BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149038.15 - phase: 0
(213 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC224703 similar to UP|RHRE_PEA (Q9S8P4) Rhicadhesin receptor pr... 328 1e-90
TC227305 similar to GB|AAB51752.1|1934730|ATU95036 germin-like p... 287 2e-78
AW348512 similar to SP|Q9S8P4|RHRE Rhicadhesin receptor precurso... 242 1e-64
AW349074 similar to PIR|T07004|T07 germin homolog - potato, part... 237 3e-63
TC224786 similar to GB|AAP12867.1|30017267|BT006218 At3g52820 {A... 208 1e-54
AW233823 weakly similar to SP|Q9S8P4|RHRE Rhicadhesin receptor p... 191 3e-49
TC206636 homologue to UP|Q9SC39 (Q9SC39) Germin-like protein (Fr... 184 3e-47
TC206635 similar to UP|Q9SC39 (Q9SC39) Germin-like protein (Frag... 183 4e-47
TC221249 weakly similar to UP|GL32_ARATH (Q9SR72) Germin-like pr... 172 1e-43
TC231794 similar to UP|Q9SC39 (Q9SC39) Germin-like protein (Frag... 166 1e-41
TC211313 weakly similar to UP|Q9SC38 (Q9SC38) Germin-like protei... 148 2e-36
TC227307 similar to GB|AAB51752.1|1934730|ATU95036 germin-like p... 147 5e-36
TC225519 similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protein, comp... 143 7e-35
TC214768 similar to UP|Q9AR81 (Q9AR81) Germin-like protein precu... 142 1e-34
TC225520 similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protein, comp... 140 6e-34
TC214055 weakly similar to UP|Q9AR81 (Q9AR81) Germin-like protei... 138 2e-33
TC227306 similar to GB|AAB51752.1|1934730|ATU95036 germin-like p... 135 1e-32
TC211239 similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protein, comp... 134 3e-32
TC214056 similar to UP|Q9AR81 (Q9AR81) Germin-like protein precu... 134 3e-32
TC215814 similar to UP|Q9AR81 (Q9AR81) Germin-like protein precu... 133 7e-32
>TC224703 similar to UP|RHRE_PEA (Q9S8P4) Rhicadhesin receptor precursor
(Germin-like protein), partial (91%)
Length = 1092
Score = 328 bits (841), Expect = 1e-90
Identities = 164/209 (78%), Positives = 185/209 (88%)
Frame = +1
Query: 5 AVLLLLVLTTTVTADPDNLQDLCVADLASAILVNGFTCKPASNVTAADFSTNVLAKPGAT 64
AV L LVL T +DPD LQDLCVADLASA+ VNGFTCK A+ V A+DF +++LAKPGAT
Sbjct: 154 AVTLALVLATVSASDPDPLQDLCVADLASAVKVNGFTCKDAAKVNASDFFSDILAKPGAT 333
Query: 65 NNTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRATEIVYVLEGQLDVGF 124
NNT+GSLVT ANVQKIPGLNTLGVSL+RIDYA GG+NPPHTHPRATE+V+VLEG LDVGF
Sbjct: 334 NNTYGSLVTGANVQKIPGLNTLGVSLSRIDYAPGGINPPHTHPRATEVVFVLEGTLDVGF 513
Query: 125 ITTANVLISKTIVKGETFVFPKGLVHFQKNSGYVPAAVIAGFNSQLQGTVNIPLTLFAST 184
