BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148995.10 - phase: 0
(352 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC206806 weakly similar to GB|BAB08380.1|9757771|AB005240 RING z... 494 e-140
TC206807 247 5e-66
TC229388 weakly similar to GB|AAH46830.1|29145024|BC046830 mahog... 223 1e-58
TC220792 weakly similar to UP|Q84ME1 (Q84ME1) At5g19080/T16G12_1... 119 3e-56
BE190756 192 1e-49
BE802719 157 5e-39
TC208770 weakly similar to UP|Q84ME1 (Q84ME1) At5g19080/T16G12_1... 152 2e-37
TC219183 152 3e-37
TC211549 144 5e-35
BM108200 118 4e-27
AI437685 86 3e-17
TC231626 similar to UP|Q9VXX2 (Q9VXX2) CG9101-PA, partial (10%) 80 1e-15
TC225011 similar to UP|Q09083 (Q09083) Hydroxyproline-rich glyco... 73 2e-13
BM091938 65 4e-11
TC225016 similar to UP|Q39835 (Q39835) Extensin, partial (32%) 63 2e-10
BI972004 similar to PIR|T10863|T10 extensin precursor - kidney b... 62 5e-10
BG652378 similar to PIR|T10863|T108 extensin precursor - kidney ... 61 7e-10
TC207021 similar to UP|Q940Z6 (Q940Z6) At1g12810/F13K23_4, parti... 60 2e-09
TC224968 similar to UP|Q39835 (Q39835) Extensin, partial (44%) 60 2e-09
BQ080447 similar to GP|15450467|gb| At1g12810/F13K23_4 {Arabidop... 57 1e-08
>TC206806 weakly similar to GB|BAB08380.1|9757771|AB005240 RING zinc finger
protein-like {Arabidopsis thaliana;} , partial (66%)
Length = 1433
Score = 494 bits (1273), Expect = e-140
Identities = 257/358 (71%), Positives = 286/358 (79%), Gaps = 7/358 (1%)
Frame = +2
Query: 1 MGNISSTGAHNRRRHAT---ASRRTHPPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYP 57
MGNI S+G+++R RH + RR HPPPPP ++PQ E+ ++FVYP AA P
Sbjct: 131 MGNIGSSGSNSRWRHGGGGGSGRRIHPPPPPVMSPQ-EVTANRFVYPPAAT--------P 283
Query: 58 QYHYPGYYPPPIPMPHH-HHPHPHPH-PHMDPAWVSRYYPCGPVVNQPAPFVEHQKAVTI 115
++YPGYYPPP MP P+ H H P +DP WV RY P P PAP+VEHQKAVTI
Sbjct: 284 YHNYPGYYPPPTTMPAPLPAPYDHHHRPAVDPMWV-RYPPAAPPA--PAPYVEHQKAVTI 454
Query: 116 RNDVNIKKETIVISPDEENPGFFLVSFTFDAAVSGSITIFFFAKEDEGCILTPTKETHLA 175
+NDVNIKKET+ I PD+ENPG FLVSFTFDA VSGSITI FFAKE EGC LTP KE L
Sbjct: 455 KNDVNIKKETLRIEPDDENPGCFLVSFTFDATVSGSITILFFAKEGEGCTLTPMKENVLP 634
Query: 176 PVTVQFQQGLGQKFRQQAGTGINFSMFEESDLVKVGDVDVYPLAVKADASSDNHDGS--N 233
PVTV FQQGLGQKF+Q AGTGI+FS FEES+L+KVGD+DVYP+A+KADASS +HD S N
Sbjct: 635 PVTVNFQQGLGQKFKQPAGTGIDFSTFEESELLKVGDMDVYPVAIKADASSSDHDESKSN 814
Query: 234 ETETSSKPNSQITQAVFEKEKGEFRVKVVKQILSVNGMRYELQEIYGIGNSVESDVDDNE 293
ET +S NSQITQAVFEKEKGEF+VKVVKQIL VNGMRYELQEIYGIGNSVESDVD N+
Sbjct: 815 ETPSSGSSNSQITQAVFEKEKGEFQVKVVKQILWVNGMRYELQEIYGIGNSVESDVDGND 994
Query: 294 QGKECVICLSEPRDTIVHPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVGTE 351
GKECVICLSEPRDT V PCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVG E
Sbjct: 995 PGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVGPE 1168
>TC206807
Length = 701
Score = 247 bits (631), Expect = 5e-66
Identities = 122/147 (82%), Positives = 129/147 (86%), Gaps = 2/147 (1%)
Frame = +2
Query: 207 LVKVGDVDVYPLAVKADASSDNHDGS--NETETSSKPNSQITQAVFEKEKGEFRVKVVKQ 264
L+K GD+DVYP+A+KADA +HD S NET S NSQITQAVFEKEKGEF+VKVVKQ
Sbjct: 2 LLKAGDMDVYPVAIKADAXXGDHDESKSNETPASGSSNSQITQAVFEKEKGEFQVKVVKQ 181
Query: 265 ILSVNGMRYELQEIYGIGNSVESDVDDNEQGKECVICLSEPRDTIVHPCRHMCMCSGCAK 324
IL VNGMRYELQEIYGIGNSVESDVD N+ GKECVICLSEPRDT V PCRHMCMCSGCAK
Sbjct: 182 ILWVNGMRYELQEIYGIGNSVESDVDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAK 361
