Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149494.2 - phase: 0 
         (268 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC215522                                                              343  4e-95
TC215523                                                              198  2e-51
TC216922 weakly similar to GB|AAL16179.1|16226483|AF428411 AT5g0...   154  4e-38
TC215562 weakly similar to UP|Q8RX71 (Q8RX71) At3g51780/ORF3, pa...   130  5e-31
BE823652 weakly similar to GP|19699283|gb| At3g51780/ORF3 {Arabi...   125  2e-29
TC215524                                                              107  6e-24
TC230669 weakly similar to UP|Q8RX71 (Q8RX71) At3g51780/ORF3, pa...    92  2e-19
TC215563 weakly similar to UP|Q8RX71 (Q8RX71) At3g51780/ORF3, pa...    68  4e-12
TC216923                                                               65  2e-11
TC220777 similar to GB|AAS88766.1|46359805|BT012376 At5g14360 {A...    57  7e-09
TC222504 similar to UP|Q6K5J0 (Q6K5J0) Ubiquitin-like protein, p...    57  9e-09
BQ629775 similar to GP|20160649|dbj P0446G04.18 {Oryza sativa (j...    49  3e-06
AW508717                                                               48  5e-06
TC211052                                                               37  0.009
TC215967 weakly similar to GB|AAP13408.1|30023750|BT006300 At5g2...    34  0.079
TC204381 similar to UP|CRTC_RICCO (P93508) Calreticulin precurso...    33  0.13
TC204382 weakly similar to UP|CRTC_RICCO (P93508) Calreticulin p...    33  0.13
TC215525                                                               32  0.39
TC220013 similar to UP|O81998 (O81998) Transcription factor VSF-...    31  0.51
TC215968 similar to UP|Q9LLM3 (Q9LLM3) MTD1, partial (19%)             31  0.67

>TC215522 
          Length = 1778

 Score =  343 bits (881), Expect = 4e-95
 Identities = 193/278 (69%), Positives = 221/278 (79%), Gaps = 15/278 (5%)
 Frame = +3

Query: 6   GELKKMLTGPTGLHHQDQKIFYKNKERDSKAFLDIVGVKDKSKLVVMEDPIAQEKRYLEM 65
           GELKKML+GPTGLHH+DQK+ YK+KERDSKAFLD+VGVKDKSK+V++EDPI+QEKR LE 
Sbjct: 696 GELKKMLSGPTGLHHEDQKLLYKDKERDSKAFLDMVGVKDKSKIVLVEDPISQEKRLLER 875

Query: 66  RKNIKMERAAKSISEISLEVDRLAGQVSALETIISKGGKVVETDVLSLIEKLMNQLLKLD 125
           RKN KME+AAKSISEISLEVDRLAG+VSA E+IISKGGKVVETDVL+LIE LMNQLLKLD
Sbjct: 876 RKNAKMEKAAKSISEISLEVDRLAGRVSAFESIISKGGKVVETDVLNLIELLMNQLLKLD 1055

Query: 126 GIVADGDVKLQRKMQVKRVQKYVETLDMLKIKN----SNGGHVPKKKPQQK----VKLPP 177
           GI+ADGDVKLQRKMQV+RVQKYVETLD+LK+KN    SNG   P  KP QK     +  P
Sbjct: 1056GIMADGDVKLQRKMQVRRVQKYVETLDVLKVKNSMPSSNGDQAP-VKPHQKHSNGQRKGP 1232

Query: 178 IDEQLEGMSIGNHK--LQPSLEQQSQ--RNSNGNS-QVFQQLQHKPSTNSTSEVVVTTKW 232
           I EQ +  S G H+  L P  EQQ +  RNS+ NS  ++Q+ Q +PS NSTS VVVTT W
Sbjct: 1233IQEQQQKHSNGRHRLALAPIQEQQQEQPRNSSENSLALYQEQQEQPSRNSTSGVVVTTNW 1412

Query: 233 ETFDSLPPLIPV--TSASSSSSSTNNSVHPKFKWEHFE 268
           E FDS+PPLIPV  TS    SS TNNS  PKF WE F+
Sbjct: 1413ELFDSVPPLIPVQATSPPPPSSVTNNSGPPKFNWEFFD 1526


