BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149546.4 - phase: 0
(182 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AI441516 98 2e-21
TC224876 weakly similar to UP|Q39835 (Q39835) Extensin, partial ... 45 1e-05
BI892521 similar to PIR|T03236|T032 extensin precursor - common ... 45 2e-05
TC225027 similar to UP|Q39835 (Q39835) Extensin, partial (49%) 42 2e-04
TC224768 similar to UP|Q39835 (Q39835) Extensin, partial (33%) 41 4e-04
CF922495 41 4e-04
TC215091 UP|CUT2_CAEEL (P34682) Cuticlin 2 precursor, partial (10%) 40 5e-04
TC219248 weakly similar to UP|Q95JD1 (Q95JD1) Basic proline-rich... 40 8e-04
CF922281 40 8e-04
BI972004 similar to PIR|T10863|T10 extensin precursor - kidney b... 39 0.001
TC230183 homologue to UP|GLHR_ANTEL (P35409) Probable glycoprote... 39 0.001
TC229391 weakly similar to UP|Q00484 (Q00484) Mini-collagen prec... 39 0.001
TC225011 similar to UP|Q09083 (Q09083) Hydroxyproline-rich glyco... 39 0.002
AW311078 similar to GP|13872979|dbj P0702B09.13 {Oryza sativa (j... 39 0.002
CK606365 39 0.002
TC224979 similar to UP|Q09083 (Q09083) Hydroxyproline-rich glyco... 38 0.003
CF921965 38 0.003
TC215092 weakly similar to UP|Q9RB08 (Q9RB08) Outer membrane lip... 37 0.004
TC211031 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 37 0.004
AI443498 36 0.009
>AI441516
Length = 244
Score = 97.8 bits (242), Expect = 2e-21
Identities = 44/51 (86%), Positives = 45/51 (87%)
Frame = +2
Query: 1 MRGGHYAASRGGAPFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQF 51
+RGGHYA SRG A FAGPS YHDRAWYGIPDGGP EPIPPRRPYSPGGQF
Sbjct: 50 VRGGHYACSRGAA-FAGPSIPYHDRAWYGIPDGGPSEPIPPRRPYSPGGQF 199
Score = 83.6 bits (205), Expect = 5e-17
Identities = 38/50 (76%), Positives = 39/50 (78%)
Frame = +2
Query: 89 PRRPYSPGGQFYRIPDGGPGEPIPLRRPYSPGGQFDMPFMGRHVDDPYLY 138
P PY +Y IPDGGP EPIP RRPYSPGGQFDMPFMGRH DDPYLY
Sbjct: 98 PSIPYHDRA-WYGIPDGGPSEPIPPRRPYSPGGQFDMPFMGRHFDDPYLY 244
>TC224876 weakly similar to UP|Q39835 (Q39835) Extensin, partial (66%)
Length = 1340
Score = 45.4 bits (106), Expect = 1e-05
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Frame = +1
Query: 14 PFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPY---- 69
P+ PS + +Y P P P PP++PY +Y P P P PP++PY
Sbjct: 187 PYHYPSPPPPPKYYYHSPP--PPSPSPPKKPY-----YYHSPP--PPSPTPPKKPYYYHS 339
Query: 70 ----SPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIPLRRPY 117
P + Y P P PP++PY +Y P P P P ++PY
Sbjct: 340 PPPPPPKKKPYYYHSPPPPSPPPPKKPY-----YYHSPP--PPSPSPPKKPY 474
Score = 29.6 bits (65), Expect = 0.82
Identities = 30/107 (28%), Positives = 37/107 (34%), Gaps = 3/107 (2%)
Frame = +3
Query: 14 PFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPY---SPGGQFYGIPDGGPGEPIPPRRPYS 70
P P H H P P P PP++PY SP + P P PP YS
Sbjct: 882 PHPHPHPHPHPHPHPHPPYVYPSPPPPPKKPYKYPSPPPPVHHYP-----HPHPPFVHYS 1046
Query: 71 PGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIPLRRPY 117
P P P++P Y+ P P P P +PY
Sbjct: 1047P--------------PPSPKKP-------YKYP--SPPPPPPTNKPY 1118
>BI892521 similar to PIR|T03236|T032 extensin precursor - common tobacco,
partial (30%)
Length = 426
Score = 45.1 bits (105), Expect = 2e-05
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +3
