BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149209.11 - phase: 0
(607 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC224837 homologue to UP|Q940S0 (Q940S0) T5E21.14/T5E21.14 (At1g... 741 0.0
TC219736 similar to UP|Q940S0 (Q940S0) T5E21.14/T5E21.14 (At1g14... 378 e-105
TC219105 similar to GB|AAM10098.1|20148415|AY081536 endomembrane... 256 2e-68
TC208411 homologue to UP|Q940S0 (Q940S0) T5E21.14/T5E21.14 (At1g... 256 3e-68
TC215638 homologue to UP|O04091 (O04091) Endomembrane protein EM... 236 3e-62
TC231741 weakly similar to UP|Q94AV9 (Q94AV9) At1g08350/T27G7_4,... 222 3e-58
TC204118 weakly similar to UP|T9S2_HUMAN (Q99805) Transmembrane ... 201 1e-51
TC205997 homologue to UP|Q9LIC2 (Q9LIC2) Multispanning membrane ... 199 4e-51
TC224910 similar to UP|Q940S0 (Q940S0) T5E21.14/T5E21.14 (At1g14... 185 4e-47
TC204121 weakly similar to UP|T9S2_HUMAN (Q99805) Transmembrane ... 183 2e-46
TC224828 UP|Q9AR09 (Q9AR09) Ubiquitin fused to ribosomal protein... 171 1e-42
TC205884 similar to UP|T9S2_HUMAN (Q99805) Transmembrane 9 super... 170 2e-42
TC215639 homologue to UP|O04091 (O04091) Endomembrane protein EM... 163 2e-40
TC219319 homologue to UP|Q9FYQ8 (Q9FYQ8) Endosomal protein-like,... 122 5e-28
TC208999 110 1e-24
TC230941 homologue to UP|Q9FYQ8 (Q9FYQ8) Endosomal protein-like,... 107 2e-23
TC213322 similar to UP|Q940S0 (Q940S0) T5E21.14/T5E21.14 (At1g14... 96 5e-20
AW185547 weakly similar to GP|15010758|gb| At1g08350/T27G7_4 {Ar... 95 1e-19
BE556522 78 1e-14
TC215641 homologue to UP|O04091 (O04091) Endomembrane protein EM... 73 4e-13
>TC224837 homologue to UP|Q940S0 (Q940S0) T5E21.14/T5E21.14
(At1g14670/T5E21.14), partial (72%)
Length = 1549
Score = 741 bits (1912), Expect = 0.0
Identities = 352/427 (82%), Positives = 391/427 (91%)
Frame = +3
Query: 181 NNDRIIDVFVKNDPNAVVDLTEDREVNVDFTYSVKWIETDIPFEKRLEKYSQTSSLSHHL 240
N DR+I++ + DP++VVDLTED++V+V+F Y+ KW ET+ PFEKR++KYSQ+SSL HHL
Sbjct: 3 NKDRVIEISARMDPHSVVDLTEDKDVDVEFVYTAKWKETETPFEKRMDKYSQSSSLPHHL 182
Query: 241 EIHWFSIINSCVTVLLLTGFLAMILMRVLKNDFVKFTPDEEALDDQEETGWKYIHGDVFR 300
EIHWFSIINSCVTVLLLTGFLA ILMRVLKNDF+K+ DEEA DDQEETGWKYIHGDVFR
Sbjct: 183 EIHWFSIINSCVTVLLLTGFLATILMRVLKNDFMKYAQDEEAADDQEETGWKYIHGDVFR 362
Query: 301 YPRFKSLFAAALGTGTQLFTLVIFIFMLALVGVFYPYNRGALFTALVVIYALTSGIASYS 360
P+FKS F+AALG+GTQLFTL IFIFMLALVGVFYPYNRGALFTALVVIYALTSGIA Y+
Sbjct: 363 VPKFKSFFSAALGSGTQLFTLTIFIFMLALVGVFYPYNRGALFTALVVIYALTSGIAGYT 542
Query: 361 AASFYYMIEGKNWVKILVLTGSLFSGPLFFTFSFLNTVAVAYNSTAALPFGTIVVIFLIW 420
