BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148970.7 - phase: 0
(548 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC208427 homologue to UP|Q9LDF6 (Q9LDF6) Clock-associated PAS pr... 575 e-164
TC211642 homologue to UP|Q94BT6 (Q94BT6) AT5g57360/MSF19_2, part... 188 5e-48
TC209310 homologue to UP|Q9M648 (Q9M648) FKF1 (Adagio 3), partia... 182 3e-46
BF325141 173 2e-43
AI966255 homologue to GP|28193646|gb| F-box protein ZEITLUPE {Br... 152 4e-37
TC234856 homologue to UP|Q94BT6 (Q94BT6) AT5g57360/MSF19_2, part... 151 6e-37
TC232366 similar to UP|Q6UEI5 (Q6UEI5) ZEITLUPE, partial (18%) 99 4e-21
AI960991 97 1e-20
TC207695 weakly similar to UP|Q945N7 (Q945N7) AT5g04420/T32M21_2... 89 7e-18
BE660680 similar to GP|14532556|gb| AT5g57360/MSF19_2 {Arabidops... 70 7e-16
BE556248 similar to GP|14495224|db P0682B08.13 {Oryza sativa (ja... 70 3e-12
BE660669 68 1e-11
TC213795 49 4e-06
TC212025 similar to UP|Q8H934 (Q8H934) Phototropin, partial (27%) 49 8e-06
TC229223 similar to UP|Q9XI00 (Q9XI00) F8K7.20 protein (At1g2176... 40 0.002
TC204897 similar to UP|Q8W419 (Q8W419) Twin LOV protein 1, parti... 40 0.003
BU547384 38 0.010
TC231301 weakly similar to UP|Q7XVJ7 (Q7XVJ7) OJ000126_13.14 pro... 37 0.030
TC210511 similar to UP|Q8LAD5 (Q8LAD5) F-box protein ZEITLUPE/FK... 35 0.066
TC233115 35 0.086
>TC208427 homologue to UP|Q9LDF6 (Q9LDF6) Clock-associated PAS protein ZTL
(FKF1-like protein 2) (LOV kelch protein 1) (Adagio 1)
(At5g57360/MSF19_2), partial (46%)
Length = 1228
Score = 575 bits (1482), Expect = e-164
Identities = 271/285 (95%), Positives = 277/285 (97%)
Frame = +3
Query: 264 DLNSNNPEWQHVQVSSPPPGRWGHTLSCVNGSRLVVFGGCGTQGLLNDVFVLDLDATPPT 323
+LNS+NPEWQHVQVSSPPPGRWGHTLSCVNGS LVVFGGCG QGLLNDVFVLDLDA PPT
Sbjct: 3 ELNSSNPEWQHVQVSSPPPGRWGHTLSCVNGSHLVVFGGCGRQGLLNDVFVLDLDAKPPT 182
Query: 324 WREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDMSMENPVWREIPVT 383
WREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLD+SME PVWREIPV
Sbjct: 183 WREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPVA 362
Query: 384 WTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEDEPCWRCVTGSGMPG 443
WTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSE+EPCWRCVTGSGMPG
Sbjct: 363 WTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPCWRCVTGSGMPG 542
Query: 444 AGNPEGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPG 503
AGNP GIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPG
Sbjct: 543 AGNPGGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPG 722
Query: 504 RPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSDLHELSLANSVI 548
PPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLS+LHELSLA+S I
Sbjct: 723 CPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLASSAI 857
Score = 133 bits (335), Expect = 2e-31
Identities = 89/267 (33%), Positives = 131/267 (48%), Gaps = 16/267 (5%)
Frame = +3
Query: 237 ACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSNNPEWQHVQVSSPPPGRWGHTLSCVNGSR 296
+C G+ +V+FGG G +ND FVLDL++ P W+ + +PP R H+ ++G++
Sbjct: 81 SCVNGSHLVVFGGCG-RQGLLNDVFVLDLDAKPPTWREISGLAPPLPRSWHSSCTLDGTK 257
Query: 297 LVVFGGCGTQG-LLNDVFVLDLDATPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGC 355
L+V GGC G LL+D F+LDL P WREI P R H+ G K+++ GG
Sbjct: 258 LIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPVAWTPPSRLGHTLSVYGGRKILMFGGL 437
Query: 356 ADSGVL---LSDTFLLDMSMENPVWREI----------PVTWTPPSRLGHTLSVYGGRKI 402
A SG L SD F +D+S E P WR + P PP RL H G +I
Sbjct: 438 AKSGPLRFRSSDVFTMDLSEEEPCWRCVTGSGMPGAGNPGGIAPPPRLDHVAVSLPGGRI 617
Query: 403 LMFGGLAKSGPLRFRSSDVFTMDLSEDEPCWRCVTGSGMPGAGNPEGIAPPPRL--DHVA 460
