BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149131.7 + phase: 0
(111 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CD394306 52 3e-16
BE058055 43 2e-05
TC219334 weakly similar to UP|Q9FUZ9 (Q9FUZ9) SKP1 interacting p... 38 6e-04
TC211437 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%) 35 0.004
TC234721 weakly similar to UP|Q9LPY0 (Q9LPY0) T23J18.22, partial... 35 0.005
TC224885 similar to UP|Q93YI3 (Q93YI3) Calcium dependent calmodu... 35 0.005
TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {A... 34 0.009
TC226840 33 0.020
TC211828 similar to UP|RPIA_ARATH (Q9ZU38) Probable-ribose 5-pho... 33 0.020
TC205204 homologue to UP|Q43558 (Q43558) Proline rich protein pr... 33 0.020
TC206122 weakly similar to PIR|C86473|C86473 arabinogalactan-pro... 33 0.020
TC223353 weakly similar to UP|Q9SEW3 (Q9SEW3) Receptor-like prot... 33 0.027
TC203287 weakly similar to UP|Q41645 (Q41645) Extensin (Fragment... 33 0.027
TC220200 weakly similar to UP|Q7M4A3 (Q7M4A3) Spermatid-specific... 32 0.035
TC216892 UP|Q6RUF9 (Q6RUF9) Proline dehydrogenase , complete 32 0.035
TC215397 weakly similar to UP|Q8S9J6 (Q8S9J6) AT5g10770/T30N20_4... 32 0.035
TC214193 similar to UP|Q8RU73 (Q8RU73) Ribose-5-phosphate isomer... 32 0.035
TC203433 similar to PIR|T09390|T09390 21K protein precursor - al... 32 0.035
TC214285 similar to UP|Q8RU73 (Q8RU73) Ribose-5-phosphate isomer... 32 0.035
BE657212 31 0.10
>CD394306
Length = 403
Score = 52.4 bits (124), Expect(2) = 3e-16
Identities = 31/47 (65%), Positives = 36/47 (75%), Gaps = 4/47 (8%)
Frame = -1
Query: 60 PMSSSEAPYEAEASAPAPAPSSGE----KSSSSTRLDCVAAIVGIML 102
PMSS AP+EAEA PAPAPSSGE KSS+S RL+C AIVG++L
Sbjct: 325 PMSSG-APFEAEA--PAPAPSSGEFEGKKSSASARLNCAGAIVGVLL 194
Score = 47.0 bits (110), Expect(2) = 3e-16
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = -3
Query: 40 ASPGVLPYVTSPDISSFFPTPMSSS 64
ASPG+LPYVT+PDISSFFPTP S S
Sbjct: 401 ASPGLLPYVTAPDISSFFPTP*SQS 327
>BE058055
Length = 424
Score = 43.1 bits (100), Expect = 2e-05
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = +1
Query: 8 TIIKLLAFVFVVIILLDNSHAVSSTTTEPTISASPGVLPYVTSPDISSFF 57
T KL +FVF+ ++L D+ SST EPTISASP PYV +P I SFF
Sbjct: 214 TSSKLSSFVFLFVLLADSLALRSST--EPTISASP--KPYVVAPGIISFF 351
>TC219334 weakly similar to UP|Q9FUZ9 (Q9FUZ9) SKP1 interacting partner 6
(Fragment), partial (29%)
Length = 1451
Score = 38.1 bits (87), Expect = 6e-04
Identities = 22/60 (36%), Positives = 33/60 (54%)
Frame = +1
Query: 30 SSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSSGEKSSSST 89
S +TT+ I+ P LP+ SP S PTP S+ + A S +P P+SG +++ST
Sbjct: 268 SRSTTQTLIT--PSSLPFPRSPPPPSAPPTPSSAPPSTSSAAPSTTSPPPTSGSSTAAST 441
