Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149494.9 + phase: 0 
         (441 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC221331 homologue to UP|Q9FIT1 (Q9FIT1) Emb|CAB87280.1 (AT5g620...   290  7e-79
TC209926 similar to UP|Q9FIT1 (Q9FIT1) Emb|CAB87280.1 (AT5g62070...   274  5e-74
TC219947                                                              188  4e-48
BI498722 homologue to GP|15215590|gb| AT5g62070/mtg10_90 {Arabid...   159  3e-39
AI937973 homologue to GP|15215590|gb| AT5g62070/mtg10_90 {Arabid...   119  2e-27
TC233008 similar to UP|Q9ASW3 (Q9ASW3) AT3g49260/F2K15_120 (Guar...   117  1e-26
TC233191 similar to UP|Q9LK76 (Q9LK76) Arabidopsis thaliana geno...   111  7e-25
BF426138                                                              110  1e-24
TC222666 similar to UP|Q9MAM4 (Q9MAM4) T25K16.10, partial (22%)       104  9e-23
TC234977                                                              101  8e-22
BQ081197                                                              100  2e-21
TC232309                                                               90  2e-18
TC224494                                                               85  7e-17
BE609266                                                               84  1e-16
AW234037                                                               83  2e-16
TC219019                                                               69  4e-12
BE661814 similar to PIR|A86332|A863 F6F9.8 protein - Arabidopsis...    66  4e-11
TC234741 weakly similar to UP|Q93ZH7 (Q93ZH7) AT5g03040/F15A17_7...    64  1e-10
TC221116 similar to UP|Q9LK76 (Q9LK76) Arabidopsis thaliana geno...    64  2e-10
BF425129                                                               62  4e-10

>TC221331 homologue to UP|Q9FIT1 (Q9FIT1) Emb|CAB87280.1
           (AT5g62070/mtg10_90), partial (24%)
          Length = 752

 Score =  290 bits (743), Expect = 7e-79
 Identities = 164/233 (70%), Positives = 181/233 (77%), Gaps = 3/233 (1%)
 Frame = +1

Query: 1   MGFLRRLFGAKKPIPPSDGSGKKSDKDNKRRWSFGKQSSKTKSLPQPPP-SAFNQFDSST 59
           MGFLRR+FGAKKP            K  K+RW+F K + + KSLP PPP SA   FDSST
Sbjct: 82  MGFLRRIFGAKKP---------SDSKSAKKRWTFLKHTVRNKSLPPPPPPSAVTYFDSST 234

Query: 60  PLERNKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSSGVAGSSNKTRGQLRLPE--ETA 117
           PL+ NKHAIAVAAATAAVAEAALAAAHAAAEVVRLTS GV+ +S +           ETA
Sbjct: 235 PLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGGVSATSTRPAAMAARVGNLETA 414

Query: 118 AVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKKTADMLRRMQTLVRLQTKARASR 177
           AV+IQSAFRGYLARRALRALKALVKLQALVRGHIVRK++ADMLRRMQTLVRLQ +ARASR
Sbjct: 415 AVRIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQSADMLRRMQTLVRLQAQARASR 594

Query: 178 AHLSSDNLHSFKSSLSHYPVPEEYEQPHHVYSTKFGGSSILKRCSSNSNFRKI 230
           AHL SD   +F SSLSHYPVPEEYE P   +STKF GS ILKRCSSN+N R +
Sbjct: 595 AHL-SDPSFNFNSSLSHYPVPEEYEHPPRGFSTKFDGSFILKRCSSNANSRNV 750


>TC209926 similar to UP|Q9FIT1 (Q9FIT1) Emb|CAB87280.1 (AT5g62070/mtg10_90),
           partial (9%)
          Length = 1271

 Score =  274 bits (701), Expect = 5e-74
 Identities = 158/274 (57%), Positives = 183/274 (66%), Gaps = 29/274 (10%)
 Frame = +3

