TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149204.7 + phase: 0 
         (600 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC211415                                                              207  8e-54
TC210920 weakly similar to UP|Q75GS6 (Q75GS6) Expressed protein,...   158  6e-39
TC212290 weakly similar to UP|Q9FZE2 (Q9FZE2) T1K7.5 protein (At...   117  1e-26
CO978580                                                              112  5e-25
TC229228 weakly similar to UP|Q9LN90 (Q9LN90) T12C24.7, partial ...    33  0.36
TC231634 similar to UP|Q8RY18 (Q8RY18) AT5g43560/K9D7_6, partial...    32  1.1
TC226037 homologue to UP|Q9AVG7 (Q9AVG7) Isopentenyl diphosphate...    30  2.3
BM108094                                                               30  3.1
TC218291 similar to GB|AAM91387.1|22137084|AY133557 At3g13350/MD...    30  3.1
TC219546 UP|HS70_SOYBN (P26413) Heat shock 70 kDa protein, complete    30  4.0
BU926083                                                               29  6.8
TC220135 similar to UP|Q9FH92 (Q9FH92) Emb|CAB62301.1 (At5g67210...    28  8.9

>TC211415 
          Length = 1065

 Score =  207 bits (528), Expect = 8e-54
 Identities = 99/186 (53%), Positives = 129/186 (69%)
 Frame = +1

Query: 387 IPLGPNHQAEVPEWTGTTHKSDSKWLGTQIWPLQIVKSKLLEGEPVGKGRQDSCRCQVQG 446
           + +GP  QAEVPEWTG   +SDSKWLGT +W L+   ++      VG+GRQ+ C C+  G
Sbjct: 73  VSVGPRFQAEVPEWTGVFSESDSKWLGTHVWSLKN-DTEPATATDVGRGRQEMCSCEFHG 249

Query: 447 SVECVRFHIAEKSAKLKLEIGVAFYQWNLDKAGEEVRRCWTAEEEKKFKDVVKSNPASLD 506
           SVECVR HIAE   KLKLE+G  FY+   D+ GEEV   WT EEE++FKD++KSN +S +
Sbjct: 250 SVECVRLHIAENRMKLKLELGSEFYRLGFDRIGEEVSLQWTTEEEQRFKDIMKSNISSKN 429

Query: 507 RCFWDDIFTTFPKKSRESLVSYYFNVFLLQRRGYQNRHTPDNIDSDDEESEFTPLKGSFG 566
           + FW++    FPKK+R +LV+YYFNVFL+Q R YQNR TP+++DSDD+E EF      FG
Sbjct: 430 KYFWNNPSKYFPKKTRRNLVNYYFNVFLIQLRTYQNRVTPESVDSDDDEVEFGSFSDGFG 609

Query: 567 HQTDKS 572
               KS
Sbjct: 610 MDAVKS 627


>TC210920 weakly similar to UP|Q75GS6 (Q75GS6) Expressed protein, partial
           (8%)
          Length = 900

 Score =  158 bits (400), Expect = 6e-39
 Identities = 72/115 (62%), Positives = 85/115 (73%)
 Frame = +1

Query: 470 FYQWNLDKAGEEVRRCWTAEEEKKFKDVVKSNPASLDRCFWDDIFTTFPKKSRESLVSYY 529
           FY WN D+ GE+V+  W  EEEKKFKDV++SNP S +  FWD IF  FP KSR  LVSYY
Sbjct: 13  FYDWNFDQVGEDVKLLWMEEEEKKFKDVIRSNPPSPETYFWDHIFRAFPTKSRADLVSYY 192

Query: 530 FNVFLLQRRGYQNRHTPDNIDSDDEESEFTPLKGSFGHQTDKSNSFTLLSPKKPQ 584
           FNVF+L+RRGYQNRHTP+NI+SDDE+ E  PL+  FG QT  S    LL+PKK Q
Sbjct: 193 FNVFILERRGYQNRHTPNNINSDDEDDEAGPLRNVFGQQTQNSRGSILLTPKKSQ 357


>TC212290 weakly similar to UP|Q9FZE2 (Q9FZE2) T1K7.5 protein (At1g26580),
           partial (28%)
          Length = 791

 Score =  117 bits (293), Expect = 1e-26
 Identities = 69/185 (37%), Positives = 102/185 (54%), Gaps = 22/185 (11%)
 Frame = +3

