BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149206.7 + phase: 0
(310 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC228567 44 1e-04
BU927027 weakly similar to GP|9294370|dbj transcription factor X... 40 0.001
TC226629 homologue to UP|Q93XA3 (Q93XA3) Homeodomain leucine zip... 39 0.002
TC206105 weakly similar to UP|Q7RH28 (Q7RH28) Mature-parasite-in... 39 0.004
BU082790 38 0.005
CF923172 38 0.005
TC214018 weakly similar to UP|Q9FXI1 (Q9FXI1) F6F9.12 protein, p... 38 0.007
CA853080 weakly similar to GP|9759160|dbj| contains similarity t... 37 0.009
TC225389 homologue to UP|Q84T14 (Q84T14) Vacuolar ATPase subunit... 37 0.009
TC225390 homologue to UP|Q84T14 (Q84T14) Vacuolar ATPase subunit... 37 0.015
TC226973 similar to UP|Q6QU76 (Q6QU76) SMC3, partial (36%) 36 0.019
TC219020 similar to UP|SRB7_SCHPO (O94376) RNA polymerase II med... 36 0.019
TC216950 36 0.025
TC225391 homologue to UP|Q84T14 (Q84T14) Vacuolar ATPase subunit... 36 0.025
TC225392 homologue to UP|Q84T14 (Q84T14) Vacuolar ATPase subunit... 36 0.025
TC233242 similar to UP|Q9FHK5 (Q9FHK5) Gb|AAF19561.1, partial (11%) 36 0.025
TC206107 weakly similar to UP|Q7RH28 (Q7RH28) Mature-parasite-in... 35 0.033
TC207027 weakly similar to UP|Q9LW95 (Q9LW95) KED, partial (17%) 35 0.057
TC210484 34 0.074
TC220163 similar to UP|Q75M49 (Q75M49) Unknow protein, partial (7%) 32 0.48
>TC228567
Length = 1531
Score = 43.5 bits (101), Expect = 1e-04
Identities = 40/184 (21%), Positives = 79/184 (42%), Gaps = 18/184 (9%)
Frame = +2
Query: 23 ERRLRSIKRDIEKCCEELENMETQVKEFETEKNILDGQVNEFESKKGELEGLLRDFESEK 82
++ ++K ++E+ EEL+ + QV K+ L+ + K EL + +E+
Sbjct: 176 DQESNNLKLELEQV*EELQRLNEQVLSTRVLKSKLESASSLLHGLKAELTAYMESKVNEE 355
Query: 83 TNFERRQKEFESK---EK------EFEIRVMEFQSKEEEFKVQVKVLFEAKEEKFEVKMQ 133
E++++ E K EK + + +SK EE K V + EEK +
Sbjct: 356 FYKEQKEEVEELKLNIEKATSDVNRLRVASVSLKSKLEEEK-SVLASLKQSEEKASAAVV 532
Query: 134 QFENQVEDNLKSVKALELKENQIEVQIKDLKSKLNNFG---------GQPKELELTEKQH 184
+ ++E + ++ +++KEN+ + +L KL Q + EL E Q
Sbjct: 533 NLQAELEKSRSAIAFIQMKENEAREMMTELPKKLQKASQEADEAKSLAQAAQAELIEAQE 712
Query: 185 DEEK 188
+ E+
Sbjct: 713 EVEQ 724
>BU927027 weakly similar to GP|9294370|dbj transcription factor X1-like
protein {Arabidopsis thaliana}, partial (18%)
Length = 443
Score = 40.0 bits (92), Expect = 0.001
Identities = 33/148 (22%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Frame = +1
Query: 22 EERRLRSIKRDIEKC-CEELENMETQVKEFETEKNILDGQVNEFESKKGELEGLLRDFES 80