Query: 197 VPEEYEQPHHVYSTKFGGSSILKRCSSNSNFRKIESEKPRFGSNWLDHWMQENSISQTKN 256
           VPE+Y+     YSTKF GS ILKRC SN+NFR I+ EK RFGS+WLD WM+ENS  QT++
Sbjct: 252 VPEDYQHSLRAYSTKFDGS-ILKRCRSNANFRDIDVEKARFGSHWLDSWMEENSWRQTRD 428

Query: 257 ASSKNRHPDEHKSDKILEVDTWKPQLNKNE------------------NNVNSMSNESPS 298
           AS KN H D+ KSDKILEVDTWKP LN +                   NN N ++ ESPS
Sbjct: 429 ASLKNGHLDDEKSDKILEVDTWKPHLNSHHSSGSSFQTSSHHYLSSDYNNENFVAYESPS 608

Query: 299 KHSTKAQNQSL---------SVKFHKAKEEVAASRTADNSPQTFSASSRNGSGVRRNTPF 349
           K S+KA N SL         S+K HK KEE AA +  ++SPQ  +ASSR GS  RR  PF
Sbjct: 609 KRSSKALNPSLSSREVLPFGSLKPHKGKEE-AALQNVEDSPQA*TASSRLGSDARRG-PF 782

Query: 350 TPTRSECSWSFLGGYSGYPNYMANTESSRAKVRSQSAPRQRHEFEEYS-STRRPFQGLWD 408
           TPT+SEC+WSF  GY G+PNYMANTESSRAKVRS SAPRQR EFE Y  STRR  QGLW+
Sbjct: 783 TPTKSECAWSFFSGYPGHPNYMANTESSRAKVRSHSAPRQRMEFERYGHSTRRSLQGLWE 962

Query: 409 VGSTNSDNDSDSRSNKVSPALSR-FNRIGSSNLR 441
            G  +SD DSD RS   +   S   NRIGS+NLR
Sbjct: 963 AG-PSSDRDSDFRSKAYATTTSSCLNRIGSANLR 1061


>TC219947 
          Length = 772

 Score =  188 bits (478), Expect = 4e-48
 Identities = 109/171 (63%), Positives = 125/171 (72%), Gaps = 11/171 (6%)
 Frame = +1

Query: 282 LNKNENNVN-SMSNESPSKHSTKAQNQSLS---------VKFHKAKEEVAASRTADNSPQ 331
           LN + NN N ++++ESPSK S KA NQS S         +KFH+ KEE A+SRTADNSPQ
Sbjct: 37  LNADYNNENFAVAHESPSKRSAKALNQSFSSREVLQLSSLKFHQGKEE-ASSRTADNSPQ 213

Query: 332 TFSASSRNGSGVRRNT-PFTPTRSECSWSFLGGYSGYPNYMANTESSRAKVRSQSAPRQR 390
            FSA SRNGSG RR   PFTPTRSECS  F  GY+G+PNYMANTES RAKVRSQSAPRQR
Sbjct: 214 AFSAHSRNGSGARRGGGPFTPTRSECSLGFFSGYTGHPNYMANTESFRAKVRSQSAPRQR 393

Query: 391 HEFEEYSSTRRPFQGLWDVGSTNSDNDSDSRSNKVSPALSRFNRIGSSNLR 441
            EF+ Y STRRP      +  +NSD+DSD R NKV PA ++ NRIGSSNLR
Sbjct: 394 LEFDRYGSTRRPVH----LVGSNSDHDSDLR-NKVLPAFNQMNRIGSSNLR 531


>BI498722 homologue to GP|15215590|gb| AT5g62070/mtg10_90 {Arabidopsis
           thaliana}, partial (14%)
          Length = 421

 Score =  159 bits (401), Expect = 3e-39
 Identities = 97/144 (67%), Positives = 106/144 (73%), Gaps = 7/144 (4%)
 Frame = +1

Query: 1   MGFLRRLFGAKKPIPPSDGSGKKSD-KDNKRRWSFGKQSSKTKSLPQPP-PSAFN-QFDS 57
           MGFLRRLFGAKKP          SD K  K+RW+F K + + KSLP PP P A N  FDS
Sbjct: 19  MGFLRRLFGAKKP----------SDCKSGKKRWTFLKHTVRNKSLPPPPIPPALNTHFDS 168