L+FGG +S ++ +D ++++P WR + +PG PPR H
Sbjct: 618 LIFGGSVAG---LHSASQLYILDPTDEKPTWRIL---NVPGC--------PPRFAWGHST 755
Query: 461 VSLPGGRILIFGGSVAGLHSASQLYIL 487
+ G R ++ GG S+L+ L
Sbjct: 756 CVVGGTRAIVLGGQTGEEWMLSELHEL 836
Score = 111 bits (278), Expect = 7e-25
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 16/205 (7%)
Frame = +3
Query: 219 WRKLTVGGGVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSNNPEWQHVQVS 278
WR+++ P + S G ++++ GG + ++DTF+LDL+ P W+ + V+
Sbjct: 183 WREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPVA 362
Query: 279 SPPPGRWGHTLSCVNGSRLVVFGGCGTQGLL----NDVFVLDLDATPPTWREIS------ 328
PP R GHTLS G ++++FGG G L +DVF +DL P WR ++
Sbjct: 363 WTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPCWRCVTGSGMPG 542
Query: 329 -----GLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDMSMENPVWREIPVT 383
G+APP PR H + +L G ++++ GG S ++LD + E P WR + V
Sbjct: 543 AGNPGGIAPP-PRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVP 719
Query: 384 WTPPS-RLGHTLSVYGGRKILMFGG 407
PP GH+ V GG + ++ GG
Sbjct: 720 GCPPRFAWGHSTCVVGGTRAIVLGG 794
>TC211642 homologue to UP|Q94BT6 (Q94BT6) AT5g57360/MSF19_2, partial (15%)
Length = 392
Score = 188 bits (478), Expect = 5e-48
Identities = 89/92 (96%), Positives = 92/92 (99%)
Frame = +2
Query: 456 LDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTC 515
LDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTC
Sbjct: 2 LDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTC 181
Query: 516 VVGGTRAIVLGGQTGEEWMLSDLHELSLANSV 547
VVGGTRAIV+GGQTGEEWMLS+LHELSLA+SV
Sbjct: 182 VVGGTRAIVMGGQTGEEWMLSELHELSLASSV 277
Score = 53.1 bits (126), Expect = 3e-07
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +2
Query: 241 GNRVVLFGGEGVNMQPMNDTFVLDLNSNNPEWQHVQVSSPPPG-RWGHTLSCVNGSRLVV 299
G R+++FGG + + ++LD P W+ + V PP WGH+ V G+R +V
Sbjct: 29 GGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIV 208
Query: 300 FGG-CGTQGLLNDVFVLDLDATPPTWREISGLA 331
GG G + +L+++ L L ++ + I+G A
Sbjct: 209 MGGQTGEEWMLSELHELSLASSVS*TQLINGHA 307
Score = 46.2 bits (108), Expect = 4e-05
Identities = 28/88 (31%), Positives = 46/88 (51%), Gaps = 3/88 (3%)
Frame = +2
Query: 287 HTLSCVNGSRLVVFGGCGTQGL--LNDVFVLDLDATPPTWREISGLAPPLPRSW-HSSCT 343
H + G R+++FGG GL + +++LD PTWR ++ P +W HS+C
Sbjct: 8 HVAVSLPGGRILIFGG-SVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTCV 184
Query: 344 LDGTKLIVSGGCADSGVLLSDTFLLDMS 371
+ GT+ IV GG +LS+ L ++
Sbjct: 185 VGGTRAIVMGGQTGEEWMLSELHELSLA 268
Score = 43.1 bits (100), Expect = 3e-04
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 339 HSSCTLDGTKLIVSGGCADSGVLLSDTFLLDMSMENPVWREIPVTWTPPS-RLGHTLSVY 397
H + +L G ++++ GG S ++LD + E P WR + V PP GH+ V
Sbjct: 8 HVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTCVV 187
Query: 398 GGRKILMFGG 407
GG + ++ GG
Sbjct: 188 GGTRAIVMGG 217
>TC209310 homologue to UP|Q9M648 (Q9M648) FKF1 (Adagio 3), partial (16%)
Length = 655
Score = 182 bits (462), Expect = 3e-46
Identities = 79/118 (66%), Positives = 100/118 (83%)
Frame = +1
Query: 428 EDEPCWRCVTGSGMPGAGNPEGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYIL 487
+++P WR + S G + + PPPRLDHVAVS+P GRI+IFGGS+AGLHS SQL++L
Sbjct: 4 DEQPQWRQLEYSAFTGLASQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLL 183
Query: 488 DPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSDLHELSLAN 545
DP++EKP+WRILNVPG+PP+FAWGHSTCVVGGTR +VLGG TGEEW+L++LHEL LA+
Sbjct: 184 DPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLAS 357
Score = 53.5 bits (127), Expect = 2e-07
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Frame = +1
Query: 228 VEPSRCNFSACAVG-NRVVLFGGEGVNMQPMNDTFVLDLNSNNPEWQHVQV-SSPPPGRW 285
