BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149134.10 + phase: 0
(478 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BE346420 262 2e-70
TC210830 72 4e-13
BM085107 59 5e-09
TC230406 similar to UP|Q9SE95 (Q9SE95) FH protein interacting pr... 50 2e-06
BU765616 35 0.074
TC208868 UP|Q39868 (Q39868) Protein kinase , complete 31 1.1
TC213372 similar to UP|Q7ZZ71 (Q7ZZ71) SI:dZ44O19.8 (Death-assoc... 31 1.4
TC214696 similar to UP|Q8L683 (Q8L683) Lectin precursor, partial... 30 1.8
TC224689 weakly similar to UP|Q89GA3 (Q89GA3) Blr6442 protein, p... 30 2.4
AW350231 similar to GP|28950344|emb phosphoprotein phosphatase (... 30 3.1
TC208623 similar to UP|Q9ZU96 (Q9ZU96) Expressed protein, partia... 30 3.1
TC221645 similar to UP|Q9LSN8 (Q9LSN8) Protein phosphatase 2C-li... 30 3.1
TC225267 similar to UP|Q7XJH8 (Q7XJH8) Auxin-induced beta-glucos... 29 4.0
TC220214 similar to GB|AAO42946.1|28416831|BT004700 At3g18880 {A... 28 6.9
AI441435 28 9.0
>BE346420
Length = 432
Score = 262 bits (670), Expect = 2e-70
Identities = 121/143 (84%), Positives = 132/143 (91%)
Frame = +2
Query: 173 SICRVWPEIAAVGTESDAGLHFYNFSGSRHVGSVHWSDPSDPRIFKARVNAITASDNSVF 232
SICRVWPEIAAVG++SD GLHFYNFSGSRHVGSVHW+DP DPRIFKA VNAIT+S NSVF
Sbjct: 2 SICRVWPEIAAVGSKSDTGLHFYNFSGSRHVGSVHWTDPLDPRIFKASVNAITSSSNSVF 181
Query: 233 ASFDCPHRENCILEVDKAKLQIVSQLGRQSGNQAKNMVPGKLTFVPTTGVLVGSAVTGGA 292
ASFDCPHRENCI+EVDK KL I +Q RQSGNQAKNMVP KLT++P TGVLVGSAVTGGA
Sbjct: 182 ASFDCPHRENCIIEVDKEKLLIANQFARQSGNQAKNMVPRKLTWIPATGVLVGSAVTGGA 361
Query: 293 FGYSGYIRVWDPRSGEVVWETNE 315
FGYSGY+R+WDPRSG+VVWETNE
Sbjct: 362 FGYSGYVRLWDPRSGDVVWETNE 430
>TC210830
Length = 352
Score = 72.4 bits (176), Expect = 4e-13
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +3
Query: 441 GVIVKIEGGGDRLFISREDVEGIEVWESSHYAGAISVL 478
GVI KIEGGGDRLF+SREDVEGIEVWESSH AGAISVL
Sbjct: 3 GVIKKIEGGGDRLFVSREDVEGIEVWESSHSAGAISVL 116
>BM085107
Length = 413
Score = 58.9 bits (141), Expect = 5e-09
Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Frame = +1
Query: 142 SVWIAHGGQLSSYDWNLIHSATVRTHLDEINSICRVWPEIAAVGTESDAGLHFYNFSGSR 201
S+ +AHG +++S+DW+L +TV T ++S+ + P +AA G +GL + R
Sbjct: 1 SLHVAHGSKITSFDWSLRRKSTVLTQFTAVDSLLALSPSLAAAGANDFSGLQILDLDMGR 180
Query: 202 HVGSVHWSDPSDPRIFKARVNAITASDNSVFASFDCPHR-ENCILEVDKAKLQIVSQLG 259
+++W + + + V AI +S ++F SF+ R N I+ D L V+++G
Sbjct: 181 VRETLNWENVTKS---GSTVQAIGSSPENMFVSFESSRRNSNSIMVYDLHTLTPVTEIG 348
>TC230406 similar to UP|Q9SE95 (Q9SE95) FH protein interacting protein FIP2,
partial (95%)
Length = 1338
Score = 50.1 bits (118), Expect = 2e-06
