BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149577.7 - phase: 0
(173 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC225842 similar to UP|Q9LW29 (Q9LW29) Transport inhibitor respo... 189 4e-49
BM094881 similar to PIR|T48087|T48 transport inhibitor response ... 174 2e-44
TC234386 similar to PIR|T48087|T48087 transport inhibitor respon... 120 3e-28
TC221662 weakly similar to UP|Q6TDU2 (Q6TDU2) Coronatine-insensi... 114 3e-26
TC234752 weakly similar to UP|Q6TDU2 (Q6TDU2) Coronatine-insensi... 100 3e-22
AW755995 similar to PIR|T48087|T480 transport inhibitor response... 97 3e-21
TC225841 similar to UP|Q9LW29 (Q9LW29) Transport inhibitor respo... 75 2e-14
BE805896 similar to GP|9279671|dbj transport inhibitor response-... 59 1e-09
BM732420 weakly similar to GP|13249030|gb F-box containing prote... 54 5e-08
TC223250 similar to UP|Q6TDU2 (Q6TDU2) Coronatine-insensitive 1,... 47 3e-06
BM521565 similar to PIR|T48087|T48 transport inhibitor response ... 46 8e-06
TC219443 44 3e-05
TC211100 similar to GB|AAM91352.1|22137014|AY133522 At5g23340/MK... 42 1e-04
BG726934 37 0.006
BF010034 similar to GP|13605655|gb| AT4g15470/dl3775w {Arabidops... 35 0.014
AI855596 similar to GP|30013671|gb Avr9/Cf-9 rapidly elicited pr... 33 0.067
BM094601 32 0.15
TC205465 weakly similar to GB|AAP42752.1|30984578|BT008739 At1g5... 32 0.20
TC221798 32 0.20
TC234799 31 0.26
>TC225842 similar to UP|Q9LW29 (Q9LW29) Transport inhibitor response-like
protein (At3g26830), partial (54%)
Length = 1777
Score = 189 bits (481), Expect = 4e-49
Identities = 90/163 (55%), Positives = 120/163 (73%)
Frame = +1
Query: 11 ESQGEKNNNMDSNSDFPDEVLERVLGMMKSRKDRSSVSLVCKEWYNAERWSRRNVFIGNC 70
E + EK M+ FPDEV+E + + S DR+++SLVCK WY ER +R+ VFIGNC
Sbjct: 649 EKRREKKKMMNY---FPDEVIEHIFDYVVSHSDRNALSLVCKSWYRIERCTRQRVFIGNC 819
Query: 71 YAVSPEILTRRFPNIRSVTMKGKPRFSDFNLVPANWGADIHSWLVVFADKYPFLEELRLK 130
Y+++PE L +RFP ++S+T+KGKP F+DF+LVP +WG +H W+ A LEELRLK
Sbjct: 820 YSITPERLIQRFPGLKSLTLKGKPHFADFSLVPYDWGGFVHPWVEALAKSRVGLEELRLK 999
Query: 131 RMAVSDESLEFLAFSFPNFKALSLLSCDGFSTDGLAAVATNCK 173
RM VSDESLE L+ SF +FK+L L+SC+GFSTDGLAA+A NC+
Sbjct: 1000RMVVSDESLELLSRSFTHFKSLVLVSCEGFSTDGLAALAANCR 1128
>BM094881 similar to PIR|T48087|T48 transport inhibitor response protein TIR1
[imported] - Arabidopsis thaliana, partial (23%)
Length = 420
Score = 174 bits (440), Expect = 2e-44
Identities = 75/125 (60%), Positives = 94/125 (75%)
Frame = +1