A SFY +EG NWV+ L+LTG LF GPLF F FLNTVA+AY++TAALPFGTIVVI LIW
Sbjct: 543 ATSFYIQLEGTNWVRNLLLTGCLFCGPLFLMFCFLNTVAIAYSATAALPFGTIVVIVLIW 722
Query: 421 TLVTSPLLVLGGIAGKNSQSEFQAPCRTNKYPREIPKLPWYRKTLAQMAMAGFLPFSAIF 480
TLVTSPLLVLGGIAGKNS++EFQAP RT KYPREIP LPWYR T+ QMAMAGFLPFSAI+
Sbjct: 723 TLVTSPLLVLGGIAGKNSKTEFQAPVRTTKYPREIPPLPWYRSTIPQMAMAGFLPFSAIY 902
Query: 481 IELYYIFASVWGHQIYTIYSILFIVFIILLIVTAFGNVALTYFQLAAEDHEWWWRSFLCG 540
IELYYIFASVWGH+IYTIYSILFIVFIILLIVTAF VALTYFQLAAEDHEWWWRSFLCG
Sbjct: 903 IELYYIFASVWGHRIYTIYSILFIVFIILLIVTAFITVALTYFQLAAEDHEWWWRSFLCG 1082
Query: 541 GSTGLFIYGYCMFFYHARSDMSGFMQTSFFFGYMACICYGFFLMLGTVSFRASLIFVRHI 600
GSTGLFIYGYC+++Y+ARSDMSGFMQTSFFFGYMACICYGFFLMLG+V FRASL+FVRHI
Sbjct: 1083GSTGLFIYGYCLYYYYARSDMSGFMQTSFFFGYMACICYGFFLMLGSVGFRASLLFVRHI 1262
Query: 601 YRSLKCE 607
YRS+KCE
Sbjct: 1263YRSIKCE 1283
>TC219736 similar to UP|Q940S0 (Q940S0) T5E21.14/T5E21.14
(At1g14670/T5E21.14), partial (41%)
Length = 904
Score = 378 bits (971), Expect = e-105
Identities = 171/251 (68%), Positives = 216/251 (85%)
Frame = +3
Query: 54 YANKVGPFHNPSETYRYFDLPFCSPENVEEKKEDLGEVLNGDRLVVAPYKLEFLIDKKPE 113
YANKVGPFHNPSETYRYFDLPFC P +++EKKE LGEVLNGDRLV APYKLEF DK+
Sbjct: 156 YANKVGPFHNPSETYRYFDLPFCEPGDLKEKKEALGEVLNGDRLVSAPYKLEFQRDKELV 335
Query: 114 SICQKMLTRKEVAQFRHAVLKDYFYQMYYDDLPIWGFLGRFETDEKDVDTNEATVYLFRN 173
S+C + L++++VA+FR AV KDY++QMYYDDLPIWGF+G+ + + KD ++ +L+++
Sbjct: 336 SVCDRKLSKQDVARFRSAVRKDYYFQMYYDDLPIWGFIGKVDKEGKD--PSDYRYFLYKH 509
Query: 174 VHFEILYNNDRIIDVFVKNDPNAVVDLTEDREVNVDFTYSVKWIETDIPFEKRLEKYSQT 233
+HF++ YN DR+I++ V+ DPNA+VDLT+D EV+ +F Y+VKW ET+ PFEKR+++YSQ+
Sbjct: 510 IHFDVFYNKDRVIEINVRTDPNALVDLTKDSEVDAEFLYTVKWKETNTPFEKRMDRYSQS 689
Query: 234 SSLSHHLEIHWFSIINSCVTVLLLTGFLAMILMRVLKNDFVKFTPDEEALDDQEETGWKY 293
SSL HHLEIHWFSIINSCVTVLLLTGFLA ILMRVLKNDFVK+ DEE+ +DQEETGWKY
Sbjct: 690 SSLPHHLEIHWFSIINSCVTVLLLTGFLATILMRVLKNDFVKYAHDEESAEDQEETGWKY 869
Query: 294 IHGDVFRYPRF 304
IHGDVFR+P+F
Sbjct: 870 IHGDVFRFPKF 902
>TC219105 similar to GB|AAM10098.1|20148415|AY081536 endomembrane protein
EMP70 precusor isolog {Arabidopsis thaliana;} , partial
(59%)
Length = 1358
Score = 256 bits (654), Expect = 2e-68
Identities = 142/364 (39%), Positives = 211/364 (57%), Gaps = 10/364 (2%)
Frame = +3
Query: 41 SDHRYKEGDFVPFYANKVGPFHNPSETYRYFDLPFCSPEN---VEEKKEDLGEVLNGDRL 97
SDH+Y+ + V + NKVGP++NP ETY Y+ LPFC P + K LGEVL G+ L
Sbjct: 198 SDHKYQHDEPVNLWVNKVGPYNNPQETYNYYSLPFCHPSSSASAAHKWGGLGEVLGGNEL 377
Query: 98 VVAPYKLEFLIDKKPESICQKMLTRKEVAQFRHAVLKDYFYQMYYDDLPIWGFLGRFETD 157