Query: 35 PIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPY- 93
P P PP++PY +Y P P P PP++PY +Y P P P PP++PY
Sbjct: 51 PPSPPPPKKPY-----YYHSPP--PPSPPPPKKPY-----YYHSPP--PPSPPPPKKPYY 188
Query: 94 -----SPGGQFYRIPDGGPGEPIPLRRPY 117
P +Y P P P ++PY
Sbjct: 189 YHSPPPPKKPYYYHSPPPPSPPPPYKKPY 275
Score = 43.1 bits (100), Expect = 7e-05
Identities = 28/80 (35%), Positives = 39/80 (48%)
Frame = +3
Query: 38 PIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGG 97
P PP++PY +Y P P P PP++PY +Y P P P PP++PY
Sbjct: 9 PPPPKKPY-----YYHSPP--PPSPPPPKKPY-----YYHSPP--PPSPPPPKKPY---- 134
Query: 98 QFYRIPDGGPGEPIPLRRPY 117
+Y P P P P ++PY
Sbjct: 135 -YYHSPP--PPSPPPPKKPY 185
>TC225027 similar to UP|Q39835 (Q39835) Extensin, partial (49%)
Length = 747
Score = 41.6 bits (96), Expect = 2e-04
Identities = 30/86 (34%), Positives = 40/86 (45%), Gaps = 3/86 (3%)
Frame = +2
Query: 35 PIEPIPPRRPY---SPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRR 91
P P PP++PY SP Y P P PP++PY +Y P P P PP++
Sbjct: 191 PPSPSPPKKPYYYHSPPPP-YKKPYYYHSPPPPPKKPY-----YYHSPP--PPSPPPPKK 346
Query: 92 PYSPGGQFYRIPDGGPGEPIPLRRPY 117
PY +Y P P P P ++PY
Sbjct: 347 PY-----YYHSPP-PPSPPPPYKKPY 406
Score = 35.4 bits (80), Expect = 0.015
Identities = 33/135 (24%), Positives = 49/135 (35%), Gaps = 23/135 (17%)
Frame = +2
Query: 38 PIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPI---------P 88
P PP++PY +Y P P P PP++PY ++ P P P P
Sbjct: 278 PPPPKKPY-----YYHSPP--PPSPPPPKKPY----YYHSPPPPSPPPPYKKPYYYHSPP 424
Query: 89 PRRPYSPGGQFYRIPD-----------GGPGEPIPLRRPY---SPGGQFDMPFMGRHVDD 134
P P P ++ P P P P ++PY SP P H
Sbjct: 425 PP*PPPPKPYYHHSPPPPPPKKKPYYYHSPPPPPPKKKPYYYHSPPPPHPYPHPHPHPHP 604
Query: 135 PYLYDDNMRGIKRPF 149
P+++ K+P+
Sbjct: 605 PFVHYSPPPSPKKPY 649
>TC224768 similar to UP|Q39835 (Q39835) Extensin, partial (33%)
Length = 483
Score = 40.8 bits (94), Expect = 4e-04
Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 13/96 (13%)
Frame = +3
Query: 35 PIEPIPPRRPY------SPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIP 88
P P PP++PY P +Y P P P ++PY +Y P P P P
Sbjct: 159 PPSPPPPKKPYYYHSPPPPKKPYYYHSPPPPSPPPPYKKPY-----YYHSPP--PPSPPP 317
Query: 89 PRRPY-------SPGGQFYRIPDGGPGEPIPLRRPY 117
P++PY P +Y P P P ++PY
Sbjct: 318 PKKPYYYHSPPPPPKKPYYYHSPPPPSPPPPYKKPY 425
>CF922495
Length = 427
Score = 40.8 bits (94), Expect = 4e-04
Identities = 33/93 (35%), Positives = 46/93 (48%), Gaps = 7/93 (7%)
Frame = +1
Query: 37 EPIPPRRPYSPGGQFYGIPDGGPGEPIPP---RRPYSPGGQFYGIPDGGPGEPIPPRRPY 93
+P PPR PG Q P GGP + PP ++ +PGG + GGPG P +
Sbjct: 85 DPPPPRG--FPGNQKGATPGGGPPKKAPPGGGQKGKNPGGI---LKRGGPGVKNPGGKI* 249
Query: 94 SPGG----QFYRIPDGGPGEPIPLRRPYSPGGQ 122
GG +F+R P GG G+ + P +PGG+
Sbjct: 250 KRGGGEKQKFWRGPWGGGGKKM---GPKNPGGK 339
Score = 32.0 bits (71), Expect = 0.17
Identities = 27/80 (33%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Frame = -1
Query: 38 PIPPRRPYS----PGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGP--GEPIPPRR 91
P PPR P P F+ G P PP + PG +G P GG G P PP
Sbjct: 304 PPPPRGPAKIFVFPPPPFFKFSPPGFLPPAPPFLKFPPGFSLFGPPQGGLFWGGP-PPGW 128
Query: 92 PYSPGGQFYRIPDGGPGEPI 111
P P G PG P+
Sbjct: 127 P----------PFGFPGNPL 98