>TC215523 
          Length = 790

 Score =  198 bits (503), Expect = 2e-51
 Identities = 114/177 (64%), Positives = 133/177 (74%), Gaps = 9/177 (5%)
 Frame = +2

Query: 101 KGGKVVETDVLSLIEKLMNQLLKLDGIVADGDVKLQRKMQVKRVQKYVETLDMLKIKN-- 158
           KGG+VVETD+L+LIE LMNQLLKLDGI+ADGDVKLQRKMQVKRVQKYVETLD+LK+KN  
Sbjct: 2   KGGRVVETDLLNLIELLMNQLLKLDGIMADGDVKLQRKMQVKRVQKYVETLDVLKVKNSM 181

Query: 159 --SNGGHVPKKKPQQKVKLPPIDEQLEGMSIGNHKLQ--PSLEQQSQ--RNSNGNS-QVF 211
             SNG H P  +PQQK      + Q +  S G+H+L   P  EQQ +  RNSN NS +++
Sbjct: 182 PSSNGDHAP-VQPQQKHS----NGQQQKYSNGHHRLALVPIQEQQQEQPRNSNENSLELY 346

Query: 212 QQLQHKPSTNSTSEVVVTTKWETFDSLPPLIPVTSASSSSSSTNNSVHPKFKWEHFE 268
           Q+ QH+PS NSTS VVVTT WE FDS+PPLIPV S S  SS TNNS  PKF WE F+
Sbjct: 347 QEQQHQPSRNSTSGVVVTTNWELFDSVPPLIPVQSTSPPSSVTNNSGPPKFNWEFFD 517


>TC216922 weakly similar to GB|AAL16179.1|16226483|AF428411
           AT5g07220/T28J14_160 {Arabidopsis thaliana;} , partial
           (15%)
          Length = 1055

 Score =  154 bits (389), Expect = 4e-38
 Identities = 73/154 (47%), Positives = 115/154 (74%)
 Frame = +1

Query: 6   GELKKMLTGPTGLHHQDQKIFYKNKERDSKAFLDIVGVKDKSKLVVMEDPIAQEKRYLEM 65
           GE+KK+L+G TGL   +Q++ Y+ KER++  +LD+ GVKD+SK+V+++DP + E+R+++M
Sbjct: 196 GEVKKVLSGETGLEVDEQRLLYRGKERENGEYLDVCGVKDRSKVVLIQDPSSIERRFIQM 375

Query: 66  RKNIKMERAAKSISEISLEVDRLAGQVSALETIISKGGKVVETDVLSLIEKLMNQLLKLD 125
           R N K++ A ++I+ +++++D+LA QVSA+E  IS G KV E  + +LIE LM Q +KL+
Sbjct: 376 RINAKIQTAHRAINNVAVQLDQLADQVSAIEKSISNGVKVPEVQITTLIEMLMRQAIKLE 555

Query: 126 GIVADGDVKLQRKMQVKRVQKYVETLDMLKIKNS 159
            I A+GD   Q+ +Q KRVQK VE LD LK+ N+
Sbjct: 556 SISAEGDASAQKNLQGKRVQKCVEKLDQLKVSNA 657


>TC215562 weakly similar to UP|Q8RX71 (Q8RX71) At3g51780/ORF3, partial (64%)
          Length = 1128

 Score =  130 bits (328), Expect = 5e-31
 Identities = 84/231 (36%), Positives = 124/231 (53%)
 Frame = +2

Query: 6   GELKKMLTGPTGLHHQDQKIFYKNKERDSKAFLDIVGVKDKSKLVVMEDPIAQEKRYLEM 65
           G++KK+L   TGL   +Q++F++  E+     L   GVKDKSKL ++E   ++E++  E 
Sbjct: 260 GDVKKLLVNKTGLEPAEQRLFFRGIEKGDNQRLQAEGVKDKSKLFLLEGIGSKERKLEET 439

