TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148965.11 + phase: 0 /pseudo
         (265 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BU081308 weakly similar to GP|2252824|gb|A A_IG005I10.1 gene pro...    27  7.2

>BU081308 weakly similar to GP|2252824|gb|A A_IG005I10.1 gene product
           {Arabidopsis thaliana}, partial (32%)
          Length = 421

 Score = 27.3 bits (59), Expect = 7.2
 Identities = 11/32 (34%), Positives = 18/32 (55%)
 Frame = -1

Query: 51  KILYICWWYLQ**VESHCQSFGIYCEYSTFHL 82
           KI+YIC+W +       C++  +YC  S  +L
Sbjct: 121 KIIYICFWDIY-----FCKNIAVYCHGSLMNL 41


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.379    0.171    0.716 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,877,074
Number of Sequences: 63676
Number of extensions: 187896
Number of successful extensions: 2558
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1867
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 676
Number of HSP's gapped (non-prelim): 1933
length of query: 265
length of database: 12,639,632
effective HSP length: 96
effective length of query: 169
effective length of database: 6,526,736
effective search space: 1103018384
effective search space used: 1103018384
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 13 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 35 (21.7 bits)
S2: 58 (26.9 bits)