BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149209.4 + phase: 0 /pseudo
(205 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BE329537 weakly similar to GP|9757730|dbj| salt-inducible protei... 135 1e-32
BQ785931 weakly similar to GP|22128589|gb| fertility restorer-li... 57 8e-09
TC222623 similar to UP|Q9LIL5 (Q9LIL5) Gb|AAF27119.1, partial (36%) 55 2e-08
TC231779 weakly similar to UP|Q9SGV7 (Q9SGV7) F1N19.15, partial ... 55 2e-08
TC221937 similar to UP|Q8VZE4 (Q8VZE4) AT4g01570/T15B16_21, part... 55 2e-08
AW132315 weakly similar to GP|6630464|gb| F23N19.4 {Arabidopsis ... 54 5e-08
TC235093 similar to UP|Q8MZ21 (Q8MZ21) RE13473p, partial (8%) 54 5e-08
TC210974 similar to UP|Q6K9W7 (Q6K9W7) Pentatricopeptide (PPR) r... 54 5e-08
AW507532 53 8e-08
TC219923 similar to UP|Q9FMF6 (Q9FMF6) Gb|AAF15929.1, partial (10%) 52 2e-07
TC209869 similar to UP|Q9LG03 (Q9LG03) F20N2.6, partial (33%) 52 2e-07
TC230247 weakly similar to GB|AAP88326.1|32815835|BT009692 At1g6... 50 9e-07
BI424784 weakly similar to GP|21741712|em oj991113_30.17 {Oryza ... 48 4e-06
TC231968 47 6e-06
TC234899 weakly similar to UP|Q9LUJ4 (Q9LUJ4) Gb|AAF26800.1, par... 47 6e-06
TC223382 weakly similar to UP|Q9SFV9 (Q9SFV9) T1B9.4 protein, pa... 45 2e-05
TC222343 45 2e-05
AI736610 43 1e-04
BG882595 weakly similar to GP|3107905|dbj| leaf protein {Ipomoea... 42 2e-04
TC213874 similar to GB|BAC92425.1|35215067|AP004458 chloroplast ... 40 4e-04
>BE329537 weakly similar to GP|9757730|dbj| salt-inducible protein-like
{Arabidopsis thaliana}, partial (8%)
Length = 471
Score = 135 bits (341), Expect = 1e-32
Identities = 66/106 (62%), Positives = 76/106 (71%)
Frame = +2
Query: 1 MNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMC 60
MNFYC DV C A + A+ I G IYRSGE P VVTYSTYI GLCK G++ LI N+
Sbjct: 149 MNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLH 328
Query: 61 RENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGY 106
NQP+N+H FN +YG C+RGE+ EA QVLEEMKS GILPDVY Y
Sbjct: 329 YTNQPLNSHSFNDGIYGFCKRGEVFEALQVLEEMKSSGILPDVYSY 466
Score = 74.3 bits (181), Expect = 4e-14
Identities = 47/104 (45%), Positives = 56/104 (53%), Gaps = 19/104 (18%)
Frame = +2
Query: 118 EVDIMSCNFLLKCLVDANRVGDDD---DDDDDDGVS----------------VSVSADIS 158
E DI +CNFLLKCLV+ANRV ++ D G S V A +
Sbjct: 14 EPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMR 193
Query: 159 PASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNM 202
A+ I G IYRSGE P VVTYSTYI GLCK G++ LI N+
Sbjct: 194 QAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNL 325
>BQ785931 weakly similar to GP|22128589|gb| fertility restorer-like protein
{Petunia x hybrida}, partial (5%)
Length = 421
Score = 56.6 bits (135), Expect = 8e-09
Identities = 40/169 (23%), Positives = 69/169 (40%)
Frame = +3
Query: 20 IFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLC 79
++ ++ G P+V TY+ I G C G R V +L+C+M N +N + +N ++ LC
Sbjct: 3 LYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALC 182
Query: 80 QRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGD 139
++G L +A + M G PD+ + ++ CL +
Sbjct: 183 KKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSG----------------YCLYN------ 296
Query: 140 DDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCK 188
D+ A ++F G TP+V +Y+ I G CK
Sbjct: 297 ----------------DVVEARKLFDTFAECGITPDVWSYNILIIGYCK 395
Score = 33.9 bits (76), Expect = 0.053
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 163 IFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNM 202
++ ++ G P+V TY+ I G C G R V +L+C+M
Sbjct: 3 LYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDM 122
Score = 31.2 bits (69), Expect = 0.34