+++ +++ +I+K ++++ + E K L Q NE E +K ELE ES
Sbjct: 16 KDKLIQAYNAEIKKIQSSATDHLKKIFTDHEKLKLQLKSQKNELELRKVELEKREAHNES 195
Query: 81 EKTNFERRQKEFESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAKEEKFEVKMQQFENQVE 140
E+ + E K ++ +E Q K +E +++ + ++E+ K+ Q + Q++
Sbjct: 196 ERKKLTKEIMENAMKNSSLQMATLE-QKKADENVMKLAEDQKRQKEQLHAKIIQLQKQLD 372
Query: 141 DNLKSVKALELKENQIEVQIKDLKSKLN 168
K+ ++E++I+ LK LN
Sbjct: 373 -----------KKQELELEIQQLKGSLN 423
>TC226629 homologue to UP|Q93XA3 (Q93XA3) Homeodomain leucine zipper protein
HDZ3 (Fragment), partial (96%)
Length = 975
Score = 39.3 bits (90), Expect = 0.002
Identities = 47/186 (25%), Positives = 86/186 (45%), Gaps = 16/186 (8%)
Frame = +3
Query: 33 IEKCCEELENMETQVKEFETEK-NILDGQVNE-FESKKG--ELEGLLRDFESEKTNFERR 88
+EK EE +E + K +K + QV F++++ + + L RD++ K++++
Sbjct: 123 LEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKSSYDTL 302
Query: 89 QKEFESKEKEFEIRVMEFQSKEEEFKVQVK-----VLFEAKEEKFEVKMQQ---FENQVE 140
++S KE E E S E+ +VQ K L + K + V F +VE
Sbjct: 303 LSSYDSIMKENEKLKSEVVSLNEKLQVQAKEVPEETLCDKKVDPLPVDEDMAPIFSTRVE 482
Query: 141 DNLKS--VKALELKENQIEVQIKDLKSKL--NNFGGQPKELELTEKQHDEEKEFDTSYMD 196
D+L S V + + E +V + + S +N+GG +E + + ++ + SY+D
Sbjct: 483 DHLSSGSVGSAVVDEGSPQVVVDSVDSYFPADNYGGCMGPVERVQSEQEDGSDDGRSYLD 662
Query: 197 DDGASE 202
ASE
Sbjct: 663 VFVASE 680
>TC206105 weakly similar to UP|Q7RH28 (Q7RH28) Mature-parasite-infected
erythrocyte surface antigen, partial (5%)
Length = 858
Score = 38.5 bits (88), Expect = 0.004
Identities = 40/182 (21%), Positives = 85/182 (45%)
Frame = +1
Query: 32 DIEKCCEELENMETQVKEFETEKNILDGQVNEFESKKGELEGLLRDFESEKTNFERRQKE 91
+ EK +E+ +Q F+ E N++ E++K L+ L + + N E +
Sbjct: 193 EAEKAQSGVEDKISQSVSFKEETNVVGDLP---EAQKKALDELKKLVQEALNNHELTAPK 363
Query: 92 FESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAKEEKFEVKMQQFENQVEDNLKSVKALEL 151
E ++K+ + KEE + K E EEK EV++ + + ++E + K E+
Sbjct: 364 PEPEKKK-----PAAEKKEEVEVTEGKKEAEVIEEKKEVEVTEEKKEIEVT-EEKKEAEV 525
Query: 152 KENQIEVQIKDLKSKLNNFGGQPKELELTEKQHDEEKEFDTSYMDDDGASEEIDILDNLR 211
E + EV++ + K KE+E+TE++ + E + + + +E+++ + +
Sbjct: 526 IEEKKEVEVTEEK----------KEIEVTEEKKEAEVKEEKKEGEVTEEKKEVEVTEEKK 675
Query: 212 ES 213
E+
Sbjct: 676 EA 681
>BU082790
Length = 431
Score = 38.1 bits (87), Expect = 0.005
Identities = 30/138 (21%), Positives = 60/138 (42%), Gaps = 24/138 (17%)
Frame = +3
Query: 65 ESKKGELEGLLRDFESEKTNFERRQKEFESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAK 124