V P R + A ++ R+++FGG + + F+LD + P W+ + V PP W
Sbjct: 73 VPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAW 252
Query: 286 GHTLSCVNGSRLVVFGG-CGTQGLLNDVFVLDL 317
GH+ V G+R++V GG G + +LN++ L L
Sbjct: 253 GHSTCVVGGTRVLVLGGHTGEEWILNELHELCL 351
Score = 50.8 bits (120), Expect = 2e-06
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Frame = +1
Query: 322 PTWREI-----SGLAP-----PLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDMS 371
P WR++ +GLA P PR H + ++ ++I+ GG S FLLD S
Sbjct: 13 PQWRQLEYSAFTGLASQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPS 192
Query: 372 MENPVWREIPVTWTPPS-RLGHTLSVYGGRKILMFGG 407
E P WR + V PP GH+ V GG ++L+ GG
Sbjct: 193 EEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGG 303
Score = 40.8 bits (94), Expect = 0.002
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 10/111 (9%)
Frame = +1
Query: 373 ENPVWREIPVTW----------TPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVF 422
E P WR++ + PP RL H +I++FGG S +F
Sbjct: 7 EQPQWRQLEYSAFTGLASQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAG---LHSPSQLF 177
Query: 423 TMDLSEDEPCWRCVTGSGMPGAGNPEGIAPPPRLDHVAVSLPGGRILIFGG 473
+D SE++P WR + G P P H + G R+L+ GG
Sbjct: 178 LLDPSEEKPSWRILNVPGQP---------PKFAWGHSTCVVGGTRVLVLGG 303
>BF325141
Length = 405
Score = 173 bits (439), Expect = 2e-43
Identities = 78/124 (62%), Positives = 97/124 (77%)
Frame = +2
Query: 348 KLIVSGGCADSGVLLSDTFLLDMSMENPVWREIPVTWTPPSRLGHTLSVYGGRKILMFGG 407
KL+VSGGC D+GVLLSDT+LLD++ +NP WREIP +W PPSRLGH+LSVYG KILMFGG
Sbjct: 2 KLVVSGGCTDAGVLLSDTYLLDLTTDNPTWREIPTSWAPPSRLGHSLSVYGRTKILMFGG 181
Query: 408 LAKSGPLRFRSSDVFTMDLSEDEPCWRCVTGSGMPGAGNPEGIAPPPRLDHVAVSLPGGR 467
LAKSG LR RS + +T+DL +++P WR + S G + + PPPRLDHVAV +P GR
Sbjct: 182 LAKSGHLRLRSGEAYTIDLEDEQPQWRQLEYSAFTGLASQSAVVPPPRLDHVAVXMPCGR 361
Query: 468 ILIF 471
I+IF
Sbjct: 362 IIIF 373
Score = 65.9 bits (159), Expect = 5e-11
Identities = 43/124 (34%), Positives = 60/124 (47%), Gaps = 14/124 (11%)
Frame = +2
Query: 296 RLVVFGGCGTQG-LLNDVFVLDLDATPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGG 354
+LVV GGC G LL+D ++LDL PTWREI P R HS TK+++ GG
Sbjct: 2 KLVVSGGCTDAGVLLSDTYLLDLTTDNPTWREIPTSWAPPSRLGHSLSVYGRTKILMFGG 181
Query: 355 CADSGVL---LSDTFLLDMSMENPVWREIPVT----------WTPPSRLGHTLSVYGGRK 401
A SG L + + +D+ E P WR++ + PP RL H +
Sbjct: 182 LAKSGHLRLRSGEAYTIDLEDEQPQWRQLEYSAFTGLASQSAVVPPPRLDHVAVXMPCGR 361
Query: 402 ILMF 405
I++F
Sbjct: 362 IIIF 373
Score = 65.1 bits (157), Expect = 8e-11
Identities = 34/109 (31%), Positives = 60/109 (54%), Gaps = 14/109 (12%)
Frame = +2
Query: 257 MNDTFVLDLNSNNPEWQHVQVSSPPPGRWGHTLSCVNGSRLVVFGGCGTQGLL----NDV 312
++DT++LDL ++NP W+ + S PP R GH+LS +++++FGG G L +
Sbjct: 44 LSDTYLLDLTTDNPTWREIPTSWAPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEA 223
Query: 313 FVLDLDATPPTWREI-----SGLAP-----PLPRSWHSSCTLDGTKLIV 351
+ +DL+ P WR++ +GLA P PR H + + ++I+
Sbjct: 224 YTIDLEDEQPQWRQLEYSAFTGLASQSAVVPPPRLDHVAVXMPCGRIII 370
Score = 52.4 bits (124), Expect = 5e-07
Identities = 34/102 (33%), Positives = 48/102 (46%), Gaps = 3/102 (2%)
Frame = +2
Query: 401 KILMFGGLAKSGPLRFRSSDVFTMDLSEDEPCWRCVTGSGMPGAGNPEGIAPPPRLDHVA 460
K+++ GG +G L SD + +DL+ D P WR + P APP RL H
Sbjct: 2 KLVVSGGCTDAGVLL---SDTYLLDLTTDNPTWREI----------PTSWAPPSRLGHSL 142
Query: 461 VSLPGGRILIFGGSVAGLH---SASQLYILDPTDEKPTWRIL 499
+IL+FGG H + + Y +D DE+P WR L
Sbjct: 143 SVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEQPQWRQL 268
Score = 40.4 bits (93), Expect = 0.002
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +2
Query: 467 RILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLG 526