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +3
Query: 28 GETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEA 87
G+ P++VT++T + G C + KL + +N ++ G C+ +DEA
Sbjct: 237 GQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEA 416
Score = 26.9 bits (58), Expect = 6.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 13 DISPASEIFGNIYRSGETPNVVTYSTYIKGLCK 45
D+ A ++F G TP+V +Y+ I G CK
Sbjct: 297 DVVEARKLFDTFAECGITPDVWSYNILIIGYCK 395
>TC222623 similar to UP|Q9LIL5 (Q9LIL5) Gb|AAF27119.1, partial (36%)
Length = 1017
Score = 55.1 bits (131), Expect = 2e-08
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 17/187 (9%)
Frame = +2
Query: 36 YSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVLEEMK 95
+ T + LC+ + L N ++ + +N I+ G C G EA +V ++
Sbjct: 11 FRTLLMWLCRYKHVEDAEALFHNSVKKGLRADIKMWNVILNGWCVLGNSHEAKRVWRDIV 190
Query: 96 SIGILPDVYGYYVFVNAK-----------------DVGIEVDIMSCNFLLKCLVDANRVG 138
+ PD++ Y F+ A D G + D++ CN C++DA
Sbjct: 191 ASPCKPDIFTYATFIKALTKKGKLGTALKLFRGMWDKGGKPDVVICN----CIIDA---- 346
Query: 139 DDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKL 198
+ I A EIF ++ G PNV TY++ IK +CK + V++L
Sbjct: 347 ------------LCFKKRIPEALEIFCDMSERGCEPNVATYNSLIKYMCKIQRMEKVYEL 490
Query: 199 ICNMCRE 205
+ M R+
Sbjct: 491 VDEMERK 511
Score = 41.2 bits (95), Expect = 3e-04
Identities = 33/96 (34%), Positives = 48/96 (49%), Gaps = 5/96 (5%)
Frame = +2
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCF-N 72
I A EIF ++ G PNV TY++ IK +CK + V++L+ M R+ C N
Sbjct: 365 IPEALEIFCDMSERGCEPNVATYNSLIKYMCKIQRMEKVYELVDEMERK----KGSCLPN 532
Query: 73 AIMYGLCQRG--ELDEASQVLEEMK--SIGILPDVY 104
A+ Y + E E +VLE M+ G+ DVY
Sbjct: 533 AVTYCYLLKSLKEPGEVCRVLERMERNGCGMNDDVY 640
Score = 37.7 bits (86), Expect = 0.004
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 14/150 (9%)
Frame = +2
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
+ A ++F ++ G P+VV + I LC + ++ C+M N +N+
Sbjct: 260 LGTALKLFRGMWDKGGKPDVVICNCIIDALCFKKRIPEALEIFCDMSERGCEPNVATYNS 439
Query: 74 IMYGLCQRGELDEASQVLEEM--KSIGILPDVYGY-YVFVNAKDVGIEVDIMSCNFLLKC 130
++ +C+ +++ ++++EM K LP+ Y Y+ + K+ G EV C L +
Sbjct: 440 LIKYMCKIQRMEKVYELVDEMERKKGSCLPNAVTYCYLLKSLKEPG-EV----CRVLER- 601
Query: 131 LVDANRVGDDDDD-----------DDDDGV 149
++ N G +DD DD DGV
Sbjct: 602 -MERNGCGMNDDVYNMVLRLYMKWDDGDGV 688
>TC231779 weakly similar to UP|Q9SGV7 (Q9SGV7) F1N19.15, partial (7%)
Length = 620
Score = 55.1 bits (131), Expect = 2e-08
Identities = 40/171 (23%), Positives = 66/171 (38%)
Frame = +1
Query: 22 GNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQR 81
G + P+ VTY++ I GLCK+G + L+ M QP + + +++ LC+
Sbjct: 1 GEMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKN 180
Query: 82 GELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDD 141
D+A+ + +MK I P +Y Y ++ G
Sbjct: 181 QNHDKATALFMKMKKRRIQPTMYTYTALIDGLCKG------------------------- 285
Query: 142 DDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSL 192
+ A E+F ++ G +V TY+ I GLCK G L
Sbjct: 286 -------------GRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGML 399
Score = 49.3 bits (116), Expect = 1e-06
Identities = 25/96 (26%), Positives = 50/96 (52%)
Frame = +1
Query: 17 ASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMY 76
A+ +F + + P + TY+ I GLCK G L+ +L ++ + I+ + ++
Sbjct: 196 ATALFMKMKKRRIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMIS 375
Query: 77 GLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA 112
GLC+ G LDEA + +M+ G +P+ + + + +
Sbjct: 376 GLCKEGMLDEALAMKSKMEDNGCIPNAVTFEIIIRS 483
Score = 45.8 bits (107), Expect = 1e-05
Identities = 25/101 (24%), Positives = 48/101 (46%)
Frame = +1
Query: 11 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHC 70
