BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149471.21 - phase: 0
(281 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC219496 416 e-117
TC219497 320 3e-88
TC227194 similar to UP|Q8T5S8 (Q8T5S8) Prolyl 4-hydroxylase alph... 200 7e-52
TC232158 194 3e-50
TC216902 similar to UP|Q8LAN3 (Q8LAN3) Prolyl 4-hydroxylase alph... 189 9e-49
TC228929 169 1e-42
TC229833 110 7e-25
TC222832 similar to UP|Q75ZI4 (Q75ZI4) Prolyl 4-hydroxylase, par... 100 1e-21
BE822836 97 6e-21
TC227193 similar to UP|Q9FKX6 (Q9FKX6) Prolyl 4-hydroxylase, alp... 84 5e-17
AW472148 75 3e-14
BI971299 74 1e-13
TC227195 73 1e-13
BE823168 73 1e-13
TC222092 similar to UP|Q8VZD7 (Q8VZD7) AT3g28480/MFJ20_16, parti... 72 2e-13
TC222216 similar to UP|Q9LSI6 (Q9LSI6) Prolyl 4-hydroxylase alph... 70 8e-13
TC222148 weakly similar to UP|Q75ZI4 (Q75ZI4) Prolyl 4-hydroxyla... 67 1e-11
BM521712 similar to GP|21618073|gb| prolyl 4-hydroxylase alpha s... 61 6e-10
AW278519 37 0.013
TC234894 weakly similar to UP|ELK3_HUMAN (P41970) ETS-domain pro... 33 0.11
>TC219496
Length = 910
Score = 416 bits (1070), Expect = e-117
Identities = 197/231 (85%), Positives = 213/231 (91%)
Frame = +1
Query: 50 LPRGYTYWNNNNDKEAQILRLGYVKPEVLSWSPRIILLHNFLSYEECDYLRGVALPRLKI 109
LPRG +WNN DKEA+ILRLGYVKPEVL+WSPRIILLHNFLS EECDYLR +ALPRL I
Sbjct: 67 LPRGIPFWNN--DKEAEILRLGYVKPEVLNWSPRIILLHNFLSMEECDYLRALALPRLHI 240
Query: 110 STVVDANTGKGIKSDVRTSSGMFLSHEERKYPMIHAIEKRISVYSQIPIENGELMQVLRY 169
STVVD TGKGIKSDVRTSSGMFL+ +ERKYPM+ AIEKRISVYSQIPIENGELMQVLRY
Sbjct: 241 STVVDTKTGKGIKSDVRTSSGMFLNSKERKYPMVQAIEKRISVYSQIPIENGELMQVLRY 420
Query: 170 EKNQYYRPHHDYFSDTFNLKRGGQRIATMLMYLGDNVEGGETHFPSAGSDECSCGGKLTK 229
EKNQYY+PHHDYFSDTFNLKRGGQRIATMLMYL DN+EGGET+FP AGS ECSCGGKL K
Sbjct: 421 EKNQYYKPHHDYFSDTFNLKRGGQRIATMLMYLSDNIEGGETYFPLAGSGECSCGGKLVK 600
Query: 230 GLCVKPVKGNAVLFWSMGLDGQSDPDSVHGGCPVLAGEKWSATKWMRQSVH 280
GL VKP+KGNAVLFWSMGLDGQSDP+SVHGGC V++GEKWSATKW+RQ+ H
Sbjct: 601 GLSVKPIKGNAVLFWSMGLDGQSDPNSVHGGCEVISGEKWSATKWLRQTTH 753
>TC219497
Length = 770
Score = 320 bits (821), Expect = 3e-88
Identities = 150/175 (85%), Positives = 161/175 (91%)
Frame = +3
Query: 106 RLKISTVVDANTGKGIKSDVRTSSGMFLSHEERKYPMIHAIEKRISVYSQIPIENGELMQ 165
R IS VVD TGKGIKSDVRTSSGMFL+ +ERKYPM+ AIEKRISVYSQIPIENGELMQ
Sbjct: 18 RXHISNVVDTKTGKGIKSDVRTSSGMFLNPQERKYPMVQAIEKRISVYSQIPIENGELMQ 197
Query: 166 VLRYEKNQYYRPHHDYFSDTFNLKRGGQRIATMLMYLGDNVEGGETHFPSAGSDECSCGG 225