Query: 325 VLRFQTNRCPICRQPVERLLEIKVGTE 351
VLRFQTNRCPICRQPVERLLEIKVG E
Sbjct: 362 VLRFQTNRCPICRQPVERLLEIKVGPE 442
>TC229388 weakly similar to GB|AAH46830.1|29145024|BC046830 mahogunin, ring
finger 1 {Mus musculus;} , partial (9%)
Length = 791
Score = 223 bits (567), Expect = 1e-58
Identities = 104/125 (83%), Positives = 114/125 (91%)
Frame = +3
Query: 228 NHDGSNETETSSKPNSQITQAVFEKEKGEFRVKVVKQILSVNGMRYELQEIYGIGNSVES 287
N+D S+ + TS NSQITQ VFEKEKGEFRVKV KQIL VNGMRYELQEIYGIGNS ES
Sbjct: 3 NYDESDRSPTSGNTNSQITQVVFEKEKGEFRVKVAKQILWVNGMRYELQEIYGIGNSTES 182
Query: 288 DVDDNEQGKECVICLSEPRDTIVHPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIK 347
D+D+N+QGK+CVIC SEPRDTIVHPCRHMCMCSGCAKVLRFQT+RCPICRQP+ERLLEIK
Sbjct: 183 DLDENDQGKDCVICWSEPRDTIVHPCRHMCMCSGCAKVLRFQTDRCPICRQPIERLLEIK 362
Query: 348 VGTEE 352
VG+EE
Sbjct: 363 VGSEE 377
>TC220792 weakly similar to UP|Q84ME1 (Q84ME1) At5g19080/T16G12_120, partial
(44%)
Length = 1156
Score = 119 bits (298), Expect(3) = 3e-56
Identities = 79/238 (33%), Positives = 105/238 (43%), Gaps = 11/238 (4%)
Frame = +3
Query: 1 MGNISSTGAHNRRR----------HATASRRTHPPPPPPVTPQPEIAPHQFVYPGAAPYP 50
MG S NRRR H HPPPPPP PQ Y Y
Sbjct: 123 MGISWSNSNSNRRRRRINTYFHPPHLPPPYYYHPPPPPPPPPQGYFIASTNPYASTTGYV 302
Query: 51 NPPMHYPQYHYPGYYPPPIPMPHHHHPHPHPHPHMDPAWVSRYYPCGPVVNQPAPFVEHQ 110
PP P +YP ++ + + ++ P P+V+HQ
Sbjct: 303 GPP---PTQYYPN--------------------GVNSVMLHQQPLASGILASPPPYVDHQ 413
Query: 111 KAVTIRNDVNIKKETIVISPDEENPGFFLVSFTFDAAVSGSITIFFFAKEDEGCILTPTK 170
IR DVN+ K T+ + D N L+SF FDA GSITIF+ AKE+E C P
Sbjct: 414 ATKKIRIDVNLHKHTLRLHLDPNNSDHHLISFDFDALYDGSITIFYLAKEEEKCRFIPLF 593
Query: 171 ETHLAPVTVQFQQGLGQKFRQQAGTGINFSMFEESDLVKVG-DVDVYPLAVKADASSD 227
P+T FQ+G GQKF Q +GTGI+ FE DL + + DV+ L + A+ +S+
Sbjct: 594 PDVFEPITFPFQKGAGQKFCQPSGTGIDLGFFELDDLSRPSPEEDVFSLVICAETTSN 767
Score = 112 bits (281), Expect(3) = 3e-56
Identities = 47/72 (65%), Positives = 59/72 (81%)
Frame = +1
Query: 277 EIYGIGNSVESDVDDNEQGKECVICLSEPRDTIVHPCRHMCMCSGCAKVLRFQTNRCPIC 336
E+YGIG+S +D DDN+ GKECVIC++EP+DT V CRHMCMC CAK LR Q+N+C IC
Sbjct: 838 ELYGIGSSTAADFDDNDPGKECVICMTEPKDTAVLTCRHMCMCGDCAKALRPQSNKCLIC 1017
Query: 337 RQPVERLLEIKV 348
RQP+E L+EIK+
Sbjct: 1018RQPIEELIEIKI 1053
Score = 25.8 bits (55), Expect(3) = 3e-56
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +2
Query: 258 RVKVVKQILSVNGMRYEL 275
+VKVV+QIL ++ +RYEL
Sbjct: 785 QVKVVRQILWIDDVRYEL 838
>BE190756
Length = 420
Score = 192 bits (489), Expect = 1e-49
Identities = 100/138 (72%), Positives = 112/138 (80%)
Frame = +2
Query: 144 FDAAVSGSITIFFFAKEDEGCILTPTKETHLAPVTVQFQQGLGQKFRQQAGTGINFSMFE 203
FDA VSGSITI+FFAKE EG ILTP KE L P+ V +QGLGQK +Q GT + FS+FE
Sbjct: 2 FDATVSGSITIYFFAKEGEGWILTPMKENPLGPMAVHSKQGLGQKLDRQLGTVLIFSVFE 181
Query: 204 ESDLVKVGDVDVYPLAVKADASSDNHDGSNETETSSKPNSQITQAVFEKEKGEFRVKVVK 263
ES+L+KVG+ DVYPLAVKADAS NHD S+ + TSS NSQITQ +FEKEKGEFRVKVVK
Sbjct: 182 ESELLKVGEKDVYPLAVKADASPGNHDESDRSPTSSNTNSQITQTMFEKEKGEFRVKVVK 361
Query: 264 QILSVNGMRYELQEIYGI 281
QIL VNGMRYEL EIYGI
Sbjct: 362 QILWVNGMRYELXEIYGI 415
>BE802719
Length = 385
Score = 157 bits (398), Expect = 5e-39
Identities = 74/132 (56%), Positives = 98/132 (74%), Gaps = 2/132 (1%)
Frame = +2
Query: 214 DVYPLAVKADASSDNHDGSNETETSSKPNSQITQAVFEKEKG--EFRVKVVKQILSVNGM 271
DV+PL + A+ +S++ + P+ QITQAV EK G F+VKVV+QIL ++ +
Sbjct: 11 DVFPLVICAETTSNS-------VIDASPHMQITQAVLEKSNGIGPFQVKVVRQILWIDDI 169