>TC211437 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%)
Length = 857
Score = 35.4 bits (80), Expect = 0.004
Identities = 23/70 (32%), Positives = 39/70 (54%), Gaps = 5/70 (7%)
Frame = -1
Query: 25 NSHAVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSS-----EAPYEAEASAPAPAP 79
+S + SS+++ P+ S+S L +S S P+P++SS +P E S+ +P+
Sbjct: 599 SSSSSSSSSSSPSSSSSSSPLSSPSSSSSPSSLPSPLASSSGSPPSSPSSPENSSSSPSS 420
Query: 80 SSGEKSSSST 89
SS SSSS+
Sbjct: 419 SSSGPSSSSS 390
Score = 26.9 bits (58), Expect = 1.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 53 ISSFFPTPMSSSEAPYEAEASAPAPAPSSGEKSSS 87
+SS + SSS +P + +S+P +PSS SS
Sbjct: 608 VSSSSSSSSSSSSSPSSSSSSSPLSSPSSSSSPSS 504
>TC234721 weakly similar to UP|Q9LPY0 (Q9LPY0) T23J18.22, partial (11%)
Length = 423
Score = 35.0 bits (79), Expect = 0.005
Identities = 25/66 (37%), Positives = 35/66 (52%)
Frame = +1
Query: 24 DNSHAVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSSGE 83
D + A S TT P+ ++SP P +P SSF TP SS+ + A S+ +PSS
Sbjct: 193 DPNRA*SG*TTNPSPASSPP*KPLALTP--SSFSLTPHSSTTSRSSASPSSATNSPSSPP 366
Query: 84 KSSSST 89
SS +T
Sbjct: 367 PSSPTT 384
>TC224885 similar to UP|Q93YI3 (Q93YI3) Calcium dependent calmodulin
independent protein kinase (Fragment), partial (92%)
Length = 1484
Score = 35.0 bits (79), Expect = 0.005
Identities = 20/62 (32%), Positives = 33/62 (52%)
Frame = +3
Query: 28 AVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSSGEKSSS 87
A SS++ PT +A+P + ++P +SS S++ +P SAP P P++ SS
Sbjct: 3 ATSSSSRAPTRTATPSTSSWSSAPAVSS------STASSPRATTPSAPPPTPAARSSPSS 164
Query: 88 ST 89
T
Sbjct: 165IT 170
>TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;} , partial (46%)
Length = 902
Score = 34.3 bits (77), Expect = 0.009
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = -3
Query: 25 NSHAVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSSGEK 84
+S + SS ++ ++S+S G P TSP SS + S + +S +P+ SS
Sbjct: 531 SSSSSSSESSSESLSSSSGSPPRWTSPSSSSSSSSSSSPPSGASSSSSSLSSPSSSSSSS 352
Query: 85 SSSST 89
SSSS+
Sbjct: 351 SSSSS 337
>TC226840
Length = 970
Score = 33.1 bits (74), Expect = 0.020
Identities = 22/62 (35%), Positives = 31/62 (49%), Gaps = 3/62 (4%)
Frame = +2
Query: 30 SSTTTEPTISASPGVLPYVT---SPDISSFFPTPMSSSEAPYEAEASAPAPAPSSGEKSS 86
+STTTEP+ P + P SP SS P+ +S +A +AS+P P + S
Sbjct: 233 TSTTTEPSAFTPPTLPPSTASPPSPSCSSATPSLTASPDAFAAVKASSPVAPPLAPSSPS 412
Query: 87 SS 88
SS
Sbjct: 413 SS 418
>TC211828 similar to UP|RPIA_ARATH (Q9ZU38) Probable-ribose 5-phosphate
isomerase (Phosphoriboisomerase) , partial (47%)
Length = 729
Score = 33.1 bits (74), Expect = 0.020
Identities = 21/53 (39%), Positives = 32/53 (59%), Gaps = 2/53 (3%)
