Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC121238.1 + phase: 0 
         (533 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AV419737                                                              234  2e-62
TC12047 similar to UP|O81316 (O81316) F6N15.20 protein (SCARECRO...   208  2e-54
TC19345 similar to UP|O81316 (O81316) F6N15.20 protein (SCARECRO...   150  6e-37
TC14825 similar to UP|Q8S4W7 (Q8S4W7) GAI-like protein 1, partia...   122  1e-28
TC14740 similar to UP|Q8W584 (Q8W584) AT4g17230/dl4650c, partial...   104  4e-23
TC11652 similar to UP|O81316 (O81316) F6N15.20 protein (SCARECRO...    91  7e-22
TC12650 similar to UP|O23210 (O23210) SCARECROW-like protein, pa...    80  1e-15
TC11080 similar to UP|Q84TQ7 (Q84TQ7) GIA/RGA-like gibberellin r...    77  7e-15
AV766135                                                               70  8e-13
AV774473                                                               69  1e-12
CN825078                                                               68  3e-12
TC16366 similar to PIR|E96542|E96542 scarecrow-like protein [imp...    52  2e-07
AV414168                                                               47  8e-06
AV418844                                                               44  7e-05
AV770800                                                               43  1e-04
TC18636 similar to UP|Q8W584 (Q8W584) AT4g17230/dl4650c, partial...    38  0.004
BP044387                                                               35  0.030
AV421188                                                               33  0.088
TC17852 similar to UP|Q8W4I8 (Q8W4I8) SCARECROW gene regulator, ...    33  0.15
BF177544                                                               33  0.15

>AV419737 
          Length = 410

 Score =  234 bits (598), Expect = 2e-62
 Identities = 117/138 (84%), Positives = 125/138 (89%)
 Frame = +3

Query: 155 QKVSSSTTGDDASIQLQQSIFDQLFKTAELIEAGNPVQAQGILARLNHQLSPIGNPFQRA 214
           +KV S  TGDD + QLQQSIFDQL+KTAELIEAGNPV AQGILARLNHQLSP G PF RA
Sbjct: 3   EKVDS--TGDDVNNQLQQSIFDQLYKTAELIEAGNPVHAQGILARLNHQLSPNGKPFHRA 176

Query: 215 SFYMKEALQLMLHSNGNNLTAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQSLIEALE 274
           +FYMKEALQ MLHSNG+N   FSPISFIFKIGAYKSFSEISPVLQFANFTCNQ+LIEA+E
Sbjct: 177 AFYMKEALQSMLHSNGHNFLTFSPISFIFKIGAYKSFSEISPVLQFANFTCNQALIEAVE 356

Query: 275 RFDRIHVIDFDIGFGVQW 292
           RFDRIH+IDFDIGFGVQW
Sbjct: 357 RFDRIHIIDFDIGFGVQW 410


>TC12047 similar to UP|O81316 (O81316) F6N15.20 protein (SCARECROW-like 6)
           (SCL6) (AT4g00150/F6N15_20), partial (16%)
          Length = 617

 Score =  208 bits (530), Expect = 2e-54
 Identities = 98/111 (88%), Positives = 105/111 (94%)
 Frame = +3

Query: 423 VLQCYSALLESLDAVNVNLDVLQKIERHYIQPTINKIVLSHHNQRDKLPPWRNMFLQSGF 482
           VLQCYSALLESLDAVNVN DVLQKIERH++QP I KIVL HH+ ++KL PWRN+FLQSGF
Sbjct: 3   VLQCYSALLESLDAVNVNXDVLQKIERHFVQPAIKKIVLGHHHSQEKLTPWRNLFLQSGF 182

Query: 483 SPFSFSNFTEAQAECLVQRAPVRGFQVERKPSSLVLCWQRKELISVSTWRC 533
           SPF+FSNFTEAQAECLVQRAPVRGFQVERKPSSLVLCWQRKELISVSTWRC
Sbjct: 183 SPFTFSNFTEAQAECLVQRAPVRGFQVERKPSSLVLCWQRKELISVSTWRC 335