ITTANVLISK+I KGE FVFPKGLVHFQKN+G A+VIA FNSQL GT +I LTLFA+T
Sbjct: 514 ITTANVLISKSISKGEIFVFPKGLVHFQKNNGKEQASVIAAFNSQLPGTQSIALTLFAAT 693
Query: 185 PPVPDNILTQAFQIGTKEVQKIKSRLAPK 213
PPVPDN+LT+AFQ+GTKEV+KIKSRLAPK
Sbjct: 694 PPVPDNVLTKAFQVGTKEVEKIKSRLAPK 780
>TC227305 similar to GB|AAB51752.1|1934730|ATU95036 germin-like protein
{Arabidopsis thaliana;} , partial (96%)
Length = 1034
Score = 287 bits (735), Expect = 2e-78
Identities = 145/210 (69%), Positives = 166/210 (79%)
Frame = +3
Query: 4 IAVLLLLVLTTTVTADPDNLQDLCVADLASAILVNGFTCKPASNVTAADFSTNVLAKPGA 63
I V ++ T +DPD LQDLCVA +S + VNGF CK SNVT ADF LAKPGA
Sbjct: 132 ILVFFCCAISFTFASDPDTLQDLCVALPSSGVKVNGFACKAESNVTEADFFFAGLAKPGA 311
Query: 64 TNNTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRATEIVYVLEGQLDVG 123
TNNT GS+VT ANV KIPGLNTLGVS +RIDY GGLNPPHTHPRATEIV+VL+GQLDVG
Sbjct: 312 TNNTLGSVVTAANVDKIPGLNTLGVSFSRIDYKAGGLNPPHTHPRATEIVFVLDGQLDVG 491
Query: 124 FITTANVLISKTIVKGETFVFPKGLVHFQKNSGYVPAAVIAGFNSQLQGTVNIPLTLFAS 183
FITTAN LISK+I KGE FVFPKGLVH+QKN+G PA+V++ FNSQL GTV+I LF S
Sbjct: 492 FITTANKLISKSIKKGEIFVFPKGLVHYQKNNGDKPASVLSAFNSQLPGTVSIAAALFTS 671
Query: 184 TPPVPDNILTQAFQIGTKEVQKIKSRLAPK 213
TP VPD++L QAFQI TK+V IK++LAPK
Sbjct: 672 TPTVPDDVLAQAFQIDTKKVDDIKAKLAPK 761
>AW348512 similar to SP|Q9S8P4|RHRE Rhicadhesin receptor precursor
(Germin-like protein). [Garden pea] {Pisum sativum},
partial (72%)
Length = 604
Score = 242 bits (617), Expect = 1e-64
Identities = 122/159 (76%), Positives = 139/159 (86%)
Frame = -3
Query: 55 TNVLAKPGATNNTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRATEIVY 114
+++LAKPGATN T+GS VT A VQKIPGLNTLGVSL+RIDYA GG+NPPHTHPRATE+V+
Sbjct: 602 SDILAKPGATNXTYGSXVTGAXVQKIPGLNTLGVSLSRIDYAPGGINPPHTHPRATEVVF 423
Query: 115 VLEGQLDVGFITTANVLISKTIVKGETFVFPKGLVHFQKNSGYVPAAVIAGFNSQLQGTV 174
VLEG LDVGFITTANVLISK+I KGE FVFPKGLV FQ + A+VIA F SQL GT
Sbjct: 422 VLEGTLDVGFITTANVLISKSISKGEIFVFPKGLVLFQNINEKEQASVIAAFXSQLHGTQ 243
Query: 175 NIPLTLFASTPPVPDNILTQAFQIGTKEVQKIKSRLAPK 213
+I LTLFA+TPPVPDN+LT+AFQ+GTKEV+KIKSRLAPK
Sbjct: 242 SIALTLFAATPPVPDNVLTKAFQVGTKEVEKIKSRLAPK 126
>AW349074 similar to PIR|T07004|T07 germin homolog - potato, partial (70%)
Length = 597
Score = 237 bits (605), Expect = 3e-63
Identities = 118/158 (74%), Positives = 134/158 (84%)
Frame = -3
Query: 56 NVLAKPGATNNTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRATEIVYV 115
N+LAKPGATNNTFG LVT ANV K+PGLNT GV L+RIDYA GG+NP HTH RATE+V+V
Sbjct: 595 NILAKPGATNNTFGXLVTGANVHKVPGLNTXGVXLSRIDYAXGGINPLHTHSRATELVFV 416