Frame = +2
Query: 39 SASPGVLPYVTSPDISSFF--PTPMSSSEAPYEAEASAPAPAPSSGEKSSSST 89
S++P P +SP +S PT SS+ +P + ASAPAP PS+ +S+S+
Sbjct: 326 SSTPPPPPPSSSPKTTSRKSPPTRPSSTSSPAWSSASAPAPLPSTPSTASASS 484
Score = 29.6 bits (65), Expect = 0.23
Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +2
Query: 33 TTEPTISASPGVLPYVTSPDIS-SFFPT---PMSSSE----APYEAEASAPAPAPSSGEK 84
TT P+ SASP + T P IS S PT P S+S AP + + APA SS
Sbjct: 539 TTRPSPSASPSPISTPTPPSISPSTAPTRSIPSSTSSRAAAAPSFEKRWSRAPARSSSSS 718
Query: 85 SSS 87
S+S
Sbjct: 719 STS 727
Score = 26.9 bits (58), Expect = 1.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +2
Query: 57 FPTPMSSS--EAPYE-AEASAPAPAPSSGEKSSS 87
FPTP+SS + P+ A ++ P P PSS K++S
Sbjct: 275 FPTPISSPPRKPPWTPASSTPPPPPPSSSPKTTS 376
Score = 26.6 bits (57), Expect = 1.9
Identities = 21/61 (34%), Positives = 27/61 (43%)
Frame = +2
Query: 30 SSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSSGEKSSSST 89
SST P S+SP + P S +P SS A A AP P+ S +SSS
Sbjct: 326 SSTPPPPPPSSSPKTTSRKSPPTRPSSTSSPAWSS-----ASAPAPLPSTPSTASASSSA 490
Query: 90 R 90
+
Sbjct: 491 K 493
>TC205204 homologue to UP|Q43558 (Q43558) Proline rich protein precursor,
partial (44%)
Length = 996
Score = 33.1 bits (74), Expect = 0.020
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +1
Query: 7 TTIIKLLAFVFVVIILLDNSHAVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEA 66
T ++ LLA +F V+ + + S++ PT +SP P +SP P P S A
Sbjct: 121 THLVLLLALIFTVVAGV-GAQGPSTSPAPPTPQSSPP--PIQSSPP-----PVPSSPPPA 276
Query: 67 PYEAEASAPAPAPSSGEKSSS 87
AS P PAP S +S
Sbjct: 277 QSPPPASTPPPAPLSSPPPAS 339
>TC206122 weakly similar to PIR|C86473|C86473 arabinogalactan-protein -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(40%)
Length = 797
Score = 33.1 bits (74), Expect = 0.020
Identities = 27/85 (31%), Positives = 38/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 28 AVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSS-SEAPYEAEASAPAPAPSSGEKSS 86
A S T P +A+P P +P + PTP ++ S+AP +S PAP PS
Sbjct: 189 APSPTANTPPPAAAPA--PATPTPTPAPSSPTPTTAPSQAPGPTTSSPPAPGPSGPAPGP 362
Query: 87 SSTRLDCVAAIVGIMLFSVFLSFIA 111
S D A+ FS+ + IA
Sbjct: 363 SGPAPDQPASEPPSAAFSISKTCIA 437
Score = 32.7 bits (73), Expect = 0.027
Identities = 18/52 (34%), Positives = 25/52 (47%)
Frame = +3
Query: 30 SSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSS 81
S +T+ P S + P +P ++ PTP SS P A + AP P SS
Sbjct: 168 SPSTSAPAPSPTANTPPPAAAPAPATPTPTPAPSSPTPTTAPSQAPGPTTSS 323
Score = 29.6 bits (65), Expect = 0.23
Identities = 23/71 (32%), Positives = 32/71 (44%), Gaps = 5/71 (7%)
Frame = +3
Query: 16 VFVVIILLDNSHAVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAP 75