Identities = 34/98 (34%), Positives = 51/98 (51%), Gaps = 5/98 (5%)
Frame = +3
Query: 6 TSQTTTDSNVTDRIKLNVGGKLFETTLSTIRSGGPDSLLFAL---SNRFSNDPNP--VFI 60
T+ S+++ ++LN+GGK F TT T+ PDS+L A+ + DP+ VF+
Sbjct: 93 TTMKGFQSDLSSAVRLNIGGKKFCTTTDTLTQREPDSMLAAMFSGRHTLCQDPDKGYVFV 272
Query: 61 DRDPEIFSVFLSLLRTNHLPSTARRFSKQELADEALFY 98
DRD + F L+ LR +P T EL EA +Y
Sbjct: 273 DRDGKHFRHILNWLRDGVVP-TLEESQYSELLREAEYY 383
>BU765616
Length = 421
Score = 35.0 bits (79), Expect = 0.074
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +1
Query: 17 DRIKLNVGGKLFETTLSTIRSGGPDSLLFAL 47
DR+K NVGG++ ETT +T+ + G +S+ A+
Sbjct: 271 DRVKFNVGGRVMETTSTTLANAGRNSMFGAM 363
>TC208868 UP|Q39868 (Q39868) Protein kinase , complete
Length = 1217
Score = 31.2 bits (69), Expect = 1.1
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +1
Query: 203 VGSVHWSDPSDPRIFKARVNAIT----ASDNSVFASFDCPHRENCILEVDKAKLQIVSQL 258
VG+ + DP DP+ F+ + I A + V S +C H +CI + AK +S++
Sbjct: 676 VGAYPFEDPEDPKNFRKSIGRIMSVQYAIPDYVRVSKECRHLISCIFVANPAKRISISEI 855
>TC213372 similar to UP|Q7ZZ71 (Q7ZZ71) SI:dZ44O19.8 (Death-associated
protein 6) (Fragment), partial (7%)
Length = 446
Score = 30.8 bits (68), Expect = 1.4
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 404 WSRVKEVVECESERDRESDGEGVYRRNFVDKREDSEKG 441
WS+ KE E E D E + ++ NF+ D KG
Sbjct: 81 WSKSKEEQEQPEEEDEEEEPRAAFQLNFMSGERDKNKG 194
>TC214696 similar to UP|Q8L683 (Q8L683) Lectin precursor, partial (80%)
Length = 1701
Score = 30.4 bits (67), Expect = 1.8
Identities = 23/81 (28%), Positives = 40/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 115 GIDASIVASVRPASEGLSSTFTAAENGSVWIAHGGQLSSYDWNLIHSATVRTHL--DEIN 172
GID + + SV+ AS GLS+ + + + + S +LIH + +++ D +N
Sbjct: 543 GIDVNSIKSVKTASWGLSN----GQVAEILVTYNAATSLLVASLIHPSKKTSYILSDTVN 710
Query: 173 SICRVWPEIAAVGTESDAGLH 193
+ PE +VG + GLH
Sbjct: 711 LKSNL-PEWVSVGFSATTGLH 770
>TC224689 weakly similar to UP|Q89GA3 (Q89GA3) Blr6442 protein, partial (19%)
Length = 449
Score = 30.0 bits (66), Expect = 2.4
Identities = 22/71 (30%), Positives = 31/71 (42%), Gaps = 10/71 (14%)
Frame = -3
Query: 99 GIDSHLRNATSPPPFSGIDASIVASV----------RPASEGLSSTFTAAENGSVWIAHG 148
G SH A +PP FSG A V + + G S AA+N S+ ++HG
Sbjct: 279 GPPSHQSRARNPPGFSGRGACHVGLLDERDVGALLRQKVGGGDSDDSAAADNYSLGVSHG 100
Query: 149 GQLSSYDWNLI 159
L + D N +
Sbjct: 99 TPLRTADGNSV 67
>AW350231 similar to GP|28950344|emb phosphoprotein phosphatase (ppt-1)
{Neurospora crassa}, partial (18%)
Length = 511
Score = 29.6 bits (65), Expect = 3.1
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 8/98 (8%)
Frame = -1
Query: 146 AHGGQLSSYDWNLIH---SATVRTHLDEINSICRVWPEIAA----VGTESDAGLHFYNFS 198