Query: 116 LEGQLDVGFITTANVLISKTIVKGETFVFPKGLVHFQKNSGYVPAAVIAGFNSQLQGTVN 175
LEGQL V FITT NVLISK+I KG+ FVFPKGL+HFQKN+ VPAAVI+ FNSQL GT +
Sbjct: 415 LEGQLYVXFITTCNVLISKSINKGDIFVFPKGLLHFQKNNAKVPAAVISAFNSQLPGTQS 236
Query: 176 IPLTLFASTPPVPDNILTQAFQIGTKEVQKIKSRLAPK 213
TLFA+TP VPD++LTQ FQ+GTKEVQKIKSR APK
Sbjct: 235 TATTLFAATPSVPDHVLTQTFQVGTKEVQKIKSRPAPK 122
>TC224786 similar to GB|AAP12867.1|30017267|BT006218 At3g52820 {Arabidopsis
thaliana;} , partial (82%)
Length = 1398
Score = 208 bits (530), Expect = 1e-54
Identities = 103/144 (71%), Positives = 120/144 (82%)
Frame = -1
Query: 61 PGATNNTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRATEIVYVLEGQL 120
P N + + + +KIPGLNTLGVSL+RIDYA GG+NPPHTHPRATE+V+VLEG L
Sbjct: 432 PNLVPNRHEASCRIRHEEKIPGLNTLGVSLSRIDYAPGGINPPHTHPRATEVVFVLEGTL 253
Query: 121 DVGFITTANVLISKTIVKGETFVFPKGLVHFQKNSGYVPAAVIAGFNSQLQGTVNIPLTL 180
VGFITTANVLISK+I KGE FVFPKGLVHFQKN+G A+VIA FNSQL GT +I LTL
Sbjct: 252 YVGFITTANVLISKSISKGEIFVFPKGLVHFQKNNGKEQASVIAAFNSQLPGTQSIALTL 73
Query: 181 FASTPPVPDNILTQAFQIGTKEVQ 204
FA+TPPVPDN+LT+AFQ+GTKEV+
Sbjct: 72 FAATPPVPDNVLTKAFQVGTKEVE 1
>AW233823 weakly similar to SP|Q9S8P4|RHRE Rhicadhesin receptor precursor
(Germin-like protein). [Garden pea] {Pisum sativum},
partial (64%)
Length = 454
Score = 191 bits (484), Expect = 3e-49
Identities = 99/151 (65%), Positives = 115/151 (75%)
Frame = +2
Query: 6 VLLLLVLTTTVTADPDNLQDLCVADLASAILVNGFTCKPASNVTAADFSTNVLAKPGATN 65
V L LVL T +DPD LQDLCVADLASA+ VNGFTCK A+ V A+DF ++LAKPGATN
Sbjct: 2 VTLALVLATVSASDPDPLQDLCVADLASAVKVNGFTCKDAAKVNASDFF*DILAKPGATN 181
Query: 66 NTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRATEIVYVLEGQLDVGFI 125
NT+G LVT ANVQKIP LNTLGVSL R+DYA G+NPPHTHPR T++ +VLE L V I
Sbjct: 182 NTYGCLVTGANVQKIPRLNTLGVSL*RMDYAPSGINPPHTHPRTTKVRWVLERTLXVRCI 361
Query: 126 TTANVLISKTIVKGETFVFPKGLVHFQKNSG 156
TT N LISK I K E + PKG H++KN+G
Sbjct: 362 TTGNGLISKXINKDEICILPKGEGHWRKNNG 454
>TC206636 homologue to UP|Q9SC39 (Q9SC39) Germin-like protein (Fragment),
complete
Length = 931
Score = 184 bits (466), Expect = 3e-47
Identities = 105/205 (51%), Positives = 131/205 (63%), Gaps = 7/205 (3%)
Frame = +2
Query: 1 MKIIAVLL-LLVLTTTVTA--DPDNLQDLCVADLAS-AILVNGFTCKPASNVTAADFSTN 56
MK++ L+ +L LT+TV + DP LQD CVA + VNG CK V A DF +
Sbjct: 59 MKVVYFLVAILALTSTVVSAYDPSPLQDFCVAAKEKDGVFVNGKFCKDPKLVKAEDFFKH 238
Query: 57 VLAKPGATNNTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRATEIVYVL 116