S I+ A + ++ G+ +VVTY++ + LCK + L M + +
Sbjct: 73 SGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNHDKATALFMKMKKRRIQPTMYT 252
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVN 111
+ A++ GLC+ G L A ++ + + G DV+ Y V ++
Sbjct: 253 YTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMIS 375
Score = 32.3 bits (72), Expect = 0.15
Identities = 30/135 (22%), Positives = 49/135 (36%)
Frame = +1
Query: 59 MCRENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIE 118
M +N + +N+++ GLC+ G + A ++ EM G DV Y
Sbjct: 7 MLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTY------------ 150
Query: 119 VDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVT 178
L+DA + D A+ +F + + P + T
Sbjct: 151 ----------TSLLDALCKNQNHDK----------------ATALFMKMKKRRIQPTMYT 252
Query: 179 YSTYIKGLCKAGSLR 193
Y+ I GLCK G L+
Sbjct: 253 YTALIDGLCKGGRLK 297
Score = 30.0 bits (66), Expect = 0.76
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 165 GNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNM 202
G + P+ VTY++ I GLCK+G + L+ M
Sbjct: 1 GEMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEM 114
>TC221937 similar to UP|Q8VZE4 (Q8VZE4) AT4g01570/T15B16_21, partial (22%)
Length = 801
Score = 55.1 bits (131), Expect = 2e-08
Identities = 47/186 (25%), Positives = 79/186 (42%)
Frame = +2
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
+S A ++F +G P TY++ + K G W ++ M + P + +N
Sbjct: 8 LSLACKLFEIFSDAGVDPVSYTYNSIMSSFVKKGYFAEAWAILTEMGEKFCPTDIATYNM 187
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVD 133
I+ GL + G D AS VL+ + G GY +DI+ N L+ L
Sbjct: 188 IIQGLGKMGRADLASAVLDRLLRQG------GY------------LDIVMYNTLINALGK 313
Query: 134 ANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLR 193
A+R+ + +++F + SG P+VVTY+T I+ KAG L+
Sbjct: 314 ASRIDE--------------------VNKLFEQMRSSGINPDVVTYNTLIEVHSKAGRLK 433
Query: 194 VVWKLI 199
+K +
Sbjct: 434 DAYKFL 451
>AW132315 weakly similar to GP|6630464|gb| F23N19.4 {Arabidopsis thaliana},
partial (5%)
Length = 411
Score = 53.9 bits (128), Expect = 5e-08
Identities = 28/93 (30%), Positives = 49/93 (52%)
Frame = +3
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
++ A + + + G P+V+TY+T I G C A L + L+ M +N + H F+
Sbjct: 105 VNEAYDFYSEMDARGIFPDVITYTTLICGXCLASQLMGAFSLLNEMILKNINPDVHTFSI 284
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPDVYGY 106
++ LC+ G++ EA +L M G+ P+V Y
Sbjct: 285 LIDALCKEGKVKEAKNLLAVMMKEGVKPNVVTY 383
Score = 40.4 bits (93), Expect = 6e-04
Identities = 34/157 (21%), Positives = 55/157 (34%)
Frame = +3
Query: 31 PNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQV 90
P+VV YST I LCK + + M + + ++ G C +L A +
Sbjct: 51 PDVVMYSTIIDSLCKDKLVNEAYDFYSEMDARGIFPDVITYTTLICGXCLASQLMGAFSL 230
Query: 91 LEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVS 150
L EM I PDV+ + + ++A
Sbjct: 231 LNEMILKNINPDVHTFSILIDA-------------------------------------- 296
Query: 151 VSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLC 187
+ + A + + + G PNVVTY+T + G C
Sbjct: 297 LCKEGKVKEAKNLLAVMMKEGVKPNVVTYNTLMDGYC 407
Score = 29.6 bits (65), Expect = 0.99
Identities = 14/46 (30%), Positives = 24/46 (51%)
Frame = +3
Query: 157 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNM 202
++ A + + + G P+V+TY+T I G C A L + L+ M
Sbjct: 105 VNEAYDFYSEMDARGIFPDVITYTTLICGXCLASQLMGAFSLLNEM 242
Score = 28.5 bits (62), Expect = 2.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLC 44
+ A + + + G PNVVTY+T + G C
Sbjct: 315 VKEAKNLLAVMMKEGVKPNVVTYNTLMDGYC 407
>TC235093 similar to UP|Q8MZ21 (Q8MZ21) RE13473p, partial (8%)
Length = 967
Score = 53.9 bits (128), Expect = 5e-08