>TC19345 similar to UP|O81316 (O81316) F6N15.20 protein (SCARECROW-like 6)
           (SCL6) (AT4g00150/F6N15_20), partial (12%)
          Length = 520

 Score =  150 bits (378), Expect = 6e-37
 Identities = 67/89 (75%), Positives = 78/89 (87%)
 Frame = +1

Query: 445 QKIERHYIQPTINKIVLSHHNQRDKLPPWRNMFLQSGFSPFSFSNFTEAQAECLVQRAPV 504
           QKIERH+I P + K +  H++  +KLPPWR+MFLQ GFSPF+FSNFTE+QAECLVQRAPV
Sbjct: 1   QKIERHFILPDMKKTIFGHNHSHEKLPPWRSMFLQYGFSPFTFSNFTESQAECLVQRAPV 180

Query: 505 RGFQVERKPSSLVLCWQRKELISVSTWRC 533
           RGFQ+ERK SS VLCWQ+KELISVSTWRC
Sbjct: 181 RGFQLERKHSSFVLCWQQKELISVSTWRC 267


>TC14825 similar to UP|Q8S4W7 (Q8S4W7) GAI-like protein 1, partial (47%)
          Length = 1392

 Score =  122 bits (306), Expect = 1e-28
 Identities = 79/287 (27%), Positives = 132/287 (45%), Gaps = 7/287 (2%)
 Frame = +2

Query: 253 EISPVLQFANFTCNQSLIEALERFDRIHVIDFDIGFGVQWSSFMQEIVLRSNGKPSLKIT 312
           E  P L+FA+FT NQ+++EA +  DR+HVIDF I  G+QW + MQ + LR  G P+ ++T
Sbjct: 2   ETCPYLKFAHFTANQAILEAFQGKDRVHVIDFAINQGMQWPALMQALALRPGGPPAFRLT 181

Query: 313 AVVSPSSCNEIELNFTQENLSQYAKDLNILFEFNVLNIESLNLPSCPLPGHFFDSNEAIG 372
            +  P+  N   L      L+Q A+ +++ FE+      SL      +        E++ 
Sbjct: 182 GIGPPAPDNSDHLQQVGWKLAQLAETIHVQFEYRGFVANSLADLDASMLDLRPPEEESVA 361

Query: 373 VN--FPVSSFISNPSCFPVALHFLKQLRPKIVVTLDKNCDRMDVPLPTNVVHVLQCYSAL 430
           VN  F +   ++ P         ++Q++P+I+  +++                L  YSAL
Sbjct: 362 VNSVFELHKLLARPGALEKVFSVIRQVQPEILTVVEQEAGHNGASFLDRFTESLHYYSAL 541

Query: 431 LESLDAVNVNLDVLQKIERHYIQPTINKIVLSHHNQR----DKLPPWRNMFLQSGFSPFS 486
            +SL+  +      + +   Y+   I  +V    + R    + L  WR  F  +G SP  
Sbjct: 542 FDSLEGSSAVESQDKAMTEIYLGKQICNVVACEGSDRIERHETLTQWRTRFNSAGLSPVH 721

Query: 487 FSNFTEAQAECLVQR-APVRGFQVERKPSSLVLCWQRKELISVSTWR 532
             +    QA  L+   A   G++VE     L L W  + LI+ S W+
Sbjct: 722 LGSNAFKQASMLLALFAGGDGYRVEENNGCLTLGWHTRPLIATSAWQ 862


>TC14740 similar to UP|Q8W584 (Q8W584) AT4g17230/dl4650c, partial (57%)
          Length = 1406

 Score =  104 bits (259), Expect = 4e-23
 Identities = 90/356 (25%), Positives = 153/356 (42%), Gaps = 27/356 (7%)
 Frame = +1

Query: 204 LSPIGNPFQRASFYMKEALQLMLHSNGNNL---------TAFSPISFIFKIGAYKSFSEI 254
           +S  G+P QR   Y+ E L+  L  +G+ +         T    +S++  +       +I
Sbjct: 10  VSVAGDPSQRLGAYLLEGLRARLELSGSLIYKALKCEQPTGKELMSYMHIL------YQI 171