Query: 272 RYELQEIYGIGNSVESDVDDNEQGKECVICLSEPRDTIVHPCRHMCMCSGCAKVLRFQTN 331
RYEL+E+YGIG+S +D DDN+ GKECVIC++EP+DT V PCRHMCMC CAK LR Q+N
Sbjct: 170 RYELRELYGIGSSTVADFDDNDPGKECVICMTEPKDTAVLPCRHMCMCGDCAKALRLQSN 349
Query: 332 RCPICRQPVERL 343
+CPICRQP+E L
Sbjct: 350 KCPICRQPIEEL 385
>TC208770 weakly similar to UP|Q84ME1 (Q84ME1) At5g19080/T16G12_120, partial
(30%)
Length = 753
Score = 152 bits (385), Expect = 2e-37
Identities = 89/225 (39%), Positives = 112/225 (49%), Gaps = 20/225 (8%)
Frame = +1
Query: 21 RTHPPPPPPVT-------PQPEIAPHQFVYPGAAPY----PNPPMHYPQYHY-------- 61
+ PPPPPP P P P + P A PY P PP PQ H
Sbjct: 19 QNRPPPPPPSYYYHTESHPAPPPQPQGYFLPSATPYAPPPPMPPPPPPQTHSISFYYSSN 198
Query: 62 PGYYPPPIPMPHHHHPHPHPHPHMDPAWVSRYYPCGPVVNQPAPFVEHQKAVTIRNDVNI 121
P Y P P H+P + HP P + P P P P+V+HQ A IRN VN+
Sbjct: 199 PNSYGTPTLAPRFHYPQHYYHPQPQPQLAAWPVP-RPAAPTPPPYVDHQTAKKIRNYVNV 375
Query: 122 KKETIVISPDEENPGFFLVSFTFDAAVSGSITIFFFAKEDEGCILTPTKETHLAPVTVQF 181
K+T+ + D+ NP L+SF FDA GSITI +FAKE+E C P PV + F
Sbjct: 376 HKDTLRLEVDDHNPDLHLLSFVFDAVYDGSITILYFAKEEEKCRFVPLYPEAFQPVRIPF 555
Query: 182 QQGLGQKFRQQAGTGINFSMFEESDLVKVG-DVDVYPLAVKADAS 225
Q+G+GQKF Q +GTGI+ FE DL K DV+PL + A+ S
Sbjct: 556 QKGVGQKFAQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETS 690
>TC219183
Length = 742
Score = 152 bits (383), Expect = 3e-37
Identities = 70/107 (65%), Positives = 85/107 (79%), Gaps = 2/107 (1%)
Frame = +1
Query: 244 QITQAVFEKEKGE--FRVKVVKQILSVNGMRYELQEIYGIGNSVESDVDDNEQGKECVIC 301
QITQ V EK G F +KVVKQIL ++G+RYEL+E+YGIGNS +D DDN+ GKECVIC
Sbjct: 7 QITQGVLEKSNGAGPFLIKVVKQILWIDGVRYELRELYGIGNSSAADFDDNDPGKECVIC 186
Query: 302 LSEPRDTIVHPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKV 348
++EP+DT V PCRHMCMCS CA R Q+N+CPICRQ +E L+EIKV
Sbjct: 187 MTEPKDTAVLPCRHMCMCSECANAHRLQSNKCPICRQSIEELIEIKV 327
>TC211549
Length = 725
Score = 144 bits (364), Expect = 5e-35
Identities = 65/110 (59%), Positives = 79/110 (71%), Gaps = 6/110 (5%)
Frame = +1
Query: 8 GAHNRRRHATA-SRRTHPPPPPPV----TPQPEIAPHQFVYPGAA-PYPNPPMHYPQYHY 61
G H +RR + + ++R+ PP TPQPEIA + FVY GAA PYPNPP+HYPQYHY
Sbjct: 394 GQHLKRRQSPSPTQRSFTAEPPAAAAARTPQPEIAANPFVYHGAAAPYPNPPLHYPQYHY 573
Query: 62 PGYYPPPIPMPHHHHPHPHPHPHMDPAWVSRYYPCGPVVNQPAPFVEHQK 111
PGYYPP PMP+H H H H H HMDPAW+ ++P GP++ PAPFVEHQK
Sbjct: 574 PGYYPPVPPMPYHPHQHQHHHRHMDPAWIQGHFPSGPMMPNPAPFVEHQK 723
Score = 49.7 bits (117), Expect = 2e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +2
Query: 1 MGNISSTGAHNRRRHATASRRTHPPPPPPV 30
MGNISS G + RRRH+ ASRR+HPPPPPPV
Sbjct: 392 MGNISS-GGNPRRRHSGASRRSHPPPPPPV 478
>BM108200
Length = 410
Score = 118 bits (296), Expect = 4e-27
Identities = 57/75 (76%), Positives = 64/75 (85%)
Frame = +2
Query: 156 FFAKEDEGCILTPTKETHLAPVTVQFQQGLGQKFRQQAGTGINFSMFEESDLVKVGDVDV 215
FFAKE EGCILTP KE LAPV+V F+QGLG KFRQ AGTGI+FS+FE S+L+KVG+ DV
Sbjct: 2 FFAKEGEGCILTPMKENQLAPVSVHFEQGLGXKFRQAAGTGIDFSVFEXSELLKVGEKDV 181
Query: 216 YPLAVKADASSDNHD 230
YPLAVKADAS NHD
Sbjct: 182 YPLAVKADASPGNHD 226
>AI437685
Length = 412
Score = 85.9 bits (211), Expect = 3e-17
Identities = 42/59 (71%), Positives = 48/59 (81%), Gaps = 5/59 (8%)
Frame = +1
Query: 1 MGNISSTGA----HNRRRHATASRRTHPPPPPPVTPQPEIAPHQFVYPGAA-PYPNPPM 54
MGNISS+G + RRRH+ ASRR+HPPPPPPVTPQPEIA + FVY GAA PYPNPP+
Sbjct: 235 MGNISSSGGVGGGNPRRRHSGASRRSHPPPPPPVTPQPEIAANPFVYHGAASPYPNPPL 411
>TC231626 similar to UP|Q9VXX2 (Q9VXX2) CG9101-PA, partial (10%)