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Frame = +2
Query: 11 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVW---KLICNMCRENQPIN 67
+A A +++ + SG +PN TY+ IKGL A ++ V K + M + N
Sbjct: 461 AAQPKEALKVYMRMLASGVSPNAYTYAVLIKGLAAAADVKFVKEASKYVLEMMDKGMKPN 640
Query: 68 NHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPD 102
+ + GL + +LDEA+++LE+MK G +PD
Sbjct: 641 VQTYACVFEGLVREEKLDEAARLLEQMKGKGFVPD 745
Score = 30.4 bits (67), Expect = 0.58
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 154 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVV 195
+A A +++ + SG +PN TY+ IKGL A ++ V
Sbjct: 461 AAQPKEALKVYMRMLASGVSPNAYTYAVLIKGLAAAADVKFV 586
>TC210974 similar to UP|Q6K9W7 (Q6K9W7) Pentatricopeptide (PPR)
repeat-containing protein-like, partial (3%)
Length = 637
Score = 53.9 bits (128), Expect = 5e-08
Identities = 32/90 (35%), Positives = 41/90 (45%)
Frame = +2
Query: 13 DISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFN 72
D+ A + F + + G PNVVTY T IKG K L +V K M N
Sbjct: 191 DMEGAEKFFKRLIQDGFEPNVVTYGTLIKGYAKINDLEMVMKKYEEMLMRGIKANQTILT 370
Query: 73 AIMYGLCQRGELDEASQVLEEMKSIGILPD 102
IM + G+ D A +EM+S GI PD
Sbjct: 371 TIMDAYGKSGDFDSAVHWFKEMESNGIPPD 460
Score = 38.5 bits (88), Expect = 0.002
Identities = 33/113 (29%), Positives = 46/113 (40%), Gaps = 5/113 (4%)
Frame = +2
Query: 90 VLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGV 149
V EEM GI P Y + ++A + V+ F + D D
Sbjct: 2 VFEEMLDAGIRPTRKAYNILLDAFSISGMVEQAQTVF--------KSMRRDRYFPDLCSY 157
Query: 150 SVSVSA-----DISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWK 197
+ +SA D+ A + F + + G PNVVTY T IKG K L +V K
Sbjct: 158 TTMLSAYINADDMEGAEKFFKRLIQDGFEPNVVTYGTLIKGYAKINDLEMVMK 316
>AW507532
Length = 396
Score = 53.1 bits (126), Expect = 8e-08
Identities = 44/145 (30%), Positives = 62/145 (42%), Gaps = 17/145 (11%)
Frame = +3
Query: 59 MCRENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVY-------GYY---- 107
M E H FN +++G+ LD A + E+MKS GILPDV GY+
Sbjct: 21 MLLEGVDPTRHTFNILLWGMFLSLRLDTAVRFYEDMKSRGILPDVVTYNTLINGYFRFKK 200
Query: 108 ------VFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPAS 161
+FV K I +++S +LK V A R+ D A
Sbjct: 201 VDEAEKLFVEMKGRDIVPNVISFTTMLKGYVAAGRIDD--------------------AL 320
Query: 162 EIFGNIYRSGETPNVVTYSTYIKGL 186
++F + G PNVVT+ST + GL
Sbjct: 321 KVFEEMKGCGVKPNVVTFSTLLPGL 395
Score = 45.8 bits (107), Expect = 1e-05
Identities = 28/93 (30%), Positives = 44/93 (47%)
Frame = +3
Query: 11 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHC 70
S + A + ++ G P+VVTY+T I G + + KL M + N
Sbjct: 87 SLRLDTAVRFYEDMKSRGILPDVVTYNTLINGYFRFKKVDEAEKLFVEMKGRDIVPNVIS 266
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGILPDV 103
F ++ G G +D+A +V EEMK G+ P+V
Sbjct: 267 FTTMLKGYVAAGRIDDALKVFEEMKGCGVKPNV 365
>TC219923 similar to UP|Q9FMF6 (Q9FMF6) Gb|AAF15929.1, partial (10%)
Length = 1238
Score = 52.0 bits (123), Expect = 2e-07
Identities = 24/92 (26%), Positives = 47/92 (51%)
Frame = +1
Query: 20 IFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLC 79
+F + G P +++ + I GLC+ G + K + +M + +N+++ GLC
Sbjct: 148 LFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLC 327
Query: 80 QRGELDEASQVLEEMKSIGILPDVYGYYVFVN 111
+ G + EAS + +++S GI PD Y ++
Sbjct: 328 KMGHVQEASNLFNKLQSEGIRPDAITYNTLIS 423
Score = 43.9 bits (102), Expect = 5e-05
Identities = 23/98 (23%), Positives = 48/98 (48%)
Frame = +1
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
++ A + ++ G TP++VTY++ I GLCK G ++ L + E + +N
Sbjct: 235 VNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNT 414
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVN 111
++ C G ++A +L + G +P+ + + +N
