BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149080.7 - phase: 0
(165 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC215848 285 7e-78
TC215849 weakly similar to UP|Q84TF6 (Q84TF6) At1g09740, partial... 275 7e-75
TC218003 238 1e-63
TC206752 weakly similar to UP|Q8H454 (Q8H454) Universal stress p... 166 5e-42
BM143682 weakly similar to GP|12060514|dbj P0475H04.9 {Oryza sat... 151 1e-37
TC211612 similar to UP|Q8BUX8 (Q8BUX8) Mus musculus 16 days embr... 99 9e-36
TC215329 similar to UP|Q6T7D1 (Q6T7D1) Fiber protein Fb19 (Fragm... 115 7e-27
TC215327 similar to UP|Q6T7D1 (Q6T7D1) Fiber protein Fb19 (Fragm... 115 7e-27
TC215330 similar to UP|Q6T7D1 (Q6T7D1) Fiber protein Fb19 (Fragm... 108 9e-25
TC207729 104 2e-23
CK605854 93 7e-20
TC221051 similar to UP|Q9SWV2 (Q9SWV2) ER6 protein (Fragment), p... 91 3e-19
BM892835 85 1e-17
BG650653 83 5e-17
TC206542 similar to UP|Q8S3R7 (Q8S3R7) Ethylene-responsive prote... 71 2e-13
TC215797 weakly similar to GB|AAL49942.1|17979251|AY070476 AT3g5... 71 3e-13
TC225833 similar to GB|AAL49942.1|17979251|AY070476 AT3g53990/F5... 71 3e-13
AW761238 66 7e-12
TC224740 65 1e-11
TC225830 similar to GB|AAL49942.1|17979251|AY070476 AT3g53990/F5... 65 1e-11
>TC215848
Length = 888
Score = 285 bits (729), Expect = 7e-78
Identities = 134/157 (85%), Positives = 148/157 (93%)
Frame = +2
Query: 6 ENGRRIMVAIDEGEESIYALTWCLKNLVFQNSKDHLILLYVKPPRVVYSAFDGTGYLFSS 65
E RRI+VA+DEGEES+YAL+WCLKNL FQNSKD L+LLYVKPPRV YSAFDGTGYLFSS
Sbjct: 59 EQQRRILVAVDEGEESMYALSWCLKNLAFQNSKDTLLLLYVKPPRVTYSAFDGTGYLFSS 238
Query: 66 DITATMEKYSQQVADCVLEKAKIVCNDVQNVETRIENGDPRDVICQAVQKMGVDILVMGS 125
DITATME+YSQQVADCVLEKAK +CN+++NVETR+ENGDPRDVICQ VQK+G D+LVMGS
Sbjct: 239 DITATMERYSQQVADCVLEKAKKLCNNIENVETRVENGDPRDVICQMVQKLGADVLVMGS 418
Query: 126 HGYGVIKRAFLGSVSNHCAQNVKCPVLIVKKPKSTTG 162
HGYG+IKRAFLGSVSNHCAQNVKCPVLIVKKPK TTG
Sbjct: 419 HGYGLIKRAFLGSVSNHCAQNVKCPVLIVKKPKPTTG 529
>TC215849 weakly similar to UP|Q84TF6 (Q84TF6) At1g09740, partial (36%)
Length = 751
Score = 275 bits (703), Expect = 7e-75
Identities = 130/157 (82%), Positives = 144/157 (90%)
Frame = +2
Query: 6 ENGRRIMVAIDEGEESIYALTWCLKNLVFQNSKDHLILLYVKPPRVVYSAFDGTGYLFSS 65
E RRI+VA+DEGEES+YAL+WCLKNL FQNSKD LILLYVKPPRV YSAFDGTGY F+S