E K LEG+++ S++T E F KEKE + ++ E + K EEF + + +
Sbjct: 3 EEKIKTLEGMIK---SKETALEMSTSSFLEKEKELQSKIEELEDKVEEFNQSIALQKVVE 173
Query: 125 EE-------------KFEVKMQQFENQVE-----------DNLKSVKALELKENQIEVQI 160
+ K +V + + E ++ D L + L+ + N +E ++
Sbjct: 174 DTNTITSNGVAVSLFKSDVHLSEKEAEISTIDSNGGGNLCDTLAELSLLKERNNSMETEL 353
Query: 161 KDLKSKLNNFGGQPKELE 178
K+L+ + + + E+E
Sbjct: 354 KELQQRYSEMSLRFAEVE 407
>CF923172
Length = 371
Score = 38.1 bits (87), Expect = 0.005
Identities = 30/95 (31%), Positives = 46/95 (47%), Gaps = 4/95 (4%)
Frame = -1
Query: 19 QQVEERRLRSIKRDIE--KCCEELENMETQVKEFETEKNILDGQVNE--FESKKGELEGL 74
Q++ E +LR K + E K E+E ETQ E + VNE FE K EL +
Sbjct: 368 QELXEIKLREEKLNCELLKGTNEIEQWETQASTLFAE--LQXSAVNETLFEGKVCELNEM 195
Query: 75 LRDFESEKTNFERRQKEFESKEKEFEIRVMEFQSK 109
R +EKT +R ++ ++K E + + E S+
Sbjct: 194 FRVLHTEKTELQRMVEDLKTKYDEARVMLEEKASR 90
>TC214018 weakly similar to UP|Q9FXI1 (Q9FXI1) F6F9.12 protein, partial (13%)
Length = 460
Score = 37.7 bits (86), Expect = 0.007
Identities = 27/101 (26%), Positives = 42/101 (40%), Gaps = 5/101 (4%)
Frame = +1
Query: 1 MLRKELASLKKSFAECNGQQVEERRLRSIKRDIEKCC-EELENMETQVKEFETEKNILDG 59
M + L ++ AE Q +R S+ KC E +E + KEFETE N L
Sbjct: 106 MTKSRLLETEQHLAEVKSQLTSAQRSNSLAETQLKCMTESYRTIEARTKEFETELNHLQM 285
Query: 60 QV----NEFESKKGELEGLLRDFESEKTNFERRQKEFESKE 96
+ NE E +K E L ++ + +R + K+
Sbjct: 286 KTETLENELEDEKKAHEEALAKYKEIEEQLQRNESSAADKD 408
Score = 33.1 bits (74), Expect = 0.16
Identities = 20/96 (20%), Positives = 42/96 (42%)
Frame = +1
Query: 23 ERRLRSIKRDIEKCCEELENMETQVKEFETEKNILDGQVNEFESKKGELEGLLRDFESEK 82
E+ L +K + ETQ+K ++ + EFE++ L+ E+E
Sbjct: 133 EQHLAEVKSQLTSAQRSNSLAETQLKCMTESYRTIEARTKEFETELNHLQMKTETLENEL 312
Query: 83 TNFERRQKEFESKEKEFEIRVMEFQSKEEEFKVQVK 118
+ ++ +E +K KE E ++ +S + ++ K
Sbjct: 313 EDEKKAHEEALAKYKEIEEQLQRNESSAADKDIKTK 420
>CA853080 weakly similar to GP|9759160|dbj| contains similarity to myosin
heavy chain~gene_id:MEE6.21 {Arabidopsis thaliana},
partial (10%)
Length = 583
Score = 37.4 bits (85), Expect = 0.009
Identities = 35/175 (20%), Positives = 80/175 (45%), Gaps = 10/175 (5%)
Frame = +1
Query: 23 ERRLRSIKRDIEKCCEELE---------NMETQVKEFETEKNILDGQVNEFESKKGELEG 73
E +R +++++EK + E +E + + + E+ + ++ ++ + E
Sbjct: 19 ESHIRGLEKEMEKQAQGFEADLEAVMHDKVEQEQRAIQAEEALRKTRLKNAKTAERLQEE 198
Query: 74 LLRDFESEKTNFERRQKE-FESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAKEEKFEVKM 132
R T F+ +K ++ + E+R + +E+ KV+ +V E+ + +EVK+