VF+++ LL + + PT P T+P S+ P P ++ P A A AP
Sbjct: 81 VFMILGLLATACVAQAPGPAPT-------QPPSTTPSPSTSAPAPSPTANTPPPAAAPAP 239
Query: 76 A-----PAPSS 81
A PAPSS
Sbjct: 240 ATPTPTPAPSS 272
>TC223353 weakly similar to UP|Q9SEW3 (Q9SEW3) Receptor-like protein kinase
(Fragment), partial (17%)
Length = 714
Score = 32.7 bits (73), Expect = 0.027
Identities = 23/83 (27%), Positives = 41/83 (48%), Gaps = 10/83 (12%)
Frame = -2
Query: 17 FVVIILLDNSHAV---SSTTTEPTISASPGVLPYVTSPDISSFFPTPMSS-------SEA 66
F +++L N+ + +++T+ T + SP P T + P P SS S
Sbjct: 605 FSLLLLRPNNPPI*TPTASTSSATPTLSPPPTPTPTCGSRAPRLPPPASSAAGSHSPSRT 426
Query: 67 PYEAEASAPAPAPSSGEKSSSST 89
P + S+P+P+P++ SSSS+
Sbjct: 425 PRRSPRSSPSPSPATATASSSSS 357
>TC203287 weakly similar to UP|Q41645 (Q41645) Extensin (Fragment), partial
(14%)
Length = 967
Score = 32.7 bits (73), Expect = 0.027
Identities = 22/85 (25%), Positives = 37/85 (42%)
Frame = +3
Query: 26 SHAVSSTTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSSGEKS 85
S ++ T PT + +P P + +S P P ++ AP A + P P PS+ +
Sbjct: 270 SPPATTPTPTPTAAPTPASSPATSPVPSASSPPAPGTAGPAPGPAGGAEPPPPPSAAFSA 449
Query: 86 SSSTRLDCVAAIVGIMLFSVFLSFI 110
S A I G L +F++ +
Sbjct: 450 SK-------AFIAGSALSGIFVAMV 503
Score = 25.0 bits (53), Expect = 5.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 38 ISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPA 78
++ +PG P T P ++ P P S+ AP + P PA
Sbjct: 114 LAQAPGAAP--TQPPTTTPSPPPPRSAPAPAPTPPATPPPA 230
Score = 24.3 bits (51), Expect = 9.5
Identities = 13/51 (25%), Positives = 21/51 (40%)
Frame = +3
Query: 36 PTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPAPSSGEKSS 86
P + +P P +P ++ P P +S A AP P+S +S
Sbjct: 189 PAPAPTPPATPPPATPPPAAATPPPATSPPATTPTPTPTAAPTPASSPATS 341
>TC220200 weakly similar to UP|Q7M4A3 (Q7M4A3) Spermatid-specific protein T2
precursor, partial (40%)
Length = 506
Score = 32.3 bits (72), Expect = 0.035
Identities = 29/79 (36%), Positives = 36/79 (44%), Gaps = 9/79 (11%)
Frame = +2
Query: 17 FVVIILLDNSHAVSSTTTEPTISASPGVLPYVTSPDISSF-FPTPMSS--------SEAP 67
F V+ILL S V+ T T + SP P P SS FP+P S+ S P
Sbjct: 143 FSVLILLV-SLLVNIAATAATAAESPAPTPTPDFPPSSSPPFPSPASNPSTANFPPSPTP 319
Query: 68 YEAEASAPAPAPSSGEKSS 86
+ S PAP+PSS S
Sbjct: 320 APSHHSPPAPSPSSNPSPS 376
>TC216892 UP|Q6RUF9 (Q6RUF9) Proline dehydrogenase , complete
Length = 1841
Score = 32.3 bits (72), Expect = 0.035
Identities = 14/44 (31%), Positives = 24/44 (53%)
Frame = +2
Query: 31 STTTEPTISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASA 74
+TTT+P +A P + P + SP + P+P ++ P A +A
Sbjct: 128 NTTTKPLNAAQPSISPAIASPSLFERSPSPPAADVIPASAAGTA 259
>TC215397 weakly similar to UP|Q8S9J6 (Q8S9J6) AT5g10770/T30N20_40, partial