Sbjct: 95 EEERRILVAVDEGEESMYALSWCLKNLSFQNSKDTLILLYVKPPRVTYSAFDGTGYFFAS 274
Query: 66 DITATMEKYSQQVADCVLEKAKIVCNDVQNVETRIENGDPRDVICQAVQKMGVDILVMGS 125
DITATME+YSQQVADCVLEKAK +C +++NVETR+ENGD RDVICQ VQK+G D+LVMGS
Sbjct: 275 DITATMERYSQQVADCVLEKAKKLCKNIENVETRVENGDTRDVICQMVQKLGADVLVMGS 454
Query: 126 HGYGVIKRAFLGSVSNHCAQNVKCPVLIVKKPKSTTG 162
HGYG+IKRAFLGSVSNHCAQNVKCPVLIVKKPK T G
Sbjct: 455 HGYGLIKRAFLGSVSNHCAQNVKCPVLIVKKPKPTAG 565
>TC218003
Length = 797
Score = 238 bits (607), Expect = 1e-63
Identities = 114/165 (69%), Positives = 137/165 (82%), Gaps = 11/165 (6%)
Frame = +2
Query: 9 RRIMVAIDEGEESIYALTWCLKNLVFQNSKDHLILLYVKPPRVVYSAFDGTG-------- 60
RR++VA+DEGEES+YAL+W LKN++FQNS+D LILLYVKPP VYS D TG
Sbjct: 77 RRVLVAVDEGEESMYALSWSLKNIIFQNSRDTLILLYVKPPHAVYSPLDSTGRIDDPETP 256
Query: 61 -YLFSSDITATMEKYSQQVADCVLEKAKIVCNDVQNV--ETRIENGDPRDVICQAVQKMG 117
YLFS DI+A +EKYSQ+VADCVLEKAK +C D+QNV ETR+E+GDPRDVIC QK+G
Sbjct: 257 GYLFSPDISAAIEKYSQEVADCVLEKAKKLCKDLQNVMVETRVESGDPRDVICDMSQKLG 436
Query: 118 VDILVMGSHGYGVIKRAFLGSVSNHCAQNVKCPVLIVKKPKSTTG 162
D+L+MGSHGYGV+KRAFLGSVSN+C+QNVKCP+LIVKKPK + G
Sbjct: 437 ADLLIMGSHGYGVVKRAFLGSVSNYCSQNVKCPILIVKKPKPSAG 571
>TC206752 weakly similar to UP|Q8H454 (Q8H454) Universal stress protein
USP1-like protein, partial (29%)
Length = 896
Score = 166 bits (420), Expect = 5e-42
Identities = 82/160 (51%), Positives = 115/160 (71%), Gaps = 4/160 (2%)
Frame = +3
Query: 2 AGITENGRRIMVAIDEGEESIYALTWCLKNLVFQNSKDHLILLYVKPPRVVYSAFDGTGY 61
A + + R+IMVA+DE +ES++AL+WC+ NL+ + +K L+LLYV+PP YS D GY
Sbjct: 117 AEMEKKERKIMVAVDESQESMHALSWCITNLISETNK--LVLLYVRPPSAFYS-LDAAGY 287
Query: 62 LFSSDITATMEKYSQQVADCVLEKAKIVCNDVQ----NVETRIENGDPRDVICQAVQKMG 117
FSSD+ MEKYS +A+ V+E+A+ VC D+ N+E + G ++VIC AV+K+
Sbjct: 288 NFSSDVVDAMEKYSMHLANSVMERAEAVCRDLNATNINMERVVGVGHAKNVICSAVKKLE 467
Query: 118 VDILVMGSHGYGVIKRAFLGSVSNHCAQNVKCPVLIVKKP 157
D LVMG+HGYG KRA LGSVS+HCA++ KCPV+IVK+P
Sbjct: 468 ADTLVMGTHGYGFFKRALLGSVSDHCAKHAKCPVVIVKQP 587
>BM143682 weakly similar to GP|12060514|dbj P0475H04.9 {Oryza sativa
(japonica cultivar-group)}, partial (17%)
Length = 421
Score = 151 bits (382), Expect = 1e-37
Identities = 76/122 (62%), Positives = 92/122 (75%), Gaps = 16/122 (13%)
