+ ++E S +Y +F + +Y K
Sbjct: 938 RVSMIYFGGAPLTEKLAPLPSLVSKEEDS-LYKEFTWGEYKK 1060
>TC11427 weakly similar to UP|Q9LTH7 (Q9LTH7) Leucoanthocyanidin
dioxygenase-like protein (AT5g59540/f2o15_200), partial
(30%)
Length = 690
Score = 89.0 bits (219), Expect(2) = 5e-21
Identities = 45/110 (40%), Positives = 70/110 (62%), Gaps = 4/110 (3%)
Frame = +1
Query: 183 IILLFQDDKVSGLQLLKDDQWIDVPPMPHSIVINLGDQLEVITNGKYKSVMHRVIAQTDG 242
++ + D++ GLQ+L +QW+DVPP+ S+V+N+GD L+++TNG++ SV HRV+++ G
Sbjct: 97 LMTILLQDQIGGLQILHQNQWVDVPPVHGSLVVNIGDLLQLMTNGQFSSVYHRVLSRHVG 276
Query: 243 ARMSIASFY----NPGNDAVISPASTLLKEDETSEIYPKFIFDDYMKLYM 288
R+SIASF+ + G VI P LL E E IY + D M Y+
Sbjct: 277 PRISIASFFVNISSQGKSKVIGPIKELLSE-ENPPIYREATIKDVMAHYI 423
Score = 28.1 bits (61), Expect(2) = 5e-21
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 160 SNYPPCPKPDLIKGLRAHTD 179
S YP CP+P+L G H+D
Sbjct: 30 SYYPTCPEPELTMGTSKHSD 89
>TC18295 similar to UP|Q39224 (Q39224) SRG1 mRNA (F6I1.30/F6I1.30)
(At1g17020/F6I1.30), partial (29%)
Length = 561
Score = 95.5 bits (236), Expect = 1e-20
Identities = 50/188 (26%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Frame = +3
Query: 37 VNHSISIELMDKVEKLTKEHYKKCMEQRFK-----EMVASKGLECVQSEINDLDWESTFF 91
+NH ++ L++ ++K ++ + +E++ K E+ G V SE L+W F+
Sbjct: 6 INHGVNPSLVENMKKGVQDLFNLPIEEKKKLWQTPEVGQGFGQAFVVSEEQKLEWADLFY 185
Query: 92 LRHLPSS--NISEIPDLDEDYRKTMKEFAEKLEKLAEELLDLLCENLGLEKGYLKKVFYG 149
+ P + N S IP + + +R + + +L+ + ++ L+ + L E L ++F
Sbjct: 186 INTFPLNKRNTSLIPSIPQPFRDNLDAYCSELKNICVTIIGLMEKALKTETNELVELF-- 359
Query: 150 SKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPM 209
+ + G +++ YPPCP+P+ + GL H+D+G +L Q +++ GLQ+ KD W+ + P+
Sbjct: 360 -EDTSQGMRMNYYPPCPQPEKVIGLNPHSDSGAFTILLQVNEMEGLQIRKDGIWVPIKPL 536
Query: 210 PHSIVINL 217
++ VIN+
Sbjct: 537 SNAFVINI 560
>BI417790
Length = 610
Score = 91.3 bits (225), Expect = 2e-19
Identities = 45/121 (37%), Positives = 71/121 (58%), Gaps = 2/121 (1%)
Frame = +3
Query: 158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK--DDQWIDVPPMPHSIVI 215
+++ YPPCP PD++ G H D+G + +L QD+ VSGLQ+ + D QW+ + P+P + +I
Sbjct: 9 RLNYYPPCPNPDIVLGCGRHKDSGALTILAQDE-VSGLQVRRKCDGQWVRLNPLPDAYII 185
Query: 216 NLGDQLEVITNGKYKSVMHRVIAQTDGARMSIASFYNPGNDAVISPASTLLKEDETSEIY 275
N+GD ++V N Y+SV HRV + AR+S F P + + P L E+ +
Sbjct: 186 NVGDVIQVWCNDAYESVEHRVKLNPEKARLSYPFFLYPSHYTNVEPLEELTNEENPPKYT 365
Query: 276 P 276
P
Sbjct: 366 P 368
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.318 0.136 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,067,929
Number of Sequences: 28460
Number of extensions: 65055
Number of successful extensions: 441
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of query: 317
length of database: 4,897,600
effective HSP length: 90
effective length of query: 227
effective length of database: 2,336,200
effective search space: 530317400
effective search space used: 530317400
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Medicago: description of AC122163.7