Query: 58  STPLERNKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSSGVAGSSNKTRGQLRLPE--- 114
           STPL+ NKHAIAVAAATAAVAEAALAAAHAAAEVVRLTS GVA +S  +R  +       
Sbjct: 169 STPLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGGVAATSTSSRTAVTAARVGN 348

Query: 115 -ETAAVKIQSAFRGYLARRALRAL 137
            ETAAV+IQSAFRGYLARRALRAL
Sbjct: 349 LETAAVRIQSAFRGYLARRALRAL 420


>AI937973 homologue to GP|15215590|gb| AT5g62070/mtg10_90 {Arabidopsis
           thaliana}, partial (12%)
          Length = 425

 Score =  119 bits (299), Expect = 2e-27
 Identities = 82/142 (57%), Positives = 90/142 (62%), Gaps = 17/142 (11%)
 Frame = +3

Query: 4   LRRLFGAKKPI---PPSDGSGKKSDKDNKRRWSFGKQSSKTKSLPQPPPSAFNQ---FDS 57
           LRRLFG KK     PPS     K +KDNK+ WSF K S++ K  P   P+  N    FDS
Sbjct: 6   LRRLFGGKKHHNNPPPSSSDASKPNKDNKKTWSFIKHSTRYK--PNTLPTTLNNNSNFDS 179

Query: 58  STP-------LERNKHAIAVAAATAAVAEAALAAAHAAAEVVRLTS--SGVAGSSNKTRG 108
           ST        L+ NKHAIAVAAATAAVAEAALAAAHAAAEVVRLTS   GV+        
Sbjct: 180 STSSAPFTESLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGTGGVSSRPAPAPQ 359

Query: 109 QLRLPEET--AAVKIQSAFRGY 128
             R+ EET  AAVKIQSAFRGY
Sbjct: 360 PRRVAEETTAAAVKIQSAFRGY 425


>TC233008 similar to UP|Q9ASW3 (Q9ASW3) AT3g49260/F2K15_120 (Guard cell
           associated protein) (SF16-like protein), partial (29%)
          Length = 700

 Score =  117 bits (292), Expect = 1e-26
 Identities = 75/127 (59%), Positives = 86/127 (67%), Gaps = 2/127 (1%)
 Frame = +1

Query: 57  SSTPL--ERNKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSSGVAGSSNKTRGQLRLPE 114
           +STP+  E   HAIAVAAATAA AE A+ AA AAA VVRL  +G  G  +K        E
Sbjct: 307 TSTPVTNEDRSHAIAVAAATAAAAETAVVAAQAAARVVRL--AGSYGRQSK--------E 456

Query: 115 ETAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKKTADMLRRMQTLVRLQTKAR 174
           E AA  IQS +RGYLARRALRALK LV+LQALVRGH VRK+    +R MQ LVR+Q + R
Sbjct: 457 ERAATLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVR 636

Query: 175 ASRAHLS 181
           A R  LS
Sbjct: 637 ARRFQLS 657


>TC233191 similar to UP|Q9LK76 (Q9LK76) Arabidopsis thaliana genomic DNA,
           chromosome 3, P1 clone: MDC8, partial (23%)
          Length = 411

 Score =  111 bits (277), Expect = 7e-25
 Identities = 67/117 (57%), Positives = 82/117 (69%)
 Frame = +3

Query: 54  QFDSSTPLERNKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSSGVAGSSNKTRGQLRLP 113
           Q D+    E+ KHA+AVAAATA  A+AA+AAA A A V+RLTS+     SN T   +   
Sbjct: 84  QTDTDIQNEQRKHAMAVAAATAVAADAAVAAAQAVAAVIRLTST-----SNATSKSI--- 239

Query: 114 EETAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKKTADMLRRMQTLVRLQ 170
           EE AA+KIQSAFR +LA++AL AL+ LVKLQALVRGH+VRK+    LR MQ LV  Q
Sbjct: 240 EEAAAIKIQSAFRSHLAKKALCALRGLVKLQALVRGHLVRKQAKATLRCMQALVTAQ 410