VLRYEKNQYY+PHHDYFSDTFNLKRGGQRIATMLMYL DN+EGGET+FP AGS ECSCGG
Sbjct: 198 VLRYEKNQYYKPHHDYFSDTFNLKRGGQRIATMLMYLSDNIEGGETYFPLAGSGECSCGG 377
Query: 226 KLTKGLCVKPVKGNAVLFWSMGLDGQSDPDSVHGGCPVLAGEKWSATKWMRQSVH 280
KL KGL VKP+KGNAVLFWSMGLDGQSDP+SVHGGC V++GEKWSATKWMRQ+ H
Sbjct: 378 KLVKGLSVKPIKGNAVLFWSMGLDGQSDPNSVHGGCEVISGEKWSATKWMRQTTH 542
>TC227194 similar to UP|Q8T5S8 (Q8T5S8) Prolyl 4-hydroxylase alpha-related
protein PH4[alpha]PV (CG31015-PA), partial (4%)
Length = 965
Score = 200 bits (508), Expect = 7e-52
Identities = 107/193 (55%), Positives = 129/193 (66%), Gaps = 9/193 (4%)
Frame = +1
Query: 95 ECDYLRGVALPRLKISTVVDANTGKGIKSDVRTSSGMFLSHEERKYPMIHAIEKRISVYS 154
EC+YL +A P + STVVD+ TGK S VRTSSG FL+ K ++ IEKRI+ YS
Sbjct: 1 ECEYLIDIAKPSMHKSTVVDSETGKSKDSRVRTSSGTFLARGRDK--IVRDIEKRIAHYS 174
Query: 155 QIPIENGELMQVLRYEKNQYYRPHHDYFSDTFNLKRGGQRIATMLMYLGDNVEGGETHFP 214
IP+E+GE +QVL YE Q Y PH+DYF D FN K GGQRIAT+LMYL D EGGET FP
Sbjct: 175 FIPVEHGEGLQVLHYEVGQKYEPHYDYFLDDFNTKNGGQRIATVLMYLTDVEEGGETVFP 354
Query: 215 SAGSDECS---------CGGKLTKGLCVKPVKGNAVLFWSMGLDGQSDPDSVHGGCPVLA 265
+A + S CG KGL +KP +G+A+LFWSM D DP S+HGGCPV+
Sbjct: 355 AAKGNFSSVPWWNELSECG---KKGLSIKPKRGDALLFWSMKPDATLDPSSLHGGCPVIK 525
Query: 266 GEKWSATKWMRQS 278
G KWS+TKWMR S
Sbjct: 526 GNKWSSTKWMRVS 564
>TC232158
Length = 904
Score = 194 bits (494), Expect = 3e-50
Identities = 101/205 (49%), Positives = 132/205 (64%), Gaps = 8/205 (3%)
Frame = +2
Query: 79 SWSPRIILLHNFLSYEECDYLRGVALPRLKISTVVDANTGKGIKSDVRTSSGMFLSHEER 138
SW P L HNFL+ EEC+YL +A P ++ STV D +G+ + DVR S+G FL +
Sbjct: 215 SWQPTAFLYHNFLTKEECEYLINIATPHMQKSTVADNQSGQSVVHDVRKSTGAFLDRGQD 394
Query: 139 KYPMIHAIEKRISVYSQIPIENGELMQVLRYEKNQYYRPHHDYFSDTFNLKRGGQRIATM 198
+ ++ IEKRI+ + IPIENGE + V+ YE QYY PH+DYF D FN++ GGQRIATM
Sbjct: 395 E--IVRNIEKRIADVTFIPIENGEPIYVIHYEVGQYYDPHYDYFIDDFNIENGGQRIATM 568
Query: 199 LMYLGDNVEGGETHFPSAGS--------DECSCGGKLTKGLCVKPVKGNAVLFWSMGLDG 250
LMYL + EGGET FP A + +E S GK+ GL +KP G+A+LFWSM +
Sbjct: 569 LMYLSNVEEGGETMFPRAKANFSSVPWWNELSNCGKM--GLSIKPKMGDALLFWSMKPNA 742
Query: 251 QSDPDSVHGGCPVLAGEKWSATKWM 275
D ++H CPV+ G KWS TKWM
Sbjct: 743 TLDALTLHSACPVIKGNKWSCTKWM 817
>TC216902 similar to UP|Q8LAN3 (Q8LAN3) Prolyl 4-hydroxylase alpha
subunit-like protein, partial (89%)
Length = 1381
Score = 189 bits (481), Expect = 9e-49
Identities = 105/230 (45%), Positives = 141/230 (60%), Gaps = 11/230 (4%)