V +P T N GS VT V ++PGLNTLG+SLARIDYA GLNPPHTHPR TEI+ VL
Sbjct: 239 V--EPANTANPLGSQVTPVFVDQLPGLNTLGISLARIDYAPKGLNPPHTHPRGTEILIVL 412
Query: 117 EGQLDVGFITT---ANVLISKTIVKGETFVFPKGLVHFQKNSGYVPAAVIAGFNSQLQGT 173
EG L VGF+T+ N L +K + KG+ FVFP GL+HFQ N GY A IAG +SQ G
Sbjct: 413 EGTLYVGFVTSNQDGNRLFTKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGA 592
Query: 174 VNIPLTLFASTPPVPDNILTQAFQI 198
+ I LF + PP+ +LT+AFQ+
Sbjct: 593 ITIANALFKANPPISSEVLTKAFQV 667
>TC206635 similar to UP|Q9SC39 (Q9SC39) Germin-like protein (Fragment),
partial (95%)
Length = 897
Score = 183 bits (465), Expect = 4e-47
Identities = 104/205 (50%), Positives = 133/205 (64%), Gaps = 7/205 (3%)
Frame = +3
Query: 1 MKIIAVLL-LLVLTTTVTA--DPDNLQDLCVADLAS-AILVNGFTCKPASNVTAADFSTN 56
MK++ +L+ LL LT+TV + DP LQD CVA + VNG CK V A DF +
Sbjct: 66 MKVVYLLVALLALTSTVVSAYDPSPLQDFCVAAKEKDGVFVNGKFCKDPKLVKAEDFFRH 245
Query: 57 VLAKPGATNNTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRATEIVYVL 116
V +PG T+N GS VT V ++PGLNTLG++LARID+A GLN PHTHPR TEI+ VL
Sbjct: 246 V--EPGKTDNPLGSNVTQVFVDQLPGLNTLGIALARIDFAPKGLNAPHTHPRGTEILIVL 419
Query: 117 EGQLDVGFITT---ANVLISKTIVKGETFVFPKGLVHFQKNSGYVPAAVIAGFNSQLQGT 173
EG L VGF+T+ N L +K + KG+ FVFP GL+HFQ N GY A IAG +SQ G
Sbjct: 420 EGTLYVGFVTSNQDGNRLFTKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGA 599
Query: 174 VNIPLTLFASTPPVPDNILTQAFQI 198
+ I LF + PP+ +LT+AFQ+
Sbjct: 600 ITIANALFKANPPISSEVLTKAFQV 674
>TC221249 weakly similar to UP|GL32_ARATH (Q9SR72) Germin-like protein
subfamily 3 member 2 precursor, partial (58%)
Length = 1000
Score = 172 bits (435), Expect = 1e-43
Identities = 92/212 (43%), Positives = 130/212 (60%), Gaps = 3/212 (1%)
Frame = +2
Query: 4 IAVLL--LLVLTTTVTADPDNLQDLCVADLASAILVNGFTCKPASNVTAADFSTNVLAKP 61
+AVLL LL + + +DPD + D C+A N F+CK +S T DF+ + + P
Sbjct: 98 VAVLLVVLLFIIAALASDPDPVMDFCIAKSPD----NSFSCKNSSTATVEDFTYSGIKSP 265
Query: 62 GATNNT-FGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRATEIVYVLEGQL 120
G T F S+ +NV PGLNTLGVS R D+ VGG+N PH HPRATE+ +VLEG++
Sbjct: 266 GNFKQTGFSSMAVNSNV--FPGLNTLGVSFVRADFGVGGVNVPHFHPRATEVAFVLEGKI 439
Query: 121 DVGFITTANVLISKTIVKGETFVFPKGLVHFQKNSGYVPAAVIAGFNSQLQGTVNIPLTL 180
GF+ T N + +K + KGE VFP+GLVHFQ N G PA ++ F+SQ G + IP +
Sbjct: 440 YSGFVDTNNKVFAKVLEKGEVMVFPRGLVHFQMNVGDRPATILGSFDSQNPGLMRIPNAV 619
Query: 181 FASTPPVPDNILTQAFQIGTKEVQKIKSRLAP 212
F S + + +L +AF + +KE+ K+K R +P
Sbjct: 620 FGS--DIKEELLEKAFGLSSKELSKLKKRFSP 709
>TC231794 similar to UP|Q9SC39 (Q9SC39) Germin-like protein (Fragment),