Query: 66  RKNIKMERAAKSISEISLEVDRLAGQVSALETIISKGGKVVETDVLSLIEKLMNQLLKLD 125
           RK  +M +A ++I+ +  EVD+L+ +V+++E  I+ G K  E + L L E LM+QLLKL+
Sbjct: 440 RKENEMSKAFEAIASVRAEVDKLSNRVTSIEVAINGGNKASEKEFLVLTELLMSQLLKLN 619

Query: 126 GIVADGDVKLQRKMQVKRVQKYVETLDMLKIKNSNGGHVPKKKPQQKVKLPPIDEQLEGM 185
           GI A+G+ KLQRK +V RVQ  V+ LD LK +N+N    P       VK   +  Q E  
Sbjct: 620 GIEAEGEAKLQRKAEVNRVQNLVDKLDSLKARNAN----PFSNSSNAVK---VTTQWETF 778

Query: 186 SIGNHKLQPSLEQQSQRNSNGNSQVFQQLQHKPSTNSTSEVVVTTKWETFD 236
             G   L                         PS N +S   VT +WE FD
Sbjct: 779 DSGMESLD-----------------------APSDNPSS-TKVTQEWERFD 859


>BE823652 weakly similar to GP|19699283|gb| At3g51780/ORF3 {Arabidopsis
           thaliana}, partial (31%)
          Length = 742

 Score =  125 bits (315), Expect = 2e-29
 Identities = 81/227 (35%), Positives = 127/227 (55%), Gaps = 4/227 (1%)
 Frame = -3

Query: 8   LKKMLTGPTGLHHQDQKIFYKNKERDSKAFLDIVGVKDKSKLVVMEDPIAQEKRYLEMRK 67
           LK   T        +Q+  ++ KE++ +  L +VGVKD  K++++EDP ++E++  EM K
Sbjct: 737 LKXXXTSEXXXXXXEQRXLFRGKEKEDEECLHMVGVKDMXKVILLEDPASKERKLEEMHK 558

Query: 68  NIKMERAAKSISEISLEVDRLAGQVSALETIISKGGKVVETDVLSLIEKLMNQLLKLDGI 127
           +  + +A ++IS++  EVD+L  +V ALET +  G KV + +   L E LM QLLKLD I
Sbjct: 557 SEDISKACEAISKVRTEVDKLYQKVVALETTVCGGAKVEDKEFAILTELLMVQLLKLDSI 378

Query: 128 VADGDVKLQRKMQVKRVQKYVETLDMLKIKN----SNGGHVPKKKPQQKVKLPPIDEQLE 183
            A+G+ K QR+++V+RVQ YV+T+D LK +N    SN G+           +P I E LE
Sbjct: 377 AAEGEAKGQRRVEVRRVQSYVDTIDNLKARNFAAFSNAGN---------NAVPVIWEALE 225

Query: 184 GMSIGNHKLQPSLEQQSQRNSNGNSQVFQQLQHKPSTNSTSEVVVTT 230
              +G+ K   S    +    N   + F+ +Q  PST    E  + T
Sbjct: 224 S-GVGSLKSPTSFPTSTVITQNW--EHFE*IQVNPSTLFIEEASMMT 93


>TC215524 
          Length = 716

 Score =  107 bits (267), Expect = 6e-24
 Identities = 69/138 (50%), Positives = 86/138 (62%), Gaps = 11/138 (7%)
 Frame = +1

Query: 139 MQVKRVQKYVETLDMLKIKNS----NGGHVPKKKPQQKVKLPPIDEQLEGMSIGNHKLQP 194
           ++VKRVQKYVETLD+LK+KNS    NGGH P + PQQK      + Q +G         P
Sbjct: 82  LKVKRVQKYVETLDVLKVKNSMPSSNGGHAPVQ-PQQKHS----NGQRQG---------P 219

Query: 195 SLEQQSQRNSNGNSQ-----VFQQLQHKPSTNSTSEVVVTTKWETFDSLPPLIPVTSASS 249
             E++ Q++SNG+ +     + +Q Q +PS NSTS VVVTT WE FDS+PPLIPV S S 
Sbjct: 220 VQEKKQQKHSNGHHRLALAPIQEQEQQQPSRNSTSGVVVTTNWELFDSVPPLIPVPSTSP 399