++++ GG S Y+LD T + PTWR + PP GHS V G T+ ++ G
Sbjct: 2 KLVVSGGCTDAGVLLSDTYLLDLTTDNPTWREIPTSWAPPS-RLGHSLSVYGRTKILMFG 178
Query: 527 G 527
G
Sbjct: 179 G 181
>AI966255 homologue to GP|28193646|gb| F-box protein ZEITLUPE {Brassica rapa
subsp. pekinensis}, partial (50%)
Length = 241
Score = 152 bits (384), Expect = 4e-37
Identities = 72/80 (90%), Positives = 74/80 (92%)
Frame = +2
Query: 335 PRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDMSMENPVWREIPVTWTPPSRLGHTL 394
PRSWHSS +LDGTKLI SG CADSGVL SDTFLLD+SME PVWREIPV WTPPSRLGHTL
Sbjct: 2 PRSWHSSISLDGTKLIASGVCADSGVLPSDTFLLDLSMEKPVWREIPVAWTPPSRLGHTL 181
Query: 395 SVYGGRKILMFGGLAKSGPL 414
SVYGGRKILMFGGLAKSGPL
Sbjct: 182 SVYGGRKILMFGGLAKSGPL 241
Score = 54.3 bits (129), Expect = 1e-07
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 258 NDTFVLDLNSNNPEWQHVQVSSPPPGRWGHTLSCVNGSRLVVFGGCGTQGLL 309
+DTF+LDL+ P W+ + V+ PP R GHTLS G ++++FGG G L
Sbjct: 86 SDTFLLDLSMEKPVWREIPVAWTPPSRLGHTLSVYGGRKILMFGGLAKSGPL 241
Score = 53.9 bits (128), Expect = 2e-07
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 282 PGRWGHTLSCVNGSRLVVFGGCGTQGLL-NDVFVLDLDATPPTWREISGLAPPLPRSWHS 340
P W ++S ++G++L+ G C G+L +D F+LDL P WREI P R H+
Sbjct: 2 PRSWHSSIS-LDGTKLIASGVCADSGVLPSDTFLLDLSMEKPVWREIPVAWTPPSRLGHT 178
Query: 341 SCTLDGTKLIVSGGCADSGVL 361
G K+++ GG A SG L
Sbjct: 179 LSVYGGRKILMFGGLAKSGPL 241
Score = 44.7 bits (104), Expect = 1e-04
Identities = 25/74 (33%), Positives = 38/74 (50%)
Frame = +2
Query: 454 PRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHS 513
PR H ++SL G +++ G S ++LD + EKP WR + V PP GH+
Sbjct: 2 PRSWHSSISLDGTKLIASGVCADSGVLPSDTFLLDLSMEKPVWREIPVAWTPPS-RLGHT 178
Query: 514 TCVVGGTRAIVLGG 527
V GG + ++ GG
Sbjct: 179 LSVYGGRKILMFGG 220
Score = 44.3 bits (103), Expect = 1e-04
Identities = 30/85 (35%), Positives = 39/85 (45%)
Frame = +2
Query: 389 RLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEDEPCWRCVTGSGMPGAGNPE 448
R H+ G K++ G A SG L SD F +DLS ++P WR + P
Sbjct: 5 RSWHSSISLDGTKLIASGVCADSGVL---PSDTFLLDLSMEKPVWREI----------PV 145
Query: 449 GIAPPPRLDHVAVSLPGGRILIFGG 473
PP RL H G +IL+FGG
Sbjct: 146 AWTPPSRLGHTLSVYGGRKILMFGG 220
>TC234856 homologue to UP|Q94BT6 (Q94BT6) AT5g57360/MSF19_2, partial (13%)
Length = 491
Score = 151 bits (382), Expect = 6e-37
Identities = 73/80 (91%), Positives = 75/80 (93%), Gaps = 3/80 (3%)
Frame = +2
Query: 416 FRSSDVFTMDLSEDEPCWRCVTGSGMPG---AGNPEGIAPPPRLDHVAVSLPGGRILIFG 472
FRSSDVFTMDLSE+EPCWRCVTGSG+PG GNP GIAPPPRLDHVAVSLPGGRILIFG
Sbjct: 17 FRSSDVFTMDLSEEEPCWRCVTGSGLPGLPGTGNPGGIAPPPRLDHVAVSLPGGRILIFG 196
Query: 473 GSVAGLHSASQLYILDPTDE 492
GSVAGLHSASQLYILDPTDE
Sbjct: 197 GSVAGLHSASQLYILDPTDE 256
Score = 36.6 bits (83), Expect = 0.030
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 13/62 (20%)
Frame = +2
Query: 359 GVLLSDTFLLDMSMENPVWREI-------------PVTWTPPSRLGHTLSVYGGRKILMF 405
G SD F +D+S E P WR + P PP RL H G +IL+F
Sbjct: 14 GFRSSDVFTMDLSEEEPCWRCVTGSGLPGLPGTGNPGGIAPPPRLDHVAVSLPGGRILIF 193
Query: 406 GG 407
GG
Sbjct: 194 GG 199
Score = 36.2 bits (82), Expect = 0.039
Identities = 23/78 (29%), Positives = 37/78 (46%), Gaps = 14/78 (17%)
Frame = +2
Query: 310 NDVFVLDLDATPPTWREIS--------------GLAPPLPRSWHSSCTLDGTKLIVSGGC 355
+DVF +DL P WR ++ G+APP PR H + +L G ++++ GG
Sbjct: 26 SDVFTMDLSEEEPCWRCVTGSGLPGLPGTGNPGGIAPP-PRLDHVAVSLPGGRILIFGGS 202
Query: 356 ADSGVLLSDTFLLDMSME 373
S ++LD + E
Sbjct: 203 VAGLHSASQLYILDPTDE 256
Score = 31.6 bits (70), Expect = 0.95
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 15/74 (20%)
Frame = +2
Query: 258 NDTFVLDLNSNNPEWQHVQVSS-------------PPPGRWGHTLSCVNGSRLVVFGGCG 304
+D F +DL+ P W+ V S PP R H + G R+++FGG