Query: 255 SPVLQFANFTCNQSLIEALERFDRIHVIDFDIGFGVQWSSFMQEIVLRSNGKPSLKITAV 314
            P  +FA  + N ++ EA+    RIH+IDF I  G QW   +Q +  R  G P ++IT V
Sbjct: 172 CPYWKFAYISANAAIAEAMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPFIRITGV 351

Query: 315 VSPSSCNEI--ELNFTQENLSQYAKDLNILFEFNV-----LNIESLNLPSCPLPGHFFDS 367
               S +     L    E LS +A+   + FEF+        +E  NL   P        
Sbjct: 352 DDSQSFHARGGGLEIVGERLSDFARSYGVPFEFHSAAMSGCEVERENLGVRP-------- 507

Query: 368 NEAIGVNFPV------SSFISNPSCFPVALHFLKQLRPKIVVTLDKNCDRMDVPLPTNVV 421
            EA+ VNFP          +S  +     L  +K L PK+V   ++  +    P     +
Sbjct: 508 GEALAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLAEQESNTNTSPFFNRFM 687

Query: 422 HVLQCYSALLESLDAVNVNLDVLQ-KIERHYIQPTINKIVLSHHNQR----DKLPPWRNM 476
             L+ Y+A+ ES+D      D  +   E+H +   I  +V     +R    +    W+  
Sbjct: 688 ETLEYYTAMFESIDVACPRDDKKRISAEQHCVARDIVNMVACEGAERVERHELFGKWKLR 867

Query: 477 FLQSGFSPFSFSNFTEAQAECLVQRAPVRGFQVERKPSSLVLCWQRKELISVSTWR 532
           F  +GF  +  S+      + L+ R     +++E++  +L L W ++ L++ S WR
Sbjct: 868 FSMAGFKQWPLSSSVMTATQNLL-RDFNHNYRLEQRDGALCLGWMKRALVTSSAWR 1032


>TC11652 similar to UP|O81316 (O81316) F6N15.20 protein (SCARECROW-like 6)
           (SCL6) (AT4g00150/F6N15_20), partial (10%)
          Length = 447

 Score = 90.9 bits (224), Expect(2) = 7e-22
 Identities = 40/50 (80%), Positives = 45/50 (90%)
 Frame = +3

Query: 484 PFSFSNFTEAQAECLVQRAPVRGFQVERKPSSLVLCWQRKELISVSTWRC 533
           P  FSNFTE+QAECLVQR PVRGF VE++ SSLVLCWQRK+LIS+STWRC
Sbjct: 84  PCHFSNFTESQAECLVQRTPVRGFHVEKRQSSLVLCWQRKDLISISTWRC 233



 Score = 30.0 bits (66), Expect(2) = 7e-22
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 458 KIVLSHHNQRDKLPPWRNMFLQSGFS 483
           K+VL     ++   PW+NM L SGFS
Sbjct: 5   KLVLGRQRLQETTLPWKNMLLSSGFS 82


>TC12650 similar to UP|O23210 (O23210) SCARECROW-like protein, partial (23%)
          Length = 414

 Score = 79.7 bits (195), Expect = 1e-15
 Identities = 48/118 (40%), Positives = 71/118 (59%), Gaps = 6/118 (5%)
 Frame = +2

Query: 176 DQLFKTAELIEAGNPVQAQGILARLNHQL-SPIGNPFQRASFYMKEALQLMLHSNGNNLT 234
           ++L + A+  ++     AQ IL RLN +L SP G P  RA+F+ K+ALQ +L  +G+N T
Sbjct: 62  EELIRAADCFDSNQLQLAQAILERLNQRLRSPSGKPLHRAAFHFKDALQSLL--SGSNRT 235

Query: 235 AFSP-----ISFIFKIGAYKSFSEISPVLQFANFTCNQSLIEALERFDRIHVIDFDIG 287
              P        +  I  +K+FS ISP+  F+ FT NQ+L+EAL     +HV+DF+IG
Sbjct: 236 NAPPRLSSMAEIVQSIRIFKAFSGISPIPMFSIFTTNQALLEALHGSLFMHVVDFEIG 409