Query: 393 HQAEVPEW---------------------TGTTHKSDSKWLGTQIWPLQIVKSKLLEGEP 431
           HQA+VP W                      G   +++ + +GT + P+  ++    + E 
Sbjct: 6   HQADVPAWDILGATNRPNASDAVSVSDFTVGHIDETEKRLMGTCVIPMPQMELSSNDDE- 182

Query: 432 VGKGRQDSCRCQVQGSVECVRFHIAEKSAKLKLEIGVA-FYQWNLDKAGEEVRRCWTAEE 490
           VGK   D C C+ QGS+ CVR HIAE+  K     GV  F +      GE+V   W+AE+
Sbjct: 183 VGKASTD-CSCEDQGSMRCVRQHIAEEREKHIKTFGVEKFTELGFTNMGEQVAENWSAED 359

Query: 491 EKKFKDVVKSNPASLDRCFWDDIFTTFPKKSRESLVSYYFNVFLLQRRGYQNRHTPDNID 550
           E+ F +VV +NP SLD+ FW+ +   FP  +++ +VSYYFNVF+L+RR  QNR+   +ID
Sbjct: 360 EQLFHEVVFNNPVSLDKNFWNYLSIVFPSLTKKEIVSYYFNVFMLRRRAEQNRNDLLSID 539

Query: 551 SDDEE 555
           SD +E
Sbjct: 540 SDSDE 554


>CO978580 
          Length = 670

 Score =  112 bits (280), Expect = 5e-25
 Identities = 54/94 (57%), Positives = 65/94 (68%), Gaps = 7/94 (7%)
 Frame = -1

Query: 498 VKSNPASLDRCFWDDIFTTFPKKSRESLVSYYFNVFLLQRRGYQNRHTPDNIDSDDEESE 557
           ++SNP S +  FWD IF  FP KSR  LVSYYFNVF+L+RRGYQNRHTPD+I+SDD++ E
Sbjct: 670 IRSNPPSXETYFWDHIFRAFPTKSRADLVSYYFNVFILERRGYQNRHTPDDINSDDDDDE 491

Query: 558 FTPLKGSFGHQTDKS-------NSFTLLSPKKPQ 584
             PL+  FGHQT  S           LL+PKK Q
Sbjct: 490 AGPLRNVFGHQTPNSGYQAPNPRGSILLTPKKSQ 389


>TC229228 weakly similar to UP|Q9LN90 (Q9LN90) T12C24.7, partial (10%)
          Length = 885

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 20/53 (37%), Positives = 32/53 (59%)
 Frame = +2

Query: 31  LWDLVGEEYGLGVKVGSSVKLVYSKYLSGLETPLKNVVDGEFPKRDLVGDRVK 83
           +WDL+ +  GLG ++  +V+ V+ + LSG E PL  + +GE P+ D   D  K
Sbjct: 407 VWDLILDNNGLGKEISETVERVFCR-LSGQEPPLFPLPNGE-PQPDKETDNRK 559


>TC231634 similar to UP|Q8RY18 (Q8RY18) AT5g43560/K9D7_6, partial (11%)
          Length = 936

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 46/193 (23%), Positives = 75/193 (38%), Gaps = 16/193 (8%)
 Frame = +3

Query: 135 SELEKVYEYIDGRKSCGTNKMKDTNLVSNMAKKVESEGLVDVLMQDCKTNETSLRKLVNQ 194
           SE EK  +    ++     K KD       A  V  +       QD   +E +  K+   
Sbjct: 84  SEREKKSKKKQAKQKRNNRKGKDKEREERTAASVPDKN------QDNAVDEKNDSKMEEA 245

Query: 195 NAAME---IMDDVSDVANSMPGLSDGSKSCAND-DANDSGDDVLMLDPSSVNRESFGRKR 250
            A  E    M+DVSD+++S+ G+++  +  + D DA+    D    D S VN  +  R  
Sbjct: 246 QAVSEKPDAMEDVSDMSDSVDGVAETLQLDSEDRDASPVNWDT---DASEVNPPTKARNN 416

Query: 251 KRDD-------LMSEMQSWVIRTAKNPCDPVLGSMP-----EKSKWKSYGNQEIWKKVLL 298
             DD       +  +  S VI  + + C     S+P     +  K  S+ N ++ K    
Sbjct: 417 GIDDVSTMQNGISEKRSSSVIDDSSSTCS--TDSLPSVVMNDPHKGNSFSNYKVQKSPSR 590