Query: 49 LVCKEWYNAERWSRRNVFIGNCYAVSPEILTRRFPNIRSVTMKGKPRFSDFNLVPANWGA 108
LVCK WY ERW RR VF+GNCYAVSP + RFP +RS+ +KGKP F+DFNLVP WGA
Sbjct: 1 LVCKSWYEIERWCRRRVFVGNCYAVSPATVVNRFPKVRSIAIKGKPHFADFNLVPEGWGA 180
Query: 109 DIHSWLVVFADKYPFLEELRLKRMAVSDESLEFLAFSFPNFKALSLLSCDGFSTDGLAAV 168
+ W+ A YP+L+E+RLKRM ++DE LE +A SF NF+ L L SC+GF+TDGLAA+
Sbjct: 181 YVGPWIKAMAAAYPWLQEIRLKRMVIADECLELIAKSFKNFQVLVLTSCEGFTTDGLAAI 360
Query: 169 ATNCK 173
A NC+
Sbjct: 361 AANCR 375
>TC234386 similar to PIR|T48087|T48087 transport inhibitor response protein
TIR1 [imported] - Arabidopsis thaliana {Arabidopsis
thaliana;} , partial (14%)
Length = 467
Score = 120 bits (301), Expect = 3e-28
Identities = 49/82 (59%), Positives = 64/82 (77%)
Frame = +1
Query: 26 FPDEVLERVLGMMKSRKDRSSVSLVCKEWYNAERWSRRNVFIGNCYAVSPEILTRRFPNI 85
FP+EVLE V + + +DR+++SLVCK WY ERW RR VF+GNCYAVSP ++ +RFP +
Sbjct: 220 FPEEVLEHVFSFIWNERDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPLMVVKRFPEV 399
Query: 86 RSVTMKGKPRFSDFNLVPANWG 107
RS+ +KGKP F+DFNLVP WG
Sbjct: 400 RSIALKGKPHFADFNLVPDGWG 465
>TC221662 weakly similar to UP|Q6TDU2 (Q6TDU2) Coronatine-insensitive 1,
partial (44%)
Length = 993
Score = 114 bits (284), Expect = 3e-26
Identities = 58/147 (39%), Positives = 87/147 (58%), Gaps = 1/147 (0%)
Frame = +2
Query: 28 DEVLERVLGMMKSRKDRSSVSLVCKEWYNAERWSRRNVFIGNCYAVSPEILTRRFPNIRS 87
D VL+ V+ + KDR +VS VC+ Y + +R++V I CY +P+ L RRFP++ S
Sbjct: 68 DVVLDCVMPYIHDSKDRDAVSQVCRRLYELDSLTRKHVTIALCYTTTPDRLRRRFPHLES 247
Query: 88 VTMKGKPRFSDFNLVPANWGADIHSWLVVFADKYPFLEELRLKRMAVSDESLEFLAFSFP 147
+ +KGKPR + FNL+P +WG + W+ + + L+ L +RM V D L+ LA S
Sbjct: 248 LNLKGKPRAAMFNLIPEDWGGFVTPWVREISQYFDCLKSLHFRRMIVRDSDLQVLARSRG 427
Query: 148 N-FKALSLLSCDGFSTDGLAAVATNCK 173
+ +AL L C GFSTDGL + C+
Sbjct: 428 HILQALKLDKCSGFSTDGLYYIGRYCR 508
>TC234752 weakly similar to UP|Q6TDU2 (Q6TDU2) Coronatine-insensitive 1,
partial (25%)
Length = 502
Score = 100 bits (250), Expect = 3e-22
Identities = 54/146 (36%), Positives = 81/146 (54%), Gaps = 1/146 (0%)
Frame = +2
Query: 28 DEVLERVLGMMKSRKDRSSVSLVCKEWYNAERWSRRNVFIGNCYAVSPEILTRRFPNIRS 87
D VL+ V+ + KDR +VS VC+ WY + +R++V I CY +P L RRFP++ S
Sbjct: 47 DVVLDCVIPYIDDPKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPARLRRRFPHLES 226
Query: 88 VTMKGKPRFSDFNLVPANWGADIHSWLVVFADKYPFLEELRLKRMAVSDESLEFLAFSFP 147
+ +KGKPR + FNL+P +WG + W+ + + L+ L +RM V D L+ LA
Sbjct: 227 LKLKGKPRAAMFNLIPEDWGGHVTPWVKEISQYFDCLKSLHFRRMIVKDSDLQNLARDRG 406
Query: 148 N-FKALSLLSCDGFSTDGLAAVATNC 172
