TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149131.14 + phase: 0 
         (28 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CO978924                                                               28  1.5
TC219527 homologue to UP|ZFP6_ARATH (Q39265) Zinc finger protein...    27  2.0

>CO978924 
          Length = 863

 Score = 27.7 bits (60), Expect = 1.5
 Identities = 10/22 (45%), Positives = 17/22 (76%)
 Frame = +1

Query: 3   YFLLTHLCGISHRIWCTLSTIC 24
           +FLL+ L GISH ++C ++ +C
Sbjct: 781 HFLLSILVGISHCVFCIVNAMC 846


>TC219527 homologue to UP|ZFP6_ARATH (Q39265) Zinc finger protein 6, partial
           (28%)
          Length = 880

 Score = 27.3 bits (59), Expect = 2.0
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 4   FLLTHLCGISHRIWCTLSTI 23
           FL+TH+  I+H IW  L+T+
Sbjct: 166 FLITHIPHITHHIWLKLNTM 225


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.337    0.140    0.519 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,060,008
Number of Sequences: 63676
Number of extensions: 16026
Number of successful extensions: 280
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 280
length of query: 28
length of database: 12,639,632
effective HSP length: 4
effective length of query: 24
effective length of database: 12,384,928
effective search space: 297238272
effective search space used: 297238272
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 53 (25.0 bits)