BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149206.10 - phase: 0
(427 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BE610670 71 8e-13
TC233956 70 1e-12
TC233392 70 2e-12
TC222557 65 4e-11
TC222857 64 1e-10
TC222348 64 1e-10
BI973267 63 2e-10
TC231922 63 3e-10
CO986021 63 3e-10
CA851073 62 5e-10
BQ453949 62 6e-10
BU765000 61 8e-10
BI702137 61 8e-10
CO984521 60 2e-09
CD396188 weakly similar to GP|6175788|gb|A ORF144 {Xestia c-nigr... 60 2e-09
CO979823 59 3e-09
BG404993 59 3e-09
CF921567 57 1e-08
BQ629929 57 2e-08
AW423846 56 4e-08
>BE610670
Length = 368
Score = 71.2 bits (173), Expect = 8e-13
Identities = 40/118 (33%), Positives = 56/118 (46%), Gaps = 3/118 (2%)
Frame = -2
Query: 42 ALVEKIHQIALPLDETLDKLIWTDSVDGDLSNKLAFSFLPGHGPTVHW---AKMLWNAYT 98
A ++ I + + L +LD LIW G S K A++ L G G + +K++WN
Sbjct: 361 AFMDDIDDVQIHLS-SLDSLIWRADPSGAYSTKSAYNLLKGEGSFDNEDSASKIIWNLKI 185
Query: 99 PPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLW 156
PP +WR N+LPT NLR+R + S C C + E HI C T LW
Sbjct: 184 PPRTIAFSWRIFKNRLPTKANLRRRQVELPSYRCPLCDLEEENVGHIMFSCTRTRSLW 11
>TC233956
Length = 757
Score = 70.5 bits (171), Expect = 1e-12
Identities = 41/117 (35%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Frame = +2
Query: 44 VEKIHQIALPLDETLDKLIWTDSVDGDLSNKLAF----SFLPGHGPTVHWAKMLWNAYTP 99
++ IH+I L + D +W G +S K A+ S L G + + K LW P
Sbjct: 17 IDHIHEIRLN-NNFNDTWVWRAESTGIISTKSAYQVIKSELDDEGQHLGFKK-LWEIKVP 190
Query: 100 PTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLW 156
P WR L ++LPT DNL KR + C FC Q+ET+SH+F C + LW
Sbjct: 191 PKALSFVWRLLWDRLPTKDNLIKRQIQVEDDLCPFCHSQSETASHLFFTCGKIMPLW 361
>TC233392
Length = 1145
Score = 69.7 bits (169), Expect = 2e-12
Identities = 46/163 (28%), Positives = 66/163 (40%), Gaps = 14/163 (8%)
Frame = -1
Query: 59 DKLIWTDSVDGDLSNKLAFSFLPGH--GPTVHWAKM-LWNAYTPPTGAFITWRFLHNKLP 115
D +W + S + A+ L GH G A LW P + WR + ++LP
Sbjct: 656 DTWVWKHEPNELYSTRSAYKLLQGHLEGEDQDGALQDLWKLKIPAKASIFAWRLIRDRLP 477
Query: 116 TDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLWDWLLKATDQHLDFSSILNI 175
T NL +R + C FCR + E +SHIFL+C LW W + + L S I
Sbjct: 476 TKSNLHRRQVVLEDSLCPFCRIREEDASHIFLECNKIRPLW-WESQTWVRSLGVSPINKR 300
Query: 176 SRMVQHVMNSA-----------IVHIMWSIWLECNNKYFDGVQ 207
+QHV + + + WS+W N F Q
Sbjct: 299 QHFLQHVHGTPGSKRYNRWKTWWIALTWSLWKHRNQVIFQNAQ 171
>TC222557
Length = 1002
Score = 65.1 bits (157), Expect(2) = 4e-11
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Frame = +1
Query: 93 LWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVT 152
LW P WR + ++PT NL +R + ++ C FC +Q E +SH+F CP
Sbjct: 439 LWQLKIPLKATTFAWRLIKERIPTKGNLWRRRVQLNNLMCPFCNRQEEEASHLFFNCPRI 618
Query: 153 LQLWDWLLKATDQHLDFSSILNISRMVQHVMNSAIVHIM-----------WSIWLECN-- 199
L LW W A + + S + +QH + S H+ WSIW N
Sbjct: 619 LPLW-WESLAWTKTVGVFSPIPRQNYMQHTLISKGKHLQARWKCWWVALTWSIWRHRNRI 795
Query: 200 ---NKYFDG 205
NK F+G
Sbjct: 796 VFLNKAFNG 822
Score = 20.4 bits (41), Expect(2) = 4e-11
Identities = 8/24 (33%), Positives = 12/24 (49%)
Frame = +3
Query: 57 TLDKLIWTDSVDGDLSNKLAFSFL 80