Score = 30.0 bits (66), Expect = 0.63
Identities = 20/51 (39%), Positives = 23/51 (44%)
Frame = -1
Query: 34 GPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPG 84
G + P PP + PG +G P GG PP P P F G P GG G
Sbjct: 232 GFLPPAPPFLKFPPGFSLFGPPQGGLFWGGPP--PGWPPFGFPGNPLGGGG 86
>TC215091 UP|CUT2_CAEEL (P34682) Cuticlin 2 precursor, partial (10%)
Length = 913
Score = 40.4 bits (93), Expect = 5e-04
Identities = 34/105 (32%), Positives = 41/105 (38%), Gaps = 7/105 (6%)
Frame = +1
Query: 12 GAPFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSP 71
G P AGP R I GP + PPR P + + GP + PPR P +
Sbjct: 478 GPPKAGPPRA-------PITTSGPPKAGPPRAPVTASEPESPVTPSGPPKAGPPRAPITT 636
Query: 72 GGQFYGIPD------GGPGEPIPPRRPYSPGG-QFYRIPDGGPGE 109
G P GP + PPR P G +FY D G GE
Sbjct: 637 SGPPKAGPPRAPITTSGPPKAGPPRAPVITSG*KFY*ARD*GKGE 771
Score = 38.5 bits (88), Expect = 0.002
Identities = 32/113 (28%), Positives = 40/113 (35%)
Frame = +1
Query: 9 SRGGAPFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRP 68
S G AGP R I GP + PPR P + I P P+ P P
Sbjct: 325 STSGPLKAGPPRAL-------ITTSGPPKAGPPRAPVTASEPEPPITASEPEPPVTPLGP 483
Query: 69 YSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIPLRRPYSPGG 121
G I GP + PPR P + + GP + P R P + G
Sbjct: 484 PKAGPPRAPITTSGPPKAGPPRAPVTASEPESPVTPSGPPKAGPPRAPITTSG 642
Score = 35.0 bits (79), Expect = 0.020
Identities = 26/86 (30%), Positives = 30/86 (34%)
Frame = +1
Query: 31 PDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPR 90
P G P PI P G I GP + PPR P + I P P+ P
Sbjct: 298 PSGPPRAPISTSGPLKAGPPRALITTSGPPKAGPPRAPVTASEPEPPITASEPEPPVTPL 477
Query: 91 RPYSPGGQFYRIPDGGPGEPIPLRRP 116
P G I GP + P R P
Sbjct: 478 GPPKAGPPRAPITTSGPPKAGPPRAP 555
Score = 33.5 bits (75), Expect = 0.057
Identities = 32/107 (29%), Positives = 39/107 (35%), Gaps = 2/107 (1%)
Frame = +1
Query: 12 GAPFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQFYGI-PDGGPGEPIPPRRPYS 70
G P AGP R I GP + PP+ P + + P G P PI P
Sbjct: 187 GPPKAGPPRAL-------ITTSGPPKAGPPKAPVTASEPEPPVTPSGPPRAPISTSGPLK 345
Query: 71 PGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPI-PLRRP 116
G I GP + PPR P + I P P+ PL P
Sbjct: 346 AGPPRALITTSGPPKAGPPRAPVTASEPEPPITASEPEPPVTPLGPP 486
Score = 31.2 bits (69), Expect = 0.28
Identities = 24/83 (28%), Positives = 30/83 (35%), Gaps = 1/83 (1%)
Frame = +1
Query: 35 PIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGI-PDGGPGEPIPPRRPY 93
P P+ P P G I GP + PP+ P + + P G P PI P
Sbjct: 163 PEPPVTPSGPPKAGPPRALITTSGPPKAGPPKAPVTASEPEPPVTPSGPPRAPISTSGPL 342
Query: 94 SPGGQFYRIPDGGPGEPIPLRRP 116
G I GP + P R P
Sbjct: 343 KAGPPRALITTSGPPKAGPPRAP 411
Score = 26.2 bits (56), Expect = 9.1
Identities = 18/63 (28%), Positives = 23/63 (35%), Gaps = 1/63 (1%)
Frame = +1
Query: 59 PGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRI-PDGGPGEPIPLRRPY 117
P P+ P P G I GP + PP+ P + + P G P PI P
Sbjct: 163 PEPPVTPSGPPKAGPPRALITTSGPPKAGPPKAPVTASEPEPPVTPSGPPRAPISTSGPL 342
Query: 118 SPG 120
G
Sbjct: 343 KAG 351
>TC219248 weakly similar to UP|Q95JD1 (Q95JD1) Basic proline-rich protein,
partial (11%)
Length = 450
Score = 39.7 bits (91), Expect = 8e-04
Identities = 34/113 (30%), Positives = 42/113 (37%)