+ AL L +TDGL + C
Sbjct: 407 HMLHALKLD*SS*STTDGLFHICRFC 484
>AW755995 similar to PIR|T48087|T480 transport inhibitor response protein
TIR1 [imported] - Arabidopsis thaliana, partial (12%)
Length = 292
Score = 97.4 bits (241), Expect = 3e-21
Identities = 42/89 (47%), Positives = 61/89 (68%)
Frame = +2
Query: 26 FPDEVLERVLGMMKSRKDRSSVSLVCKEWYNAERWSRRNVFIGNCYAVSPEILTRRFPNI 85
FP+EVLE V + S +DR+++SLVCK WY +RW RR VF GNCYAVSP + +RFP +
Sbjct: 26 FPEEVLEHVFSFIWSERDRNAISLVCKSWYEIDRWCRRKVFEGNCYAVSPLMGIKRFPEL 205
Query: 86 RSVTMKGKPRFSDFNLVPANWGADIHSWL 114
+S+ + KP +D +L+ + G ++WL
Sbjct: 206 KSIVLIRKPHLADLHLITNSGGEYGYTWL 292
>TC225841 similar to UP|Q9LW29 (Q9LW29) Transport inhibitor response-like
protein (At3g26830), partial (10%)
Length = 848
Score = 74.7 bits (182), Expect = 2e-14
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +2
Query: 26 FPDEVLERVLGMMKSRKDRSSVSLVCKEWYNAERWSRRNVFIGNCYAVSPEILTRRF 82
FPDEV+E + + S DR+++SLVCK WY ER +R+ VFIGNCY+++PE L +RF
Sbjct: 677 FPDEVIEHIFDYVVSHSDRNALSLVCKSWYRIERCTRQRVFIGNCYSITPERLIQRF 847
>BE805896 similar to GP|9279671|dbj transport inhibitor response-like protein
{Arabidopsis thaliana}, partial (23%)
Length = 420
Score = 58.9 bits (141), Expect = 1e-09
Identities = 26/40 (65%), Positives = 35/40 (87%)
Frame = +2
Query: 134 VSDESLEFLAFSFPNFKALSLLSCDGFSTDGLAAVATNCK 173
V+D+SLE L+ SF NFK+L L+SC+GF+TDGLAA+A NC+
Sbjct: 2 VTDKSLELLSRSFMNFKSLVLVSCEGFTTDGLAAIAANCR 121
>BM732420 weakly similar to GP|13249030|gb F-box containing protein TIR1
{Populus tremula x Populus tremuloides}, partial (19%)
Length = 425
Score = 53.5 bits (127), Expect = 5e-08
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = +3
Query: 124 LEELRLKRMAVSDESLEFLAFSFPNFKALSLLSCDGFSTDGLAAVATNCK 173
L +L LKRM+++D L L+ S P+F+ L L C+GF T LAA+A+NC+
Sbjct: 21 LNKLHLKRMSLTDHDLTLLSHSLPSFQDLLLTCCEGFGTTALAALASNCR 170
>TC223250 similar to UP|Q6TDU2 (Q6TDU2) Coronatine-insensitive 1, partial
(15%)
Length = 481
Score = 47.4 bits (111), Expect = 3e-06
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 99 FNLVPANWGADIHSWLVVFADKYPFLEELRLKRMAVSDESLEFLAFSFPN-FKALSLLSC 157
F+L+P +WG + W+ + + L+ L +RM V D L+ LA + AL L C
Sbjct: 110 FSLIPEDWGEHVSPWVKEISQYFDCLKSLHFRRMIVKDSDLQNLARDRGHVLHALKLDKC 289
Query: 158 DGFSTDGLAAVATNC 172
F+TDGL + C
Sbjct: 290 FSFTTDGLFHIGRFC 334
>BM521565 similar to PIR|T48087|T48 transport inhibitor response protein TIR1
[imported] - Arabidopsis thaliana, partial (23%)
Length = 428