TLD +W +G S + A+ L
Sbjct: 324 TLDCWVWKPEPNGQFSTRSAYRML 395
>TC222857
Length = 657
Score = 64.3 bits (155), Expect = 1e-10
Identities = 44/134 (32%), Positives = 60/134 (43%), Gaps = 19/134 (14%)
Frame = -3
Query: 91 KMLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCP 150
K LW P WR L ++LPT NLR R I + C FCR+ ET+SH+F+ C
Sbjct: 619 KDLWKIKIPSKFLMFAWRLLWDRLPTKANLRARQVQISDLTCPFCRRVEETASHMFIHCI 440
Query: 151 VTLQLW----DWL-------LKATDQHLDFSSILNI---SRMVQHVMNSAIVHIMWSIW- 195
T +W +W+ TD + FSS+ SR Q + + WSIW
Sbjct: 439 KTQPIWWETMNWINMQGPLPWSITDHFMQFSSLKEAGIRSRRWQWWW----MAVTWSIWQ 272
Query: 196 ----LECNNKYFDG 205
+ +N FDG
Sbjct: 271 LRNSIVFSNATFDG 230
>TC222348
Length = 995
Score = 63.9 bits (154), Expect = 1e-10
Identities = 33/71 (46%), Positives = 42/71 (58%)
Frame = -3
Query: 105 ITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLWDWLLKATD 164
I W+ LHNK PTDDNL KRG + VS+C F +ET H FL P T Q+ +W+ +
Sbjct: 765 ILWKALHNKFPTDDNLWKRGIHFVSVCTNF-GHDSETVDHFFLYRPFTRQI*NWISSMLN 589
Query: 165 QHLDFSSILNI 175
D SSI N+
Sbjct: 588 CCSDLSSIHNV 556
Score = 49.3 bits (116), Expect = 3e-06
Identities = 28/81 (34%), Positives = 41/81 (50%)
Frame = -2
Query: 271 MKINCDGSVVGSPSCGSIGVIFRASQTMFCGAFAQNIGYATALEAEYSACMFAIEKAKEL 330
+K N D + G+P G +F S F G FA +I +A AE A + AIEKA E
Sbjct: 313 IKCNTDCAARGNPGLAGCGKLFIYSNARFLGNFAYSIAINSAFFAEVMAAIIAIEKAVEN 134
Query: 331 HLTNIWIETDSVNVIRAFHFN 351
+W++TDS + + +N
Sbjct: 133 RWNFLWLKTDSSFQLSSAKYN 71
>BI973267
Length = 406
Score = 63.2 bits (152), Expect = 2e-10
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Frame = +1
Query: 44 VEKIHQIALPLDETLDKLIWTDSVDGDLSNKLAFSFLPGH---GPTVHWAKMLWNAYTPP 100
+++IH +L ++ D W +G+ + K + L + L N PP
Sbjct: 19 IDQIHASSLNIN-LKDTWTWRAEANGEFTTKSTYQVLQSELDDQGQYEGFQQLCNIKIPP 195
Query: 101 TGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLW 156
WR L ++LPT DNL KR + + C FC Q ET+SH+F +C + +W
Sbjct: 196 KALSFAWRLL*DRLPTKDNLVKRQIQVENDLCPFCHNQPETASHLFFKCDKIMPMW 363
>TC231922
Length = 803
Score = 62.8 bits (151), Expect = 3e-10
Identities = 33/101 (32%), Positives = 46/101 (44%), Gaps = 3/101 (2%)
Frame = -3
Query: 59 DKLIWTDSVDGDLSNKLAFSFLP---GHGPTVHWAKMLWNAYTPPTGAFITWRFLHNKLP 115
D + W G S K A+ L P+ ++LW+ PP A +WR ++LP
Sbjct: 444 DSMFWKADSSGVYSTKSAYRLLMPSISPAPSRRIFQILWHLKIPPRAAVFSWRLFLDRLP 265
Query: 116 TDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLW 156
T NL +R I I C C Q E + H+F C +T LW
Sbjct: 264 TRGNLSRRSIPIQDIMCPLCGCQHEEAGHLFFHCKMTKGLW 142
>CO986021
Length = 900
Score = 62.8 bits (151), Expect = 3e-10
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Frame = -1
Query: 37 AYKDNALVEKIHQIALPLDETLDKLIWTDSVDGDLSNKLAFSFL-PGHGPTVHWA--KML 93
A+ D+ IHQ + D ++W G S K A+ L P + P H + K+L
Sbjct: 831 AFMDDISAISIHQ------QLQDSMLWKADPTGIYSTKSAYRLLLPNNRPGQHSSNFKIL 670
Query: 94 WNAYTPPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTL 153
W PP +WR ++L NL +R + I C C E + H+F C +T+
Sbjct: 669 WKLKIPPRAELFSWRLFRDRLSIRANLLRRHVALQDIMCPLCGNHQEEAGHLFFHCRMTI 490
Query: 154 QLW 156
LW
Sbjct: 489 GLW 481
>CA851073