Sbjct: 199 FRRLSTQMTTTFDANEKATMKALTEASEVRAQKMLLEEKVHKVKEEV--ESTKAGYEVKL 372
Query: 133 QQFENQVEDNLKSVKALELKENQIEVQIKDLKSKLNNFGGQPKELELTEKQHDEE 187
Q NQ++ ++++ Q+ ++I+D +L N Q K E + EE
Sbjct: 373 NQLSNQID-------TMKVQIQQMLLEIEDKSKQLQN---QKKHQEQVIRDFSEE 507
>TC225389 homologue to UP|Q84T14 (Q84T14) Vacuolar ATPase subunit E
(Fragment), complete
Length = 1222
Score = 37.4 bits (85), Expect = 0.009
Identities = 30/96 (31%), Positives = 49/96 (50%), Gaps = 2/96 (2%)
Frame = +1
Query: 93 ESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAKEEKFEVKMQQFENQVEDNLKSVKALELK 152
E++EK EI V S EEEF ++ L EA+++K + ++ E QVE K +++L
Sbjct: 157 EAEEKANEISV----SAEEEFNIEKLQLVEAEKKKIRQEYERKERQVEIRKKIEYSMQLN 324
Query: 153 ENQIEV--QIKDLKSKLNNFGGQPKELELTEKQHDE 186
++I+V D+ S + KEL HD+
Sbjct: 325 ASRIKVLQAQDDVISSMKE--AASKELLTVSHHHDD 426
>TC225390 homologue to UP|Q84T14 (Q84T14) Vacuolar ATPase subunit E
(Fragment), complete
Length = 1143
Score = 36.6 bits (83), Expect = 0.015
Identities = 23/66 (34%), Positives = 39/66 (58%)
Frame = +2
Query: 93 ESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAKEEKFEVKMQQFENQVEDNLKSVKALELK 152
E++EK EI V S EEEF ++ L EA+++K + ++ E QVE K +++L
Sbjct: 176 EAEEKANEISV----SAEEEFNIEKLQLVEAEKKKIRQEYERKERQVEIRKKIEYSMQLN 343
Query: 153 ENQIEV 158
++I+V
Sbjct: 344 ASRIKV 361
>TC226973 similar to UP|Q6QU76 (Q6QU76) SMC3, partial (36%)
Length = 1707
Score = 36.2 bits (82), Expect = 0.019
Identities = 35/187 (18%), Positives = 80/187 (42%)
Frame = +3
Query: 28 SIKRDIEKCCEELENMETQVKEFETEKNILDGQVNEFESKKGELEGLLRDFESEKTNFER 87
S+ D E +EL + + V + + + +N+ + +++ L +S + +ER
Sbjct: 282 SLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKIKDELNKLKSLEDEYER 461
Query: 88 RQKEFESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAKEEKFEVKMQQFENQVEDNLKSVK 147
+ +E + ++ + + + +KEEE+ +++ L + FE ++ ++D K +
Sbjct: 462 KLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAYRRR---NIKDLHKMLH 632
Query: 148 ALELKENQIEVQIKDLKSKLNNFGGQPKELELTEKQHDEEKEFDTSYMDDDGASEEIDIL 207
+ Q K + NF Q +EL+ + + D D+ E I +L
Sbjct: 633 RCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELD---------AGDEKIKELITVL 785
Query: 208 DNLRESS 214
D ++ S
Sbjct: 786 DQRKDES 806
>TC219020 similar to UP|SRB7_SCHPO (O94376) RNA polymerase II mediator
complex protein srb7, partial (14%)
Length = 1446
Score = 36.2 bits (82), Expect = 0.019
Identities = 40/197 (20%), Positives = 84/197 (42%), Gaps = 18/197 (9%)
Frame = +2