partial (95%)
Length = 757
Score = 166 bits (419), Expect = 1e-41
Identities = 90/190 (47%), Positives = 119/190 (62%), Gaps = 4/190 (2%)
Frame = +3
Query: 24 QDLCVADLAS-AILVNGFTCKPASNVTAADFSTNVLAKPGATNNTFGSLVTLANVQKIPG 82
QD CVA + VNG CK V DF +V +PG T+N + VT +V ++PG
Sbjct: 12 QDFCVAAKEKDGVFVNGKFCKDPKLVKPEDFFLHV--EPGNTDNPNNAQVTPVSVDQLPG 185
Query: 83 LNTLGVSLARIDYAVGGLNPPHTHPRATEIVYVLEGQLDVGFITT---ANVLISKTIVKG 139
LNTLG+SLARI++A G+NPPHTHPRA+EI+ VLEG L VGF+T+ N L +K + KG
Sbjct: 186 LNTLGISLARINFAPKGINPPHTHPRASEILIVLEGTLYVGFVTSNQDGNRLFTKVLNKG 365
Query: 140 ETFVFPKGLVHFQKNSGYVPAAVIAGFNSQLQGTVNIPLTLFASTPPVPDNILTQAFQIG 199
+ FVFP GL+HFQ N GY A IA SQ GT+ I LF + PP+ +LT+AFQ+
Sbjct: 366 DVFVFPIGLIHFQLNVGYGNAVAIAALGSQNAGTITIANALFKANPPISPEVLTKAFQVD 545
Query: 200 TKEVQKIKSR 209
K + + +
Sbjct: 546 QKLIDDLXKK 575
>TC211313 weakly similar to UP|Q9SC38 (Q9SC38) Germin-like protein
(Fragment), partial (88%)
Length = 737
Score = 148 bits (373), Expect = 2e-36
Identities = 82/171 (47%), Positives = 108/171 (62%), Gaps = 3/171 (1%)
Frame = +2
Query: 42 CKPASNVTAADFSTNVLAKPGATNNTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLN 101
CK +V A DF V +PG +N GS VT V ++PGLNTLG+SLARIDY GLN
Sbjct: 8 CKEPKDVKAEDFYKEV--EPGNPSNQLGSAVTPVFVDQLPGLNTLGLSLARIDYESMGLN 181
Query: 102 PPHTHPRATEIVYVLEGQLDVGFITT---ANVLISKTIVKGETFVFPKGLVHFQKNSGYV 158
PPH HPRATEI+ VLEG L VGF T+ N L SK + KG+ FV P GL+ FQ N G
Sbjct: 182 PPHIHPRATEIIIVLEGILLVGFATSNQDGNRLFSKMLKKGDVFVSPMGLIQFQYNPGRG 361
Query: 159 PAAVIAGFNSQLQGTVNIPLTLFASTPPVPDNILTQAFQIGTKEVQKIKSR 209
A I+ F+S GTV + +F S P + +ILT++FQ+ K + +++++
Sbjct: 362 RAVSISAFSSPNPGTVTVANAVFRSNPRISTDILTKSFQVDKKVIDELQNQ 514
>TC227307 similar to GB|AAB51752.1|1934730|ATU95036 germin-like protein
{Arabidopsis thaliana;} , partial (50%)
Length = 616
Score = 147 bits (370), Expect = 5e-36
Identities = 74/104 (71%), Positives = 87/104 (83%)
Frame = +3
Query: 110 TEIVYVLEGQLDVGFITTANVLISKTIVKGETFVFPKGLVHFQKNSGYVPAAVIAGFNSQ 169
TEIV+VL+GQLDVGFITTAN LISK+I KGE FVFPKGLVH+QKN+G PA+V++ FNSQ
Sbjct: 3 TEIVFVLDGQLDVGFITTANKLISKSINKGEIFVFPKGLVHYQKNNGDKPASVLSAFNSQ 182
Query: 170 LQGTVNIPLTLFASTPPVPDNILTQAFQIGTKEVQKIKSRLAPK 213
L GTV+I TLF STP VP N+L+QAFQI K V IK++LAPK
Sbjct: 183 LPGTVSIAATLFTSTPTVPHNVLSQAFQIDAKLVDDIKAKLAPK 314
>TC225519 similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protein, complete
Length = 961
Score = 143 bits (360), Expect = 7e-35
Identities = 85/209 (40%), Positives = 120/209 (56%)
Frame = +2