Length = 633
Score = 62.0 bits (149), Expect = 5e-10
Identities = 48/174 (27%), Positives = 68/174 (38%), Gaps = 14/174 (8%)
Frame = +1
Query: 59 DKLIWTDSVDGDLSNKLAFSFLPG---HGPTVHWAKMLWNAYTPPTGAFITWRFLHNKLP 115
D ++W G S K A+ L H + K +W PP A +WR + ++LP
Sbjct: 28 DTMVWKADPCGVYSTKSAYRILMTCNRHVSEANIFKTIWKLKIPPRAAVFSWRLIKDRLP 207
Query: 116 TDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLWDWLLKATDQHLDFSSILNI 175
T NL +R I C C + E + H+F C +T LW W +Q + S+
Sbjct: 208 TRHNLLRRNVSIQENECPLCGYEQEEADHLFFNCKMTRGLW-WESMRWNQIVGPLSVSPA 384
Query: 176 SRMVQHV--MNSAIVHIMW---------SIWLECNNKYFDGVQKPMSTLFNTIL 218
S VQ + H W SIW N F G Q S + + L
Sbjct: 385 SHFVQFCDGFGAGRNHTRWCGWWIALTSSIWKHRNLLIFQGNQFEPSKVMDDAL 546
>BQ453949
Length = 450
Score = 61.6 bits (148), Expect = 6e-10
Identities = 34/101 (33%), Positives = 49/101 (47%), Gaps = 3/101 (2%)
Frame = +3
Query: 59 DKLIWTDSVDGDLSNKLAFSFLPGH-GPTVHWA--KMLWNAYTPPTGAFITWRFLHNKLP 115
D L+W + DG S K A++FL T+ + K +WN PP + R N++P
Sbjct: 30 DLLLWGSNSDGSYSTKSAYNFLKNEDSQTIEDSAFKNIWNLKLPPRACAFS*RIF*NRIP 209
Query: 116 TDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLW 156
T NLR+R + S C C ++ ET H+ C T LW
Sbjct: 210 TKVNLRRRHVKLPSSNCPLCDEEEETVGHVMYSCIKTRHLW 332
>BU765000
Length = 425
Score = 61.2 bits (147), Expect = 8e-10
Identities = 26/66 (39%), Positives = 35/66 (52%)
Frame = +2
Query: 91 KMLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCP 150
K LW PP A WR L ++LPT DNLR++ + C FCR E++ H+F C
Sbjct: 53 KELWKLKVPPKVAVFAWRLLKDRLPTRDNLRRKQVELHEYLCPFCRTMEESACHLFFHCR 232
Query: 151 VTLQLW 156
L +W
Sbjct: 233 KVLPVW 250
>BI702137
Length = 427
Score = 61.2 bits (147), Expect = 8e-10
Identities = 27/76 (35%), Positives = 40/76 (52%)
Frame = +2
Query: 81 PGHGPTVHWAKMLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAE 140
P H P + + LW PP WR L ++LP+ DNL R + ++ C FC+ Q E
Sbjct: 35 PLHQPNSGF-RQLWEIKIPPAALSFAWRLLWDRLPSKDNLISRQIVLQNVLCPFCQSQVE 211
Query: 141 TSSHIFLQCPVTLQLW 156
++SH+F C + LW
Sbjct: 212 SASHLFFTCYKVMPLW 259
>CO984521
Length = 716
Score = 60.1 bits (144), Expect = 2e-09
Identities = 37/106 (34%), Positives = 45/106 (41%), Gaps = 5/106 (4%)
Frame = -2
Query: 56 ETLDKLIWTDSVDGDLSNKLAFSFLPGHGPTVHWA-----KMLWNAYTPPTGAFITWRFL 110
E D+ W G S K A+ L H TV K LW P A WR +
Sbjct: 655 ELSDQWKWAAEPSGCYSTKSAYKAL--HHVTVGEEQDGKFKELWKLRVPLKVAIFAWRLI 482
Query: 111 HNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLW 156
+KLPT NLRK+ + C CR ET+SH+F C LW
Sbjct: 481 QDKLPTKANLRKKRVELQEYLCPLCRSVEETASHLFFHCSKVSPLW 344
>CD396188 weakly similar to GP|6175788|gb|A ORF144 {Xestia c-nigrum
granulovirus}, partial (5%)
Length = 701
Score = 60.1 bits (144), Expect = 2e-09
Identities = 24/66 (36%), Positives = 37/66 (55%)
Frame = -1
Query: 91 KMLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCP 150
+ LW PPT WR L ++LP+ +NL +R + + C FC+ Q E++SH+F C
Sbjct: 632 RQLWEIKIPPTALSFAWRLLWDRLPSKENLIRRQIVLQNDLCPFCQSQVESASHLFFTCH 453
Query: 151 VTLQLW 156
+ LW
Sbjct: 452 KVMPLW 435
>CO979823
Length = 853
Score = 59.3 bits (142), Expect = 3e-09