Query: 19 QQVEERRLRSIKRDIEKCCEELENMETQVKEFETEKNILDGQV-----------NEFESK 67
Q + E R ++ +++ E+ N +++V+ + IL+ Q+ NEFE
Sbjct: 476 QLLHESLTRDSEQKLQEAIEKFNNKDSEVQSLLEKIKILEEQIAKAGEQSTSLKNEFEES 655
Query: 68 KGELEGLLRDFESEKTNFERRQKEFESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAKEEK 127
+L L ESE + +R+ + ESK + E E V + + K ++
Sbjct: 656 LSKLTSL----ESENEDLKRQILDAESKSSQ--------SFSENELLVGTNIQLKTKIDE 799
Query: 128 FEVKMQQFENQVEDNLKSVKALELKENQIEVQIKDLKSKLNNF--GGQPKELELTEK--- 182
E + + + + + + L +N I ++ DL+SK + + + L++ +
Sbjct: 800 LE---ESLNHALSEKEAAAQELVSHKNSI-TELNDLQSKSSEIQRANEARTLKVESQLQE 967
Query: 183 --QHDEEKEFDTSYMDD 197
Q EKE +T +++
Sbjct: 968 ALQRHTEKESETKELNE 1018
Score = 35.8 bits (81), Expect = 0.025
Identities = 41/158 (25%), Positives = 70/158 (43%)
Frame = +2
Query: 4 KELASLKKSFAECNGQQVEERRLRSIKRDIEKCCEELENMETQVKEFETEKNILDGQVNE 63
++ SLK F E +L S++ + E ++ + E++ + +E +L G +
Sbjct: 617 EQSTSLKNEFEESLS------KLTSLESENEDLKRQILDAESKSSQSFSENELLVGTNIQ 778
Query: 64 FESKKGELEGLLRDFESEKTNFERRQKEFESKEKEFEIRVMEFQSKEEEFKVQVKVLFEA 123
++K ELE L SEK E +E S K + + QSK E ++ EA
Sbjct: 779 LKTKIDELEESLNHALSEK---EAAAQELVS-HKNSITELNDLQSKSSE----IQRANEA 934
Query: 124 KEEKFEVKMQQFENQVEDNLKSVKALELKENQIEVQIK 161
+ K E ++Q+ + + K L K N +E QIK
Sbjct: 935 RTLKVESQLQEALQRHTEKESETKELNEKLNTLEGQIK 1048
>TC216950
Length = 873
Score = 35.8 bits (81), Expect = 0.025
Identities = 31/143 (21%), Positives = 66/143 (45%), Gaps = 1/143 (0%)
Frame = +2
Query: 48 KEFETEKNILDGQVNEFESKKGELEGLLRDFESEKTNFERRQKEFESKEKEFEIRVM-EF 106
++ E E +++ E +E +R E E Q E E + +E R+ E
Sbjct: 203 RQLEAELKLIE------EETAKRVEEAIRKRVEESLKSEEVQVEIERRLEEGRKRLNDEV 364
Query: 107 QSKEEEFKVQVKVLFEAKEEKFEVKMQQFENQVEDNLKSVKALELKENQIEVQIKDLKSK 166
++ E+ K + + KEE+ + + E +E+N + V+ + +E + + ++ + K
Sbjct: 365 AAQLEKEKEAALIEAKQKEEQARKEKEDLERMLEENRRKVEEAQRREALEQQRREEERYK 544
Query: 167 LNNFGGQPKELELTEKQHDEEKE 189
+ KE + +K+H+EE+E
Sbjct: 545 ELEEMQRQKEEAMRKKKHEEEQE 613
Score = 35.4 bits (80), Expect = 0.033
Identities = 41/159 (25%), Positives = 77/159 (47%), Gaps = 12/159 (7%)
Frame = +2
Query: 3 RKELASLKKSFAECNGQQVEERRLRSIKRDIEKCCEELENMETQVKEFETEKNILDGQVN 62
R++L + K E ++VEE +I++ +E E L++ E QV E E+ + +G+
Sbjct: 200 RRQLEAELKLIEEETAKRVEE----AIRKRVE---ESLKSEEVQV---EIERRLEEGRKR 349
Query: 63 ---------EFESKKGELEGLLRDFES--EKTNFERRQKEFESKEKEFEIR-VMEFQSKE 110
E E + +E ++ ++ EK + ER +E K +E + R +E Q +E
Sbjct: 350 LNDEVAAQLEKEKEAALIEAKQKEEQARKEKEDLERMLEENRRKVEEAQRREALEQQRRE 529