Length = 663
Score = 80.5 bits (197), Expect = 1e-15
Identities = 45/93 (48%), Positives = 54/93 (57%), Gaps = 4/93 (4%)
Frame = -3
Query: 1 MGNISSTGAHNRRRHAT---ASRRTHPPPPPPVTPQPEIAPHQFVYPGAA-PYPNPPMHY 56
MGNI S+G+++RRRH + RR HPPPP V P PE+ +QFVYP AA PY N P +Y
Sbjct: 259 MGNIGSSGSNSRRRHGGGGGSGRRIHPPPPQ-VMPPPEVTANQFVYPPAATPYHNYPGYY 83
Query: 57 PQYHYPGYYPPPIPMPHHHHPHPHPHPHMDPAW 89
P P P P P P+HH H DP W
Sbjct: 82 PA---PTTMPAPXPAPYHH----HHRTAXDPMW 5
>TC225011 similar to UP|Q09083 (Q09083) Hydroxyproline-rich glycoprotein
precursor, partial (20%)
Length = 964
Score = 72.8 bits (177), Expect = 2e-13
Identities = 41/93 (44%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Frame = +2
Query: 23 HPPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHY----PQYHYPGYYPPPIPMPHHH--- 75
+P PPPPV P P PH +P P+P+PP Y P P YY P P HHH
Sbjct: 56 YPSPPPPVHPYPH--PHPHPHPHPHPHPHPPYVYHSPPPPPKKPYYYHSPPPPVHHHPYP 229
Query: 76 HPHPHPHPHMDPAWVSRYY---PCGPVVNQPAP 105
H HPHPHPH P YY P PV P P
Sbjct: 230 HLHPHPHPHPPPPPKKPYYYHSPPPPVHPHPYP 328
Score = 64.3 bits (155), Expect = 8e-11
Identities = 34/91 (37%), Positives = 44/91 (47%), Gaps = 8/91 (8%)
Frame = +2
Query: 23 HPPPPPPV------TPQPEIAPHQF--VYPGAAPYPNPPMHYPQYHYPGYYPPPIPMPHH 74
H PPPPP +P P + H + ++P P+P PP P Y Y+ PP P+ H
Sbjct: 152 HSPPPPPKKPYYYHSPPPPVHHHPYPHLHPHPHPHPPPPPKKPYY----YHSPPPPVHPH 319
Query: 75 HHPHPHPHPHMDPAWVSRYYPCGPVVNQPAP 105
+PHPHPHPH P +P P V P
Sbjct: 320 PYPHPHPHPHPYPHPHPHPHPHPPYVYHSPP 412
Score = 55.8 bits (133), Expect = 3e-08
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Frame = +2
Query: 10 HNRRRHATASRRTHPPPPPPV-----TPQPEIAPHQFVYPGAA--PYPNPPMHYPQYHYP 62
H+ H HPPPPP +P P + PH + +P PYP+P H P H P
Sbjct: 215 HHPYPHLHPHPHPHPPPPPKKPYYYHSPPPPVHPHPYPHPHPHPHPYPHPHPH-PHPHPP 391
Query: 63 GYYPPPIPMPHHHHPHPHPHPHMDPAWVSRYYPCGPVVNQPAP 105
Y P P P + +P P P + P ++ PV + P P
Sbjct: 392 YVYHSPPPPPKKPYKYPSPPPPVHPPYIPH-----PVYHSPPP 505
Score = 52.0 bits (123), Expect = 4e-07
Identities = 37/102 (36%), Positives = 44/102 (42%), Gaps = 16/102 (15%)
Frame = +2
Query: 24 PPPPPPVTPQPEIAPHQFVYPGAAPY-------PNPPMH---YPQYHYPGYYPPPIPMPH 73
PPPP P P + PH +P P P PP+H YP H P +P P P
Sbjct: 197 PPPPVHHHPYPHLHPHPHPHPPPPPKKPYYYHSPPPPVHPHPYPHPH-PHPHPYPHP--- 364
Query: 74 HHHPHPHPHP----HMDPAWVSR--YYPCGPVVNQPAPFVEH 109
HPHPHPHP H P + YP P P P++ H
Sbjct: 365 --HPHPHPHPPYVYHSPPPPPKKPYKYPSPPPPVHP-PYIPH 481
Score = 48.5 bits (114), Expect = 4e-06
Identities = 29/81 (35%), Positives = 32/81 (38%)
Frame = +2
Query: 23 HPPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIPMPHHHHPHPHPH 82
H PPPPP P YP+PP PP P PH H PHPHPH
Sbjct: 20 HSPPPPPKKPYK--------------YPSPP------------PPVHPYPHPH-PHPHPH 118
Query: 83 PHMDPAWVSRYYPCGPVVNQP 103
PH P Y+ P +P
Sbjct: 119 PHPHPHPPYVYHSPPPPPKKP 181
Score = 41.6 bits (96), Expect = 5e-04
Identities = 27/70 (38%), Positives = 29/70 (40%), Gaps = 22/70 (31%)
Frame = +2
Query: 62 PGYY--PPP---------------IPMPH-HHHPHPHPHPHMDPAWVSRYYPCGP----V 99
P YY PPP P PH H HPHPHPHPH P +V P P
Sbjct: 8 PYYYHSPPPPPKKPYKYPSPPPPVHPYPHPHPHPHPHPHPHPHPPYVYHSPPPPPKKPYY 187
Query: 100 VNQPAPFVEH 109
+ P P V H
Sbjct: 188 YHSPPPPVHH 217
Score = 40.4 bits (93), Expect = 0.001
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 13/73 (17%)
Frame = +2
Query: 23 HPPPPPPVTPQPEIAPHQ-FVY---------PGAAPYPNPPMHYPQYHYPGYY---PPPI 69
HP P P P P PH +VY P P P PP+H P +P Y+ PPP