Sbjct: 26 SDVFTMDLSEEEPCWRCVTGSGLPGLPGTGNPGGIAPPPRLDHVAVSLPGGRILIFGG-S 202
Query: 305 TQGL--LNDVFVLD 316
GL + +++LD
Sbjct: 203 VAGLHSASQLYILD 244
Score = 31.2 bits (69), Expect = 1.2
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 18/85 (21%)
Frame = +2
Query: 481 ASQLYILDPTDEKPTWRIL---NVPGRP---------PRFAWGHSTCVVGGTRAIVLGG- 527
+S ++ +D ++E+P WR + +PG P P H + G R ++ GG
Sbjct: 23 SSDVFTMDLSEEEPCWRCVTGSGLPGLPGTGNPGGIAPPPRLDHVAVSLPGGRILIFGGS 202
Query: 528 -----QTGEEWMLSDLHELSLANSV 547
+ ++L ELSLA+SV
Sbjct: 203 VAGLHSASQLYILDPTDELSLASSV 277
>TC232366 similar to UP|Q6UEI5 (Q6UEI5) ZEITLUPE, partial (18%)
Length = 592
Score = 99.4 bits (246), Expect = 4e-21
Identities = 43/50 (86%), Positives = 50/50 (100%)
Frame = +2
Query: 14 RFLQCRGPFAKRRHPLVDSSVISEIRKCIDEGVEFQGELLNFRKDGSPLM 63
RFLQCRGPFAKRRHPLVDS+V+SEIR+C++EG+EFQGE+LNFRKDGSPLM
Sbjct: 443 RFLQCRGPFAKRRHPLVDSTVVSEIRRCLEEGIEFQGEVLNFRKDGSPLM 592
>AI960991
Length = 436
Score = 97.4 bits (241), Expect = 1e-20
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +3
Query: 14 RFLQCRGPFAKRRHPLVDSSVISEIRKCIDEGVEFQGELLNFRKDGSPLMNRLRLTPIY 72
RFLQ R P A+RRHPLVD V+SEIR+C++EGVEFQGELLNFRKDG+PL+NRLRL PI+
Sbjct: 258 RFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGVEFQGELLNFRKDGTPLVNRLRLAPIH 434
>TC207695 weakly similar to UP|Q945N7 (Q945N7) AT5g04420/T32M21_20, partial
(87%)
Length = 2070
Score = 88.6 bits (218), Expect = 7e-18
Identities = 73/233 (31%), Positives = 108/233 (46%), Gaps = 10/233 (4%)
Frame = +1
Query: 185 WGSETTRVLETVPGAKRLGWGRLARELTTLEAAAWRKLTVGGGVEPSRCNFSACAVGNRV 244
WG + L + G R L +E + + G V +R SA G+RV
Sbjct: 421 WGEK----LLLLGGNSRESSAELTVRYIDIETCQFGVIKTSGDVPVARVGQSASLFGSRV 588
Query: 245 VLFGGEGVNMQPMNDTFVLDLNSNNPEWQHVQVSSPPPG-RWGHTLSCVNGSRLVVFGGC 303
+LFGGE ++ + +ND VLDL S W+ ++ + PP R+ H+ + L++FGGC
Sbjct: 589 ILFGGEEMSRKLLNDVHVLDLESMT--WEMIKTTQTPPAPRYDHSAAIQGERYLLIFGGC 762
Query: 304 GTQGLLNDVFVLDLD----ATPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSG 359
ND+ +LD+ + P T ++ PR+ H+ T+D + LIV GG SG
Sbjct: 763 SHSIFFNDLHLLDMQTMEWSQPQTQGDLVS-----PRAGHTGITIDESWLIVGGGDNRSG 927
Query: 360 VLLSDTFLLDMSMENPVWREIPVTWTPPSRLGHTLSV----YGGRK-ILMFGG 407
+T +LDMS VW + V LSV GG K +L FGG
Sbjct: 928 --CPETLVLDMS--KLVWSVLTVVKQKDPLSSEGLSVCSATIGGEKYLLAFGG 1074
Score = 53.1 bits (126), Expect = 3e-07
Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 12/229 (5%)
Frame = +1
Query: 327 ISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDMSMENPVWREIPVTWTP 386
+SG A P R H++ +D KL ++GG + +G LSD + D+ + W + +
Sbjct: 190 VSG-ARPAARYKHAAAVVD-EKLYIAGG-SRNGRHLSDVQVFDL--RSLTWSSLKLKANV 354
Query: 387 ------------PSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEDEPCWR 434
P+ GH + + G K+L+ GG ++ SS T+ + E C
Sbjct: 355 RKDDDDSSQEILPATSGHNM-IRWGEKLLLLGGNSRE------SSAELTVRYIDIETC-- 507
Query: 435 CVTGSGMPGAGNPEGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKP 494
G G P R+ A SL G R+++FGG + +++LD E
Sbjct: 508 ------QFGVIKTSGDVPVARVGQSA-SLFGSRVILFGGEEMSRKLLNDVHVLDL--ESM 660
Query: 495 TWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSDLHELSL 543
TW ++ PP + HS + G ++ GG +DLH L +
Sbjct: 661 TWEMIKTTQTPPAPRYDHSAAIQGERYLLIFGG-CSHSIFFNDLHLLDM 804
>BE660680 similar to GP|14532556|gb| AT5g57360/MSF19_2 {Arabidopsis
thaliana}, partial (15%)
Length = 455
Score = 70.1 bits (170), Expect(2) = 7e-16
Identities = 31/37 (83%), Positives = 35/37 (93%)
Frame = +2
Query: 14 RFLQCRGPFAKRRHPLVDSSVISEIRKCIDEGVEFQG 50
RFLQCRGPFAKRRHPLVDS+V+SEI + +DEGVEFQG
Sbjct: 299 RFLQCRGPFAKRRHPLVDSTVVSEIXRXLDEGVEFQG 409
Score = 32.0 bits (71), Expect(2) = 7e-16
Identities = 14/24 (58%), Positives = 18/24 (74%)