Query: 250 SSSS--TNNSVHPKFKWE 265
           S     TNNS   KF WE
Sbjct: 400 SPHPPVTNNSGPHKFNWE 453


>TC230669 weakly similar to UP|Q8RX71 (Q8RX71) At3g51780/ORF3, partial (49%)
          Length = 674

 Score = 92.4 bits (228), Expect = 2e-19
 Identities = 47/91 (51%), Positives = 66/91 (71%)
 Frame = +1

Query: 70  KMERAAKSISEISLEVDRLAGQVSALETIISKGGKVVETDVLSLIEKLMNQLLKLDGIVA 129
           +M  A+++++E+  EVD+LA +VS LE  +  G +V + + L   E LM QLLKLD I A
Sbjct: 4   EMLEASEAVAEVRAEVDKLAERVSVLEVAVDGGTRVSDKEFLMSTELLMRQLLKLDSIEA 183

Query: 130 DGDVKLQRKMQVKRVQKYVETLDMLKIKNSN 160
           +G+VKLQRK +V+RVQ +V+TLD LK KNSN
Sbjct: 184 EGEVKLQRKAEVRRVQNFVDTLDSLKAKNSN 276



 Score = 34.3 bits (77), Expect = 0.060
 Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
 Frame = +1

Query: 144 VQKYVETLDMLKIKNSNGGHVPKKK--------PQQKVKLPPIDEQLEGMSIGNHKLQPS 195
           V K  E + +L++    G  V  K+         +Q +KL  I+ +      G  KLQ  
Sbjct: 49  VDKLAERVSVLEVAVDGGTRVSDKEFLMSTELLMRQLLKLDSIEAE------GEVKLQRK 210

Query: 196 LEQQSQRNSNGNSQVFQQLQHKPSTNSTSEVVVTTKWETFDS-LPPLIPVTSASSS 250
            E +  +N        +     P T     V V T+WETFDS +  L   TS SSS
Sbjct: 211 AEVRRVQNFVDTLDSLKAKNSNPFTPIGKAVSVATQWETFDSGMGSLNAPTSMSSS 378


>TC215563 weakly similar to UP|Q8RX71 (Q8RX71) At3g51780/ORF3, partial (18%)
          Length = 495

 Score = 68.2 bits (165), Expect = 4e-12
 Identities = 32/89 (35%), Positives = 59/89 (65%)
 Frame = +2

Query: 6   GELKKMLTGPTGLHHQDQKIFYKNKERDSKAFLDIVGVKDKSKLVVMEDPIAQEKRYLEM 65
           G++KK+L   TGL   +Q++F++  E+     L + GVKDKSKL+++E   ++E++  E 
Sbjct: 227 GDVKKLLVNKTGLEPVEQRLFFRGIEKGDNLHLHLEGVKDKSKLLLLEGTASKERKLEET 406

Query: 66  RKNIKMERAAKSISEISLEVDRLAGQVSA 94
           RK   M +A ++I+ +  EVD+L+ +V++
Sbjct: 407 RKQNVMSKAFEAIAGVRAEVDKLSXRVTS 493


>TC216923 
          Length = 629

 Score = 65.5 bits (158), Expect = 2e-11
 Identities = 34/67 (50%), Positives = 44/67 (64%)
 Frame = +2

Query: 93  SALETIISKGGKVVETDVLSLIEKLMNQLLKLDGIVADGDVKLQRKMQVKRVQKYVETLD 152
           SA+E  IS G KV E  + +LIE LM Q +KL+ I A+G    Q+ +Q KRVQK VE LD
Sbjct: 2   SAIEKSISNGVKVPEVQITTLIEMLMRQAIKLESISAEGGASAQKNLQGKRVQKCVEKLD 181

Query: 153 MLKIKNS 159
            LK+ N+
Sbjct: 182 QLKVSNA 202


>TC220777 similar to GB|AAS88766.1|46359805|BT012376 At5g14360 {Arabidopsis
           thaliana;} , partial (64%)
          Length = 735