Sbjct: 335 HPHPHPYPHPHPHPHPHPPYVYHSPPPPPKKPYKYPSPPPPVHPPYIPHPVYHSPPPPPY 514
Query: 70 PMPHHHHPHPHPH 82
P+ + P P+
Sbjct: 515 KKPYIYASPPPPY 553
Score = 31.2 bits (69), Expect = 0.74
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +2
Query: 23 HPPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIPMPHHHH 76
+P PPPPV P PH Y +PP P Y P Y P P H+ H
Sbjct: 437 YPSPPPPV--HPPYIPHPV-------YHSPPP--PPYKKPYIYASPPPPYHY*H 565
>BM091938
Length = 421
Score = 65.5 bits (158), Expect = 4e-11
Identities = 34/81 (41%), Positives = 38/81 (45%), Gaps = 5/81 (6%)
Frame = +2
Query: 23 HPPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHY----PQYHYPGYYPPPIPMPH-HHHP 77
H PPPP P H P P P +Y P + YP +P P P PH H HP
Sbjct: 5 HSPPPPSPPPPKPYYYHSPPPPSPPPPKKKPYYYHSPPPPHPYPHPHPHPYPHPHPHPHP 184
Query: 78 HPHPHPHMDPAWVSRYYPCGP 98
HPHPHPH P +V YP P
Sbjct: 185HPHPHPHPHPPYV---YPSPP 238
Score = 62.8 bits (151), Expect = 2e-10
Identities = 34/83 (40%), Positives = 42/83 (49%), Gaps = 1/83 (1%)
Frame = +2
Query: 24 PPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIPMPHHH-HPHPHPH 82
PPPP P P+P + + P P PP P Y++ PPP P PH H HP+PHPH
Sbjct: 11 PPPPSPPPPKP-----YYYHSPPPPSPPPPKKKPYYYHSP--PPPHPYPHPHPHPYPHPH 169
Query: 83 PHMDPAWVSRYYPCGPVVNQPAP 105
PH P +P P V P+P
Sbjct: 170 PHPHPHPHPHPHPHPPYV-YPSP 235
Score = 55.5 bits (132), Expect = 4e-08
Identities = 38/107 (35%), Positives = 46/107 (42%), Gaps = 12/107 (11%)
Frame = +2
Query: 15 HATASRRTHPPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQ--------YHYPGYYP 66
H+ +P P P P P PH +P P+P+PP YP Y YP P
Sbjct: 107 HSPPPPHPYPHPHPHPYPHPH--PHPHPHPHPHPHPHPPYVYPSPPPPPKKPYKYPS--P 274
Query: 67 PPIPMPHHHHPHPHP---HPHMDPAWVSRY-YPCGPVVNQPAPFVEH 109
PP P HH+PHPHP H P+ Y YP P P P+ H
Sbjct: 275 PP---PVHHYPHPHPPFVHYSPPPSPKKPYKYPSPPPPVHP-PYTPH 403
Score = 40.0 bits (92), Expect = 0.002
Identities = 22/55 (40%), Positives = 26/55 (47%)
Frame = +2
Query: 23 HPPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIPMPHHHHP 77
+P PPPPV P P FV+ P P P YP P +PP P P +H P
Sbjct: 263 YPSPPPPVHHYPHPHP-PFVHYSPPPSPKKPYKYPSPP-PPVHPPYTPHPVYHSP 421
Score = 39.7 bits (91), Expect = 0.002
Identities = 29/86 (33%), Positives = 33/86 (37%), Gaps = 28/86 (32%)
Frame = +2
Query: 23 HPPPPPPVTPQPEIAPHQ-FVYPGAAP-------YPNPPM---HYP-------------- 57
HP P P P P PH +VYP P YP+PP HYP
Sbjct: 161 HPHPHPHPHPHPHPHPHPPYVYPSPPPPPKKPYKYPSPPPPVHHYPHPHPPFVHYSPPPS 340
Query: 58 ---QYHYPGYYPPPIPMPHHHHPHPH 80
Y YP PPP+ P+ HP H
Sbjct: 341 PKKPYKYPS-PPPPVHPPYTPHPVYH 415
Score = 33.1 bits (74), Expect = 0.19
Identities = 16/51 (31%), Positives = 20/51 (38%), Gaps = 22/51 (43%)
Frame = +2
Query: 59 YHYPGYYPPPIPMPHHHH----------------------PHPHPHPHMDP 87
YH P PP P P+++H PHP+PHPH P
Sbjct: 2 YHSPPPPSPPPPKPYYYHSPPPPSPPPPKKKPYYYHSPPPPHPYPHPHPHP 154
>TC225016 similar to UP|Q39835 (Q39835) Extensin, partial (32%)
Length = 973
Score = 63.2 bits (152), Expect = 2e-10
Identities = 34/85 (40%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Frame = +2
Query: 23 HPPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIPMPH--------- 73
H PPPPP +P Y +P P PP P Y++ P P P PH
Sbjct: 143 HSPPPPPPKKKP--------YYYHSPPPPPPKKKPYYYHSPPPPHPYPHPHPHPYPHPHP 298
Query: 74 HHHPHPHPHPHMDPAWVSRYYPCGP 98
H HPHPHPHPH P +V YP P
Sbjct: 299 HPHPHPHPHPHPHPPYV---YPSPP 364
Score = 55.5 bits (132), Expect = 4e-08
Identities = 38/107 (35%), Positives = 46/107 (42%), Gaps = 12/107 (11%)
Frame = +2