Frame = +1
Query: 5 HYAASRGGAPFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIP 64
H+ +R PFA P ++ GP +P PP GP +P P
Sbjct: 100 HHEDTRLHKPFAHPPKN----------PSGPKKPGPP----------------GPKKPGP 201
Query: 65 PRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIPLRRPY 117
PR PG G G PG P P +P PG G PG P P+ Y
Sbjct: 202 PRPGPQPGPPGPGPHPGPPGPPPPGPQPGPPG-------PGPPGPPGPMLTGY 339
Score = 36.6 bits (83), Expect = 0.007
Identities = 27/73 (36%), Positives = 31/73 (41%)
Frame = -2
Query: 33 GGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRP 92
GGP P P + PGG G P GPG PGG +G GGPG
Sbjct: 317 GGPGGPGPGGPGWGPGGGGPGGPGWGPG----------PGGPGWGPGLGGPGF------- 189
Query: 93 YSPGGQFYRIPDG 105
+ PGG + PDG
Sbjct: 188 FGPGGPGFFGPDG 150
Score = 27.3 bits (59), Expect = 4.1
Identities = 21/56 (37%), Positives = 23/56 (40%), Gaps = 2/56 (3%)
Frame = -2
Query: 68 PYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIPLRRP--YSPGG 121
P PGG G P GPG PGG + GGPG L P + PGG
Sbjct: 320 PGGPGGPGPGGPGWGPGGG-------GPGGPGWGPGPGGPGWGPGLGGPGFFGPGG 174
>CF922281
Length = 520
Score = 39.7 bits (91), Expect = 8e-04
Identities = 26/67 (38%), Positives = 33/67 (48%), Gaps = 12/67 (17%)
Frame = +2
Query: 38 PIPPRRPYSPGGQFYGIPDGGPGEPI-------PPRRPYSPGG---QF--YGIPDGGPGE 85
P PP++ G + P GGP P+ PP++P PGG QF G P G GE
Sbjct: 281 PPPPKKNTKIGFPNFKAPGGGPNPPLGWEIKKKPPKKP--PGGPPPQFGSKGDPPPGGGE 454
Query: 86 PIPPRRP 92
P PP+ P
Sbjct: 455 PPPPKNP 475
Score = 31.6 bits (70), Expect = 0.22
Identities = 29/103 (28%), Positives = 36/103 (34%), Gaps = 23/103 (22%)
Frame = +2
Query: 44 PYSPGGQFYGIPDGGPGEP---------------IPPRRPYSPGGQFYGIPDGGPGEPIP 88
P SP G P GG P R+ P G F G G G P P
Sbjct: 113 PPSPNGNPPPPPKGGEKPPPQGKKTLGKKKKKGLCKTRKTEKPMGPF-GRGRGQKGAPPP 289
Query: 89 PRRPYSPGGQFYRIPDGGPGEPI--------PLRRPYSPGGQF 123
P++ G ++ P GGP P+ P + P P QF
Sbjct: 290 PKKNTKIGFPNFKAPGGGPNPPLGWEIKKKPPKKPPGGPPPQF 418
Score = 30.0 bits (66), Expect = 0.63
Identities = 34/113 (30%), Positives = 42/113 (37%), Gaps = 24/113 (21%)
Frame = +3
Query: 2 RGGHYAASRGGAP--------FAGPSRHYHDRAWYGIPDGGPIEPIPPRRPYSP------ 47
+GG RG P FA P + + W + GG PP +P
Sbjct: 150 KGGKNPPPRGKKPWEKKKKKGFAKPGKRKNQ--WDPLEGGGAKRGPPPPLKKTPKLAFPI 323
Query: 48 -----GGQFYGIPDGGPGEPIPPRRPYSPGG-----QFYGIPDGGPGEPIPPR 90
GGQ P GG + PP+ P PGG GIP G G P PP+
Sbjct: 324 LRPPGGGQTP--PWGGK*KKNPPKNP--PGGPPPNLDPKGIPPRGGGNPPPPK 470
Score = 28.5 bits (62), Expect = 1.8
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 13/84 (15%)
Frame = -3
Query: 33 GGPIEPIPPRRPY-------SPGGQFYGI------PDGGPGEPIPPRRPYSPGGQFYGIP 79
GG + P P P +P G F+G+ P GG PPR P + QF+
Sbjct: 464 GGGVPPPPGGDPLWIQIGGGAPRGVFWGVFFLFPTPGGGLA---PPRGP*NWESQFWCFF 294
Query: 80 DGGPGEPIPPRRPYSPGGQFYRIP 103
GG G P P SP F R+P
Sbjct: 293 *GGGGPPFGP----SP---FQRVP 243
>BI972004 similar to PIR|T10863|T10 extensin precursor - kidney bean, partial
(17%)
Length = 421
Score = 39.3 bits (90), Expect = 0.001
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Frame = +1
Query: 38 PIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPY---- 93
P PP++PY +Y P P P P ++PY +Y P P P PP++PY
Sbjct: 43 PPPPKKPY-----YYHSPPP-PSPPPPYKKPY-----YYHSPP--PPSPPPPKKPYYYHS 183