>TC11080 similar to UP|Q84TQ7 (Q84TQ7) GIA/RGA-like gibberellin response
           modulator, partial (33%)
          Length = 556

 Score = 77.0 bits (188), Expect = 7e-15
 Identities = 38/103 (36%), Positives = 57/103 (54%)
 Frame = +2

Query: 251 FSEISPVLQFANFTCNQSLIEALERFDRIHVIDFDIGFGVQWSSFMQEIVLRSNGKPSLK 310
           F E  P L+FA+FT NQ+++EA     R+HV+DF +  G+QW + MQ + LR  G P+ +
Sbjct: 185 FYESCPYLKFAHFTANQAILEAFATAGRVHVVDFGLKQGMQWPALMQALALRPGGPPTFR 364

Query: 311 ITAVVSPSSCNEIELNFTQENLSQYAKDLNILFEFNVLNIESL 353
           +T +  P   N   L      L+Q A+ + + FEF      SL
Sbjct: 365 LTGIGPPQPDNSDALQQVGWKLAQLAQTIGVQFEFRGFVCNSL 493


>AV766135 
          Length = 300

 Score = 70.1 bits (170), Expect = 8e-13
 Identities = 26/65 (40%), Positives = 41/65 (63%)
 Frame = -1

Query: 469 KLPPWRNMFLQSGFSPFSFSNFTEAQAECLVQRAPVRGFQVERKPSSLVLCWQRKELISV 528
           ++PPWR  F  +G  P   S F + QAECL+ ++ +RGF V ++ + LVL W  + +++ 
Sbjct: 291 RMPPWREAFYCAGMRPVQLSQFADFQAECLLAKSQIRGFHVAKRQAELVLFWHERAMVAT 112

Query: 529 STWRC 533
           S WRC
Sbjct: 111 SAWRC 97


>AV774473 
          Length = 449

 Score = 69.3 bits (168), Expect = 1e-12
 Identities = 32/92 (34%), Positives = 50/92 (53%)
 Frame = -3

Query: 442 DVLQKIERHYIQPTINKIVLSHHNQRDKLPPWRNMFLQSGFSPFSFSNFTEAQAECLVQR 501
           D  ++IE   ++P   KI  +      + PPWR  F  +G  P   S F + QAECL+ +
Sbjct: 444 DWARRIEMLLLRP---KIFAAVEAAGRRSPPWREAFYGAGMRPVQLSQFADFQAECLLAK 274

Query: 502 APVRGFQVERKPSSLVLCWQRKELISVSTWRC 533
             +RGF V ++ + LVL W  + +++ S WRC
Sbjct: 273 VQIRGFHVAKRQAELVLFWHERAMLATSAWRC 178


>CN825078 
          Length = 650

 Score = 68.2 bits (165), Expect = 3e-12
 Identities = 52/188 (27%), Positives = 83/188 (43%), Gaps = 6/188 (3%)
 Frame = +3

Query: 196 ILARLNHQLSPIGNPFQRASFYMKEALQLMLHSNGNN----LTAFSPISFIFKIGAYKSF 251
           ++ +    +S  G P QR   YM E L     ++GN+    L    P      +   +  
Sbjct: 39  LIEKARSAVSINGEPIQRLGAYMVEGLVARKEASGNSIYHALNCREPEGEEL-LSYMQLL 215

Query: 252 SEISPVLQFANFTCNQSLIEALERFDRIHVIDFDIGFGVQWSSFMQEIVLRSNGKPSLKI 311
            EI P L+F     N ++ EA    DRIH+IDF I  G QW + +Q +  R  G P ++I
Sbjct: 216 FEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGSQWMTLLQALAARPGGAPHVRI 395

Query: 312 TAVVSPSS--CNEIELNFTQENLSQYAKDLNILFEFNVLNIESLNLPSCPLPGHFFDSNE 369
           T +  P S       L+   + L+  ++   I  EF+ + +   ++    L        E
Sbjct: 396 TGIDDPVSKYARGDGLDIVGKRLALMSEKFGIPVEFHGVPVFGPDVTRDMLD---IRPGE 566