+ + +++F + CQ L +V QF+ A+ +Y+++ + DDLP+WG++G D
Sbjct: 378 IDSQIEIKFQRNVDKTVFCQIDLDEAKVKQFKDAIENNYWFEFFMDDLPLWGYVGELHPD 557
Query: 158 EKDVDTNEATVYLFRNVHFEILYNNDRIIDVFVKNDPNAVVDLTEDREV--NVDFTYSVK 215
K+ D + +Y +N+ + YNND+II V N D+ + EV ++D TYSVK
Sbjct: 558 -KNSDNGKHVIYTHKNII--VKYNNDQIIHV------NLTQDIPKPLEVGKHLDMTYSVK 710
Query: 216 WIETDIPFEKRLEKYSQTSSLSHHLEIHWFSIINSCVTVLLLTGFLAMILMRVLKNDFVK 275
W T++ F +R + Y H +IHWFSI NS + V+ LTG ++MILMR L+ND+ K
Sbjct: 711 WDSTNVTFGRRFDVYLDHPFFEH--QIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAK 884
Query: 276 FTPDEEAL-----DDQEETGWKYIHGDVFRYPRFKSLFAAALGTGTQLFTLVIFIFMLAL 330
+ +++ L D EE+GWK +HGDVFR PR + +A +GTG QL LV+ + +LA+
Sbjct: 885 YAREDDDLESLERDVSEESGWKLVHGDVFRPPRNLVILSAVVGTGAQLALLVLLVVLLAI 1064
Query: 331 VGVFYPYNRGALFTALVVIYALTSGIASYSAASFYYMIEGKNWVKILVLTGSLFSGPLFF 390
VG+ Y RGA+ T +V YALTS I+ Y + Y GK + V + + G
Sbjct: 1065VGMLY-VGRGAIVTTFIVCYALTSFISGYVSGGMYSRNGGKYLL*FSVYSLQVCLGGFVS 1241
Query: 391 TFSF 394
FSF
Sbjct: 1242VFSF 1253
>TC208411 homologue to UP|Q940S0 (Q940S0) T5E21.14/T5E21.14
(At1g14670/T5E21.14), partial (22%)
Length = 649
Score = 256 bits (653), Expect = 3e-68
Identities = 118/132 (89%), Positives = 126/132 (95%)
Frame = +1
Query: 476 FSAIFIELYYIFASVWGHQIYTIYSILFIVFIILLIVTAFGNVALTYFQLAAEDHEWWWR 535
FSAI I+LYYIFASVWGH+IYTIYSILFIVFIILLIVTAF VALTYFQLAAEDHEWWWR
Sbjct: 4 FSAISIDLYYIFASVWGHRIYTIYSILFIVFIILLIVTAFITVALTYFQLAAEDHEWWWR 183
Query: 536 SFLCGGSTGLFIYGYCMFFYHARSDMSGFMQTSFFFGYMACICYGFFLMLGTVSFRASLI 595
SFLCGGSTGLFIY YC+++Y+ARSDMSGFMQTSFFFGYMACICYGFFLMLGTV FRA+L
Sbjct: 184 SFLCGGSTGLFIYAYCLYYYYARSDMSGFMQTSFFFGYMACICYGFFLMLGTVGFRAALF 363
Query: 596 FVRHIYRSLKCE 607
FVRHIYRS+KCE
Sbjct: 364 FVRHIYRSIKCE 399
>TC215638 homologue to UP|O04091 (O04091) Endomembrane protein EMP70 precusor
isolog; 68664-64364, partial (42%)
Length = 1203
Score = 236 bits (601), Expect = 3e-62
Identities = 104/238 (43%), Positives = 150/238 (62%)
Frame = +1
Query: 370 GKNWVKILVLTGSLFSGPLFFTFSFLNTVAVAYNSTAALPFGTIVVIFLIWTLVTSPLLV 429
GKNW+K ++LT SLF F LNT+A+ Y S AA+PFGT+VV+F+IW ++ PL +
Sbjct: 31 GKNWIKSMILTASLFPFMCFGIGFILNTIAIFYGSLAAIPFGTMVVVFVIWAFISFPLAL 210
Query: 430 LGGIAGKNSQSEFQAPCRTNKYPREIPKLPWYRKTLAQMAMAGFLPFSAIFIELYYIFAS 489
LG + G+N PCR PR IP+ WY M G LPF +IFIE+Y++F S
Sbjct: 211 LGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVVSLMGGLLPFGSIFIEMYFVFTS 390
Query: 490 VWGHQIYTIYSILFIVFIILLIVTAFGNVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYG 549
W +++Y +Y + +VF+IL IVT + TYF L AE++ W W SF ST +++Y