Frame = +3
Query: 42 IDEGVEFQGELLNFRKDGSPLMNR 65
+ +G+ + LLNF KDGSPLMNR
Sbjct: 384 LTKGLNSKVXLLNFXKDGSPLMNR 455
>BE556248 similar to GP|14495224|db P0682B08.13 {Oryza sativa (japonica
cultivar-group)}, partial (19%)
Length = 420
Score = 69.7 bits (169), Expect = 3e-12
Identities = 49/131 (37%), Positives = 67/131 (50%), Gaps = 3/131 (2%)
Frame = +2
Query: 214 LEAAAWRKLTVGGGVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSNNPEWQ 273
LE W KL G R + SA VG+++++FGG ++ +NDT +LDL + EW
Sbjct: 35 LEKMDWSKLATTGEKPGPRDSHSAVLVGHKMIVFGGTN-GLKKVNDTHILDLVTK--EWF 205
Query: 274 HVQVSSPPPG-RWGHTLSCVNGSRLVVFGGC--GTQGLLNDVFVLDLDATPPTWREISGL 330
+ PP R HT + V RLV+FGG G LND+ VLDL T + G
Sbjct: 206 RPKCEGTPPSPRESHTATLVGDERLVIFGGSGEGEANYLNDLHVLDLRTMRWTSPTVKG- 382
Query: 331 APPLPRSWHSS 341
P+PR HS+
Sbjct: 383 DFPVPRDSHST 415
Score = 48.5 bits (114), Expect = 8e-06
Identities = 34/131 (25%), Positives = 58/131 (43%), Gaps = 1/131 (0%)
Frame = +2
Query: 262 VLDLNSNNPEWQHVQVSSPPPGRWGHTLSCVNGSRLVVFGGCGTQGLLNDVFVLDLDATP 321
VL L+ +W + + PG + + G +++VFGG +ND +LDL T
Sbjct: 20 VLCLDLEKMDWSKLATTGEKPGPRDSHSAVLVGHKMIVFGGTNGLKKVNDTHILDL-VTK 196
Query: 322 PTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGV-LLSDTFLLDMSMENPVWREI 380
+R PP PR H++ + +L++ GG + L+D +LD+
Sbjct: 197 EWFRPKCEGTPPSPRESHTATLVGDERLVIFGGSGEGEANYLNDLHVLDLR--------- 349
Query: 381 PVTWTPPSRLG 391
+ WT P+ G
Sbjct: 350 TMRWTSPTVKG 382
Score = 40.0 bits (92), Expect = 0.003
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Frame = +2
Query: 367 LLDMSMENPVWREIPVTWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDL 426
+L + +E W ++ T P +V G K+++FGG + L+ + +D +DL
Sbjct: 20 VLCLDLEKMDWSKLATTGEKPGPRDSHSAVLVGHKMIVFGG---TNGLK-KVNDTHILDL 187
Query: 427 SEDEPCW---RCVTGSGMPGAGNPEGIAPPPRLDHVAVSLPGGRILIFGGSVAG-LHSAS 482
E W +C EG P PR H A + R++IFGGS G + +
Sbjct: 188 VTKE--WFRPKC------------EGTPPSPRESHTATLVGDERLVIFGGSGEGEANYLN 325
Query: 483 QLYILDPTDEKPTWRILNVPGRPPRFAWGHST 514
L++LD + W V G P HST
Sbjct: 326 DLHVLDLRTMR--WTSPTVKGDFPVPRDSHST 415
>BE660669
Length = 636
Score = 67.8 bits (164), Expect = 1e-11
Identities = 41/110 (37%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +2
Query: 219 WRKLTVGGGVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSNNPEWQHVQVS 278
W ++T G R A AVG VV+ GG G D VLDL P W V V
Sbjct: 197 WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSVQ 376
Query: 279 SPPPG-RWGHTLSCVNGSRLVVFGGCGTQGLLNDVFVLDLDATPPTWREI 327
P PG R+GH ++ V L+ GG + L DV+ LD A P WR++
Sbjct: 377 GPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 526
Score = 59.3 bits (142), Expect = 4e-09
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 1/159 (0%)
Frame = +2
Query: 387 PSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEDEPCWRCVTGSGMPGAGN 446
P +G L ++GG L A P ++ + + D C+ +T
Sbjct: 38 PGYIGPRLILFGGATALEGNSAATGTPSSAGNAGIRLAGATADVHCYDVLTNKW--SRIT 211
Query: 447 PEGIAPPPRLDHVAVSLPGGRILIFGG-SVAGLHSASQLYILDPTDEKPTWRILNVPGRP 505
P G P PR HVA ++ G ++I GG AGL SA L++LD T + P W ++V G
Sbjct: 212 PFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGL-SAEDLHVLDLTQQWPRWHRVSVQGPG 385
Query: 506 PRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSDLHELSLA 544
P +GH +VG + +GG G+ L+D+ L A
Sbjct: 386 PGPRYGHVMALVGQRYLMAIGGNDGKR-PLADVWALDTA 499
Score = 48.5 bits (114), Expect = 8e-06
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 23/164 (14%)
Frame = +2
Query: 240 VGNRVVLFGGE-------------------GVNMQPMN-DTFVLDLNSNNPEWQHVQ-VS 278
+G R++LFGG G+ + D D+ +N +W +
Sbjct: 47 IGPRLILFGGATALEGNSAATGTPSSAGNAGIRLAGATADVHCYDVLTN--KWSRITPFG 220