>BF426138 
          Length = 438

 Score =  110 bits (275), Expect = 1e-24
 Identities = 60/79 (75%), Positives = 67/79 (83%)
 Frame = +2

Query: 130 ARRALRALKALVKLQALVRGHIVRKKTADMLRRMQTLVRLQTKARASRAHLSSDNLHSFK 189
           ARRALRALKALVKLQALVRGHIVRK++ADMLRRMQTLVRLQ +ARASRAHL SD   +F 
Sbjct: 74  ARRALRALKALVKLQALVRGHIVRKQSADMLRRMQTLVRLQAQARASRAHL-SDPSFNFN 250

Query: 190 SSLSHYPVPEEYEQPHHVY 208
           SSLSHYPV + +   HH +
Sbjct: 251 SSLSHYPVCKVFYNCHHSF 307


>TC222666 similar to UP|Q9MAM4 (Q9MAM4) T25K16.10, partial (22%)
          Length = 1019

 Score =  104 bits (259), Expect = 9e-23
 Identities = 85/186 (45%), Positives = 99/186 (52%), Gaps = 10/186 (5%)
 Frame = +2

Query: 18  DGSGKKSDKDNKRRWSFGK----------QSSKTKSLPQPPPSAFNQFDSSTPLERNKHA 67
           D    +  K  KRRW F K           S+ T         A +   S T  ++ KHA
Sbjct: 5   DQEEDEEKKREKRRWIFRKTHMSHEGVNNNSNHTTQQKVQHDVAASGGGSRTDQDQ-KHA 181

Query: 68  IAVAAATAAVAEAALAAAHAAAEVVRLTSSGVAGSSNKTRGQLRLPEETAAVKIQSAFRG 127
           +AVA ATA   EAA+A A AAAEV RL+         K     R  E  AAV IQ+AFRG
Sbjct: 182 LAVAMATA---EAAMATAQAAAEVARLS---------KPASHAR--EHFAAVVIQTAFRG 319

Query: 128 YLARRALRALKALVKLQALVRGHIVRKKTADMLRRMQTLVRLQTKARASRAHLSSDNLHS 187
           YLARRALRALK LVKLQALVRGH VRK+    LR MQ LVR+Q +    R   S +   S
Sbjct: 320 YLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSSLEG--S 493

Query: 188 FKSSLS 193
            KS+ S
Sbjct: 494 RKSTFS 511


>TC234977 
          Length = 808

 Score =  101 bits (251), Expect = 8e-22
 Identities = 80/219 (36%), Positives = 120/219 (54%), Gaps = 14/219 (6%)
 Frame = +2

Query: 130 ARRALRALKALVKLQALVRGHIVRKKTADMLRRMQTLVRLQTKARASRAHLSSDNLHSFK 189
           AR+ALRALK LVKLQALVRGHI RK+TA+ L+R+Q L+R+Q + RA RA +    LHS  
Sbjct: 176 ARKALRALKGLVKLQALVRGHIERKRTAEWLQRVQALLRVQAQIRAGRAQI----LHS-P 340

Query: 190 SSLSHY---PVPEEYEQPHHVYSTKFG--GSSILKRCSSNSNFRKIESEKPRFGSNWLDH 244
           SS SH      P+++E P    S K+    S +LKR SS S  +     + R  S   D 
Sbjct: 341 SSTSHLRGPATPDKFEIPIRSESMKYDQYSSPLLKRNSSKSRVQINGGNQERCRSRSSDS 520

Query: 245 WMQENSISQTKNASSKNRHPDEHKSDKILEVDTWKPQLNKNENNVNSMSNES--PSKH-- 300
            + E   +Q + + ++    DE +S +ILE+D+ KP +     N+    +++   S H  
Sbjct: 521 RIDEQPWTQ-RRSWTRGCSMDEERSVRILEIDSVKPHVTSKRRNLFYSPSQAMVVSDHYS 697