Query: 111 EEFKVQVKVLFEAKEEKFEVKMQQFENQVEDNLKSVKAL 149
EE + K L E + +K E ++ + ++ L +K L
Sbjct: 530 EE---RYKELEEMQRQKEEAMRKKKHEEEQERLNQIKLL 637
>TC225391 homologue to UP|Q84T14 (Q84T14) Vacuolar ATPase subunit E
(Fragment), complete
Length = 1082
Score = 35.8 bits (81), Expect = 0.025
Identities = 23/66 (34%), Positives = 38/66 (56%)
Frame = +3
Query: 93 ESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAKEEKFEVKMQQFENQVEDNLKSVKALELK 152
E++EK EI V S EEEF ++ L EA ++K + ++ E QVE K +++L
Sbjct: 120 EAEEKANEISV----SAEEEFNIEKLQLVEADKKKIRQEYERKERQVEIRKKIEYSMQLN 287
Query: 153 ENQIEV 158
++I+V
Sbjct: 288 ASRIKV 305
>TC225392 homologue to UP|Q84T14 (Q84T14) Vacuolar ATPase subunit E
(Fragment), complete
Length = 1048
Score = 35.8 bits (81), Expect = 0.025
Identities = 23/66 (34%), Positives = 38/66 (56%)
Frame = +3
Query: 93 ESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAKEEKFEVKMQQFENQVEDNLKSVKALELK 152
E++EK EI V S EEEF ++ L EA ++K + ++ E QVE K +++L
Sbjct: 126 EAEEKANEISV----SAEEEFNIEKLQLVEADKKKIRQEYERKERQVEIRKKIEYSMQLN 293
Query: 153 ENQIEV 158
++I+V
Sbjct: 294 ASRIKV 311
>TC233242 similar to UP|Q9FHK5 (Q9FHK5) Gb|AAF19561.1, partial (11%)
Length = 738
Score = 35.8 bits (81), Expect = 0.025
Identities = 28/116 (24%), Positives = 46/116 (39%)
Frame = +3
Query: 18 GQQVEERRLRSIKRDIEKCCEELENMETQVKEFETEKNILDGQVNEFESKKGELEGLLRD 77
G + E ++ + I+ E +N+ +V + E N DG++ S EL
Sbjct: 90 GIEQRENNIKELNTSIDTLKLEKDNLHVEVGSLKEEVNSRDGRIEHLNSHLNELHVEHVQ 269
Query: 78 FESEKTNFERRQKEFESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAKEEKFEVKMQ 133
+ + +E +SK K+ E EE + Q V+ E EEK E Q
Sbjct: 270 LIAGMEEAHKHVEELKSKAKQLE----------EEVERQRTVILEGAEEKREAIRQ 407
>TC206107 weakly similar to UP|Q7RH28 (Q7RH28) Mature-parasite-infected
erythrocyte surface antigen, partial (4%)
Length = 650
Score = 35.4 bits (80), Expect = 0.033
Identities = 38/156 (24%), Positives = 73/156 (46%)
Frame = +1
Query: 32 DIEKCCEELENMETQVKEFETEKNILDGQVNEFESKKGELEGLLRDFESEKTNFERRQKE 91
+ EK +E+ +Q F+ E N++ E++K L+ L + + N E +
Sbjct: 238 EAEKAQSGVEDKISQSVSFKEETNVVGDLP---EAQKKALDELKKLVQEALNNHELTAPK 408
Query: 92 FESKEKEFEIRVMEFQSKEEEFKVQVKVLFEAKEEKFEVKMQQFENQVEDNLKSVKALEL 151
E ++K+ + KEE + K E EEK EV++ + + ++E + K E+
Sbjct: 409 PEPEKKK-----PAAEKKEEVEVTEGKKEAEVIEEKKEVEVTEEKKEIEVT-EEKKEAEV 570
Query: 152 KENQIEVQIKDLKSKLNNFGGQPKELELTEKQHDEE 187
E + EV++ + K KE+E+TE++ + E
Sbjct: 571 IEEKKEVEVTEEK----------KEIEVTEEKKEAE 648