Sbjct: 415 LISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 528
Score = 38.5 bits (88), Expect(2) = 6e-07
Identities = 26/91 (28%), Positives = 39/91 (42%)
Frame = +1
Query: 103 VYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASE 162
V G +F GI I+SCN L+ L +V D A +
Sbjct: 133 VQGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVND--------------------ALK 252
Query: 163 IFGNIYRSGETPNVVTYSTYIKGLCKAGSLR 193
++ G TP++VTY++ I GLCK G ++
Sbjct: 253 FLQDMIHRGLTPDIVTYNSLINGLCKMGHVQ 345
Score = 31.2 bits (69), Expect(2) = 6e-07
Identities = 13/46 (28%), Positives = 24/46 (51%)
Frame = +2
Query: 35 TYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQ 80
TY+ I G CK G L +++ +M + +N +N ++ LC+
Sbjct: 2 TYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCK 139
>TC209869 similar to UP|Q9LG03 (Q9LG03) F20N2.6, partial (33%)
Length = 1085
Score = 51.6 bits (122), Expect = 2e-07
Identities = 33/129 (25%), Positives = 56/129 (42%)
Frame = +1
Query: 11 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHC 70
+ ++ F + ++ P+VV Y+ I G AG + ++ +M Q N
Sbjct: 220 AGNLDACKYFFDEMIKNECRPDVVAYTVMITGYVVAGEIEKALEMYQDMISREQVPNVFT 399
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKC 130
+N+I+ GLC G+ DEA +L+EM++ G P+ Y N L C
Sbjct: 400 YNSIIRGLCMAGKFDEACSMLKEMETKGCSPNSVVY------------------NTLASC 525
Query: 131 LVDANRVGD 139
L +A + D
Sbjct: 526 LRNAGKTAD 552
Score = 45.4 bits (106), Expect = 2e-05
Identities = 38/161 (23%), Positives = 71/161 (43%)
Frame = +1
Query: 45 KAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVY 104
+ G L +L+ M R + H FN +++ L + + A +L M+ +GI P V
Sbjct: 7 RLGKLDQFHRLLDEMGRNGFSPDFHTFNILLHVLGKGDKPFAALNLLNHMREMGIEPTVL 186
Query: 105 GYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIF 164
+ ++ +D +C + ++ N D V+ +I A E++
Sbjct: 187 HFTTLIDGLSRAGNLD--ACKYFFDEMIK-NECRPDVVAYTVMITGYVVAGEIEKALEMY 357
Query: 165 GNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRE 205
++ + PNV TY++ I+GLC AG + C+M +E
Sbjct: 358 QDMISREQVPNVFTYNSIIRGLCMAGK----FDEACSMLKE 468
Score = 42.4 bits (98), Expect = 1e-04
Identities = 22/84 (26%), Positives = 43/84 (51%)
Frame = +1
Query: 11 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHC 70
+ +I A E++ ++ + PNV TY++ I+GLC AG ++ M + N+
Sbjct: 325 AGEIEKALEMYQDMISREQVPNVFTYNSIIRGLCMAGKFDEACSMLKEMETKGCSPNSVV 504
Query: 71 FNAIMYGLCQRGELDEASQVLEEM 94
+N + L G+ +A +V+ +M
Sbjct: 505 YNTLASCLRNAGKTADAHEVIRQM 576
>TC230247 weakly similar to GB|AAP88326.1|32815835|BT009692 At1g61870
{Arabidopsis thaliana;} , partial (56%)
Length = 1291
Score = 49.7 bits (117), Expect = 9e-07
Identities = 24/81 (29%), Positives = 43/81 (52%)
Frame = +3
Query: 31 PNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQV 90
P++ TY+ I+ LCK L+ M + N+ + +++G C+ G+L+EA ++
Sbjct: 729 PSISTYNVRIQSLCKLKRSSEAKALLEGMVCNGRKPNSVSYACLIHGFCKEGDLEEAKRL 908
Query: 91 LEEMKSIGILPDVYGYYVFVN 111
+MK G LPD Y+ V+
Sbjct: 909 FRDMKRRGYLPDGECYFTLVH 971
Score = 49.7 bits (117), Expect = 9e-07
Identities = 40/174 (22%), Positives = 66/174 (36%)
Frame = +3
Query: 31 PNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQV 90
PN+ TY+T IK ++GS V+ ++ M + N N N + G + + D+ +V
Sbjct: 519 PNLDTYNTVIKAFAESGSTSSVYSVLAEMDKNNIAPNVTTLNNSLSGFYREKKFDDVGKV 698
Query: 91 LEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVS 150
L+ M+ + P + Y N ++ L R
Sbjct: 699 LKLMEKYSVFPSISTY------------------NVRIQSLCKLKR-------------- 782
Query: 151 VSVSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCR 204
S A + + +G PN V+Y+ I G CK G L +L +M R
Sbjct: 783 ------SSEAKALLEGMVCNGRKPNSVSYACLIHGFCKEGDLEEAKRLFRDMKR 926
>BI424784 weakly similar to GP|21741712|em oj991113_30.17 {Oryza sativa