Query: 15 HATASRRTHPPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQ--------YHYPGYYP 66
H+ +P P P P P PH +P P+P+PP YP Y YP P
Sbjct: 233 HSPPPPHPYPHPHPHPYPHPH--PHPHPHPHPHPHPHPPYVYPSPPPPPKKPYKYPS--P 400
Query: 67 PPIPMPHHHHPHPHP---HPHMDPAWVSRY-YPCGPVVNQPAPFVEH 109
PP P HH+PHPHP H P+ Y YP P P P+ H
Sbjct: 401 PP---PVHHYPHPHPPFVHYSPPPSPKKPYKYPSPPPPVHP-PYTPH 529
Score = 53.5 bits (127), Expect = 1e-07
Identities = 31/89 (34%), Positives = 41/89 (45%), Gaps = 6/89 (6%)
Frame = +2
Query: 23 HPPPPPPVTPQPEI-----APHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIPMPHHHHP 77
H PPPPP +P PH + +P PYP+P +P +P P P PH H P
Sbjct: 188 HSPPPPPPKKKPYYYHSPPPPHPYPHPHPHPYPHP--------HPHPHPHPHPHPHPHPP 343
Query: 78 HPHPHPHMDPAWVSRY-YPCGPVVNQPAP 105
+ +P P P +Y P PV + P P
Sbjct: 344 YVYPSPPPPPKKPYKYPSPPPPVHHYPHP 430
Score = 52.8 bits (125), Expect = 2e-07
Identities = 37/96 (38%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Frame = +2
Query: 23 HPPPPPPVTPQPEIAPHQ-FVYPGAAP-------YPNPPM---HYPQYHYP--GYYPPPI 69
HP P P P P PH +VYP P YP+PP HYP H P Y PPP
Sbjct: 287 HPHPHPHPHPHPHPHPHPPYVYPSPPPPPKKPYKYPSPPPPVHHYPHPHPPFVHYSPPPS 466
Query: 70 PMPHHHHPHPHP--HPHMDPAWVSRYYPCGPVVNQP 103
P + +P P P HP P V + P P N+P
Sbjct: 467 PKKPYKYPSPPPPVHPPYTPHPV-YHSPPPPPTNKP 571
Score = 52.4 bits (124), Expect = 3e-07
Identities = 27/82 (32%), Positives = 36/82 (42%), Gaps = 19/82 (23%)
Frame = +2
Query: 25 PPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIPMPHHHH-------- 76
P PP V P P P + Y + P P+PP P Y++ PPP P+++H
Sbjct: 35 PHPPYVYPSPPPPPKKPYYYHSPPPPSPPPPKPYYYHSPPPPPPKKKPYYYHSPPPPPPK 214
Query: 77 -----------PHPHPHPHMDP 87
PHP+PHPH P
Sbjct: 215 KKPYYYHSPPPPHPYPHPHPHP 280
Score = 48.1 bits (113), Expect = 6e-06
Identities = 35/127 (27%), Positives = 42/127 (32%), Gaps = 43/127 (33%)
Frame = +2
Query: 23 HPPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMH-YPQYHYPGYYPPPI--------PMPH 73
H PPPP P P P+ +P P+P+P H +P Y YP PPP P P
Sbjct: 233 HSPPPPHPYPHPHPHPYPHPHPHPHPHPHPHPHPHPPYVYPSPPPPPKKPYKYPSPPPPV 412
Query: 74 HHHPHPHP----------------------------------HPHMDPAWVSRYYPCGPV 99
HH+PHPHP H P Y P
Sbjct: 413 HHYPHPHPPFVHYSPPPSPKKPYKYPSPPPPVHPPYTPHPVYHSPPPPPTNKPYIYASP- 589
Query: 100 VNQPAPF 106
P P+
Sbjct: 590 ---PPPY 601
Score = 38.5 bits (88), Expect = 0.005
Identities = 28/86 (32%), Positives = 37/86 (42%), Gaps = 2/86 (2%)
Frame = +2
Query: 26 PPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIPM--PHHHHPHPHPHP 83
PPPPV P +VYP P P P +Y H P PP P P+++H P P P
Sbjct: 5 PPPPVHHYQHPHP-PYVYPSPPPPPKKPYYY---HSPP--PPSPPPPKPYYYHSPPPPPP 166
Query: 84 HMDPAWVSRYYPCGPVVNQPAPFVEH 109
P + Y+ P + P+ H
Sbjct: 167 KKKPYY---YHSPPPPPPKKKPYYYH 235
Score = 32.3 bits (72), Expect = 0.33
Identities = 17/43 (39%), Positives = 19/43 (43%), Gaps = 4/43 (9%)
Frame = +2
Query: 23 HPPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHY----PQYHY 61
+P PPPPV P PH + P N P Y P YHY
Sbjct: 485 YPSPPPPV--HPPYTPHPVYHSPPPPPTNKPYIYASPPPPYHY 607
>BI972004 similar to PIR|T10863|T10 extensin precursor - kidney bean, partial
(17%)
Length = 421
Score = 61.6 bits (148), Expect = 5e-10
Identities = 33/84 (39%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 23 HPPPPPPV------TPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIPMPHHHH 76
H PPPPP +P P P + P P PP P Y Y+ PP P+ HH +
Sbjct: 178 HSPPPPPKKPYYYHSPPPPSPPPPYKKPYFYHSPPPPPKKPYY----YHSPPPPVHHHPY 345