 Score = 57.4 bits (137), Expect = 7e-09
 Identities = 25/61 (40%), Positives = 42/61 (67%)
 Frame = +1

Query: 6   GELKKMLTGPTGLHHQDQKIFYKNKERDSKAFLDIVGVKDKSKLVVMEDPIAQEKRYLEM 65
           GELK +L+  T    ++Q++ +K KER+   +L +VGV+DK K+++ EDP  +EK+ L +
Sbjct: 307 GELKMILSLATSFEPREQRLLFKGKEREDDEYLHMVGVRDKDKVLLFEDPAIKEKKLLGL 486

Query: 66  R 66
           R
Sbjct: 487 R 489


>TC222504 similar to UP|Q6K5J0 (Q6K5J0) Ubiquitin-like protein, partial (60%)
          Length = 774

 Score = 57.0 bits (136), Expect = 9e-09
 Identities = 26/74 (35%), Positives = 47/74 (63%)
 Frame = +2

Query: 6   GELKKMLTGPTGLHHQDQKIFYKNKERDSKAFLDIVGVKDKSKLVVMEDPIAQEKRYLEM 65
           GELK +L+  T L  ++Q++ ++ KE++   FL +VGV+DK K++++EDP  +E + L M
Sbjct: 317 GELKMILSLVTSLEPREQRLLFRGKEKEDNEFLHMVGVRDKDKVLLLEDPAIKEMKLLGM 496

Query: 66  RKNIKMERAAKSIS 79
            +   +     +IS
Sbjct: 497 ARGQPINNTCCTIS 538


>BQ629775 similar to GP|20160649|dbj P0446G04.18 {Oryza sativa (japonica
           cultivar-group)}, partial (9%)
          Length = 435

 Score = 48.5 bits (114), Expect = 3e-06
 Identities = 25/48 (52%), Positives = 33/48 (68%)
 Frame = +2

Query: 88  LAGQVSALETIISKGGKVVETDVLSLIEKLMNQLLKLDGIVADGDVKL 135
           L G V+++E  I+ G K  E + L L E LM+QLLKLDGI A+G+ KL
Sbjct: 290 LRGSVTSIEVSINGGNKASEKEFLVLTELLMSQLLKLDGIEAEGEAKL 433


>AW508717 
          Length = 288

 Score = 47.8 bits (112), Expect = 5e-06
 Identities = 21/46 (45%), Positives = 32/46 (68%)
 Frame = +1

Query: 6   GELKKMLTGPTGLHHQDQKIFYKNKERDSKAFLDIVGVKDKSKLVV 51
           G LK +LT  TGL  ++Q++ ++ KERD    L +VGVKD SK+++
Sbjct: 151 GHLKMVLTSETGLEPKEQRLLFRGKERDDDECLHMVGVKDMSKVIL 288


>TC211052 
          Length = 635

 Score = 37.0 bits (84), Expect = 0.009
 Identities = 19/51 (37%), Positives = 29/51 (56%)
 Frame = +2

Query: 218 PSTNSTSEVVVTTKWETFDSLPPLIPVTSASSSSSSTNNSVHPKFKWEHFE 268
           P +NS+++V VTT+WETFDS         +S + S  ++S      WE F+
Sbjct: 287 PFSNSSNDVKVTTQWETFDS------GMESSDAPSDNSSSTKVTQDWEQFD 421


>TC215967 weakly similar to GB|AAP13408.1|30023750|BT006300 At5g21940
           {Arabidopsis thaliana;} , partial (26%)
          Length = 1034

 Score = 33.9 bits (76), Expect = 0.079
 Identities = 21/79 (26%), Positives = 35/79 (43%), Gaps = 1/79 (1%)
 Frame = +2

Query: 26  FYKNKERDSKAFLDIVGVKDKSKLVVMEDPIAQEKRYLEMR-KNIKMERAAKSISEISLE 84
           FY  K +   +  D        ++V  EDP A++++ L  R  +I+  R+  +I  IS  
Sbjct: 344 FYSGKSKSFTSLADAAAASSMEEIVKPEDPYAKKRKNLIARNSSIERSRSCANIGGISKR 523