Frame = +3
Query: 57 WNNNNDKEAQILRLGYVKPEVLSWSPRIILLHNFLSYEECDYLRGVALPRLKISTVVDAN 116
W++ + ++ VK +SW PR + FL+ ECD+L +A LK S V D
Sbjct: 243 WSSYAGSASSVINPSKVKQ--ISWKPRAFVYEGFLTDLECDHLISLAKSELKRSAVADNL 416
Query: 117 TGKGIKSDVRTSSGMFLSHEERKYPMIHAIEKRISVYSQIPIENGELMQVLRYEKNQYYR 176
+G+ SDVRTSSGMF+S + K P++ IE +IS ++ +P ENGE +QVLRYE Q Y
Sbjct: 417 SGESQLSDVRTSSGMFIS--KNKDPIVAGIEDKISSWTFLPKENGEDIQVLRYEHGQKYD 590
Query: 177 PHHDYFSDTFNLKRGGQRIATMLMYLGDNVEGGETHFPSA-----------GSDECSCGG 225
PH+DYF+D N+ RGG RIAT+LMYL D +GGET F SA SD C
Sbjct: 591 PHYDYFTDKVNIARGGHRIATVLMYLTDVAKGGETVFXSAEEPPRRRGAETSSDLSECA- 767
Query: 226 KLTKGLCVKPVKGNAVLFWSMGLDGQSDPDSVHGGCPVLAGEKWSATKWM 275
KG+ VKP +G+A+LF+S+ + D S+H GCPV+ GEKWSATKW+
Sbjct: 768 --KKGIAVKPRRGDALLFFSLHTNATPDTSSLHAGCPVIEGEKWSATKWI 911
>TC228929
Length = 979
Score = 169 bits (429), Expect = 1e-42
Identities = 90/160 (56%), Positives = 107/160 (66%), Gaps = 6/160 (3%)
Frame = +3
Query: 122 KSDVRTSSGMFLSHEERKYPMIHAIEKRISVYSQIPIENGELMQVLRYEKNQYYRPHHDY 181
+S VRTSSGMFL K +I IEKRI+ ++ IP ENGE +Q+L YE Q Y PH+DY
Sbjct: 9 ESRVRTSSGMFLKRGRDK--IIQNIEKRIADFTFIPEENGEGLQILHYEVGQKYEPHYDY 182
Query: 182 FSDTFNLKRGGQRIATMLMYLGDNVEGGETHFPSAGSDECS------CGGKLTKGLCVKP 235
F D FN K GGQRIAT+LMYL D EGGET FP+A ++ S KGL VKP
Sbjct: 183 FLDEFNTKNGGQRIATVLMYLSDVEEGGETVFPAANANFSSVPWWNDLSQCARKGLSVKP 362
Query: 236 VKGNAVLFWSMGLDGQSDPDSVHGGCPVLAGEKWSATKWM 275
G+A+LFWSM D DP S+HGGCPV+ G KWS+TKWM
Sbjct: 363 KMGDALLFWSMRPDATLDPSSLHGGCPVIKGNKWSSTKWM 482
>TC229833
Length = 1265
Score = 110 bits (275), Expect = 7e-25
Identities = 69/199 (34%), Positives = 108/199 (53%), Gaps = 2/199 (1%)
Frame = +3
Query: 78 LSWSPRIILLHNFLSYEECDYLRGVALPRLKISTVVDANTGKG-IKSDVRTSSGMFLSHE 136
+SW PR+ L FLS +ECDYL +A V + ++G G + V TS M
Sbjct: 294 ISWQPRVFLYKGFLSDKECDYLVSLAY------AVKEKSSGNGGLSEGVETSLDM----- 440
Query: 137 ERKYPMIHAIEKRISVYSQIPIENGELMQVLRYEKNQYYRPHHDYFSDTFNLKRGGQRIA 196
+ ++ IE+R+SV++ +P E + +QV+ Y Q R + DYF++ L+ G +A
Sbjct: 441 --EDDILARIEERLSVWAFLPKEYSKPLQVMHYGPEQNGR-NLDYFTNKTQLELSGPLMA 611
Query: 197 TMLMYLGDNV-EGGETHFPSAGSDECSCGGKLTKGLCVKPVKGNAVLFWSMGLDGQSDPD 255
T+++YL ++V +GG+ FP + S ++PVKGNA+LF+S+ D
Sbjct: 612 TIILYLSNDVTQGGQILFPESVPGSSSWSSCSNSSNILQPVKGNAILFFSLHPSASPDKS 791
Query: 256 SVHGGCPVLAGEKWSATKW 274
S H CPVL G+ WSA K+
Sbjct: 792 SFHARCPVLEGDMWSAIKY 848
>TC222832 similar to UP|Q75ZI4 (Q75ZI4) Prolyl 4-hydroxylase, partial (57%)