Query: 77 PHPHPHPHMDPAWVSRYYPCGPVV 100
PHPHPHPH P +P P V
Sbjct: 346 PHPHPHPHPYPHPHPHPHPHPPYV 417
Score = 59.3 bits (142), Expect = 3e-09
Identities = 32/80 (40%), Positives = 36/80 (45%), Gaps = 16/80 (20%)
Frame = +1
Query: 24 PPPPPPVTPQPEIAPHQFVYPGAAPY----PNPPMHYPQYHYPGYY---PPPIPMPH--- 73
PPPP P P+ H P PY P PP P Y P +Y PPP P+
Sbjct: 133 PPPPSPPPPKKPYYYHSPPPPPKKPYYYHSPPPPSPPPPYKKPYFYHSPPPPPKKPYYYH 312
Query: 74 ------HHHPHPHPHPHMDP 87
HHHP+PHPHPH P
Sbjct: 313 SPPPPVHHHPYPHPHPHPHP 372
Score = 43.1 bits (100), Expect = 2e-04
Identities = 32/97 (32%), Positives = 41/97 (41%), Gaps = 13/97 (13%)
Frame = +1
Query: 23 HPPPPPPV-----TPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYY---PPPIPMP-- 72
+PPPPP +P P P+ + P P P+PP P Y P YY PPP P P
Sbjct: 1 YPPPPPKKPYYYHSPPPPKKPYYYHSP---PPPSPP---PPYKKPYYYHSPPPPSPPPPK 162
Query: 73 ---HHHHPHPHPHPHMDPAWVSRYYPCGPVVNQPAPF 106
++H P P P YY P + P P+
Sbjct: 163 KPYYYHSPPPPPKK-------PYYYHSPPPPSPPPPY 252
Score = 37.4 bits (85), Expect = 0.010
Identities = 26/88 (29%), Positives = 33/88 (36%), Gaps = 3/88 (3%)
Frame = +1
Query: 25 PPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHY---PGYYPPPIPMPHHHHPHPHP 81
PPPPP P +P PP P Y++ P PPP P+++H P P
Sbjct: 4 PPPPPKKPYYYHSP-------------PPPKKPYYYHSPPPPSPPPPYKKPYYYHSPPPP 144
Query: 82 HPHMDPAWVSRYYPCGPVVNQPAPFVEH 109
P P YY P P+ H
Sbjct: 145 SP---PPPKKPYYYHSPPPPPKKPYYYH 219
Score = 34.3 bits (77), Expect = 0.087
Identities = 15/35 (42%), Positives = 19/35 (53%), Gaps = 4/35 (11%)
Frame = +1
Query: 26 PPPPVT----PQPEIAPHQFVYPGAAPYPNPPMHY 56
PPPPV P P PH + +P P+P+PP Y
Sbjct: 316 PPPPVHHHPYPHPHPHPHPYPHPHPHPHPHPPYVY 420
>BG652378 similar to PIR|T10863|T108 extensin precursor - kidney bean,
partial (14%)
Length = 361
Score = 61.2 bits (147), Expect = 7e-10
Identities = 33/70 (47%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Frame = +3
Query: 23 HPPPPPPVTPQ--PEIAPHQFVYPGAAPYPNPPMHY----PQYHYPGYYPPPIPMPHHHH 76
H PPPPP P P P YP P+P+PP Y P P YY P P P HHH
Sbjct: 150 HSPPPPPKKPYKYPSPPPPVHPYPHPHPHPHPPYVYHSPPPPPKKPYYYHSP-PPPVHHH 326
Query: 77 PHPH--PHPH 84
P+PH PHPH
Sbjct: 327 PYPHXXPHPH 356
Score = 55.5 bits (132), Expect = 4e-08
Identities = 38/104 (36%), Positives = 47/104 (44%), Gaps = 15/104 (14%)
Frame = +3
Query: 21 RTHPPPPPPVT-------PQPEIAPHQFVYPGAAPYPNPPMHY----PQYHYPGYYPPPI 69
+T P PPPP+ P P+ P+ + P P P P +Y P P YP P
Sbjct: 24 QTLPSPPPPMPYYYHSPPPPPKKKPYYYHSPPPPP-PKKPYYYHSPPPPPKKPYKYPSP- 197
Query: 70 PMPHHHHPHPHPHPHMDPAWVSRYYPCGP----VVNQPAPFVEH 109
P P H +PHPHPHPH P +V P P + P P V H
Sbjct: 198 PPPVHPYPHPHPHPH--PPYVYHSPPPPPKKPYYYHSPPPPVHH 323
>TC207021 similar to UP|Q940Z6 (Q940Z6) At1g12810/F13K23_4, partial (51%)
Length = 710
Score = 59.7 bits (143), Expect = 2e-09
Identities = 35/97 (36%), Positives = 41/97 (42%), Gaps = 19/97 (19%)
Frame = +3
Query: 19 SRRTHPPP------PPPVTPQPEIAPHQFVYP--------GAAPYPNPPMHYPQYHYPGY 64
S +HPPP PPP P PH+ P G P P PP P Y GY
Sbjct: 93 SHESHPPPGYGSPYPPPQPGYPSAPPHEGYPPPPPPPHGYGGYPPPQPPQRPPYDSYQGY 272
Query: 65 Y----PPPIPMPHHHHPH-PHPHPHMDPAWVSRYYPC 96
+ PPP P PH+H+ H H H H +P S C
Sbjct: 273 FDNGHPPPPPPPHYHYQHVDHHHHHEEPGCFSFLRGC 383
>TC224968 similar to UP|Q39835 (Q39835) Extensin, partial (44%)
Length = 681
Score = 59.7 bits (143), Expect = 2e-09
Identities = 34/76 (44%), Positives = 39/76 (50%)
Frame = +3
Query: 23 HPPPPPPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIPMPHHHHPHPHPH 82
H PPPPP +P Y +P P PP P Y++ PPP P PH H PHPHPH
Sbjct: 423 HSPPPPPPKKKP--------YYYHSPPPPPPKKKPYYYHSP--PPPHPYPHPH-PHPHPH 569
Query: 83 PHMDPAWVSRYYPCGP 98
PH P +V YP P
Sbjct: 570 PH--PPYV---YPSPP 602
Score = 55.5 bits (132), Expect = 4e-08
Identities = 28/64 (43%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +3
Query: 23 HPPPPPPVTPQPEIAPH-----QFVYPGAAPYPNPPMHYPQYHYPGYYPPPIPMPHHHHP 77
H PPPP P P PH +VYP P P P YP PPP P HH+P
Sbjct: 513 HSPPPPHPYPHPHPHPHPHPHPPYVYPSPPPPPKKPYKYPS-------PPP---PVHHYP 662
Query: 78 HPHP 81
HPHP
Sbjct: 663 HPHP 674
Score = 53.1 bits (126), Expect = 2e-07
Identities = 29/73 (39%), Positives = 36/73 (48%), Gaps = 12/73 (16%)
Frame = +3
Query: 23 HPPPPPPVTPQPEI-----APHQFVYPGAAPYPNPPMHYPQYHYPGYYPPP-------IP 70
H PPPPP +P PH + +P P+P+P +P Y YP PPP P
Sbjct: 468 HSPPPPPPKKKPYYYHSPPPPHPYPHPHPHPHPHP---HPPYVYPSPPPPPKKPYKYPSP 638
Query: 71 MPHHHHPHPHPHP 83
P HH +PHPHP
Sbjct: 639 PPPVHH-YPHPHP 674
Score = 43.1 bits (100), Expect = 2e-04
Identities = 31/101 (30%), Positives = 43/101 (41%), Gaps = 15/101 (14%)
Frame = +3
Query: 24 PPPP---PPVTP-----QPEIAPHQFVY---PGAAPYPNPPMHYPQYHY----PGYYPPP 68
PPPP PPV+P P P + + P + P P+PP Y+Y P PPP
Sbjct: 174 PPPPKKYPPVSPPYHYPSPPPPPKYYYHSPPPPSPPPPSPPPPKKPYYYHSPPPPSPPPP 353
Query: 69 IPMPHHHHPHPHPHPHMDPAWVSRYYPCGPVVNQPAPFVEH 109
P+++H P P P P Y+ P + P+ H
Sbjct: 354 YKKPYYYHSPPPPSP--PPPKPYYYHSPPPPPPKKKPYYYH 470
Score = 41.6 bits (96), Expect = 5e-04
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = +3
Query: 35 EIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIPMPHHHHPHP--HPHPHMDPAWVSR 92
+I ++Y P P P YHYP PPP P ++H P P P P P
Sbjct: 141 QILADNYLYSSPPPPKKYPPVSPPYHYPS--PPPPPKYYYHSPPPPSPPPPSPPPPKKPY 314
Query: 93 YYPCGPVVNQPAPF 106
YY P + P P+
Sbjct: 315 YYHSPPPPSPPPPY 356
>BQ080447 similar to GP|15450467|gb| At1g12810/F13K23_4 {Arabidopsis
thaliana}, partial (36%)
Length = 397
Score = 57.4 bits (137), Expect = 1e-08
Identities = 34/96 (35%), Positives = 42/96 (43%), Gaps = 18/96 (18%)
Frame = +3
Query: 19 SRRTHPPP------PPPVTPQPEIAPHQFVYP-------GAAPYPNPPMHYPQYHYPGYY 65
S ++PPP PPP P PH+ P G P P+PP P Y GY+
Sbjct: 15 SHESYPPPGHGSPYPPPQPGYPSAPPHEGYPPPPPPPGYGGYPPPHPPQRPPYDSYQGYF 194
Query: 66 ----PPPIPMPHHHHPH-PHPHPHMDPAWVSRYYPC 96
PPP P PH+H+ H H H H +P S C
Sbjct: 195 DNGRPPPPPPPHYHYQHVDHHHLHDEPGCFSFLRGC 302
Score = 27.7 bits (60), Expect = 8.2
Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 17/72 (23%)
Frame = +3
Query: 56 YPQYHYPGYYPPPIP-----MPHHHHP----------HPHPHPHMDPAWVS--RYYPCGP 98
YP + YPPP P PH +P +P PHP P + S Y+ G
Sbjct: 27 YPPPGHGSPYPPPQPGYPSAPPHEGYPPPPPPPGYGGYPPPHPPQRPPYDSYQGYFDNGR 206
Query: 99 VVNQPAPFVEHQ 110
P P +Q
Sbjct: 207 PPPPPPPHYHYQ 242
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.318 0.136 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,939,503
Number of Sequences: 63676
Number of extensions: 627507
Number of successful extensions: 22394
Number of sequences better than 10.0: 1226
Number of HSP's better than 10.0 without gapping: 9144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14239
length of query: 352
length of database: 12,639,632
effective HSP length: 98
effective length of query: 254
effective length of database: 6,399,384
effective search space: 1625443536
effective search space used: 1625443536
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Medicago: description of AC148995.10