Frame = +2
Query: 9 RRIMVAIDEGEESIYALTWCLKNLVFQNSKDHLILLYVKPPRVVYSAFDGT--------- 59
RR++VA+DEGEES+YAL+W L+N++FQNS+D LILLYVKPP VYS D T
Sbjct: 56 RRVLVAVDEGEESMYALSWSLRNVIFQNSRDTLILLYVKPPHAVYSPLDSTGRIDDPETP 235
Query: 60 -----GYLFSSDITATMEKYSQQVADCVLEKAKIVCNDVQN--VETRIENGDPRDVICQA 112
GYLFS DI+A +EKYSQ+VADCVLEKAK +C D+QN VETR+E+GDPRDVIC
Sbjct: 236 GWLISGYLFSPDISAAIEKYSQEVADCVLEKAKKLCKDLQNVMVETRVESGDPRDVICDM 415
Query: 113 VQ 114
Q
Sbjct: 416 SQ 421
>TC211612 similar to UP|Q8BUX8 (Q8BUX8) Mus musculus 16 days embryo head
cDNA, RIKEN full-length enriched library,
clone:C130083B15 product:EYES ABSENT HOMOLOG 4, full
insert sequence, partial (13%)
Length = 670
Score = 98.6 bits (244), Expect(2) = 9e-36
Identities = 46/55 (83%), Positives = 50/55 (90%)
Frame = +1
Query: 6 ENGRRIMVAIDEGEESIYALTWCLKNLVFQNSKDHLILLYVKPPRVVYSAFDGTG 60
E RRI+VA+DEGEES+YAL+WCLKNL FQNSKD LILLYVKPPRV YSAFDGTG
Sbjct: 88 EEERRILVAVDEGEESMYALSWCLKNLSFQNSKDTLILLYVKPPRVTYSAFDGTG 252
Score = 68.2 bits (165), Expect(2) = 9e-36
Identities = 41/105 (39%), Positives = 49/105 (46%), Gaps = 52/105 (49%)
Frame = +2
Query: 59 TGYLFSSDITATMEKYSQQVADCVLEKAKIVCNDVQN----------------------- 95
+GY F+SDITATME+YSQQVADCVLEKAK +C +++N
Sbjct: 353 SGYFFASDITATMERYSQQVADCVLEKAKKLCKNIENVRTYTYIIN*LL*S*FSYITYMM 532
Query: 96 -----------------------------VETRIENGDPRDVICQ 111
VETR+ENGD RDVICQ
Sbjct: 533 YVLSLFFFFFFFLLC*VSEYCQRVVWLIKVETRVENGDTRDVICQ 667
>TC215329 similar to UP|Q6T7D1 (Q6T7D1) Fiber protein Fb19 (Fragment),
partial (95%)
Length = 846
Score = 115 bits (289), Expect = 7e-27
Identities = 63/150 (42%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Frame = +1
Query: 11 IMVAIDEGEESIYALTWCLKNLVFQNSKDHLILLYVKPPRVVYSAFDGTGYLFSSDITAT 70
+++ ID+ E+S YAL W L + F + L+L++ +P F G G +++I
Sbjct: 184 VLIGIDDSEQSTYALNWALDHF-FPSPIFKLVLIHSRPTATSAVGFAGPG---AAEILPI 351
Query: 71 MEKYSQQVADCVLEKAKIVC--NDVQNVETRIENGDPRDVICQAVQKMGVDILVMGSHGY 128
++ +++A VLE AK +C V +V + GDPR+V+C AV K ILV+GSHGY
Sbjct: 352 VDSDLRKIAARVLETAKQLCFNKSVNDVTAEVVEGDPRNVLCDAVDKYRAAILVVGSHGY 531
Query: 129 GVIKRAFLGSVSNHCAQNVKCPVLIVKKPK 158
G IKRA LGSVS++CA + C V+IVKKPK
Sbjct: 532 GAIKRAVLGSVSDYCAHHAHCTVMIVKKPK 621
>TC215327 similar to UP|Q6T7D1 (Q6T7D1) Fiber protein Fb19 (Fragment),