Score = 46.2 bits (108), Expect = 8e-06
Identities = 19/28 (67%), Positives = 23/28 (81%)
Frame = +2
Query: 146 FPNFKALSLLSCDGFSTDGLAAVATNCK 173
F NFK L L SC+GF+TDGLAA+A NC+
Sbjct: 2 FKNFKVLVLTSCEGFTTDGLAAIAANCR 85
>TC219443
Length = 939
Score = 44.3 bits (103), Expect = 3e-05
Identities = 46/165 (27%), Positives = 72/165 (42%), Gaps = 4/165 (2%)
Frame = +3
Query: 13 QGEKNNNMDSNSDFPDEVLERVLGMMKSRKDRSSVSLVCKEWYNAERWSRRNVFIGNCYA 72
+GEK MD+ P+ ++ +L +K DR+SVSLVCK Y + R V +G
Sbjct: 327 RGEKR--MDN---IPEHIVWEILSRLKKTSDRNSVSLVCKRLYYLDNAQRTFVRVGCGMD 491
Query: 73 VSPEILT---RRFPNIRSVTMKGKPRFSDFNLVPANWGADIHSWLVVFADKYPFLEELRL 129
+ E LT RF N+ V + S + G L++ A+ P L +L L
Sbjct: 492 PADEALTCLCTRFQNLSKVEITYSGWMSKLGKQLDDKG------LLILANHCPLLCDLSL 653
Query: 130 KRMA-VSDESLEFLAFSFPNFKALSLLSCDGFSTDGLAAVATNCK 173
++D L +LA S +L L + G+ ++ CK
Sbjct: 654 SYCTFITDVGLRYLA-SSSKLSSLRLNFTPRITGCGILSLVVGCK 785
>TC211100 similar to GB|AAM91352.1|22137014|AY133522 At5g23340/MKD15_20
{Arabidopsis thaliana;} , partial (61%)
Length = 815
Score = 42.0 bits (97), Expect = 1e-04
Identities = 33/151 (21%), Positives = 60/151 (38%), Gaps = 1/151 (0%)
Frame = +1
Query: 23 NSDFPDEVLERVLGMMKSRKDRSSVSLVCKEWYNAERWSRRNVFIGNCYAVSPEILTRRF 82
N D+ L +LG ++S KD+ + LVCK W + R+ + P +L +
Sbjct: 79 NDVLRDDELRSILGRVESEKDKETFGLVCKRWLRLQSTERKKL----AARAGPHMLRKMA 246
Query: 83 PNIRSVTMKGKPRFSDFNLVPANWGADIHSWLVVFADKYPFLEELRLKR-MAVSDESLEF 141
+ + + P +D L V A + L+ L L ++D ++
Sbjct: 247 DRFTRLVELDLAKSVSRSFYPGVTDSD----LAVIATAFTCLKILNLHNCKGITDAGMKA 414
Query: 142 LAFSFPNFKALSLLSCDGFSTDGLAAVATNC 172
+ ++L + C + GL+AVA C
Sbjct: 415 IGEHLSLLQSLDVSYCRKLTDKGLSAVAKGC 507
>BG726934
Length = 387
Score = 36.6 bits (83), Expect = 0.006
Identities = 23/64 (35%), Positives = 34/64 (52%), Gaps = 1/64 (1%)
Frame = +3
Query: 28 DEVLERVLGMMK-SRKDRSSVSLVCKEWYNAERWSRRNVFIGNCYAVSPEILTRRFPNIR 86
DE+L R+L + S + R+S SLVCK W N + R + + + V L RFPN+
Sbjct: 120 DELLLRILSKLPDSSQQRNSNSLVCKRWLNLQGRLVRTLRVLDWSFVLSGRLINRFPNLN 299
Query: 87 SVTM 90
V +
Sbjct: 300 HVDL 311
>BF010034 similar to GP|13605655|gb| AT4g15470/dl3775w {Arabidopsis
thaliana}, partial (7%)
Length = 338
Score = 35.4 bits (80), Expect = 0.014
Identities = 17/53 (32%), Positives = 26/53 (48%)
Frame = +2
Query: 23 NSDFPDEVLERVLGMMKSRKDRSSVSLVCKEWYNAERWSRRNVFIGNCYAVSP 75
N+ PDE+L + + S+ R + SLVC W ER++R + SP
Sbjct: 113 NTLIPDELLIEIFRRLDSKSSRDAGSLVCTRWLRLERFTRAAISSPRVSPTSP 271
>AI855596 similar to GP|30013671|gb Avr9/Cf-9 rapidly elicited protein 189