Sbjct: 391 FWNYKVYYVYGFMLLVFLILTIVTVCVTIVGTYFLLNAENYHWQWTSFFSAASTAVYVYL 570
Query: 550 YCMFFYHARSDMSGFMQTSFFFGYMACICYGFFLMLGTVSFRASLIFVRHIYRSLKCE 607
Y +++Y+ ++ MSGF QTSF+FGY C G ++ G V + S +FVR IYR++KC+
Sbjct: 571 YSVYYYYVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 744
>TC231741 weakly similar to UP|Q94AV9 (Q94AV9) At1g08350/T27G7_4, partial
(32%)
Length = 1101
Score = 222 bits (566), Expect = 3e-58
Identities = 98/180 (54%), Positives = 135/180 (74%)
Frame = +3
Query: 428 LVLGGIAGKNSQSEFQAPCRTNKYPREIPKLPWYRKTLAQMAMAGFLPFSAIFIELYYIF 487
L GG+ G +S FQ+ T ++PR+I +L WYR+T M + G +PFSAI ++L+ +
Sbjct: 3 LAFGGVIGYRFRSXFQSXXATKRHPRDIQQLAWYRRTPFLMFIGGLVPFSAIVLQLHQAY 182
Query: 488 ASVWGHQIYTIYSILFIVFIILLIVTAFGNVALTYFQLAAEDHEWWWRSFLCGGSTGLFI 547
AS+WG++IYT+ SILF FI ++++ A ++ LTY QL+AEDHEWWWRS LCGGST +F+
Sbjct: 183 ASMWGYKIYTLPSILFATFIPVILIIALVSIGLTYIQLSAEDHEWWWRSVLCGGSTAIFM 362
Query: 548 YGYCMFFYHARSDMSGFMQTSFFFGYMACICYGFFLMLGTVSFRASLIFVRHIYRSLKCE 607
+GYC++FY RS+MSGF+Q SFF GY AC+CY FFL+ G +SFR SL+FVRHIY +K E
Sbjct: 363 FGYCVYFY-VRSNMSGFLQLSFFIGYNACLCYAFFLIFGAISFRVSLLFVRHIYHDVKRE 539
>TC204118 weakly similar to UP|T9S2_HUMAN (Q99805) Transmembrane 9
superfamily protein member 2 precursor (p76), partial
(25%)
Length = 966
Score = 201 bits (510), Expect = 1e-51
Identities = 91/243 (37%), Positives = 144/243 (58%)
Frame = +3
Query: 365 YYMIEGKNWVKILVLTGSLFSGPLFFTFSFLNTVAVAYNSTAALPFGTIVVIFLIWTLVT 424
Y M +G W K+ + T ++F + F LN + S+ A+PFGT+ + +W ++
Sbjct: 12 YKMFKGSEWKKVALRTATMFPAVVSTIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGIS 191
Query: 425 SPLLVLGGIAGKNSQSEFQAPCRTNKYPREIPKLPWYRKTLAQMAMAGFLPFSAIFIELY 484
PL+ +G G + + P +TNK PR+IP+ WY + + + G LPF A+FIEL+
Sbjct: 192 VPLVFVGSYVGFKKPA-IENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELF 368
Query: 485 YIFASVWGHQIYTIYSILFIVFIILLIVTAFGNVALTYFQLAAEDHEWWWRSFLCGGSTG 544
+I S+W +Q Y I+ LF+VFIIL++ A V L YFQL +ED+ WWWRS+L GS+
Sbjct: 369 FILTSIWLNQFYYIFGFLFLVFIILIVTCAEITVVLCYFQLCSEDYLWWWRSYLTSGSSA 548
Query: 545 LFIYGYCMFFYHARSDMSGFMQTSFFFGYMACICYGFFLMLGTVSFRASLIFVRHIYRSL 604
L+++ Y F++ + +++ + F+FGYM Y FF++ GT+ F A F R IY S+
Sbjct: 549 LYLFLYATFYFFTKLEITKLVSAIFYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSV 728
Query: 605 KCE 607
K +
Sbjct: 729 KID 737
>TC205997 homologue to UP|Q9LIC2 (Q9LIC2) Multispanning membrane
protein-like, partial (36%)
Length = 1407
Score = 199 bits (505), Expect = 4e-51
Identities = 91/228 (39%), Positives = 140/228 (60%)
Frame = +3