Query: 1 MKIIAVLLLLVLTTTVTADPDNLQDLCVADLASAILVNGFTCKPASNVTAADFSTNVLAK 60
MK+I VL L L + + N D CVADL +G+ CKP + VT DF +
Sbjct: 32 MKMIHVLFLFALVSFTSHASVN--DFCVADLKGPDSPSGYQCKPPNTVTVDDFVFSGFVA 205
Query: 61 PGATNNTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRATEIVYVLEGQL 120
G T NTF + +T A V PG+N LGVS+AR+D A GG P HTHP ATE++ ++EGQ+
Sbjct: 206 -GNTTNTFNAALTSAFVTDFPGVNGLGVSVARLDIAKGGSIPMHTHPAATELLIMVEGQI 382
Query: 121 DVGFITTANVLISKTIVKGETFVFPKGLVHFQKNSGYVPAAVIAGFNSQLQGTVNIPLTL 180
GF+ T L +KT+ G+ VFP+G +HFQ NSG A F+S G + L L
Sbjct: 383 TAGFM-TPTALYTKTLKPGDIMVFPQGQLHFQVNSGNGKATAFLAFSSANPGAQLLDLLL 559
Query: 181 FASTPPVPDNILTQAFQIGTKEVQKIKSR 209
F +T +P +++ Q + +V+K+K+R
Sbjct: 560 FGNT--LPSDLVAQTTFLDVAQVKKVKAR 640
>TC214768 similar to UP|Q9AR81 (Q9AR81) Germin-like protein precursor,
partial (95%)
Length = 953
Score = 142 bits (358), Expect = 1e-34
Identities = 79/205 (38%), Positives = 121/205 (58%)
Frame = +1
Query: 6 VLLLLVLTTTVTADPDNLQDLCVADLASAILVNGFTCKPASNVTAADFSTNVLAKPGATN 65
+L++ ++ + ++ ++ D CVAD A I G++CK S VTA DF+ + L G T+
Sbjct: 43 ILIISLIFSLLSFSHASVLDFCVADYAGPIGPAGYSCKKPSKVTADDFAYSGLGIAGNTS 222
Query: 66 NTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRATEIVYVLEGQLDVGFI 125
N + VT A + GLN LG+S AR+D A GG+ P HTHP A+E++ V+EG + GFI
Sbjct: 223 NIIKAAVTPAFDAQFAGLNGLGISAARLDLAAGGVIPLHTHPGASELLVVIEGSILAGFI 402
Query: 126 TTANVLISKTIVKGETFVFPKGLVHFQKNSGYVPAAVIAGFNSQLQGTVNIPLTLFASTP 185
++AN++ KT+ KG+ FP+GL+HFQ N+G A I F+S G + LF S+
Sbjct: 403 SSANIVYLKTLKKGDVMAFPQGLLHFQINAGKSSALAIVSFSSSNPGLQILDFALFKSSF 582
Query: 186 PVPDNILTQAFQIGTKEVQKIKSRL 210
P P ++ Q + V+K+K L
Sbjct: 583 PTP--LIVQTTFLDAALVKKLKGVL 651
>TC225520 similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protein, complete
Length = 834
Score = 140 bits (352), Expect = 6e-34
Identities = 84/209 (40%), Positives = 118/209 (56%)
Frame = +1
Query: 1 MKIIAVLLLLVLTTTVTADPDNLQDLCVADLASAILVNGFTCKPASNVTAADFSTNVLAK 60
MK+I L L L + + N D CVADL +G+ CKP + VT DF +
Sbjct: 28 MKMIHFLFLFALVSFTSHASVN--DFCVADLKGPDSPSGYQCKPPNTVTVDDFVFSGFVA 201
Query: 61 PGATNNTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRATEIVYVLEGQL 120
G T NTF + +T A V PG+N LGVS AR+D A GG P HTHP ATE++ ++EGQ+
Sbjct: 202 -GNTTNTFNAALTSAFVTDFPGVNGLGVSAARLDIAKGGSIPMHTHPAATELLIMVEGQI 378
Query: 121 DVGFITTANVLISKTIVKGETFVFPKGLVHFQKNSGYVPAAVIAGFNSQLQGTVNIPLTL 180
GF+ T L +KT+ G+ VFP+G +HFQ NSG A F+S G + L L
Sbjct: 379 TAGFM-TPTALYTKTLKPGDIMVFPQGQLHFQVNSGNGKATAFLAFSSANPGAQLLDLLL 555