Identities = 38/123 (30%), Positives = 52/123 (41%), Gaps = 3/123 (2%)
Frame = -2
Query: 37 AYKDNALVEKIHQIALPLDETLDKLIWTDSVDGDLSNKLAFSFLPGH-GPTVHWAKM--L 93
A D+ L E Q P E DK +W G S K + L G + A +
Sbjct: 762 AMADSFLGEITQQQIHPQRE--DKWLWKPEPGGHYSTKSGYHVLWGELTEEIQDADFAEI 589
Query: 94 WNAYTPPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTL 153
W P A WR + ++LPT NLR+R + + C C E ++H+F C TL
Sbjct: 588 WKLKIPTKAAVFAWRLVRDRLPTKSNLRRRQVMVQDMVCPLCNNIEEGAAHLFFNCTKTL 409
Query: 154 QLW 156
LW
Sbjct: 408 PLW 400
>BG404993
Length = 412
Score = 59.3 bits (142), Expect = 3e-09
Identities = 32/102 (31%), Positives = 44/102 (42%), Gaps = 4/102 (3%)
Frame = -3
Query: 59 DKLIWTDSVDGDLSNKLAFSFLP----GHGPTVHWAKMLWNAYTPPTGAFITWRFLHNKL 114
D W G+ S K A+ L G + + LW PP TWR ++++L
Sbjct: 332 DSWTWKADPSGNYSTKTAYELLQEAIRGDNEDGIFVQ-LWKLKIPPKAPVFTWRLINDRL 156
Query: 115 PTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLW 156
PT NLR+R I C C E ++H+F C TL W
Sbjct: 155 PTKVNLRRRQVEISDSLCPLCNNSEEDAAHLFFNCNKTLPFW 30
>CF921567
Length = 686
Score = 57.4 bits (137), Expect = 1e-08
Identities = 28/92 (30%), Positives = 46/92 (49%), Gaps = 3/92 (3%)
Frame = -1
Query: 68 DGDLSNKLAFSFL-PGHGPTVH--WAKMLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRG 124
+G S K A+ L GH + ++W+ PP + +WR N+LPT +NL++R
Sbjct: 677 NGLYSTKSAYKVL*EGHASAIEDRVLNIMWSLKIPPRASAFSWRLFKNRLPTRENLKRRQ 498
Query: 125 CYIVSICCCFCRKQAETSSHIFLQCPVTLQLW 156
+ + C C + E+ +H+F C T LW
Sbjct: 497 VSLHTYSCPLCDLEEESVNHLFFNCSKTRSLW 402
>BQ629929
Length = 437
Score = 56.6 bits (135), Expect = 2e-08
Identities = 26/78 (33%), Positives = 39/78 (49%), Gaps = 4/78 (5%)
Frame = +3
Query: 93 LWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVT 152
LW PP WR L ++LPT +NL +R I + C FC+ Q E++SH+F
Sbjct: 18 LWEIKVPPRALSFAWRLLWDRLPTKENLIRRQVVIENDLCPFCQSQVESASHLFFTYKKV 197
Query: 153 LQLW----DWLLKATDQH 166
+ +W W+ + T H
Sbjct: 198 MPMW*EFNSWVKEDTVMH 251
>AW423846
Length = 385
Score = 55.8 bits (133), Expect = 4e-08
Identities = 31/111 (27%), Positives = 48/111 (42%), Gaps = 10/111 (9%)
Frame = +3
Query: 99 PPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLWDW 158
P AF WR + ++LPT NL +R I + C FC+ + E ++H+F C + LW
Sbjct: 15 PSKAAFFVWRLIRDRLPTKTNLHRRHVEIHDLTCPFCKNKEEDAAHLFFTCSKIMPLWWA 194
Query: 159 LLKATDQHLDFSSILNISRMVQHVMNSA----------IVHIMWSIWLECN 199
L T+ F ++ + Q + N + WSIW N
Sbjct: 195 SLSWTNTTAPFPENPHMHFLQQVLRNGKDTSYQKWQCWWTSLTWSIWQHRN 347
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.327 0.139 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,796,732
Number of Sequences: 63676
Number of extensions: 446511
Number of successful extensions: 3670
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 3597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3655
length of query: 427
length of database: 12,639,632
effective HSP length: 100
effective length of query: 327
effective length of database: 6,272,032
effective search space: 2050954464
effective search space used: 2050954464
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC149206.10