Query: 279 SPPPGRWGHTLSCVNGSRLVVFGGCGTQGL-LNDVFVLDLDATPPTWREISGLAP-PLPR 336
PP R H + V G+ +V+ GG G GL D+ VLDL P W +S P P PR
Sbjct: 221 EPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSVQGPGPGPR 397
Query: 337 SWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDMSMENPVWREI 380
H L G + +++ G D L+D + LD + + WR++
Sbjct: 398 YGH-VMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 526
>TC213795
Length = 631
Score = 49.3 bits (116), Expect = 4e-06
Identities = 53/212 (25%), Positives = 83/212 (39%), Gaps = 9/212 (4%)
Frame = +2
Query: 271 EWQHVQVSSP-PPGRWGHTLSCVNGSRLVVFGGCGTQGLLNDVFVLDLDATPPTWREI-- 327
+W VS P R+ H + V +L ++GG LND+ VLDL + TW +I
Sbjct: 32 QWVAPPVSGQRPKARYEHGAAVVQ-DKLYIYGGNHNGRYLNDLHVLDLRSW--TWSKIEA 202
Query: 328 ------SGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDMSMENPVWREIP 381
+ + P + HS + L ++G D + + + N W +
Sbjct: 203 EVVESTNSSSITFPCAGHSLIPWENKLLSIAGHTKDPNESIQ---VKVFDLPNATWTTLK 373
Query: 382 VTWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEDEPCWRCVTGSGM 441
PP G + G +++FGG R +D+ +DL + W + G+
Sbjct: 374 TYGKPPVSRGGQSVTFVGTSLVIFGG---EDAKRTLLNDLHILDL--ETMTWDEIDAVGV 538
Query: 442 PGAGNPEGIAPPPRLDHVAVSLPGGRILIFGG 473
P P PR DH A +LIFGG
Sbjct: 539 P---------PSPRSDHAAAVHVERYLLIFGG 607
Score = 49.3 bits (116), Expect = 4e-06
Identities = 48/161 (29%), Positives = 73/161 (44%), Gaps = 11/161 (6%)
Frame = +2
Query: 205 GRLARELTTLEAAAWRKLTVGGGVEPSRCNFSA---CAVGNRVV-----LFGGEGVNMQP 256
GR +L L+ +W + V S + S CA G+ ++ L G P
Sbjct: 137 GRYLNDLHVLDLRSWTWSKIEAEVVESTNSSSITFPCA-GHSLIPWENKLLSIAGHTKDP 313
Query: 257 MNDTFVLDLNSNNPEWQHVQV-SSPPPGRWGHTLSCVNGSRLVVFGG-CGTQGLLNDVFV 314
V + N W ++ PP R G +++ V G+ LV+FGG + LLND+ +
Sbjct: 314 NESIQVKVFDLPNATWTTLKTYGKPPVSRGGQSVTFV-GTSLVIFGGEDAKRTLLNDLHI 490
Query: 315 LDLDATPPTWREISGL-APPLPRSWHSSCTLDGTKLIVSGG 354
LDL+ TW EI + PP PRS H++ L++ GG
Sbjct: 491 LDLETM--TWDEIDAVGVPPSPRSDHAAAVHVERYLLIFGG 607
Score = 38.5 bits (88), Expect = 0.008
Identities = 23/77 (29%), Positives = 37/77 (47%)
Frame = +2
Query: 467 RILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLG 526
++L G + + Q+ + D + TW L G+PP G S VG T ++ G
Sbjct: 278 KLLSIAGHTKDPNESIQVKVFDLPNA--TWTTLKTYGKPPVSRGGQSVTFVG-TSLVIFG 448
Query: 527 GQTGEEWMLSDLHELSL 543
G+ + +L+DLH L L
Sbjct: 449 GEDAKRTLLNDLHILDL 499
Score = 32.3 bits (72), Expect = 0.56
Identities = 23/76 (30%), Positives = 34/76 (44%)
Frame = +2
Query: 452 PPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWG 511
PP +V+ G ++IFGG A + L+ILD E TW ++ G PP
Sbjct: 386 PPVSRGGQSVTFVGTSLVIFGGEDAKRTLLNDLHILDL--ETMTWDEIDAVGVPPSPRSD 559
Query: 512 HSTCVVGGTRAIVLGG 527
H+ V ++ GG
Sbjct: 560 HAAAVHVERYLLIFGG 607
>TC212025 similar to UP|Q8H934 (Q8H934) Phototropin, partial (27%)
Length = 978
Score = 48.5 bits (114), Expect = 8e-06
Identities = 21/56 (37%), Positives = 36/56 (63%)
Frame = +1
Query: 31 DSSVISEIRKCIDEGVEFQGELLNFRKDGSPLMNRLRLTPIYGEDDEITHVIGIQL 86
D +++IR+ + G + G LLN++KDG+P N L ++PI ED ++ IG+Q+
Sbjct: 406 DPEDVAKIREALQAGKIYCGRLLNYKKDGTPFWNLLTISPIKDEDGKVLKFIGMQV 573
>TC229223 similar to UP|Q9XI00 (Q9XI00) F8K7.20 protein (At1g21760), partial
(96%)
Length = 1096
Score = 40.4 bits (93), Expect = 0.002
Identities = 19/47 (40%), Positives = 25/47 (52%)
Frame = +1
Query: 139 LSDEVLSLKILARLTPRDIASVSSVCTRLYEVTRNEDLWRMVCQNAW 185
L DE+L ++ AR+TP D+ S VC + RN WR C AW
Sbjct: 322 LPDELL-FEVFARMTPYDLGKASCVCRKWKYTIRNPVFWRNACLKAW 459
>TC204897 similar to UP|Q8W419 (Q8W419) Twin LOV protein 1, partial (59%)
Length = 1749
Score = 40.0 bits (92), Expect = 0.003
Identities = 20/67 (29%), Positives = 35/67 (51%), Gaps = 1/67 (1%)
Frame = +2
Query: 21 PFAKRRHPLVDSSVISEIRKCIDEGVEFQGELLNFRKDGSPLMNRLRLTPIYGED-DEIT 79