partial (95%)
Length = 871
Score = 115 bits (289), Expect = 7e-27
Identities = 63/160 (39%), Positives = 95/160 (59%), Gaps = 2/160 (1%)
Frame = +1
Query: 1 MAGITENGRRIMVAIDEGEESIYALTWCLKNLVFQNSKDHLILLYVKPPRVVYSAFDGTG 60
MA + + +++ ID+ E+S YAL W L N F + L+L++ +P F G G
Sbjct: 49 MAASSSEKQVVVIGIDDSEQSTYALNWALDNF-FPSPIFKLVLIHSRPTATSAVGFAGPG 225
Query: 61 YLFSSDITATMEKYSQQVADCVLEKAKIVC--NDVQNVETRIENGDPRDVICQAVQKMGV 118
++++ ++ +++ VLE AK +C V +V + GDPR+V+C AV K
Sbjct: 226 ---AAEVLPIVDSDLRKIGARVLETAKQLCINKSVNDVTAEVVEGDPRNVLCDAVDKYRA 396
Query: 119 DILVMGSHGYGVIKRAFLGSVSNHCAQNVKCPVLIVKKPK 158
+LV+GSHGYG IKRA LGSVS++CA + C V+IVKKPK
Sbjct: 397 AMLVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPK 516
>TC215330 similar to UP|Q6T7D1 (Q6T7D1) Fiber protein Fb19 (Fragment),
partial (94%)
Length = 1021
Score = 108 bits (271), Expect = 9e-25
Identities = 60/158 (37%), Positives = 95/158 (59%), Gaps = 4/158 (2%)
Frame = +1
Query: 5 TENGRRIMVAIDEGEESIYALTWCLKNLVFQNS--KDHLILLYVKPPRVVYSAFDGTGYL 62
+E + +++ ID+ + S YAL W L +L+ + K + L+Y KP F G G
Sbjct: 4 SETKQVMVIGIDDSDFSTYALQWTLDHLLSPANVPKFKIFLVYAKPSVASAVGFVGPG-- 177
Query: 63 FSSDITATMEKYSQQVADCVLEKAKIVCN--DVQNVETRIENGDPRDVICQAVQKMGVDI 120
++++ +E ++ A + E+A +C V +V + GDPR+V+C+AV+K +
Sbjct: 178 -AAEVLPVVEADLRKTAAKITERATELCKKKSVNDVAVEVLEGDPRNVLCEAVEKHQASM 354
Query: 121 LVMGSHGYGVIKRAFLGSVSNHCAQNVKCPVLIVKKPK 158
LV+GSHGYG +KRA LGSVS++CA + C V+IVKKPK
Sbjct: 355 LVVGSHGYGTLKRAVLGSVSDYCAHHAHCTVMIVKKPK 468
>TC207729
Length = 770
Score = 104 bits (260), Expect = 2e-23
Identities = 63/172 (36%), Positives = 99/172 (56%), Gaps = 16/172 (9%)
Frame = +3
Query: 2 AGITENGRR--IMVAIDEGEESIYALTWCLKNL---------VFQNSKDHLILLYVKPPR 50
AG+ ++ R +MVAIDE E S YAL W L NL D ++ L P+
Sbjct: 66 AGVVQSRMRMKVMVAIDESEGSFYALKWALDNLFTTMATVGEASSPENDGMVFLVHVEPK 245
Query: 51 V---VYSAFDGTGYLFSSDITA-TMEKYSQQVADCVLEKAKIVCND-VQNVETRIENGDP 105
V VY G + + + +++K Q+ + +L +A +C+D + E+ I +GD
Sbjct: 246 VHNYVYPIGPGGAAFYPATVVVDSVKKAQQERSAAILSRALKMCHDKLVKGESIILHGDA 425
Query: 106 RDVICQAVQKMGVDILVMGSHGYGVIKRAFLGSVSNHCAQNVKCPVLIVKKP 157
R++IC+A ++M +++LV+GS G G +KR FLGSVS++CA + K P+LIVK P
Sbjct: 426 REMICEAAEQMQINLLVLGSRGLGTLKRTFLGSVSDYCAHHAKTPILIVKPP 581