Query: 85  VDRLAGQVSALETIISKGG 103
              + G  S L    S+ G
Sbjct: 524 PSNIGGGASCLTLNCSEEG 580


>TC204381 similar to UP|CRTC_RICCO (P93508) Calreticulin precursor, partial
            (81%)
          Length = 1408

 Score = 33.1 bits (74), Expect = 0.13
 Identities = 19/49 (38%), Positives = 27/49 (54%)
 Frame = -3

Query: 214  LQHKPSTNSTSEVVVTTKWETFDSLPPLIPVTSASSSSSSTNNSVHPKF 262
            LQ   S++ T   +V++    FDS    +P +SASSSSSS + S    F
Sbjct: 1055 LQTS*SSSCTPSSLVSSPASVFDSASESLPASSASSSSSSASESTGSSF 909


>TC204382 weakly similar to UP|CRTC_RICCO (P93508) Calreticulin precursor,
           partial (12%)
          Length = 449

 Score = 33.1 bits (74), Expect = 0.13
 Identities = 19/49 (38%), Positives = 27/49 (54%)
 Frame = -1

Query: 214 LQHKPSTNSTSEVVVTTKWETFDSLPPLIPVTSASSSSSSTNNSVHPKF 262
           LQ   S++ T   +V++    FDS    +P +SASSSSSS + S    F
Sbjct: 197 LQTS*SSSCTPSSLVSSPASVFDSASESLPASSASSSSSSASESTGSSF 51


>TC215525 
          Length = 395

 Score = 31.6 bits (70), Expect = 0.39
 Identities = 14/26 (53%), Positives = 15/26 (56%)
 Frame = +1

Query: 242 IPVTSASSSSSSTNNSVHPKFKWEHF 267
           +P TS S   S TN S  PKF WE F
Sbjct: 1   VPSTSPSPHPSETNKSGPPKFNWEFF 78


>TC220013 similar to UP|O81998 (O81998) Transcription factor VSF-1, partial
           (29%)
          Length = 1572

 Score = 31.2 bits (69), Expect = 0.51
 Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
 Frame = +3

Query: 148 VETLDMLKIKNSNGGHVP-KKKPQQKVKLPPIDEQLEGMSIGNHKLQPSLEQQSQRNSNG 206
           VE+++ +  +NS+   VP  + P QK  +PP        S  N  + PS    S+ +   
Sbjct: 24  VESMEGVDQRNSSAFGVPVPRPPNQKHGIPP--------SHPNINISPSATPCSRYS--- 170

Query: 207 NSQVFQQLQHKPSTNSTSEVVVTTKWETFDSLPPLIP----VTSASSSSSSTNNSV 258
                Q+L+   S++S S  +  +   + DSLPPL P    VTS   S S+T+ SV
Sbjct: 171 -----QRLRSPGSSHSRS--LSQSPIFSLDSLPPLSPSPSAVTSMFDSISTTDMSV 317


>TC215968 similar to UP|Q9LLM3 (Q9LLM3) MTD1, partial (19%)
          Length = 942

 Score = 30.8 bits (68), Expect = 0.67
 Identities = 22/78 (28%), Positives = 37/78 (47%)
 Frame = +1

Query: 26  FYKNKERDSKAFLDIVGVKDKSKLVVMEDPIAQEKRYLEMRKNIKMERAAKSISEISLEV 85
           FY  K R   +  D        ++V  EDP A++++ L + +N  +ER ++S + I    
Sbjct: 340 FYSGKSRSFTSLADAAAASSMEEIVKPEDPYAKKRKNL-IARNSSIER-SRSCANI---- 501

Query: 86  DRLAGQVSALETIISKGG 103
               G +S   T I +GG
Sbjct: 502 ----GGISKRPTNIGRGG 543


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.311    0.129    0.350 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,624,895
Number of Sequences: 63676
Number of extensions: 117124
Number of successful extensions: 1058
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of query: 268
length of database: 12,639,632
effective HSP length: 96
effective length of query: 172
effective length of database: 6,526,736
effective search space: 1122598592
effective search space used: 1122598592
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)


Medicago: description of AC149494.2