Query: 380 TGSLFSGPLFFTFSFLNTVAVAYNSTAALPFGTIVVIFLIWTLVTSPLLVLGGIAGKNSQ 439
T +F G LF F LN + S+ A+PFGT+ + +W ++ PL+ +G G
Sbjct: 12 TAFMFPGILFAVFFVLNALIWGEQSSGAVPFGTMFALVCLWFGISVPLVFVGSYLGFKKP 191
Query: 440 SEFQAPCRTNKYPREIPKLPWYRKTLAQMAMAGFLPFSAIFIELYYIFASVWGHQIYTIY 499
+ + P +TNK PR++P+ WY K + + + G LPF A+FIEL++I S+W +Q Y I+
Sbjct: 192 A-IEDPVKTNKIPRQVPEQAWYMKPVFSILIGGILPFGAVFIELFFILTSIWLNQFYYIF 368
Query: 500 SILFIVFIILLIVTAFGNVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCMFFYHARS 559
LFIVF+ILLI A + L YFQL +ED+ WWWRS+L GS+ L+++ Y +F++ +
Sbjct: 369 GFLFIVFVILLITCAEITIVLCYFQLCSEDYNWWWRSYLTAGSSALYLFLYSIFYFFTKL 548
Query: 560 DMSGFMQTSFFFGYMACICYGFFLMLGTVSFRASLIFVRHIYRSLKCE 607
++S + +FGYM + Y FF++ GT+ F A FVR IY S+K +
Sbjct: 549 EISKLVSGILYFGYMIIVSYAFFVLTGTIGFYACFWFVRKIYSSVKID 692
>TC224910 similar to UP|Q940S0 (Q940S0) T5E21.14/T5E21.14
(At1g14670/T5E21.14), partial (22%)
Length = 726
Score = 185 bits (470), Expect = 4e-47
Identities = 92/158 (58%), Positives = 118/158 (74%)
Frame = +2
Query: 13 MEKSMTCLVSAIVILCCFCCINYVTSDASDHRYKEGDFVPFYANKVGPFHNPSETYRYFD 72
M +S L+ AI+I +V SDASDHRYK+GD VP YANKVGPFHNPSETYRYFD
Sbjct: 23 MGRSTLALILAILI--SLQGTPHVRSDASDHRYKDGDSVPLYANKVGPFHNPSETYRYFD 196
Query: 73 LPFCSPENVEEKKEDLGEVLNGDRLVVAPYKLEFLIDKKPESICQKMLTRKEVAQFRHAV 132
LPFC + ++K E LGEVLNGDRLV APY+L F +K + +C++ LT+++VAQFR AV
Sbjct: 197 LPFCVTGHEKDKTEALGEVLNGDRLVSAPYELSFKKEKDSKVVCKRKLTKEQVAQFREAV 376
Query: 133 LKDYFYQMYYDDLPIWGFLGRFETDEKDVDTNEATVYL 170
KDY++QMYYDDLPIWGF+G T +K+ T+ + V++
Sbjct: 377 KKDYYFQMYYDDLPIWGFIG---TVDKEGKTDPSKVHI 481
>TC204121 weakly similar to UP|T9S2_HUMAN (Q99805) Transmembrane 9
superfamily protein member 2 precursor (p76), partial
(32%)
Length = 1035
Score = 183 bits (464), Expect = 2e-46
Identities = 83/228 (36%), Positives = 134/228 (58%)
Frame = +2
Query: 380 TGSLFSGPLFFTFSFLNTVAVAYNSTAALPFGTIVVIFLIWTLVTSPLLVLGGIAGKNSQ 439
T +F + F LN + S+ A+PFGT+ + +W ++ PL+ +G G
Sbjct: 14 TAIMFPAIVSAIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGAYVGFKKP 193
Query: 440 SEFQAPCRTNKYPREIPKLPWYRKTLAQMAMAGFLPFSAIFIELYYIFASVWGHQIYTIY 499
+ + P +TNK PR+IP+ WY + + + G LPF A+FIEL++I S+W +Q Y I+
Sbjct: 194 A-IENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIF 370
Query: 500 SILFIVFIILLIVTAFGNVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCMFFYHARS 559
LF+VF+IL++ A + L YFQL +ED+ WWWRS+L GS+ L+++ Y F++ +
Sbjct: 371 GFLFLVFVILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKL 550
Query: 560 DMSGFMQTSFFFGYMACICYGFFLMLGTVSFRASLIFVRHIYRSLKCE 607