Query: 301 -----STKAQNQSLSVKFHKAKEEVAASRTADNSPQTFS 334
                +T   + +  +K ++ +E  ++   ADNSPQ  S
Sbjct: 698 GCNLTTTSPSSYNSPLKINELEE--SSFCAADNSPQALS 808


>BQ081197 
          Length = 421

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 70/116 (60%), Positives = 75/116 (64%), Gaps = 13/116 (11%)
 Frame = +2

Query: 1   MGFLRRLFGAKK---PIPPSDGSGKKSDKDNKRRWSFGKQSSKTKSLPQPPPSAFNQ--- 54
           MGFLRRLFG KK   P P SD S  K  KD K+ WSF K S++ K  P   P+  N    
Sbjct: 59  MGFLRRLFGGKKHHNPPPSSDAS--KPSKD-KKTWSFVKHSTRYK--PNTLPTTLNNNSN 223

Query: 55  FDSSTP-------LERNKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSSGVAGSS 103
           FD ST        L+ NKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSS    SS
Sbjct: 224 FDPSTSSSPFPESLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSSTGCASS 391


>TC232309 
          Length = 797

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 62/147 (42%), Positives = 82/147 (55%), Gaps = 3/147 (2%)
 Frame = +2

Query: 293 SNESPSKHSTKAQNQSLSVKFHKAKEEVAASR--TADNSPQTFSASSRNGSGVRRNTPFT 350
           S    S  S   + QS S    K   EV  S   TADNSPQ  SASS++  G +R+ PFT
Sbjct: 74  STSLQSAQSPCCEVQSHSYSSQKVNNEVEESPFCTADNSPQYLSASSKD-DGFKRS-PFT 247

Query: 351 PTRSECSWSFLGGYSGYPNYMANTESSRAKVRSQSAPRQRHEFEEYSSTRRPFQGLWDVG 410
           PTRS+ S S++ GY  YP+YMA TESS+AK RS SAP+QR + E   S+ R     +D+ 
Sbjct: 248 PTRSDGSRSYIRGYPDYPSYMACTESSKAKARSLSAPKQRPQSERSGSSDRYSLNGFDMS 427

Query: 411 STNSDNDSD-SRSNKVSPALSRFNRIG 436
              +      S +NK  P   R +++G
Sbjct: 428 RLATQRAMQASFTNKAYPGSGRLDKLG 508


>TC224494 
          Length = 568

 Score = 84.7 bits (208), Expect = 7e-17
 Identities = 69/178 (38%), Positives = 87/178 (48%), Gaps = 3/178 (1%)
 Frame = +2

Query: 3   FLRRLFGAKKPIPPSD--GSGKKSDKDNKRRWSFGKQSSKTKSLPQPPPSAFNQFDSSTP 60
           +++ L G KKP         G KS K    R S G      K       SA     S   
Sbjct: 89  WVKALIGLKKPDKEEHVKEGGGKSKKWRLWRSSSGDTGVSWKGFKGGNHSAVAS--SEVG 262

Query: 61  LERNKHAIAVAAATAAVAEAALAAA-HAAAEVVRLTSSGVAGSSNKTRGQLRLPEETAAV 119
            + + H +A AAAT A   AA+A    A  +  RL                   +E AA+
Sbjct: 263 SDSSPHVVAAAAATGAAFTAAVATVVRAPPKDFRLVK-----------------QEWAAI 391

Query: 120 KIQSAFRGYLARRALRALKALVKLQALVRGHIVRKKTADMLRRMQTLVRLQTKARASR 177
           +IQ+AFR  LARRALRALK +V++QALVRG  VRK+ A  LR MQ LVR+Q + RA R
Sbjct: 392 RIQTAFRALLARRALRALKGVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARR 565


>BE609266 
          Length = 446

 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 60/154 (38%), Positives = 83/154 (52%), Gaps = 4/154 (2%)
 Frame = +2

Query: 28  NKRRWSFGKQ----SSKTKSLPQPPPSAFNQFDSSTPLERNKHAIAVAAATAAVAEAALA 83
           +K++W F KQ    S  T      PP    +    T +E   +   V  ATA  AE  + 
Sbjct: 2   SKKKW-FQKQKLQTSESTSQSDNAPPLPLPEI-ILTHVESEINHDRVEVATAVDAEEPVL 175