Query: 370 AIGVNFPV 377
           A+ VNFP+
Sbjct: 567 ALAVNFPL 590


>TC16366 similar to PIR|E96542|E96542 scarecrow-like protein [imported] -
           Arabidopsis thaliana {Arabidopsis thaliana;}, partial
           (27%)
          Length = 711

 Score = 52.0 bits (123), Expect = 2e-07
 Identities = 34/144 (23%), Positives = 68/144 (46%), Gaps = 6/144 (4%)
 Frame = +3

Query: 395 KQLRPKIVVTLDKNCDRMDVPLPTNVVHVLQCYSALLESLDAVNVNLDVLQ-KIERHYIQ 453
           K L PK+V  +++  +  + P     V  +  Y A+ ES+D V       +  +E+H + 
Sbjct: 6   KCLSPKVVTLVEQEFNTNNAPFLQRFVETMNYYQAVFESIDVVLPREHKERINVEQHCLA 185

Query: 454 PTINKIVLSHHNQR----DKLPPWRNMFLQSGFSPFSFSNFTEAQAECLVQRAPVRG-FQ 508
             +  +V     +R    + L  WR  F  +GF+P+  +++  +  + L++    RG + 
Sbjct: 186 REVVNLVACEGAERVERHELLNKWRMRFASAGFTPYPLNSYINSSIKDLLE--SYRGHYT 359

Query: 509 VERKPSSLVLCWQRKELISVSTWR 532
           +E +  +L L W  + L++   WR
Sbjct: 360 LEERDGALFLGWMNQVLVASCAWR 431


>AV414168 
          Length = 208

 Score = 47.0 bits (110), Expect = 8e-06
 Identities = 20/56 (35%), Positives = 32/56 (56%)
 Frame = +1

Query: 259 QFANFTCNQSLIEALERFDRIHVIDFDIGFGVQWSSFMQEIVLRSNGKPSLKITAV 314
           +F   + N ++ EA++    +H+IDF I  G QW S +Q +  R  G P ++IT V
Sbjct: 4   KFGYMSANGAIAEAMKEEREVHIIDFQISQGTQWVSLIQALAHRPGGPPKVRITGV 171


>AV418844 
          Length = 284

 Score = 43.9 bits (102), Expect = 7e-05
 Identities = 22/72 (30%), Positives = 34/72 (46%), Gaps = 2/72 (2%)
 Frame = +1

Query: 279 IHVIDFDIGFGVQWSSFMQEIVLRSNGKPSLKITAV--VSPSSCNEIELNFTQENLSQYA 336
           +H+IDF I +G QW   ++ +  R  G P L++T +    P       +  T   L  Y 
Sbjct: 16  VHIIDFGICYGFQWPCLIKSLSERHGGPPRLRVTGIELPRPGFRPAERVEETGRRLENYC 195

Query: 337 KDLNILFEFNVL 348
           K   + FE+N L
Sbjct: 196 KKFKVPFEYNCL 231


>AV770800 
          Length = 514

 Score = 43.1 bits (100), Expect = 1e-04
 Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
 Frame = -1

Query: 424 LQCYSALLESLDAVNVNLDVLQKIERHYIQPTINKIVLSHHNQR----DKLPPWRNMFLQ 479
           L  YS + +SL+   V  D  + +   Y+Q  I  +V      R    + L  WR    +
Sbjct: 472 LHYYSTVFDSLEGCPVEPD--KALAEMYLQREICNVVCCEGTARVERHEPLAKWRERLGK 299

Query: 480 SGFSPFSFSNFTEAQAECLVQRAPVRGFQVERKPSSLVLCWQRKELISVSTWR 532
           +GF P    +    QA  L       G+ VE K   L L W  +  ++ S W+
Sbjct: 298 AGFRPVHLGSDAFTQASMLFTLFSSEGYCVEEKEGCLTLGWHSRPPLAASAWQ 140


>TC18636 similar to UP|Q8W584 (Q8W584) AT4g17230/dl4650c, partial (10%)
          Length = 813

 Score = 38.1 bits (87), Expect = 0.004
 Identities = 17/61 (27%), Positives = 29/61 (46%)
 Frame = +1