(japonica cultivar-group)}, partial (2%)
Length = 336
Score = 47.8 bits (112), Expect = 4e-06
Identities = 25/94 (26%), Positives = 48/94 (50%)
Frame = +1
Query: 17 ASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMY 76
A E+F +++ G+ PN+ T + + GL K L + + N +N +N I+
Sbjct: 40 AKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILD 219
Query: 77 GLCQRGELDEASQVLEEMKSIGILPDVYGYYVFV 110
G+C G+L++A ++ + S G+ DV Y + +
Sbjct: 220 GMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMI 321
Score = 32.7 bits (73), Expect = 0.12
Identities = 15/66 (22%), Positives = 32/66 (47%)
Frame = +1
Query: 15 SPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAI 74
S A +F + + N++ Y+ + G+C +G L +L + + I+ +N +
Sbjct: 139 SEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIM 318
Query: 75 MYGLCQ 80
+ GLC+
Sbjct: 319 IKGLCK 336
Score = 32.3 bits (72), Expect = 0.15
Identities = 34/149 (22%), Positives = 56/149 (36%)
Frame = +1
Query: 40 IKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGI 99
I G+CKAG +L M + Q N I+ GL + EA + E++ +
Sbjct: 4 IGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNW 183
Query: 100 LPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVSADISP 159
+++I+ N +L + + ++ D
Sbjct: 184 ------------------DLNIIIYNIILDGMCSSGKLND-------------------- 249
Query: 160 ASEIFGNIYRSGETPNVVTYSTYIKGLCK 188
A E+F + G +VVTY+ IKGLCK
Sbjct: 250 ALELFSYLSSKGVKIDVVTYNIMIKGLCK 336
Score = 31.6 bits (70), Expect = 0.26
Identities = 15/35 (42%), Positives = 21/35 (59%)
Frame = +1
Query: 11 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCK 45
S ++ A E+F + G +VVTY+ IKGLCK
Sbjct: 232 SGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCK 336
>TC231968
Length = 610
Score = 47.0 bits (110), Expect = 6e-06
Identities = 26/88 (29%), Positives = 46/88 (51%)
Frame = +1
Query: 19 EIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGL 78
++F +I +G P+ V+Y+T I GL KAG + + M + + + AI+
Sbjct: 28 DVFASIKDTGFVPDTVSYNTXINGLRKAGRXDMCFVYFKEMTEKGVEPDLLTYTAIIEIF 207
Query: 79 CQRGELDEASQVLEEMKSIGILPDVYGY 106
+ G ++E+ + EMK G+LP +Y Y
Sbjct: 208 GRSGNVEESLKCFREMKLKGVLPSIYIY 291
Score = 30.4 bits (67), Expect = 0.58
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 162 EIFGNIYRSGETPNVVTYSTYIKGLCKAG 190
++F +I +G P+ V+Y+T I GL KAG
Sbjct: 28 DVFASIKDTGFVPDTVSYNTXINGLRKAG 114
>TC234899 weakly similar to UP|Q9LUJ4 (Q9LUJ4) Gb|AAF26800.1, partial (36%)
Length = 767
Score = 47.0 bits (110), Expect = 6e-06
Identities = 42/197 (21%), Positives = 82/197 (41%), Gaps = 21/197 (10%)
Frame = +2
Query: 27 SGETPNVVTYSTYIKGLCKAG----SLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRG 82
+G PN VTY+T + L KAG +L V K+ C+ C + P+ ++ +++ L + G
Sbjct: 26 NGCPPNAVTYTTVMLHLGKAGQLSKALEVYEKMKCDGCVADTPV----YSCMIFILGKAG 193
Query: 83 ELDEASQVLEEMKSIGILPDVYGYYVFVNA-----------------KDVGIEVDIMSCN 125
L +A V E+M G++ DV Y ++ +D + ++ + +
Sbjct: 194 RLKDACDVFEDMFKQGVVRDVVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVGTYH 373
Query: 126 FLLKCLVDANRVGDDDDDDDDDGVSVSVSADISPASEIFGNIYRSGETPNVVTYSTYIKG 185
LLK R + + +++++ +P++ TYS +
Sbjct: 374 PLLKMCCKKKR--------------------MKVLKFLLDHMFKNDISPDLATYSLLVNA 493
Query: 186 LCKAGSLRVVWKLICNM 202
LCK G + + + M
Sbjct: 494 LCKTGKVADAYSFLEEM 544
Score = 38.5 bits (88), Expect = 0.002
Identities = 23/99 (23%), Positives = 46/99 (46%)
Frame = +2
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNA 73
+ A ++F ++++ G +VVTY+T I C +L+ M + N ++
Sbjct: 197 LKDACDVFEDMFKQGVVRDVVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVGTYHP 376
Query: 74 IMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVNA 112
++ C++ + +L+ M I PD+ Y + VNA
Sbjct: 377 LLKMCCKKKRMKVLKFLLDHMFKNDISPDLATYSLLVNA 493