{Nicotiana tabacum}, partial (21%)
Length = 415
Score = 33.1 bits (74), Expect = 0.067
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 130 KRMAVSDESLEFLAFSFPNFKALSLLSCDGFSTDGLAAVATNCK 173
+ +++SD++L ++ PN L L +C + G+ A A NCK
Sbjct: 90 RSVSISDDALVLISQRCPNLTRLKLRACRALTDAGMEAFAKNCK 221
>BM094601
Length = 429
Score = 32.0 bits (71), Expect = 0.15
Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 4/149 (2%)
Frame = +3
Query: 28 DEVLERVLGMMKSRKDRSSVSLVCKEWYNAERWSRRNVFIGNCYAVSPEILTRRFPNIRS 87
DE+L+ + + S SSVSLVCK W R S ++ ++R
Sbjct: 27 DELLQEIFQKLPSSSS-SSVSLVCKRWLRLHRSSTTSL------------------SLRL 149
Query: 88 VTMKGKPRFSDFNLVPANWGADIHSWLVVFADKYPFLEELRLK----RMAVSDESLEFLA 143
T P FS L+P+ L F +PFL L L ++S L +
Sbjct: 150 TT----PHFS---LIPS---------LSSFLSHHPFLSSLSLSLSPPLFSLSPHLLSLII 281
Query: 144 FSFPNFKALSLLSCDGFSTDGLAAVATNC 172
F N +LSL S L +++ +C
Sbjct: 282 SPFSNLLSLSLTPAP-VSLSSLLSLSASC 365
>TC205465 weakly similar to GB|AAP42752.1|30984578|BT008739 At1g57790
{Arabidopsis thaliana;} , partial (15%)
Length = 490
Score = 31.6 bits (70), Expect = 0.20
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 3 MVECKRKKESQGEKNNNMDSNSDFPDEVLERVLGMMKSRKDRSSVSLVCKEWYN 56
+ + +R +N + + SD P E+LE +L + S D S+VCK W++
Sbjct: 117 ITDSRRAAVEVENENLELQTWSDLPTELLELILSRL-SLDDNVRASVVCKRWHS 275
>TC221798
Length = 606
Score = 31.6 bits (70), Expect = 0.20
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 123 FLEELRLKR-MAVSDESLEFLAFSFPNFKALSLLSCDGFSTDGLAAVATNCK 173
+LE L L R +SDE L+ ++ FP L L C G S DGL + + K
Sbjct: 74 YLESLELVRCQEISDEGLQLVS-QFPRLCILRLSKCLGISDDGLKPLVGSLK 226
>TC234799
Length = 743
Score = 31.2 bits (69), Expect = 0.26
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 123 FLEELRL-KRMAVSDESLEFLAFSFPNFKALSLLSCDGFSTDGLAAVATNCK 173
+LE L L K +SDE L+ ++ FP L L C G S DGL + + K
Sbjct: 310 YLESLELVKCQEISDEGLQLVS-QFPRLCILRLSKCLGISDDGLKPLVGSLK 462
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.320 0.134 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,126,744
Number of Sequences: 63676
Number of extensions: 102381
Number of successful extensions: 602
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of query: 173
length of database: 12,639,632
effective HSP length: 91
effective length of query: 82
effective length of database: 6,845,116
effective search space: 561299512
effective search space used: 561299512
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Medicago: description of AC149577.7