Query: 84  AAHAAAEVVRLTSSGVAGSSNKTRGQLRLPEETAAVKIQSAFRGYLARRALRALKALVKL 143
           A   AA  V+ T+  +    NK        EE AA++IQ AFRGYLARRALRAL+ LV+L
Sbjct: 176 AVQTAAAEVQATT--IVQFDNKPT------EEMAAIRIQKAFRGYLARRALRALRGLVRL 331

Query: 144 QALVRGHIVRKKTADMLRRMQTLVRLQTKARASR 177
           ++L+ G +V+++    LR MQT   LQT+ R+ R
Sbjct: 332 RSLMEGPVVKRQAISTLRSMQTFAHLQTQIRSRR 433


>AW234037 
          Length = 410

 Score = 83.2 bits (204), Expect = 2e-16
 Identities = 50/110 (45%), Positives = 64/110 (57%)
 Frame = +1

Query: 116 TAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKKTADMLRRMQTLVRLQTKARA 175
           +A   +  ++R   ARRALRALK LVKLQALVRGHI RK+TA+ L+R+Q L+  QT+  A
Sbjct: 37  SAQCSLSFSYRNC*ARRALRALKGLVKLQALVRGHIERKRTAEWLKRLQALLHAQTQVSA 216

Query: 176 SRAHLSSDNLHSFKSSLSHYPVPEEYEQPHHVYSTKFGGSSILKRCSSNS 225
                +S +     S L     PE++E P    S K   S ILKR  S S
Sbjct: 217 GLTLHASPSSSKLSSHLQGPETPEKFESPIRSKSMKHEHSPILKRNGSKS 366


>TC219019 
          Length = 796

 Score = 68.9 bits (167), Expect = 4e-12
 Identities = 57/151 (37%), Positives = 82/151 (53%), Gaps = 10/151 (6%)
 Frame = +2

Query: 34  FGKQSSKTKSLPQPPPSAFNQFD----SSTPLERNKHAIAVAAATAAVAEAALAAAHAAA 89
           FGK+SSK+ ++ +      NQ +    +S  LE    A+   + T A  E  L   +  A
Sbjct: 155 FGKKSSKS-NISKGREKLVNQEEGVVVTSKVLETGL-ALEPTSDTIARHEEDLELENEEA 328

Query: 90  EVVRLTSSGV--AGSSNKTRG----QLRLPEETAAVKIQSAFRGYLARRALRALKALVKL 143
           E V   +  +   GS N+       ++RL E  AA K Q+AFRGYLARRA RALK +++L
Sbjct: 329 ENVIPGNQEIDTVGSINEDAALDPEKIRLEE--AATKAQAAFRGYLARRAFRALKGIIRL 502

Query: 144 QALVRGHIVRKKTADMLRRMQTLVRLQTKAR 174
           QAL+RGH+VR++    L  M  +V+ Q   R
Sbjct: 503 QALIRGHLVRRQAVATLCSMYGIVKFQALVR 595


>BE661814 similar to PIR|A86332|A863 F6F9.8 protein - Arabidopsis thaliana,
           partial (9%)
          Length = 626

 Score = 65.9 bits (159), Expect = 4e-11
 Identities = 52/165 (31%), Positives = 81/165 (48%), Gaps = 11/165 (6%)
 Frame = +1

Query: 25  DKDNKRRWSFGKQSSKTKSLPQPPPSAFNQFDSSTPLERNKHAIAVAAATAA------VA 78
           + ++KR WSF K+S++ + L        N   +  P   NK     +           V 
Sbjct: 142 ESNDKRGWSFRKKSARHRVLS-------NTVIAEAPSSANKETSECSTFNFQPLPEPNVV 300

Query: 79  EAALAAAHAAAEVVRLTS--SGVAGSSNKTRGQLRL---PEETAAVKIQSAFRGYLARRA 133
           E  +   + + E  +L+S  S     +N    + +L   P E+  + IQ+A RG LA+R 
Sbjct: 301 EK-IYTTNCSDEKPQLSSFESSQVEETNVIETEEKLDVNPPESDVIIIQAAIRGLLAQRE 477