P A + P + EIR+ + E Q LLN+R+DG+P R++P++ D +
Sbjct: 569 PAAIFQGPRTSRKSVIEIREAVREERNAQVVLLNYRRDGTPFWMLFRVSPVFSSDGGAVV 748
Query: 80 HVIGIQL 86
H + +Q+
Sbjct: 749 HFVAVQV 769
Score = 35.0 bits (79), Expect = 0.086
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 31 DSSVISEIRKCIDEGVEFQGELLNFRKDGSPLMNRLRLTPIYGEDDEITHVIGIQL 86
D+S + IR+ I +LN+RKD S N L ++P+ ++ + +G+Q+
Sbjct: 1238 DTSTLHLIRESIKTEQPCTVRILNYRKDKSSFWNFLHISPVRDASGKVAYFVGVQI 1405
>BU547384
Length = 537
Score = 38.1 bits (87), Expect = 0.010
Identities = 32/103 (31%), Positives = 46/103 (44%)
Frame = +3
Query: 386 PPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEDEPCWRCVTGSGMPGAG 445
P R GH+ G K+++FGGL L SD+ D+ + TGSG G
Sbjct: 177 PQRRSGHSAVNIGKSKVVVFGGLVDKKFL----SDIAVYDIEAKQWFQPECTGSGSDG-- 338
Query: 446 NPEGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILD 488
+ P R HVAV++ + IFGG + G ++LD
Sbjct: 339 ---HVGPSSRAFHVAVAI-DCHMFIFGGRL-GSQRLGDFWVLD 452
Score = 36.6 bits (83), Expect = 0.030
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +3
Query: 281 PPGRWGHTLSCVNGSRLVVFGGCGTQGLLNDVFVLDLDATPPTWREISGLAP-----PLP 335
P R GH+ + S++VVFGG + L+D+ V D++A E +G P
Sbjct: 177 PQRRSGHSAVNIGKSKVVVFGGLVDKKFLSDIAVYDIEAKQWFQPECTGSGSDGHVGPSS 356
Query: 336 RSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDMSMENPVWREI 380
R++H + +D I G L D ++LD + W E+
Sbjct: 357 RAFHVAVAIDCHMFIFGGRLGSQ--RLGDFWVLDTDIWQ--WSEL 479
>TC231301 weakly similar to UP|Q7XVJ7 (Q7XVJ7) OJ000126_13.14 protein
(OJ991214_12.2 protein), partial (10%)
Length = 770
Score = 36.6 bits (83), Expect = 0.030
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +1
Query: 139 LSDEVLSLKILARLTPRDIASVSSVCTRLYEVTRNEDLWRMVCQNAWGS----ETTRVLE 194
L +++ IL RL +AS +SV + ++ + +DLWR + W S V+
Sbjct: 184 LHSDIIHAHILTRLDGATLASAASVSSLMHRLCTQDDLWREISTATWPSLQNPIARHVIS 363
Query: 195 TVPGAKR 201
+PG R
Sbjct: 364 AIPGGYR 384
>TC210511 similar to UP|Q8LAD5 (Q8LAD5) F-box protein ZEITLUPE/FKF/LKP/ADAGIO
family, partial (19%)
Length = 641
Score = 35.4 bits (80), Expect = 0.066
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 447 PEGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILD 488
P+G++ P R+ H A + GGR+LI+GG + H ++LD
Sbjct: 16 PDGVSLP-RVGHTATLVLGGRLLIYGGENSYRHRKDDFWVLD 138
Score = 30.8 bits (68), Expect = 1.6
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 284 RWGHTLSCVNGSRLVVFGGCGT-QGLLNDVFVLDLDATP 321
R GHT + V G RL+++GG + + +D +VLD+ A P
Sbjct: 37 RVGHTATLVLGGRLLIYGGENSYRHRKDDFWVLDISAIP 153
Score = 28.5 bits (62), Expect = 8.1
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 389 RLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLS 427
R+GHT ++ G ++L++GG R R D + +D+S
Sbjct: 37 RVGHTATLVLGGRLLIYGG---ENSYRHRKDDFWVLDIS 144
>TC233115
Length = 584
Score = 35.0 bits (79), Expect = 0.086
Identities = 15/19 (78%), Positives = 17/19 (88%)
Frame = +2
Query: 530 GEEWMLSDLHELSLANSVI 548
GEEWMLS+LHELS A+S I
Sbjct: 2 GEEWMLSELHELSXASSAI 58
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.320 0.139 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,101,345
Number of Sequences: 63676
Number of extensions: 483573
Number of successful extensions: 2414
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 2283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2367
length of query: 548
length of database: 12,639,632
effective HSP length: 102
effective length of query: 446
effective length of database: 6,144,680
effective search space: 2740527280
effective search space used: 2740527280
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Medicago: description of AC148970.7