AHGG S W+L H A + E + ++WP + A V + G Y
Sbjct: 418 AHGGLRSRTRWSLYHRLLCAQILRLDREQGRVHQLWPVLRARIRQVRCRTSPGHQAYGIR 239
Query: 199 GSRHVG-SVHWSDPSDPRIFKARVNAITASDNSVFASF 235
RHVG H P + + + +TASD+ + +F
Sbjct: 238 EQRHVGHDGHVKLPKCEMTQQLQSHDLTASDDILL*NF 125
>TC208623 similar to UP|Q9ZU96 (Q9ZU96) Expressed protein, partial (22%)
Length = 734
Score = 29.6 bits (65), Expect = 3.1
Identities = 12/38 (31%), Positives = 19/38 (49%)
Frame = +1
Query: 152 SSYDWNLIHSATVRTHLDEINSICRVWPEIAAVGTESD 189
S D N H A R +LD + + +WPE+ + S+
Sbjct: 448 SKADMNAFHVAAKRGNLDIVRELLNIWPEVCKLCDSSN 561
>TC221645 similar to UP|Q9LSN8 (Q9LSN8) Protein phosphatase 2C-like protein,
partial (29%)
Length = 680
Score = 29.6 bits (65), Expect = 3.1
Identities = 14/46 (30%), Positives = 24/46 (51%)
Frame = +2
Query: 102 SHLRNATSPPPFSGIDASIVASVRPASEGLSSTFTAAENGSVWIAH 147
S R +SP P + AS A+ P + +S+T +A + W++H
Sbjct: 401 SRTRARSSPAPSAPSSASTTATAAPIAPAMSATTCSAISKRYWLSH 538
>TC225267 similar to UP|Q7XJH8 (Q7XJH8) Auxin-induced beta-glucosidase,
partial (69%)
Length = 2006
Score = 29.3 bits (64), Expect = 4.0
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Frame = -1
Query: 387 NCYKGQVFVGRGGEL-----EVWSRVKEVVE-CESERDRESDGEGVYRRNFVDK 434
+C+KGQ+ +GRG + VW + VE +S DR G+G + F +K
Sbjct: 605 SCFKGQLLMGRGAHISWA*VSVWLG*RFAVEHTQSHLDRNKVGQGKVKIIFGNK 444
>TC220214 similar to GB|AAO42946.1|28416831|BT004700 At3g18880 {Arabidopsis
thaliana;} , partial (79%)
Length = 607
Score = 28.5 bits (62), Expect = 6.9
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = -1
Query: 27 LFETTLSTIRSGGPDSLLFALSNRFSNDPNPVFIDRDPEIFSVFLSLLRTNHLPSTARRF 86
LFETT+ T F PNPV + +P S+F +L R +T RRF
Sbjct: 184 LFETTVPT--------------TCFIFSPNPVSLRNNP*DASIFFALFRQRR--NTVRRF 53
Query: 87 SKQELADEAL 96
+E++
Sbjct: 52 DSMRRGNESM 23
>AI441435
Length = 380
Score = 28.1 bits (61), Expect = 9.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 401 LEVWSRVKEVVECESERDRESDGEG 425
+EVW C+SER+RE +G G
Sbjct: 15 VEVWCLNLNAEHCDSEREREENGHG 89
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.315 0.134 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,157,173
Number of Sequences: 63676
Number of extensions: 302384
Number of successful extensions: 1352
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1351
length of query: 478
length of database: 12,639,632
effective HSP length: 101
effective length of query: 377
effective length of database: 6,208,356
effective search space: 2340550212
effective search space used: 2340550212
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Medicago: description of AC149134.10