>CK605854
Length = 482
Score = 92.8 bits (229), Expect = 7e-20
Identities = 55/150 (36%), Positives = 76/150 (50%), Gaps = 2/150 (1%)
Frame = -1
Query: 11 IMVAIDEGEESIYALTWCLKNLVFQNSKDHLILLYVKPPRVVYSAFDGTGYLFSSDITAT 70
+++ ID+ E+S YAL W L + F + L+L++ +P
Sbjct: 407 VLIGIDDSEQSTYALNWALDHF-FPSPIFKLVLIHSRPA--------------------- 294
Query: 71 MEKYSQQVADCVLEKAKIVC--NDVQNVETRIENGDPRDVICQAVQKMGVDILVMGSHGY 128
AK +C V +V + GDPR+V+C AV K ILV+GSHGY
Sbjct: 293 ---------------AKQLCFNKSVNDVTAEVVEGDPRNVLCDAVDKYRAAILVVGSHGY 159
Query: 129 GVIKRAFLGSVSNHCAQNVKCPVLIVKKPK 158
G IKRA LGSVS++CA + C V+IVKKPK
Sbjct: 158 GAIKRAVLGSVSDYCAHHAHCTVMIVKKPK 69
>TC221051 similar to UP|Q9SWV2 (Q9SWV2) ER6 protein (Fragment), partial (57%)
Length = 666
Score = 90.5 bits (223), Expect = 3e-19
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Frame = +1
Query: 56 FDGTGYLFSSDITATMEKYSQQVADCVLEKAKIVCND---VQNVETRIENGDPRDVICQA 112
F G L TA +E + +++ + VL+ A +C++ V T + GDP++ IC+A
Sbjct: 10 FGGPSDLEVPAFTAAIEAHQKRITNAVLDHALGICSEFNLTSKVRTHVLVGDPKEKICEA 189
Query: 113 VQKMGVDILVMGSHGYGVIKRAFLGSVSNHCAQNVKCPVLIVKK 156
VQ + D+LVMGS +G IKR FLGSVSN+CA + CPV+I+K+
Sbjct: 190 VQDLNADVLVMGSRAFGPIKRMFLGSVSNYCAHHSPCPVIIIKE 321
>BM892835
Length = 421
Score = 85.1 bits (209), Expect = 1e-17
Identities = 38/55 (69%), Positives = 45/55 (81%)
Frame = +1
Query: 5 TENGRRIMVAIDEGEESIYALTWCLKNLVFQNSKDHLILLYVKPPRVVYSAFDGT 59
T N RR++VA+DEGEES+YAL+W LKN++FQNS D LILLYVKPP VYS D T
Sbjct: 22 TRNERRVLVAVDEGEESMYALSWSLKNIIFQNSSDTLILLYVKPPHAVYSPLDST 186
Score = 34.7 bits (78), Expect = 0.021
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 60 GYLFSSDITATMEKYSQQVA 79
GYLFSSD++A +EKY Q+VA
Sbjct: 362 GYLFSSDVSAAIEKYGQEVA 421
>BG650653
Length = 321
Score = 83.2 bits (204), Expect = 5e-17
Identities = 36/52 (69%), Positives = 45/52 (86%)
Frame = +2
Query: 9 RRIMVAIDEGEESIYALTWCLKNLVFQNSKDHLILLYVKPPRVVYSAFDGTG 60
RR++VA+DEGEES+YAL+W L+N++FQNS+D LILLYVKPP VYS D TG
Sbjct: 92 RRVLVAVDEGEESMYALSWSLRNVIFQNSRDTLILLYVKPPHAVYSPLDSTG 247
>TC206542 similar to UP|Q8S3R7 (Q8S3R7) Ethylene-responsive protein-like,
partial (97%)
Length = 943
Score = 71.2 bits (173), Expect = 2e-13
Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 12/175 (6%)