Length = 619
Score = 100 bits (248), Expect = 1e-21
Identities = 58/141 (41%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Frame = +1
Query: 76 EVLSWSPRIILLHNFLSYEECDYLRGVALPRLKISTVV--DANTGKGIKSDVRTSSGMFL 133
+VLSW PR + NF + E+C+ + VA LK ST+ T K +RTSSG+F+
Sbjct: 163 QVLSWRPRAVYFPNFATAEQCESIIDVAKDGLKPSTLALRQGETEDNTKG-IRTSSGVFV 339
Query: 134 SHEERKYPMIHAIEKRISVYSQIPIENGELMQVLRYEKNQYYRPHHDYFSDTFNLKRGGQ 193
S E K + IE++I+ + IP +GE +LRYE NQ Y H+D F+ + Q
Sbjct: 340 SASEDKTRTLDVIEEKIARATMIPRSHGEAFNILRYEVNQRYNSHYDAFNPAEYGPQKSQ 519
Query: 194 RIATMLMYLGDNVEGGETHFP 214
R+A+ L+YL D EGGET FP
Sbjct: 520 RMASFLLYLTDVEEGGETMFP 582
>BE822836
Length = 610
Score = 97.4 bits (241), Expect = 6e-21
Identities = 52/122 (42%), Positives = 71/122 (57%), Gaps = 2/122 (1%)
Frame = -2
Query: 156 IPIENGELMQVLRYEKNQYYRPHHDYFSDTFNLKRGGQRIATMLMYLGDNVEGGETHFPS 215
IP +G + +L+YE Q Y H+D F+ QRIA+ L+YL + GGET FP
Sbjct: 606 IPXTHGXIFNILKYEVXQKYDSHYDAFNPDEYXXVESQRIASFLLYLSNVEAGGETMFPY 427
Query: 216 AGSDECSCGGKLTK--GLCVKPVKGNAVLFWSMGLDGQSDPDSVHGGCPVLAGEKWSATK 273
G G K GL VKP +G+ +LF+S+ +G+ D S+HG CPV+ GEKW ATK
Sbjct: 426 EGGLNIDRGYDYQKCIGLKVKPRQGDGLLFYSLLPNGKIDKTSLHGSCPVIKGEKWVATK 247
Query: 274 WM 275
W+
Sbjct: 246 WI 241
>TC227193 similar to UP|Q9FKX6 (Q9FKX6) Prolyl 4-hydroxylase, alpha
subunit-like protein, partial (41%)
Length = 557
Score = 84.3 bits (207), Expect = 5e-17
Identities = 44/84 (52%), Positives = 57/84 (67%)
Frame = +1
Query: 76 EVLSWSPRIILLHNFLSYEECDYLRGVALPRLKISTVVDANTGKGIKSDVRTSSGMFLSH 135
EV+SW PR + HNFL+ EEC+YL +A P + S+VVD+ TGK S VRTSSG FL+
Sbjct: 310 EVVSWEPRAFVYHNFLTKEECEYLIDIAKPNMHKSSVVDSETGKSKDSRVRTSSGTFLAR 489
Query: 136 EERKYPMIHAIEKRISVYSQIPIE 159
K ++ IEKRI+ YS IP+E
Sbjct: 490 GRDK--IVRDIEKRIAHYSFIPVE 555
>AW472148
Length = 391
Score = 75.1 bits (183), Expect = 3e-14
Identities = 42/125 (33%), Positives = 70/125 (55%)
Frame = +2
Query: 78 LSWSPRIILLHNFLSYEECDYLRGVALPRLKISTVVDANTGKGIKSDVRTSSGMFLSHEE 137
+SW PR + FL+ ECD+ +A LK S V D + + S++ TSS MF+ +
Sbjct: 8 VSWKPRAFVYEGFLTESECDHFMSIAKSDLKRSAVADNLSSESKVSEITTSSCMFIPNNN 187
Query: 138 RKYPMIHAIEKRISVYSQIPIENGELMQVLRYEKNQYYRPHHDYFSDTFNLKRGGQRIAT 197
++ +IE +IS ++ +PIEN E +Q+L E Y PH+DY ++ ++ R R +
Sbjct: 188 DL--IVASIEYKISSWTFLPIENEEDIQILICEHGHKYHPHYDYCANKVHITRCTHRSSH 361
Query: 198 MLMYL 202
+L+ L
Sbjct: 362 ILISL 376
>BI971299
Length = 669
Score = 73.6 bits (179), Expect = 1e-13