Query: 134 LRALKALVKLQALVRGHIVRKKTADMLRRMQTLVRLQTKARASRA 178
           L  LK +VKLQA VRGH+VR+     LR +Q ++++Q   RA RA
Sbjct: 478 LLQLKKVVKLQAAVRGHLVRRHAVGTLRXIQAIIKMQILVRARRA 612


>TC234741 weakly similar to UP|Q93ZH7 (Q93ZH7) AT5g03040/F15A17_70, partial
           (10%)
          Length = 423

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 41/111 (36%), Positives = 66/111 (58%)
 Frame = +2

Query: 45  PQPPPSAFNQFDSSTPLERNKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSSGVAGSSN 104
           P+  P   ++ +++   E+++ A ++  ATA  A AA+AA     EV  LT        N
Sbjct: 134 PRKDPKPISEAENN---EQSRQAFSLVLATAVAAGAAVAA-----EVACLT--------N 265

Query: 105 KTRGQLRLPEETAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKK 155
             R   +  +E AA+KIQ+A+RGYLARR+LR L+ L +L+ LV+G  V+++
Sbjct: 266 TPRSNGKANQEMAAIKIQTAYRGYLARRSLRGLRGLSRLKTLVQGQSVQRQ 418


>TC221116 similar to UP|Q9LK76 (Q9LK76) Arabidopsis thaliana genomic DNA,
           chromosome 3, P1 clone: MDC8, partial (17%)
          Length = 704

 Score = 63.5 bits (153), Expect = 2e-10
 Identities = 46/133 (34%), Positives = 71/133 (52%), Gaps = 8/133 (6%)
 Frame = +1

Query: 268 KSDKILEVDTWKPQLNKNENNVNSMSN--ESPSKHSTKAQNQS-----LSVKFHKAKEEV 320
           +S KI+E+DT+K + +++    ++MS   E  S H+  +         +SV   +  ++ 
Sbjct: 13  ESPKIVEIDTYKTR-SRSRRFTSTMSECGEDMSCHAISSPLPCPVPGRISVPDCRHIQDF 189

Query: 321 AASRTADNSP-QTFSASSRNGSGVRRNTPFTPTRSECSWSFLGGYSGYPNYMANTESSRA 379
                 D     T  ++ R  + VR N P TP +S C  +F   YS +PNYMANT+S  A
Sbjct: 190 DWYYNVDECRFSTAHSTPRFTNYVRPNAPATPAKSVCGDTFFRPYSNFPNYMANTQSFNA 369

Query: 380 KVRSQSAPRQRHE 392
           K+RS SAP+QR E
Sbjct: 370 KLRSHSAPKQRPE 408


>BF425129 
          Length = 415

 Score = 62.4 bits (150), Expect = 4e-10
 Identities = 37/79 (46%), Positives = 48/79 (59%), Gaps = 1/79 (1%)
 Frame = +2

Query: 18  DGSGKKSDKDNKRRWSFGKQSSKT-KSLPQPPPSAFNQFDSSTPLERNKHAIAVAAATAA 76
           D    +  K+ +R+W FG+  SK   S+  P PS      S    E++KHA+ VA A+AA
Sbjct: 95  DTHSTQDKKEKRRKWIFGRLKSKRIPSIKAPLPSK-ETILSEAEEEQSKHALTVAIASAA 271

Query: 77  VAEAALAAAHAAAEVVRLT 95
            AEAA+  AHAAAEVVRLT
Sbjct: 272 AAEAAVTVAHAAAEVVRLT 328


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.310    0.123    0.348 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,038,205
Number of Sequences: 63676
Number of extensions: 262757
Number of successful extensions: 1974
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 1806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1910
length of query: 441
length of database: 12,639,632
effective HSP length: 100
effective length of query: 341
effective length of database: 6,272,032
effective search space: 2138762912
effective search space used: 2138762912
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)


Medicago: description of AC149494.9