+++ + +FGYM Y FF++ GT+ F A F R IY S+K +
Sbjct: 551 EITKLVSGLLYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID 694
>TC224828 UP|Q9AR09 (Q9AR09) Ubiquitin fused to ribosomal protein L40,
complete
Length = 1196
Score = 171 bits (432), Expect = 1e-42
Identities = 72/82 (87%), Positives = 81/82 (97%)
Frame = -1
Query: 526 AAEDHEWWWRSFLCGGSTGLFIYGYCMFFYHARSDMSGFMQTSFFFGYMACICYGFFLML 585
+AEDHEWWWRSFLCGGSTGLFIYGYC+++Y+ARSDMSGFMQTSFFFGYMACICYGFFLML
Sbjct: 512 SAEDHEWWWRSFLCGGSTGLFIYGYCLYYYYARSDMSGFMQTSFFFGYMACICYGFFLML 333
Query: 586 GTVSFRASLIFVRHIYRSLKCE 607
G+V FRASL+FVRHIYRS+KC+
Sbjct: 332 GSVGFRASLLFVRHIYRSIKCK 267
>TC205884 similar to UP|T9S2_HUMAN (Q99805) Transmembrane 9 superfamily
protein member 2 precursor (p76), partial (6%)
Length = 1205
Score = 170 bits (430), Expect = 2e-42
Identities = 90/278 (32%), Positives = 148/278 (52%), Gaps = 6/278 (2%)
Frame = +1
Query: 336 PYNRGALFTALVVIYALTSGIASYSAASFYYMIEG--KNWVKILVLTGSLFSGPLFFTFS 393
P +RG L T ++++Y + A Y + + I+G + W I L + G F +
Sbjct: 10 PASRGMLLTGMIILYLILGIAAGYVSVRVWRTIKGTTEGWRSISWLAACFYPGIAFIILT 189
Query: 394 FLNTVAVAYNSTAALPFGTIVVIFLIWTLVTSPLLVLGGIAGKNSQSEFQAPCRTNKYPR 453
LN + + NST A+P +F +W ++ PL ++GG G +Q + P RTN+ PR
Sbjct: 190 VLNFILWSSNSTGAIPISLYFELFFLWFCISVPLTLIGGFMGTKAQP-IEYPVRTNQIPR 366
Query: 454 EIP--KLPWYRKTLAQMAMAGFLPFSAIFIELYYIFASVWGHQIYTIYSILFIVFIILLI 511
EIP K P + L AG LPF +FIEL++I +S+W + Y ++ L +V ++L++
Sbjct: 367 EIPARKYPSWLLVLG----AGTLPFGTLFIELFFILSSIWLGRFYYVFGFLLVVLLLLIV 534
Query: 512 VTAFGNVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCMFF--YHARSDMSGFMQTSF 569
V A +V LTY L ED WWW++F GS L+++ Y + + + RS +SG + +
Sbjct: 535 VCAEVSVVLTYMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLRS-LSGPVSATL 711
Query: 570 FFGYMACICYGFFLMLGTVSFRASLIFVRHIYRSLKCE 607
+ GY + L GT+ F S FV +++ S+K +
Sbjct: 712 YLGYSLLMAIAIMLSTGTIGFLMSFYFVHYLFSSVKID 825
>TC215639 homologue to UP|O04091 (O04091) Endomembrane protein EMP70 precusor
isolog; 68664-64364, partial (30%)
Length = 939
Score = 163 bits (412), Expect = 2e-40
Identities = 70/175 (40%), Positives = 105/175 (60%)
Frame = +1
Query: 433 IAGKNSQSEFQAPCRTNKYPREIPKLPWYRKTLAQMAMAGFLPFSAIFIELYYIFASVWG 492
+ G+N PCR R IP+ WY M G LPF +IFIE+Y++F S W
Sbjct: 4 VVGRNWSGXXNNPCRVKTIXRPIPEKKWYLTPSVVXLMGGLLPFGSIFIEMYFVFTSFWN 183
Query: 493 HQIYTIYSILFIVFIILLIVTAFGNVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCM 552
+++Y +Y + +VF+IL+IVT + TYF L AE++ W W SF ST +++Y Y +
Sbjct: 184 YKVYYVYGFMLLVFLILIIVTICVTIVGTYFLLNAENYHWQWTSFFSAASTAVYVYLYSI 363