Frame = +1
Query: 2 AGITENGRRIMVAIDEGEESIY---------ALTWCLKNLVFQN-SKDHLILLYVKPPRV 51
+ + E R+MVA++E Y A W + +V N S +L+ L+V+ P
Sbjct: 34 SAMAEEVTRVMVAVNESSMKGYPHPSISSKGAFEWTINKIVRNNVSAFNLLFLHVQVPDE 213
Query: 52 VYSAFDGTGYLFSS-DITATMEKYSQQVADCVLEKAKIVCNDVQNV-ETRIENGDPRDVI 109
F+ +++S D M + + +LE C+++ V + I GDP++VI
Sbjct: 214 --DGFNDMDSIYASPDDFKNMNQRDRIRGVHLLEYFVNRCHEIGVVCQAWIMKGDPKEVI 387
Query: 110 CQAVQKMGVDILVMGSHGYGVIKRAFLGSVSNHCAQNVKCPVLIVKKPKSTTGGD 164
C V+++ D+LV+GS G G ++ F+G+VS C ++ +CPV+ +K+ T D
Sbjct: 388 CHEVKRLRPDLLVVGSRGLGPFQKVFVGTVSEFCWKHAECPVISIKRKPDETPQD 552
>TC215797 weakly similar to GB|AAL49942.1|17979251|AY070476
AT3g53990/F5K20_290 {Arabidopsis thaliana;} , partial
(97%)
Length = 913
Score = 70.9 bits (172), Expect = 3e-13
Identities = 53/162 (32%), Positives = 81/162 (49%), Gaps = 9/162 (5%)
Frame = +2
Query: 9 RRIMVAIDEGEESIYALTWCLKNLVFQNSKDHLILLYVKPP------RVVYSAFDGTGYL 62
R+I VA+D + S AL W + NL+ ++ D L +++ KP +++S G+ +
Sbjct: 104 RKIGVALDFSKGSKIALKWAIDNLI--SNGDTLYIVHTKPSGGSESGNLLWST-TGSPLI 274
Query: 63 FSSDITA--TMEKYSQQVADCVLEKAKIVCNDVQ-NVETRIENGDPRDVICQAVQKMGVD 119
S+ M Y VL+ Q NV ++ GD R+ I +AV + +D
Sbjct: 275 PLSEFREKEVMRHYEVDTDAEVLDLLDTASRQKQVNVVAKLYWGDAREKIVEAVGDLKLD 454
Query: 120 ILVMGSHGYGVIKRAFLGSVSNHCAQNVKCPVLIVKKPKSTT 161
LVMGS G G I+R LGSV+N+ N CP+ IVK +T
Sbjct: 455 SLVMGSRGLGAIQRVLLGSVTNYVTANASCPITIVKDSAPST 580
>TC225833 similar to GB|AAL49942.1|17979251|AY070476 AT3g53990/F5K20_290
{Arabidopsis thaliana;} , partial (98%)
Length = 930
Score = 70.9 bits (172), Expect = 3e-13
Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 8/161 (4%)
Frame = +1
Query: 9 RRIMVAIDEGEESIYALTWCLKNLVFQNSKDHLILLYVKPPRVVYS-----AFDGTGYLF 63
R I VA+D + S AL W +NL + D + ++++ P + S A G+ +
Sbjct: 154 RTIGVALDFSKSSKNALKWAFENLA--DKGDTIYVIHINPNSLDESRNKLWAKSGSPLIP 327
Query: 64 SSDITAT--MEKYSQQVADCVLEKAKIVCNDVQ-NVETRIENGDPRDVICQAVQKMGVDI 120
+ M+KY ++ VL+ + ++ T+I GD R+ + A++ + +D
Sbjct: 328 LVEFREPEIMKKYDVEIDIEVLDMLDTASRQKEIHIVTKIYWGDAREKLLDAIEDLKLDS 507
Query: 121 LVMGSHGYGVIKRAFLGSVSNHCAQNVKCPVLIVKKPKSTT 161
LVMGS G I+R LGSVSN N CPV IVK+P S++
Sbjct: 508 LVMGSRGLSTIQRIILGSVSNFVMTNAPCPVTIVKEPPSSS 630
>AW761238
Length = 448
Score = 66.2 bits (160), Expect = 7e-12