Score = 38.1 bits (87), Expect = 0.003
Identities = 21/71 (29%), Positives = 38/71 (52%)
Frame = +2
Query: 31 PNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQV 90
PNV TY +K CK ++V+ L+ +M + + + ++ ++ LC+ G++ +A
Sbjct: 353 PNVGTYHPLLKMCCKKKRMKVLKFLLDHMFKNDISPDLATYSLLVNALCKTGKVADAYSF 532
Query: 91 LEEMKSIGILP 101
LEEM G P
Sbjct: 533 LEEMVLKGFTP 565
Score = 27.3 bits (59), Expect = 4.9
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = +2
Query: 170 SGETPNVVTYSTYIKGLCKAG----SLRVVWKLICNMC 203
+G PN VTY+T + L KAG +L V K+ C+ C
Sbjct: 26 NGCPPNAVTYTTVMLHLGKAGQLSKALEVYEKMKCDGC 139
Score = 26.9 bits (58), Expect = 6.4
Identities = 9/40 (22%), Positives = 22/40 (54%)
Frame = +2
Query: 20 IFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNM 59
+ +++++ +P++ TYS + LCK G + + + M
Sbjct: 425 LLDHMFKNDISPDLATYSLLVNALCKTGKVADAYSFLEEM 544
>TC223382 weakly similar to UP|Q9SFV9 (Q9SFV9) T1B9.4 protein, partial (6%)
Length = 689
Score = 45.4 bits (106), Expect = 2e-05
Identities = 29/92 (31%), Positives = 42/92 (45%)
Frame = +3
Query: 41 KGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGIL 100
+G CK G L K+ +M + ++ GLC G DEA + EEM GI+
Sbjct: 6 RGYCKIGDLAEARKIFEDMRDRGYAETTVSYGTMISGLCLHGRTDEAQSLFEEMFQKGIV 185
Query: 101 PDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLV 132
PD+ Y + A + EV I+ LL L+
Sbjct: 186 PDLITYNCLIKA--LCKEVKIVKARKLLNLLL 275
Score = 39.3 bits (90), Expect = 0.001
Identities = 27/125 (21%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Frame = +3
Query: 17 ASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMY 76
A +F +++ G P+++TY+ IK LCK + KL+ + + ++ F+ ++
Sbjct: 144 AQSLFEEMFQKGIVPDLITYNCLIKALCKEVKIVKARKLLNLLLAQGLELSVFSFSPLIK 323
Query: 77 GLCQRGELDEASQVLEEMKSIGILP--DVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDA 134
LC G A + ++M + P ++G +N + + +L+ L
Sbjct: 324 QLCIVGNTKGAITLWKDMHDRLLEPTASIFGIEWLLNMLSWKQKPQKQTFEYLINSLSQE 503
Query: 135 NRVGD 139
NR+ D
Sbjct: 504 NRLDD 518
Score = 32.3 bits (72), Expect = 0.15
Identities = 21/78 (26%), Positives = 36/78 (45%), Gaps = 9/78 (11%)
Frame = +3
Query: 131 LVDANRVGDDDDDDDDDGVSVSVSADIS---------PASEIFGNIYRSGETPNVVTYST 181
L +A ++ +D D +VS IS A +F +++ G P+++TY+
Sbjct: 30 LAEARKIFEDMRDRGYAETTVSYGTMISGLCLHGRTDEAQSLFEEMFQKGIVPDLITYNC 209
Query: 182 YIKGLCKAGSLRVVWKLI 199
IK LCK + KL+
Sbjct: 210 LIKALCKEVKIVKARKLL 263
>TC222343
Length = 852
Score = 45.1 bits (105), Expect = 2e-05
Identities = 27/89 (30%), Positives = 47/89 (52%)
Frame = +2
Query: 31 PNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQV 90
P VVT++T I CK + + L M + ++I+YGLC+ G+L EA+ +
Sbjct: 53 PTVVTWTTLIAAYCKHRGIDDSFSLYEQMIMSGIMPDVVTCSSILYGLCRHGKLAEAAML 232
Query: 91 LEEMKSIGILPDVYGYYVFVNAKDVGIEV 119
EM ++G+ P+ Y ++ VG++V
Sbjct: 233 PREMHNMGLDPNHVSYTTIIS---VGLQV 310
Score = 28.5 bits (62), Expect = 2.2
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 157 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSL 192
I + ++ + SG P+VVT S+ + GLC+ G L
Sbjct: 107 IDDSFSLYEQMIMSGIMPDVVTCSSILYGLCRHGKL 214
Score = 28.5 bits (62), Expect = 2.2
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSL 49
I + ++ + SG P+VVT S+ + GLC+ G L
Sbjct: 107 IDDSFSLYEQMIMSGIMPDVVTCSSILYGLCRHGKL 214
>AI736610
Length = 411
Score = 42.7 bits (99), Expect = 1e-04
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Frame = +2
Query: 69 HCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVY-------GYY----------VFVN 111
H FN +++G+ LD A + E+MKS GILPDV GY+ +FV
Sbjct: 128 HTFNILLWGMFLSLRLDTAVRFYEDMKSRGILPDVVTYNTLINGYFRFKKVDEAEKLFVE 307
Query: 112 AKDVGIEVDIMSCNFLLKCLVDANRVGD 139
K I +++S +LK V A R+ D
Sbjct: 308 MKGRDIVPNVISFTTMLKGYVAAGRIDD 391