Identities = 44/130 (33%), Positives = 67/130 (50%), Gaps = 1/130 (0%)
Frame = -1
Query: 146 IEKRISVYSQIPIENGELMQVLRYEKNQYYRPHHDYFSDTFNLKRGGQRIATMLMYLGDN 205
IE+R+S + E + QV+ Y R + DYF+ L+ G +AT+++YL +
Sbjct: 639 IEERLSXXXXLXXEYSKPXQVMHYGPEPNGR-NLDYFTXKTQLELSGPLMATIVLYLSNA 463
Query: 206 V-EGGETHFPSAGSDECSCGGKLTKGLCVKPVKGNAVLFWSMGLDGQSDPDSVHGGCPVL 264
+GG+ FP + S ++PVKGNA+LF+S+ D +S H CPVL
Sbjct: 462 ATQGGQILFPESVPRSSSWSSCSNSSNILQPVKGNAILFFSLHPSASPDKNSFHARCPVL 283
Query: 265 AGEKWSATKW 274
G WSA K+
Sbjct: 282 EGNMWSAIKY 253
>TC227195
Length = 594
Score = 73.2 bits (178), Expect = 1e-13
Identities = 36/62 (58%), Positives = 44/62 (70%)
Frame = +2
Query: 217 GSDECSCGGKLTKGLCVKPVKGNAVLFWSMGLDGQSDPDSVHGGCPVLAGEKWSATKWMR 276
G +E S GK KGL +KP +G+A+LFWSM D DP S+HGGCPV+ G K S+TKWMR
Sbjct: 8 GWNELSECGK--KGLSIKPKRGDALLFWSMKPDATLDPSSLHGGCPVIKGNKGSSTKWMR 181
Query: 277 QS 278
S
Sbjct: 182 VS 187
>BE823168
Length = 654
Score = 73.2 bits (178), Expect = 1e-13
Identities = 39/89 (43%), Positives = 52/89 (57%), Gaps = 8/89 (8%)
Frame = -1
Query: 195 IATMLMYLGDNVEGGETHFPSAGSDECSCGGKLT--------KGLCVKPVKGNAVLFWSM 246
+A LMYL D +GGET F A G + KG+ VKP +G+A+LF+S+
Sbjct: 654 VAXXLMYLTDVXKGGETVFXDAXXSPRHKGSETNENLXECAQKGIAVKPRRGDALLFFSL 475
Query: 247 GLDGQSDPDSVHGGCPVLAGEKWSATKWM 275
+ D S+H GCPV+ GEKWSATKW+
Sbjct: 474 YPNAIPDTLSLHAGCPVIEGEKWSATKWI 388
>TC222092 similar to UP|Q8VZD7 (Q8VZD7) AT3g28480/MFJ20_16, partial (26%)
Length = 455
Score = 72.4 bits (176), Expect = 2e-13
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 10/82 (12%)
Frame = +2
Query: 207 EGGETHFPSAGS----------DECSCGGKLTKGLCVKPVKGNAVLFWSMGLDGQSDPDS 256
+GGET FP+A + EC+ KG VKP KG+A+LF+ + LD +D S
Sbjct: 8 KGGETIFPNAEAKLLQPKDESWSECA-----HKGYAVKPRKGDALLFFILHLDASTDTKS 172
Query: 257 VHGGCPVLAGEKWSATKWMRQS 278
+HG CPV+ GEKWSATKW+ S
Sbjct: 173 LHGSCPVIEGEKWSATKWIHVS 238
>TC222216 similar to UP|Q9LSI6 (Q9LSI6) Prolyl 4-hydroxylase alpha
subunit-like protein, partial (27%)
Length = 573
Score = 70.5 bits (171), Expect = 8e-13
Identities = 38/80 (47%), Positives = 53/80 (65%)
Frame = +1
Query: 78 LSWSPRIILLHNFLSYEECDYLRGVALPRLKISTVVDANTGKGIKSDVRTSSGMFLSHEE 137
LSWSPR L FLS EECD+L +A +L+ S V D +GK I S+VRTSSGMFL+ +
Sbjct: 340 LSWSPRAFLYKGFLSEEECDHLITLAKDKLEKSMVADNESGKSIMSEVRTSSGMFLNKAQ 519
Query: 138 RKYPMIHAIEKRISVYSQIP 157
+ ++ IE RI+ ++ +P
Sbjct: 520 DE--IVAGIEARIAAWTFLP 573