Query: 181 FASTPPVPDNILTQAFQIGTKEVQKIKSR 209
F +T +P +++ Q + +V+K+K+R
Sbjct: 556 FGNT--LPSDLVAQTTFLDVAQVKKLKAR 636
>TC214055 weakly similar to UP|Q9AR81 (Q9AR81) Germin-like protein precursor,
complete
Length = 901
Score = 138 bits (348), Expect = 2e-33
Identities = 83/205 (40%), Positives = 115/205 (55%)
Frame = +1
Query: 6 VLLLLVLTTTVTADPDNLQDLCVADLASAILVNGFTCKPASNVTAADFSTNVLAKPGATN 65
V LL +L++T A +QD CVADL A +G+ CKP +NVT+ DF LA+
Sbjct: 28 VFLLSLLSSTSHA---TVQDFCVADLKGADTPSGYPCKPPANVTSDDFVYTGLAEAANVT 198
Query: 66 NTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRATEIVYVLEGQLDVGFI 125
N + VT A V + PGLN L +S AR+D GG+ P HTHP A E++ VL+G + GFI
Sbjct: 199 NIINAAVTPAFVAQFPGLNGLDLSAARLDLGPGGVIPLHTHPGANELLIVLQGHILAGFI 378
Query: 126 TTANVLISKTIVKGETFVFPKGLVHFQKNSGYVPAAVIAGFNSQLQGTVNIPLTLFASTP 185
++ N++ K + KGE VFP+GL+HFQ G A F+S G + LFAS
Sbjct: 379 SSGNIVYQKVLKKGELMVFPQGLLHFQIAVGKRKALAFPVFSSAFPGLQILDFALFASNF 558
Query: 186 PVPDNILTQAFQIGTKEVQKIKSRL 210
P ++TQ + V+K+K L
Sbjct: 559 STP--LVTQTTFLDPAIVKKLKGVL 627
>TC227306 similar to GB|AAB51752.1|1934730|ATU95036 germin-like protein
{Arabidopsis thaliana;} , partial (46%)
Length = 446
Score = 135 bits (340), Expect = 1e-32
Identities = 68/107 (63%), Positives = 77/107 (71%)
Frame = +1
Query: 4 IAVLLLLVLTTTVTADPDNLQDLCVADLASAILVNGFTCKPASNVTAADFSTNVLAKPGA 63
I V+ ++ +DPD LQDLCVA +S + VNGF CK SNVT ADF LAKPG
Sbjct: 124 IFVIFCCAISFAFASDPDTLQDLCVALPSSGVKVNGFACKAESNVTEADFFFAGLAKPGV 303
Query: 64 TNNTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRAT 110
NNT GS+VT ANV+KIPGLNTLGVS +RIDY GLNPPHTHPRAT
Sbjct: 304 INNTVGSVVTGANVEKIPGLNTLGVSFSRIDYKAEGLNPPHTHPRAT 444
>TC211239 similar to UP|Q9M3Y4 (Q9M3Y4) Germin-like protein, complete
Length = 877
Score = 134 bits (337), Expect = 3e-32
Identities = 78/209 (37%), Positives = 120/209 (57%)
Frame = +3
Query: 1 MKIIAVLLLLVLTTTVTADPDNLQDLCVADLASAILVNGFTCKPASNVTAADFSTNVLAK 60
MK+I + LL L ++ + N D CVA+L +G+ CKP + VT DF +
Sbjct: 45 MKMIYIFFLLALLSSTSHASVN--DFCVANLKGPDSPSGYQCKPPNTVTVNDFVLSGFVA 218
Query: 61 PGATNNTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRATEIVYVLEGQL 120
G T N F + +T A V ++PG+N LG+S AR+D A GG P H+HP A+EI+ +++GQ+
Sbjct: 219 -GNTTNAFNAALTPAFVTELPGVNGLGISAARLDLAKGGSVPMHSHPGASEILIMVKGQI 395
Query: 121 DVGFITTANVLISKTIVKGETFVFPKGLVHFQKNSGYVPAAVIAGFNSQLQGTVNIPLTL 180
G I T + KT+ G+ VFP+GL+HFQ NSG A F+S G + L L
Sbjct: 396 TAG-ILTPGAVYEKTLKPGDVMVFPQGLLHFQANSGKGKATAFVAFSSANPGAQLLDLLL 572
Query: 181 FASTPPVPDNILTQAFQIGTKEVQKIKSR 209