(76%)
Length = 1447
Score = 32.3 bits (72), Expect = 0.035
Identities = 23/65 (35%), Positives = 34/65 (51%), Gaps = 6/65 (9%)
Frame = +1
Query: 25 NSHAVSSTTTEPT------ISASPGVLPYVTSPDISSFFPTPMSSSEAPYEAEASAPAPA 78
+++ SST T P+ SASP P ++ S+ T +SS AP + ASA P+
Sbjct: 349 HAYTASSTATVPSQLATSAASASP*PPPTSSTTSSSAAARTTRASSAAPPASLASAATPS 528
Query: 79 PSSGE 83
PSS +
Sbjct: 529 PSSNK 543
>TC214193 similar to UP|Q8RU73 (Q8RU73) Ribose-5-phosphate isomerase
precursor , partial (37%)
Length = 601
Score = 32.3 bits (72), Expect = 0.035
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +3
Query: 45 LPYVTSPDISSFFP--TPMSSSEAPYEAEASAPAPAPSSGEKSSSSTR 90
LP+ T+P + F+ TP++ + P + SAP+P+P + + S TR
Sbjct: 174 LPHTTTPPRALFYAPLTPLNCALHPTPSPPSAPSPSPRTTSRDSPPTR 317
>TC203433 similar to PIR|T09390|T09390 21K protein precursor - alfalfa
{Medicago sativa;} , partial (88%)
Length = 825
Score = 32.3 bits (72), Expect = 0.035
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Frame = +2
Query: 36 PTISASPGVLPYVTSPDISSFFP--------TPMSSSEAPYEAEASAPAPAPSSGEKSSS 87
P S+SP P T P SS P TP SSS P + ++ P P S + +++
Sbjct: 119 PPTSSSPPAAPPSTQPSASSPSPSTPPPSSKTPTSSSRQPSPSPSTTPRPPKPSSQNATN 298
Query: 88 S 88
S
Sbjct: 299 S 301
>TC214285 similar to UP|Q8RU73 (Q8RU73) Ribose-5-phosphate isomerase
precursor , partial (81%)
Length = 951
Score = 32.3 bits (72), Expect = 0.035
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 45 LPYVTSPDISSFFP--TPMSSSEAPYEAEASAPAPAPSSGEKSSSSTR 90
LP+ T+P + F+ TP++ + P + SAP+P+P + + S TR
Sbjct: 34 LPHTTTPPRALFYAPLTPLNCALHPTPSPPSAPSPSPRTTSRDSPPTR 177
>BE657212
Length = 595
Score = 30.8 bits (68), Expect = 0.10
Identities = 27/80 (33%), Positives = 36/80 (44%), Gaps = 10/80 (12%)
Frame = -1
Query: 24 DNSHAVSSTTTEPTISA--SPGVLPYVTSPDISSFFPTPMSS-----SEAPYEAEASAPA 76
D + + TTT P+ S S P +SP SS P SS S AP + A
Sbjct: 520 DAXXSSTXTTTPPSSSCATSGSKPPNPSSPSRSSPMPPSTSSCTVTTSSAPSASAPPGSA 341
Query: 77 PAPSSGEKSSSST---RLDC 93
P+P++ SSSS R+ C
Sbjct: 340 PSPTARSSSSSSASQFRVSC 281
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.315 0.126 0.343
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,725,799
Number of Sequences: 63676
Number of extensions: 82268
Number of successful extensions: 1986
Number of sequences better than 10.0: 517
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1871
length of query: 111
length of database: 12,639,632
effective HSP length: 87
effective length of query: 24
effective length of database: 7,099,820
effective search space: 170395680
effective search space used: 170395680
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)
Medicago: description of AC149131.7