>TC207027 weakly similar to UP|Q9LW95 (Q9LW95) KED, partial (17%)
Length = 1005
Score = 34.7 bits (78), Expect = 0.057
Identities = 38/166 (22%), Positives = 73/166 (43%)
Frame = +3
Query: 38 EELENMETQVKEFETEKNILDGQVNEFESKKGELEGLLRDFESEKTNFERRQKEFESKEK 97
E+ + E + K+ ET+ G+ +E E +G + E EK + + ++ + E +++
Sbjct: 384 EKEKKKEKKDKDEETDTLKEKGKNDEGEDDEGNKKKKKDKKEKEKDHKKEKKDKEEGEKE 563
Query: 98 EFEIRVMEFQSKEEEFKVQVKVLFEAKEEKFEVKMQQFENQVEDNLKSVKALELKENQIE 157
+ ++ V EE K + + + K+ EVK ++ + ED K K ++
Sbjct: 564 DSKVEVSVRDIDIEEIKKEGEKEDKGKDGGKEVKEKK---KKEDKDKKEKKKKVTGKDKT 734
Query: 158 VQIKDLKSKLNNFGGQPKELELTEKQHDEEKEFDTSYMDDDGASEE 203
+ LK KL G K L EK+ D E++ + +EE
Sbjct: 735 KDLSTLKQKLEKING--KIQPLLEKKADIERQIKEVEAEGHVVNEE 866
>TC210484
Length = 839
Score = 34.3 bits (77), Expect = 0.074
Identities = 33/171 (19%), Positives = 67/171 (38%), Gaps = 3/171 (1%)
Frame = +2
Query: 52 TEKNILDGQVNEFESKKGELEGLLRDFESEKTNFERRQKEFESKEKEFEIRVMEFQSKEE 111
+++ ++ G V E K+G +++DF S K E+ E K+ + IR +
Sbjct: 71 SQEELVPGPVIHKEKKRGIFSSVIKDFTSSK---EKHAPLLEKKDPKESIRELSAIFSNA 241
Query: 112 EFKVQVKV---LFEAKEEKFEVKMQQFENQVEDNLKSVKALELKENQIEVQIKDLKSKLN 168
F V + + + + E+ VE + L + ++ + LK +L
Sbjct: 242 NFACNDNVDKPTMDENQLELNIDDIDLEDHVEKRKEQSILGALNKKKLAGTFQSLKGRLK 421
Query: 169 NFGGQPKELELTEKQHDEEKEFDTSYMDDDGASEEIDILDNLRESSDPAKI 219
G ++ + E Q D++ DGA ++I SS+ + +
Sbjct: 422 EMKGNNQKTSVKEGQQDQK----------DGALDQIKKKYGFSSSSNESAV 544
>TC220163 similar to UP|Q75M49 (Q75M49) Unknow protein, partial (7%)
Length = 776
Score = 31.6 bits (70), Expect = 0.48
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Frame = +2
Query: 38 EELENMETQVKEFETEKNILDGQVNEFESKKGELEGLL----RDFESE----KTNFERRQ 89
EE + + ++++E+E+ NI++ + E+ +LE LL D + E K ++R+
Sbjct: 41 EEXKQLGSRLEEYESRSNIIETKSXXLEAXXLKLEELLATQQMDLQGEISCLKEELDQRR 220
Query: 90 KEFESKEKEFE 100
+ E+ KEF+
Sbjct: 221 HDVEAVNKEFD 253
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.312 0.133 0.351
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,000,795
Number of Sequences: 63676
Number of extensions: 88489
Number of successful extensions: 642
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of query: 310
length of database: 12,639,632
effective HSP length: 97
effective length of query: 213
effective length of database: 6,463,060
effective search space: 1376631780
effective search space used: 1376631780
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Medicago: description of AC149206.7