Query: 553 FFYHARSDMSGFMQTSFFFGYMACICYGFFLMLGTVSFRASLIFVRHIYRSLKCE 607
++++ ++ MSGF QTSF+FGY G ++ G V F S +FVR IYR++KC+
Sbjct: 364 YYFYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRRIYRNIKCD 528
>TC219319 homologue to UP|Q9FYQ8 (Q9FYQ8) Endosomal protein-like, partial
(26%)
Length = 854
Score = 122 bits (306), Expect = 5e-28
Identities = 60/166 (36%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Frame = +2
Query: 445 PCRTNKYPREIP--KLPWYRKTLAQMAMAGFLPFSAIFIELYYIFASVWGHQIYTIYSIL 502
P RTN+ PREIP K P + L AG LPF +FIEL++I +S+W ++Y ++ L
Sbjct: 29 PVRTNQIPREIPQQKYPSWLLVLG----AGTLPFGTLFIELFFIMSSIWMGRVYYVFGFL 196
Query: 503 FIVFIILLIVTAFGNVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCM-FFYHARSDM 561
F+V I+L++V A ++ LTY L ED +WWW+SF GS ++I+ Y + + +
Sbjct: 197 FVVLILLVVVCAEVSLVLTYMHLCVEDWKWWWKSFFASGSVAIYIFLYSVNYLVFDLKSL 376
Query: 562 SGFMQTSFFFGYMACICYGFFLMLGTVSFRASLIFVRHIYRSLKCE 607
SG + + + GY + L GT+ F +S FV +++ S+K +
Sbjct: 377 SGPVSATLYLGYSLFMVLAIMLSTGTIGFLSSFWFVHYLFSSVKLD 514
>TC208999
Length = 1019
Score = 110 bits (276), Expect = 1e-24
Identities = 57/159 (35%), Positives = 87/159 (53%), Gaps = 3/159 (1%)
Frame = +2
Query: 452 PREIP--KLPWYRKTLAQMAMAGFLPFSAIFIELYYIFASVWGHQIYTIYSILFIVFIIL 509
PREIP K P + L AG LPF +FIEL++I +S+W + Y ++ L +V ++L
Sbjct: 8 PREIPARKYPSWLLVLG----AGTLPFGTLFIELFFILSSIWLGRFYYVFGFLLVVLLLL 175
Query: 510 LIVTAFGNVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCM-FFYHARSDMSGFMQTS 568
+IV A +V LTY L ED +WWW+SF GS L+++ Y + + +SG +
Sbjct: 176 VIVCAEVSVFLTYMHLCVEDWQWWWKSFFASGSVALYVFLYSINYLVFDLQSLSGPVSAI 355
Query: 569 FFFGYMACICYGFFLMLGTVSFRASLIFVRHIYRSLKCE 607
+ GY + L GTV F S FV +++ S+K +
Sbjct: 356 LYLGYSLLMAIAIMLSTGTVGFLMSFYFVHYLFSSVKID 472
>TC230941 homologue to UP|Q9FYQ8 (Q9FYQ8) Endosomal protein-like, partial
(22%)
Length = 673
Score = 107 bits (267), Expect = 2e-23
Identities = 48/138 (34%), Positives = 81/138 (57%), Gaps = 1/138 (0%)
Frame = +1
Query: 471 AGFLPFSAIFIELYYIFASVWGHQIYTIYSILFIVFIILLIVTAFGNVALTYFQLAAEDH 530
AG LPF +FIEL++I +S+W ++Y ++ L +V I+L++V A ++ LTY L ED
Sbjct: 25 AGTLPFGTLFIELFFIMSSIWMGRVYYVFGFLLVVMILLVVVCAEVSLVLTYMHLCVEDW 204
Query: 531 EWWWRSFLCGGSTGLFIYGYCM-FFYHARSDMSGFMQTSFFFGYMACICYGFFLMLGTVS 589
WWW+SF GS ++I+ Y + + ++SG + + + GY + L GTV
Sbjct: 205 RWWWKSFFASGSVAIYIFLYSINYLVFDLKNLSGPVSATLYLGYSLFMVLAIMLATGTVG 384
Query: 590 FRASLIFVRHIYRSLKCE 607
F +S FV +++ S+K +
Sbjct: 385 FLSSFWFVYYLFSSVKLD 438
>TC213322 similar to UP|Q940S0 (Q940S0) T5E21.14/T5E21.14