Query: 473 WRNMFLQSGFSPFSFSNFTEAQAECLVQRAPVRGFQVERKPSSLVLCWQRKELISVSTWR 532
           WR+ F   GF P   S+   A    ++       +++E K  +L L W+ + + + S WR
Sbjct: 109 WRSRFSMXGFVPCPLSSSVTASVRNILNEFN-ENYRLEHKDVALYLTWKNRAMCTASAWR 285

Query: 533 C 533
           C
Sbjct: 286 C 288


>BP044387 
          Length = 378

 Score = 35.0 bits (79), Expect = 0.030
 Identities = 17/65 (26%), Positives = 28/65 (42%)
 Frame = -2

Query: 468 DKLPPWRNMFLQSGFSPFSFSNFTEAQAECLVQRAPVRGFQVERKPSSLVLCWQRKELIS 527
           +KL  W   F  +GF     S F   +   L+      G+++  +   +  CW  + L S
Sbjct: 299 EKLGKWVPRFDSTGFGKVPLSYFGMLKTRRLLPSYGCEGYRMRGENGCVANCWPDRSLFS 120

Query: 528 VSTWR 532
           +S WR
Sbjct: 119 ISAWR 105


>AV421188 
          Length = 199

 Score = 33.5 bits (75), Expect = 0.088
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +2

Query: 291 QWSSFMQEIVLRSNGKPSLKITAV--VSPSSCNEIELNFTQENLSQYAKDLNILFEFNVL 348
           QW   ++ ++ R  G P LKIT +    P       ++ T   L+ Y K  N+ FE+N +
Sbjct: 5   QWPILIKFLLERDGGPPKLKITGIEFPLPGFRPTERIDETGHRLTNYCKRFNVPFEYNAI 184


>TC17852 similar to UP|Q8W4I8 (Q8W4I8) SCARECROW gene regulator, partial
           (26%)
          Length = 456

 Score = 32.7 bits (73), Expect = 0.15
 Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 13/142 (9%)
 Frame = +2

Query: 371 IGVNFPVSSFI---SNPSCFPVALHFLKQLRPKIVVTLDKNCDRMDVPLPTNVVHVLQCY 427
           + VNF +  +      P+    AL   K L+P+IV   +       V   +     L+ +
Sbjct: 2   LAVNFMLQLYNLLDETPTAVETALRLAKSLKPRIVTLGEYEASLTRVGFVSRFKAALKHF 181

Query: 428 SALLESLDAVNVNLDVLQKIE----------RHYIQPTINKIVLSHHNQRDKLPPWRNMF 477
           SAL ESL+  N+  D  ++ +             I P +   V      +++   WR + 
Sbjct: 182 SALFESLEP-NLPSDSPERFQVESLLLGRRIAGVIGPELPGCVRERMEDKEQ---WRVLM 349

Query: 478 LQSGFSPFSFSNFTEAQAECLV 499
              GF   S S++  +QA+ L+
Sbjct: 350 ESCGFESVSLSHYAISQAKILL 415


>BF177544 
          Length = 318

 Score = 32.7 bits (73), Expect = 0.15
 Identities = 20/75 (26%), Positives = 33/75 (43%)
 Frame = +3

Query: 361 PGHFFDSNEAIGVNFPVSSFISNPSCFPVALHFLKQLRPKIVVTLDKNCDRMDVPLPTNV 420
           PG     N A  ++      +S  +     L  +K L PK+V  ++++ +    P     
Sbjct: 48  PGEALVVNFAFQLHHMPDESVSTVNERDQLLRLVKSLNPKLVTVVEQDVNTNTAPFLQRF 227

Query: 421 VHVLQCYSALLESLD 435
           V   + YSA+ ESLD
Sbjct: 228 VEAYKYYSAVFESLD 272


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.320    0.136    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,397,378
Number of Sequences: 28460
Number of extensions: 132617
Number of successful extensions: 1016
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of query: 533
length of database: 4,897,600
effective HSP length: 95
effective length of query: 438
effective length of database: 2,193,900
effective search space: 960928200
effective search space used: 960928200
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)


Medicago: description of AC121238.1