Query: 94 ---SPGGQFYRIPDGGPGEPIPLRRPY 117
P +Y P P P ++PY
Sbjct: 184 PPPPPKKPYYYHSPPPPSPPPPYKKPY 264
>TC230183 homologue to UP|GLHR_ANTEL (P35409) Probable glycoprotein hormone
G-protein coupled receptor precursor, partial (6%)
Length = 878
Score = 39.3 bits (90), Expect = 0.001
Identities = 32/105 (30%), Positives = 42/105 (39%)
Frame = -1
Query: 31 PDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPR 90
P G ++P PP+ P P PG+P PP +P P P PGEP PP+
Sbjct: 461 PKPGLLKPPPPKPGKPPPP*PGKPPPPKPGKPPPPPKPGKP-------PPPKPGEPPPPK 303
Query: 91 RPYSPGGQFYRIPDGGPGEPIPLRRPYSPGGQFDMPFMGRHVDDP 135
P P PG+P P +P G+ P G+ P
Sbjct: 302 PGNLP-------PPPKPGKPPPPPKP----GKLPTPKPGKPPPKP 201
>TC229391 weakly similar to UP|Q00484 (Q00484) Mini-collagen precursor,
partial (30%)
Length = 795
Score = 39.3 bits (90), Expect = 0.001
Identities = 33/106 (31%), Positives = 43/106 (40%)
Frame = -1
Query: 21 HYHDRAWYGIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPD 80
H H + YG P G P P P +P + + P P PP+ PG G P
Sbjct: 465 HPHLNSLYGNPPGMPPTPPTPPKP---------VFEKPPPTP-PPKPGKMPGNPVPGNPV 316
Query: 81 GGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIPLRRPYSPGGQFDMP 126
PG P PP P PG ++ + G + PL +P G MP
Sbjct: 315 --PGNPGPPENPGKPGNP-RKLGNPGKKKGKPLLKPKRKPGPPPMP 187
>TC225011 similar to UP|Q09083 (Q09083) Hydroxyproline-rich glycoprotein
precursor, partial (20%)
Length = 964
Score = 38.5 bits (88), Expect = 0.002
Identities = 36/136 (26%), Positives = 49/136 (35%)
Frame = +2
Query: 14 PFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGG 73
P P H H Y P P PP++PY +Y P PP + P
Sbjct: 107 PHPHPHPHPHPPYVYHSP------PPPPKKPY-----YYHSP--------PPPVHHHPYP 229
Query: 74 QFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIPLRRPYSPGGQFDMPFMGRHVD 133
+ P P P PP++PY +Y P P P P P+ + P H
Sbjct: 230 HLH--PHPHPHPPPPPKKPY-----YYHSPPP-PVHPHPYPHPHPHPHPYPHPHPHPHPH 385
Query: 134 DPYLYDDNMRGIKRPF 149
PY+Y K+P+
Sbjct: 386 PPYVYHSPPPPPKKPY 433
>AW311078 similar to GP|13872979|dbj P0702B09.13 {Oryza sativa (japonica
cultivar-group)}, partial (15%)
Length = 236
Score = 38.5 bits (88), Expect = 0.002
Identities = 25/63 (39%), Positives = 31/63 (48%)
Frame = +1
Query: 27 WYGIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEP 86
W G P G P+ P+ P+SP G + G G PPR P+ P QF+ GG G P
Sbjct: 73 WGGDPGGPPLFPLCGPPPFSPWGVW------GKG---PPRPPFPPFFQFF----GGWGPP 213
Query: 87 IPP 89
PP
Sbjct: 214 PPP 222
Score = 33.9 bits (76), Expect = 0.044
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -3
Query: 53 GIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGG-PGEPI 111
G+ GG G P PP++ G GGP P+ P P GG + GG PG P
Sbjct: 234 GLKRGGGGGPPPPKKLEKRG-------KGGPRGPLSPNPPGGKGGGATKGKKGGAPGVPP 76
Query: 112 P 112
P
Sbjct: 75 P 73
Score = 32.7 bits (73), Expect = 0.097
Identities = 27/73 (36%), Positives = 33/73 (44%)
Frame = +1
Query: 40 PPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQF 99
PP P+ GG P G P P+ P+SP G + G G PPR P+ P QF
Sbjct: 52 PPPFPHFWGGD----PGGPPLFPLCGPPPFSPWGVW------GKG---PPRPPFPPFFQF 192
Query: 100 YRIPDGGPGEPIP 112
+ GG G P P
Sbjct: 193 F----GGWGPPPP 219
Score = 32.7 bits (73), Expect = 0.097