>TC222148 weakly similar to UP|Q75ZI4 (Q75ZI4) Prolyl 4-hydroxylase, partial
(40%)
Length = 619
Score = 66.6 bits (161), Expect = 1e-11
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Frame = +1
Query: 73 VKPEVLSWSPRIILLHNFLSYEECDYLRGVALPRLKISTVV--DANTGKGIKSDVRTSSG 130
+ ++LSW PR + NF S E C + +A P+L+ S + T + K D RTSSG
Sbjct: 322 IPSQILSWRPRAVFFPNFTSVEVCQQIIEMAKPKLEPSKLALRKGETAESTK-DTRTSSG 498
Query: 131 MFLSHEERKYPMIHAIEKRISVYSQIPIENGELMQVLRYE 170
F+S E K ++ +E++I+ + IP +GE+ +L+YE
Sbjct: 499 TFISASEDKSGILDLVERKIAKVTMIPRTHGEIFNILKYE 618
>BM521712 similar to GP|21618073|gb| prolyl 4-hydroxylase alpha subunit-like
protein {Arabidopsis thaliana}, partial (30%)
Length = 412
Score = 60.8 bits (146), Expect = 6e-10
Identities = 33/84 (39%), Positives = 51/84 (60%)
Frame = +1
Query: 74 KPEVLSWSPRIILLHNFLSYEECDYLRGVALPRLKISTVVDANTGKGIKSDVRTSSGMFL 133
K + +SW PR + FL+ ECD+L +A LK S V D +G+ S+VRTSSGMF+
Sbjct: 154 KVKQVSWKPRAFVYDVFLTELECDHLISIAKSELKRSAVADNLSGESKLSEVRTSSGMFI 333
Query: 134 SHEERKYPMIHAIEKRISVYSQIP 157
+ K P++ +E +IS ++ +P
Sbjct: 334 --PKNKDPIVAGVEDKISSWTLLP 399
>AW278519
Length = 288
Score = 36.6 bits (83), Expect = 0.013
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 259 GGCPVLAGEKWSATKWMR 276
G CPV+ GEKW ATKW+R
Sbjct: 6 GSCPVIKGEKWVATKWIR 59
>TC234894 weakly similar to UP|ELK3_HUMAN (P41970) ETS-domain protein Elk-3
(ETS-related protein NET) (ETS-related protein ERP) (SRF
accessory protein 2) (SAP-2), partial (5%)
Length = 408
Score = 33.5 bits (75), Expect = 0.11
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 159 ENGELMQVLRYEKNQYYRPHHDY 181
E+GE + V+RY QYY PH DY
Sbjct: 339 EHGEPLHVIRYAVGQYYEPHVDY 407
Score = 30.8 bits (68), Expect = 0.72
Identities = 12/17 (70%), Positives = 13/17 (75%)
Frame = +1
Query: 76 EVLSWSPRIILLHNFLS 92
EV+SW PR L HNFLS
Sbjct: 292 EVMSWEPRAFLYHNFLS 342
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.320 0.138 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,583,970
Number of Sequences: 63676
Number of extensions: 191197
Number of successful extensions: 948
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of query: 281
length of database: 12,639,632
effective HSP length: 96
effective length of query: 185
effective length of database: 6,526,736
effective search space: 1207446160
effective search space used: 1207446160
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC149471.21