Identities = 45/134 (33%), Positives = 69/134 (50%), Gaps = 2/134 (1%)
Frame = +2
Query: 11 IMVAIDEGEESIYALTWCLKNLVFQNSKDHLILLYVKPPRVVYSAFDGTGYLFSSDITAT 70
+++ ID+ E+S Y+L W L N F + L+L++ +P G SD+
Sbjct: 29 VVIGIDDSEQSTYSLNWTLDNF-FPSPIFKLVLIHSRPTDSSAVGLAGP----DSDL--- 184
Query: 71 MEKYSQQVADCVLEKAKIVC--NDVQNVETRIENGDPRDVICQAVQKMGVDILVMGSHGY 128
+++ VLE AK +C V +V + GDP +V C AV K +LV+GSHGY
Sbjct: 185 -----REIGARVLETAKQLCINKSVNDVTA*VVEGDPINVHCDAVDKYRAAVLVVGSHGY 349
Query: 129 GVIKRAFLGSVSNH 142
G I RA + SV ++
Sbjct: 350 GAIIRAAVRSVRDY 391
>TC224740
Length = 694
Score = 65.5 bits (158), Expect = 1e-11
Identities = 30/58 (51%), Positives = 39/58 (66%)
Frame = +2
Query: 103 GDPRDVICQAVQKMGVDILVMGSHGYGVIKRAFLGSVSNHCAQNVKCPVLIVKKPKST 160
GDPR+ +C AV+ + +D LV+GS G G IKR LGSVS H N CPV +VK +S+
Sbjct: 188 GDPREKLCNAVEDLHLDSLVVGSRGLGPIKRVLLGSVSKHVMTNASCPVTVVKGKQSS 361
>TC225830 similar to GB|AAL49942.1|17979251|AY070476 AT3g53990/F5K20_290
{Arabidopsis thaliana;} , partial (98%)
Length = 878
Score = 65.1 bits (157), Expect = 1e-11
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Frame = +1
Query: 9 RRIMVAIDEGEESIYALTWCLKNLVFQNSKDHLILLYVKPPRVVYS-----AFDGTGYLF 63
R I VA+D + S AL W L+NL + D + ++++ + S A G+ +
Sbjct: 118 RTIGVALDFSKSSKNALKWALENLA--DKGDTIYVIHINSNSLDESRNKLWAESGSPLIP 291
Query: 64 SSDITAT--MEKYSQQVADCVLEKAKIVCNDVQ-NVETRIENGDPRDVICQAVQKMGVDI 120
+ M+KY Q+ VL+ + ++ T+I GD R+ + A++ + +D
Sbjct: 292 LVEFREPEIMKKYDVQIDIEVLDLLDTASRQKEIHIVTKIYWGDAREKLLDAIEDLKLDS 471
Query: 121 LVMGSHGYGVIKRAFLGSVSNHCAQNVKCPVLIVKKPKSTT 161
LVMGS G I+R LGSVSN + CPV IVK+ T
Sbjct: 472 LVMGSRGLSTIQRIILGSVSNFVMTHASCPVTIVKETSKET 594
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.320 0.137 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,634,989
Number of Sequences: 63676
Number of extensions: 74550
Number of successful extensions: 426
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of query: 165
length of database: 12,639,632
effective HSP length: 90
effective length of query: 75
effective length of database: 6,908,792
effective search space: 518159400
effective search space used: 518159400
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Medicago: description of AC149080.7