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = -3
Query: 29 GIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSP-GGQFYGIPDGGPGEPI 87
G+ GG P PP++ G GGP P+ P P GG G G PG P
Sbjct: 234 GLKRGGGGGPPPPKKLEKRG-------KGGPRGPLSPNPPGGKGGGATKGKKGGAPGVP- 79
Query: 88 PPRRPYSPGGQFYRIPD---GGPG 108
PP+ GG+ + P GG G
Sbjct: 78 PPKMGKRGGGEKPKKPPKKRGGGG 7
Score = 28.9 bits (63), Expect = 1.4
Identities = 22/66 (33%), Positives = 27/66 (40%)
Frame = -1
Query: 57 GGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIPLRRP 116
GG G P PP+ + GG+ GG G P P GG R GGP P +
Sbjct: 221 GGGGGPHPPKN-WKKGGK------GGRGGPFPQTPQGEKGGGPQRGKRGGPPGSPPQKWG 63
Query: 117 YSPGGQ 122
GG+
Sbjct: 62 KGGGGK 45
Score = 27.3 bits (59), Expect = 4.1
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 5/56 (8%)
Frame = -2
Query: 57 GGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPD-----GGP 107
G G P P GG G GGP P P GG+ + P GGP
Sbjct: 169 GAAGAPFPKPPRGKRGGGHKGEKGGGPRGPPPKNGEKGGGGKTQKTPQKKGRGGGP 2
>CK606365
Length = 587
Score = 38.5 bits (88), Expect = 0.002
Identities = 25/58 (43%), Positives = 27/58 (46%)
Frame = -1
Query: 53 GIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEP 110
G P G G P PP P PGG G+ GG GE P P PGG + G PG P
Sbjct: 539 GFPPLGGGVPPPP--PERPGG---GVFWGGEGEGAPLANPLFPGGGGFFYGGGPPGFP 381
Score = 37.4 bits (85), Expect = 0.004
Identities = 32/91 (35%), Positives = 37/91 (40%)
Frame = -1
Query: 39 IPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQ 98
+PP P PGG G+ GG GE P P PGG + G PG P P G
Sbjct: 515 VPPPPPERPGG---GVFWGGEGEGAPLANPLFPGGGGFFYGGGPPGFP-----PGKGAGG 360
Query: 99 FYRIPDGGPGEPIPLRRPYSPGGQFDMPFMG 129
I GGP PL P F + F+G
Sbjct: 359 APPIKGGGP----PLGPPRVFPFWFRVVFLG 279
Score = 34.7 bits (78), Expect = 0.026
Identities = 30/102 (29%), Positives = 39/102 (37%), Gaps = 14/102 (13%)
Frame = +1
Query: 29 GIPDGGPIEPIPPRRPYSPGGQFYGIPD--------------GGPGEPIPPRRPYSPGGQ 74
GIP G P PGG+F+ P+ GGP PP +P
Sbjct: 193 GIPKGPPKNRGETGAKPVPGGKFFPPPNPPKKTTRNQKGKTRGGPRGGPPPLIGGAPPAP 372
Query: 75 FYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIPLRRP 116
F P G PG P P + P PG + + +G P P + P
Sbjct: 373 F---PGGKPGGPPP*KNPPPPGKR--GLANGAPSPSPPQKTP 483
Score = 33.5 bits (75), Expect = 0.057
Identities = 25/67 (37%), Positives = 27/67 (39%)
Frame = +1
Query: 60 GEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIPLRRPYSP 119
GEP P RP P Q P GGP + PP PG IP G P P
Sbjct: 82 GEPPPDPRPPPPKPQGNPGPPGGPPKGKPP----PPGEANLGIPKGPPKNRGETGAKPVP 249
Query: 120 GGQFDMP 126
GG+F P
Sbjct: 250 GGKFFPP 270
Score = 29.3 bits (64), Expect = 1.1
Identities = 31/97 (31%), Positives = 38/97 (38%), Gaps = 1/97 (1%)
Frame = +3
Query: 34 GPIEPIPPRRPYSPGGQFYGIPDGGP-GEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRP 92
G I P PP+ P + GGP G P P PG G G P PP
Sbjct: 252 GKIFP-PPKSPQKNNPEPKRENPGGPKGGPTPLNWGGPPGPFSRGKTGGAPAIKKPPPPR 428
Query: 93 YSPGGQFYRIPDGGPGEPIPLRRPYSPGGQFDMPFMG 129
GQ+ +P P P P RP+ GG+ + P G
Sbjct: 429 EKGVGQWGPLPLPPPKNPAP--RPFG-GGRGNPPPQG 530
Score = 26.6 bits (57), Expect = 7.0
Identities = 27/79 (34%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = +3
Query: 29 GIPDGGPIEPIPPRRPYSPGGQFY-GIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPI 87