(At1g14670/T5E21.14), partial (6%)
Length = 395
Score = 95.9 bits (237), Expect = 5e-20
Identities = 47/70 (67%), Positives = 55/70 (78%)
Frame = +1
Query: 4 FVSVCGSVYMEKSMTCLVSAIVILCCFCCINYVTSDASDHRYKEGDFVPFYANKVGPFHN 63
F+S+C V MEKSM CLV AIVIL +CCI++VTSDASDHRY +GD VPFYANKVGPFHN
Sbjct: 124 FLSIC--VCMEKSMACLVGAIVIL--WCCISHVTSDASDHRYMKGDSVPFYANKVGPFHN 291
Query: 64 PSETYRYFDL 73
P ++ L
Sbjct: 292 PRSDFKSMSL 321
>AW185547 weakly similar to GP|15010758|gb| At1g08350/T27G7_4 {Arabidopsis
thaliana}, partial (14%)
Length = 451
Score = 94.7 bits (234), Expect = 1e-19
Identities = 47/99 (47%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Frame = +2
Query: 282 ALDDQEETGWKYI-HGDVFRYPRFKSLFAAALGTGTQLFTLVIFIFMLALVGVFYPYNRG 340
A ++ E GWK + HGDVFR P SL A +GTGTQL L+ + LAL+G YPYNRG
Sbjct: 23 ANEEDNEVGWKSLQHGDVFRPPPNSSLLFAVVGTGTQLLILLCVLLFLALIGTLYPYNRG 202
Query: 341 ALFTALVVIYALTSGIASYSAASFYYMIEGKNWVKILVL 379
L LV++YAL+S A Y+AASF+ + WV + ++
Sbjct: 203 GLLNWLVLLYALSSVFAGYTAASFHGLFAENGWVILYII 319
>BE556522
Length = 193
Score = 78.2 bits (191), Expect = 1e-14
Identities = 38/62 (61%), Positives = 46/62 (73%), Gaps = 1/62 (1%)
Frame = +2
Query: 431 GGIAGKNSQSEFQAPCRTNKYPREIPKLPWYRKTLAQMAMAGFLPFSAIFI-ELYYIFAS 489
GG+ KN +E QAP T KYPREIP LPWYR T+++MAMAGFLPF+AI+I L YI
Sbjct: 2 GGVVVKNI*AECQAPVPTTKYPREIPPLPWYRGTISKMAMAGFLPFTAIYIATLLYICQC 181
Query: 490 VW 491
+W
Sbjct: 182 LW 187
>TC215641 homologue to UP|O04091 (O04091) Endomembrane protein EMP70 precusor
isolog; 68664-64364, partial (11%)
Length = 658
Score = 72.8 bits (177), Expect = 4e-13
Identities = 28/63 (44%), Positives = 45/63 (70%)
Frame = +3
Query: 545 LFIYGYCMFFYHARSDMSGFMQTSFFFGYMACICYGFFLMLGTVSFRASLIFVRHIYRSL 604
+++Y Y +++Y+ ++ MSGF QTSF+FGY C G ++ GTV + S +FVR IYR++
Sbjct: 6 VYVYLYSVYYYYVKTKMSGFFQTSFYFGYTLMFCLGLGILCGTVGYLGSNLFVRRIYRNI 185
Query: 605 KCE 607
KC+
Sbjct: 186 KCD 194
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.329 0.143 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,352,559
Number of Sequences: 63676
Number of extensions: 467796
Number of successful extensions: 4821
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 4681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4790
length of query: 607
length of database: 12,639,632
effective HSP length: 103
effective length of query: 504
effective length of database: 6,081,004
effective search space: 3064826016
effective search space used: 3064826016
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)
Medicago: description of AC149209.11