Score = 33.1 bits (74), Expect = 0.090
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = +2
Query: 11 SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHC 70
S + A + ++ G P+VVTY+T I G + + KL M + N
Sbjct: 164 SLRLDTAVRFYEDMKSRGILPDVVTYNTLINGYFRFKKVDEAEKLFVEMKGRDIVPNVIS 343
Query: 71 FNAIMYGLCQRGELDEASQVLE 92
F ++ G G +D+A +V E
Sbjct: 344 FTTMLKGYVAAGRIDDALKVFE 409
>BG882595 weakly similar to GP|3107905|dbj| leaf protein {Ipomoea nil},
partial (14%)
Length = 400
Score = 42.0 bits (97), Expect = 2e-04
Identities = 22/72 (30%), Positives = 34/72 (46%)
Frame = +2
Query: 31 PNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQV 90
P+VVTY+T + + G +LI M N I+ G C+ G + EA +
Sbjct: 8 PDVVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRF 187
Query: 91 LEEMKSIGILPD 102
L MK +G+ P+
Sbjct: 188 LYRMKELGVHPN 223
>TC213874 similar to GB|BAC92425.1|35215067|AP004458 chloroplast RNA
processing protein-like {Oryza sativa (japonica
cultivar-group);} , partial (5%)
Length = 510
Score = 39.7 bits (91), Expect = 0.001
Identities = 21/68 (30%), Positives = 35/68 (50%)
Frame = +3
Query: 13 DISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFN 72
++ A +F ++ +SG TP V +Y+ I GLCK + L M +N N N
Sbjct: 6 EVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITVN 185
Query: 73 AIMYGLCQ 80
+++ GLC+
Sbjct: 186SLIDGLCK 209
Score = 36.2 bits (82), Expect = 0.011
Identities = 22/79 (27%), Positives = 37/79 (45%)
Frame = +1
Query: 32 NVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVL 91
+V+TYS+ I LCK L L M + + + + ++ GLC+ G L A +V
Sbjct: 274 DVITYSSLIDALCKNCHLDQAIALFKKMITQEIHPDMYTYTILIDGLCKGGRLKIAQEVF 453
Query: 92 EEMKSIGILPDVYGYYVFV 110
+ + G D+ Y V +
Sbjct: 454 QHLLIKGYHLDIRTYTVMI 510
Score = 31.6 bits (70), Expect(2) = 4e-04
Identities = 13/42 (30%), Positives = 21/42 (49%)
Frame = +3
Query: 14 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKL 55
+ A +F + PN +T ++ I GLCK+ + VW L
Sbjct: 114 VDEAISLFEEMKHKNVIPNTITVNSLIDGLCKSRRIAYVWDL 239
Score = 31.6 bits (70), Expect = 0.26
Identities = 13/42 (30%), Positives = 21/42 (49%)
Frame = +3
Query: 157 ISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKL 198
+ A +F + PN +T ++ I GLCK+ + VW L
Sbjct: 114 VDEAISLFEEMKHKNVIPNTITVNSLIDGLCKSRRIAYVWDL 239
Score = 28.5 bits (62), Expect(2) = 4e-04
Identities = 11/41 (26%), Positives = 26/41 (62%)
Frame = +1
Query: 71 FNAIMYGLCQRGELDEASQVLEEMKSIGILPDVYGYYVFVN 111
+++++ LC+ LD+A + ++M + I PD+Y Y + ++
Sbjct: 286 YSSLIDALCKNCHLDQAIALFKKMITQEIHPDMYTYTILID 408
Score = 28.1 bits (61), Expect = 2.9
Identities = 14/46 (30%), Positives = 23/46 (49%), Gaps = 1/46 (2%)
Frame = +1
Query: 7 DVRC-SADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRV 51
D C + + A +F + P++ TY+ I GLCK G L++
Sbjct: 301 DALCKNCHLDQAIALFKKMITQEIHPDMYTYTILIDGLCKGGRLKI 438
Score = 27.7 bits (60), Expect = 3.8
Identities = 10/21 (47%), Positives = 15/21 (70%)
Frame = +1
Query: 174 PNVVTYSTYIKGLCKAGSLRV 194
P++ TY+ I GLCK G L++
Sbjct: 376 PDMYTYTILIDGLCKGGRLKI 438
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.322 0.139 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,801,420
Number of Sequences: 63676
Number of extensions: 154193
Number of successful extensions: 2072
Number of sequences better than 10.0: 134
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1699
length of query: 205
length of database: 12,639,632
effective HSP length: 93
effective length of query: 112
effective length of database: 6,717,764
effective search space: 752389568
effective search space used: 752389568
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Medicago: description of AC149209.4