G P GGP P P G F G G P PP GQ+ +P P P
Sbjct: 318 GGPKGGPT----PLNWGGPPGPFSRGKTGGAPAIKKPPPPREKGVGQWGPLPLPPPKNPA 485
Query: 88 PPRRPYSPGGQFYRIPDGG 106
P RP+ GG+ P GG
Sbjct: 486 P--RPFG-GGRGNPPPQGG 533
Score = 26.6 bits (57), Expect = 7.0
Identities = 27/86 (31%), Positives = 29/86 (33%)
Frame = +2
Query: 29 GIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIP 88
G P G PP P F G GGP P P G P P +P P
Sbjct: 308 GKPGGAQGGAHPP*LGGPPRPLFQGENRGGPRHKKTPPPPGKGGWPMGPPPPPPPKKPRP 487
Query: 89 PRRPYSPGGQFYRIPDGGPGEPIPLR 114
P +R GG GEP P R
Sbjct: 488 PA---------FR---GGEGEPPPPR 529
>TC224979 similar to UP|Q09083 (Q09083) Hydroxyproline-rich glycoprotein
precursor, partial (32%)
Length = 693
Score = 37.7 bits (86), Expect = 0.003
Identities = 30/104 (28%), Positives = 40/104 (37%), Gaps = 5/104 (4%)
Frame = +1
Query: 14 PFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPI-----PPRRP 68
P P Y +Y P P P PP++PY +Y P P +P PP P
Sbjct: 115 PPPSPPPPYKKPYYYHSPP--PPSPPPPKKPY-----YYHSPPPPPKKPYYYHSPPPPSP 273
Query: 69 YSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPIP 112
P + Y P P PP++PY ++ P P P P
Sbjct: 274 PPPYKKPYYYHSPPPPSPPPPKKPY----YYHSPPPPSPPPPKP 393
>CF921965
Length = 486
Score = 37.7 bits (86), Expect = 0.003
Identities = 31/96 (32%), Positives = 39/96 (40%), Gaps = 18/96 (18%)
Frame = +3
Query: 31 PDGGPIEPI---------PPRRPYSPGGQFYGIPDGGPGEPIPPRRPY---SPGGQFYGI 78
P GG P PP + PGG G GG G PP++ + +P G+
Sbjct: 195 PPGGKKNPF*KKKGGGGGPPLKKKKPGGG--GKKKGGGGPRGPPKKNFRNGAPKGEKKFS 368
Query: 79 PD------GGPGEPIPPRRPYSPGGQFYRIPDGGPG 108
P GG G+ PPR GG+F P GPG
Sbjct: 369 PKNPQKKGGGGGKKTPPRGFGGGGGKFQTTPPKGPG 476
>TC215092 weakly similar to UP|Q9RB08 (Q9RB08) Outer membrane lipoprotein
Pcp, partial (14%)
Length = 518
Score = 37.4 bits (85), Expect = 0.004
Identities = 34/107 (31%), Positives = 42/107 (38%), Gaps = 2/107 (1%)
Frame = +3
Query: 12 GAPFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQFYGI-PDGGPGEPIPPRRPYS 70
G P AGP + RA I GP + PP+ P + + P G P PI P
Sbjct: 150 GPPKAGPPKAGPPRAL--ITTSGPPKAGPPKAPVTASEPEPPVTPSGPPRAPISTSGPPK 323
Query: 71 PGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGGPGEPI-PLRRP 116
G I GP + PPR P + Q I P P+ PL P
Sbjct: 324 AGPPRAPITTSGPPKAGPPRAPVTASEQEPPITASEPEPPVTPLGPP 464
Score = 33.9 bits (76), Expect = 0.044
Identities = 24/77 (31%), Positives = 27/77 (34%)
Frame = +3
Query: 31 PDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPR 90
P G P PI P G I GP + PPR P + Q I P P+ P
Sbjct: 276 PSGPPRAPISTSGPPKAGPPRAPITTSGPPKAGPPRAPVTASEQEPPITASEPEPPVTPL 455
Query: 91 RPYSPGGQFYRIPDGGP 107
P G I GP
Sbjct: 456 GPPKAGPPRAPITTSGP 506
Score = 31.2 bits (69), Expect = 0.28
Identities = 28/95 (29%), Positives = 34/95 (35%), Gaps = 1/95 (1%)
Frame = +3
Query: 29 GIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGE-PIPPRRPYSPGGQFYGIPDGGPGEPI 87
G P GP + PPR + G P GP + P+ P P P G P PI
Sbjct: 150 GPPKAGPPKAGPPRALITTSGP----PKAGPPKAPVTASEPEPPV-----TPSGPPRAPI 302
Query: 88 PPRRPYSPGGQFYRIPDGGPGEPIPLRRPYSPGGQ 122
P G I GP + P R P + Q
Sbjct: 303 STSGPPKAGPPRAPITTSGPPKAGPPRAPVTASEQ 407
Score = 30.8 bits (68), Expect = 0.37
Identities = 29/89 (32%), Positives = 32/89 (35%)