Query: 299 FREAAFLKKDFGS 311
            +       D GS
Sbjct: 591 GKNRGKTSSDVGS 629


>TC226037 homologue to UP|Q9AVG7 (Q9AVG7) Isopentenyl diphosphate isomerase
           2, partial (98%)
          Length = 1229

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 21/66 (31%), Positives = 30/66 (44%), Gaps = 5/66 (7%)
 Frame = +3

Query: 361 PDSEAKEKLLDSCVPESILDAPPTVNIPLGPNHQAEVPEWTGTTHKSDSK-----WLGTQ 415
           P    +E+LL    P S L  PP   +PL P     +P WT ++  S SK     W+   
Sbjct: 177 PSPSLREQLLSLSPPPSPL-TPPWARLPLPP----PMPAWTPSSAVSCSKTNAFWWMRMT 341

Query: 416 IWPLQI 421
           +W + I
Sbjct: 342 VWLVMI 359


>BM108094 
          Length = 635

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 15/31 (48%), Positives = 19/31 (60%)
 Frame = -3

Query: 77  LVGDRVKFGERLTELQAELVLDDYGEGDVGD 107
           L  +R+ +   L EL AELV D  G+GD GD
Sbjct: 243 LSSNRMAYPNFLPELNAELVRDSSGDGDGGD 151


>TC218291 similar to GB|AAM91387.1|22137084|AY133557 At3g13350/MDC11_14
           {Arabidopsis thaliana;} , partial (22%)
          Length = 697

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +3

Query: 7   TLDLYKLFMVVKDKGGYDVVCKNELWDLVGEEYGLGVKVGSSVKLVYSKYLSGL 60
           +LDL++LF+ V  +GG + V  +  W  V   +     + S+  +V   YLS L
Sbjct: 324 SLDLHRLFVEVTSRGGIEKVIVDRKWKEVILTFNFKDTITSASXVVRKSYLSML 485


>TC219546 UP|HS70_SOYBN (P26413) Heat shock 70 kDa protein, complete
          Length = 2099

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 16/58 (27%), Positives = 29/58 (49%), Gaps = 1/58 (1%)
 Frame = +1

Query: 247 GRKRKRDDLMSEMQSWVIRTAKNPCDPVLGSMPEKSKWKSYGNQEIWKKVLL-FREAA 303
           GR+     + ++M+ W  +   +PCD  +  +  K + K +  +EI   VL+  RE A
Sbjct: 229 GRRFSDSSVQNDMKLWPFKVGGSPCDKPMIVVNYKGEEKKFSAEEISSMVLVKMREVA 402


>BU926083 
          Length = 450

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
 Frame = -3

Query: 10  LYKLFMVVKDKGGYDVVCKNELWD---LVGEEYGLGVKVGSSVKLVYSKYL 57
           L+ +  VV   GG  +VC+N LWD     G E  L +K+G+  +L++SK L
Sbjct: 196 LHPVLHVVPSFGGSTLVCENLLWDRDLKHGFEPILTIKIGT--QLLHSKGL 50


>TC220135 similar to UP|Q9FH92 (Q9FH92) Emb|CAB62301.1 (At5g67210), partial
           (44%)
          Length = 670

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 31/102 (30%), Positives = 45/102 (43%), Gaps = 1/102 (0%)
 Frame = -3

Query: 500 SNPASLDRCFWDDIFTTFPKKSRESLVSYYFNVFLLQRRGYQNRHTPD-NIDSDDEESEF 558
           SN  SL R      F+T P+KS +      F  FLL  R      TP  NI      +  
Sbjct: 353 SNKFSLHRNSLPQTFSTSPEKSCKKT*VLGFPPFLLLAR------TPTVNIADILPGASG 192

Query: 559 TPLKGSFGHQTDKSNSFTLLSPKKPQPTPHTKGRQLVNGLKS 600
              +G   + T +S S+T L  +  +P+ H++ R+   GL S
Sbjct: 191 QSPRGPSTNMTSQSTSYTWLG-RSLRPSLHSEKRRFCTGLHS 69


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.314    0.133    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,959,568
Number of Sequences: 63676
Number of extensions: 382665
Number of successful extensions: 1440
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1436
length of query: 600
length of database: 12,639,632
effective HSP length: 103
effective length of query: 497
effective length of database: 6,081,004
effective search space: 3022258988
effective search space used: 3022258988
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)