F ++ +P +++ Q + +V+K+K+R
Sbjct: 573 FGNS--LPSDLVAQTTFLDVAQVKKLKAR 653
>TC214056 similar to UP|Q9AR81 (Q9AR81) Germin-like protein precursor,
complete
Length = 1020
Score = 134 bits (337), Expect = 3e-32
Identities = 82/205 (40%), Positives = 113/205 (55%)
Frame = +2
Query: 6 VLLLLVLTTTVTADPDNLQDLCVADLASAILVNGFTCKPASNVTAADFSTNVLAKPGATN 65
V LL +L++T A +QD CVADL A G+ CKP +NVT+ DF LA+
Sbjct: 29 VFLLFLLSSTSHA---TVQDFCVADLKGADTPAGYPCKPPANVTSDDFVYTGLAEAANVT 199
Query: 66 NTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRATEIVYVLEGQLDVGFI 125
N + VT A V + PGLN L +S AR+D G+ P HTHP A E++ VL+G + GFI
Sbjct: 200 NIINAAVTPAFVAQFPGLNGLELSAARLDLGPSGVIPLHTHPGANELLIVLQGHILAGFI 379
Query: 126 TTANVLISKTIVKGETFVFPKGLVHFQKNSGYVPAAVIAGFNSQLQGTVNIPLTLFASTP 185
++ N++ K + KGE VFP+GL+HFQ G A F+S G + LFAS
Sbjct: 380 SSGNIVYQKVLKKGELMVFPQGLLHFQIAVGKRKALAFPVFSSANPGLQILDFALFASNF 559
Query: 186 PVPDNILTQAFQIGTKEVQKIKSRL 210
P ++TQ + V+K+K L
Sbjct: 560 STP--LVTQTTFLDPDLVKKLKGVL 628
>TC215814 similar to UP|Q9AR81 (Q9AR81) Germin-like protein precursor,
partial (95%)
Length = 1087
Score = 133 bits (334), Expect = 7e-32
Identities = 74/209 (35%), Positives = 115/209 (54%)
Frame = +1
Query: 2 KIIAVLLLLVLTTTVTADPDNLQDLCVADLASAILVNGFTCKPASNVTAADFSTNVLAKP 61
K+I L ++ + ++ ++ D CVAD G++CK + VT DF + L
Sbjct: 109 KMILTLFFNIILSLLSLSHASVVDFCVADYTGPNGPAGYSCKSPAKVTVDDFVYSGLGTA 288
Query: 62 GATNNTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRATEIVYVLEGQLD 121
G T+N + VT A + PG+N LG+S+AR+D A GG+ P HTHP A+E++ V++G +
Sbjct: 289 GNTSNIIKAAVTPAFDAQFPGVNGLGISIARLDLAAGGVIPLHTHPGASELLVVVQGTIC 468
Query: 122 VGFITTANVLISKTIVKGETFVFPKGLVHFQKNSGYVPAAVIAGFNSQLQGTVNIPLTLF 181
GF+ + N + KT+ KG+ V+P+GL+HFQ N G A F+S G + +LF
Sbjct: 469 TGFVASDNTVYLKTLKKGDVMVYPQGLLHFQINDGESQALAFVSFSSANPGLQILDFSLF 648
Query: 182 ASTPPVPDNILTQAFQIGTKEVQKIKSRL 210
S P ++TQ I V+K+K L
Sbjct: 649 KS--DFPTELITQTTFIDAAVVKKLKGVL 729
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.136 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,997,009
Number of Sequences: 63676
Number of extensions: 91781
Number of successful extensions: 495
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of query: 213
length of database: 12,639,632
effective HSP length: 93
effective length of query: 120
effective length of database: 6,717,764
effective search space: 806131680
effective search space used: 806131680
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Medicago: description of AC149038.15