Frame = +3
Query: 9 SRGGAPFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRP 68
S G P AGP R I GP + PPR P + Q P EP PP P
Sbjct: 303 STSGPPKAGPPRA-------PITTSGPPKAGPPRAPVTASEQ---EPPITASEPEPPVTP 452
Query: 69 YSPGGQFYGIPDGGPGEPIPPRRPYSPGG 97
P P G PPR P + G
Sbjct: 453 LGP-------PKAG-----PPRAPITTSG 503
>TC211031 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (11%)
Length = 678
Score = 37.4 bits (85), Expect = 0.004
Identities = 40/143 (27%), Positives = 52/143 (35%), Gaps = 3/143 (2%)
Frame = +3
Query: 35 PIEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYS 94
P P+PP P S P P P PP P P P P+PP P
Sbjct: 270 PPPPLPPPIPLST-------PPPLPPSPPPPLPPSPSPPNLPSPPPLAPPPPLPPLAPPP 428
Query: 95 PGGQFYRIPDGGPGEPI--PLRRPYSPGGQFDMPFM-GRHVDDPYLYDDNMRGIKRPFHM 151
P IP GPGE + P R P P D+ + G + +P L N
Sbjct: 429 PPLPPLPIPPNGPGEYLVPPPRDPNLP----DLDDLNGAKIINPLLCLSN---------- 566
Query: 152 TVRFCFVLYLLMCMVVFPYKFVL 174
T F + L+ ++ PY F +
Sbjct: 567 TSYFSLHSFTLLVLLCLPYYFFM 635
Score = 30.8 bits (68), Expect = 0.37
Identities = 18/43 (41%), Positives = 20/43 (45%), Gaps = 2/43 (4%)
Frame = +3
Query: 31 PDGGPIEPIPPRRPYSPGGQFYGIPDGGPGEPI--PPRRPYSP 71
P P P+PP P P IP GPGE + PPR P P
Sbjct: 381 PPLAPPPPLPPLAPPPPPLPPLPIPPNGPGEYLVPPPRDPNLP 509
>AI443498
Length = 377
Score = 36.2 bits (82), Expect = 0.009
Identities = 30/95 (31%), Positives = 41/95 (42%), Gaps = 13/95 (13%)
Frame = +1
Query: 40 PPRRPYSPGGQFYGIPDGGP---------GEPIPPRRPYSPGGQFYGIPDGGPGEPIPPR 90
P ++ PGG+F+ P P G+P PP P+ Q + P GGP + +PP
Sbjct: 13 PKKKKKKPGGEFFSPPPPNPFSPQKKKPFGDPNPP--PFFFPPQNHPPPWGGPRKGLPPL 186
Query: 91 RPYSPGGQFYRIPDGGP---GEPIPLR-RPYSPGG 121
P + P G P G P R P +PGG
Sbjct: 187 CETPPLFF*KKTPPGAPNPLGGPRGFRATPPTPGG 291
Score = 35.0 bits (79), Expect = 0.020
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = -3
Query: 55 PDGGPGEPIPPRRPYSPGGQFYGIPDGGPGEPIPPRRPYSPGGQFYRIPDGG----PGEP 110
P GG G P PP GG+ G P P PP+ + PGG F+ GG G+P
Sbjct: 318 PXGGGGPPPPP------GGR-----GGCPKPPGPPKGVWGPGGGFFLKKKGGGFTKGGKP 172
Query: 111 IP 112
+P
Sbjct: 171 LP 166
Score = 29.6 bits (65), Expect = 0.82
Identities = 31/109 (28%), Positives = 41/109 (37%), Gaps = 23/109 (21%)
Frame = -3
Query: 4 GHYAASRGGAPFAGPSRHYHDRAWYGIPDGGPIEPIPPRRPYSPGGQFYGIPDGG----P 59
G ++ GG P P G G P P PP+ + PGG F+ GG
Sbjct: 330 GGFSPXGGGGPPPPP----------GGRGGCPKPPGPPKGVWGPGGGFFLKKKGGGFTKG 181
Query: 60 GEPIPPRRP---------------YSPGGQFY----GIPDGGPGEPIPP 89
G+P+P P + P G F+ GI GG G+ PP
Sbjct: 180 GKPLPGTPPRGGVVLGGKKKRGGVWVPKGFFFLGGKGI-GGGGGKEFPP 37
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.323 0.153 0.530
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,785,640
Number of Sequences: 63676
Number of extensions: 222350
Number of successful extensions: 1888
Number of sequences better than 10.0: 181
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1657
length of query: 182
length of database: 12,639,632
effective HSP length: 91
effective length of query: 91
effective length of database: 6,845,116
effective search space: 622905556
effective search space used: 622905556
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)
Medicago: description of AC149546.4