TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148819.5 - phase: 0 
         (83 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AW760164 similar to GP|11994422|dbj oxidoreductase  short-chain ...    62  5e-11
TC205325 similar to UP|Q8L7S4 (Q8L7S4) At1g68060/T23K23_9, parti...    27  2.4
AW781805 weakly similar to PIR|S04684|R5P ribosomal protein L9 p...    25  5.3
BU081501                                                               25  6.9
AW133330 similar to GP|16417946|gb mevalonate kinase {Hevea bras...    25  9.1
BM525884                                                               25  9.1
BI969214                                                               25  9.1
TC231255 similar to UP|Q93ZP3 (Q93ZP3) At1g32359/F27G20.10, part...    25  9.1
TC203705 similar to UP|P93484 (P93484) BP-80 vacuolar sorting re...    25  9.1

>AW760164 similar to GP|11994422|dbj oxidoreductase  short-chain
           dehydrogenase/reductase family-like protein {Arabidopsis
           thaliana}, partial (9%)
          Length = 428

 Score = 62.0 bits (149), Expect = 5e-11
 Identities = 31/76 (40%), Positives = 47/76 (61%)
 Frame = +3

Query: 4   KWDIEKFIGDSDFGLWKVKIEVVLIQQKCAKARKGKILFSDTMSQEDKTKMADNARSFFV 63
           K+++EKF G +DFGL  +K+  +L+QQ   +A  G+I     M+  DK  +   A +  +
Sbjct: 87  KYEVEKFTGQNDFGLC*LKMRALLVQQGLVEALDGEIKLEKMMADGDKKALLQKAYNAII 266

Query: 64  LCLRDKVLREVVKDTT 79
           L L DKVLR+V K+TT
Sbjct: 267 LSLGDKVLRQVSKETT 314


>TC205325 similar to UP|Q8L7S4 (Q8L7S4) At1g68060/T23K23_9, partial (26%)
          Length = 1204

 Score = 26.6 bits (57), Expect = 2.4
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -1

Query: 25   VVLIQQKCAKARKGKILFSDTMSQEDKTKMADNARSFFVLCL 66
            + ++Q   AK RKG    + T +Q  K K+  +++  F LCL
Sbjct: 1108 ICVLQISTAKRRKGGYKATYTTTQPLKEKLKVSSKLIFFLCL 983


>AW781805 weakly similar to PIR|S04684|R5P ribosomal protein L9 precursor
           chloroplast - garden pea, partial (75%)
          Length = 472

 Score = 25.4 bits (54), Expect = 5.3
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = -1

Query: 18  LWKVKIEVVLIQQKCAKARKGKILFSDTMSQEDKTKMADNARSFFVLCLR 67
           LWK+ I +V +  K       KIL SDT         +DN  SF    LR
Sbjct: 421 LWKITISLVHLPVKLCLDYVNKILSSDT---------SDNLFSFTTFTLR 299


>BU081501 
          Length = 421

 Score = 25.0 bits (53), Expect = 6.9
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = -3

Query: 19  WKVKIEVVLIQQKCAKARKGKILFSDTMSQEDKTKMADNARSFFVLCLRDKV 70
           W  +I   +I+ KC K    K  +S+  +Q  K     + + FF++ + + V
Sbjct: 320 WSCQISPTIIRDKCTKLCSKKKKYSEDYNQFLKLSEDMDEQLFFLVWVEEDV 165


>AW133330 similar to GP|16417946|gb mevalonate kinase {Hevea brasiliensis},
           partial (32%)
          Length = 411

 Score = 24.6 bits (52), Expect = 9.1
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3

Query: 12  GDSDFGLWKVKI 23
           G+S+FGLW VK+
Sbjct: 355 GESEFGLWNVKL 320


>BM525884 
          Length = 339

 Score = 24.6 bits (52), Expect = 9.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 5   WDIEKFIGDSDFGLW 19
           W+ EK + +SD  LW
Sbjct: 292 WEFEKLVSNSDINLW 248


>BI969214 
          Length = 614

 Score = 24.6 bits (52), Expect = 9.1
 Identities = 13/36 (36%), Positives = 18/36 (49%)
 Frame = -3

Query: 42  FSDTMSQEDKTKMADNARSFFVLCLRDKVLREVVKD 77
           FSD  S E   +   + R FF  CL+ +    V+KD
Sbjct: 507 FSDYASPEPVNQKGQSLRPFFDECLKTRDSWSVLKD 400


>TC231255 similar to UP|Q93ZP3 (Q93ZP3) At1g32359/F27G20.10, partial (19%)
          Length = 551

 Score = 24.6 bits (52), Expect = 9.1
 Identities = 10/26 (38%), Positives = 17/26 (64%)
 Frame = +2

Query: 13 DSDFGLWKVKIEVVLIQQKCAKARKG 38
          D +  LW+VKIE++L+     + R+G
Sbjct: 74 DMEAVLWRVKIEMLLLWLPATQIREG 151


>TC203705 similar to UP|P93484 (P93484) BP-80 vacuolar sorting receptor,
           partial (38%)
          Length = 1045

 Score = 24.6 bits (52), Expect = 9.1
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -2

Query: 28  IQQKCAKARKGKI-LFSDTMSQEDKTKMADNARSFFV 63
           I+ KC+++   ++   S T +    +K  DN+RSFFV
Sbjct: 837 IKFKCSESELKRVHRVSHTQASHTISKETDNSRSFFV 727


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.323    0.137    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,248,027
Number of Sequences: 63676
Number of extensions: 28471
Number of successful extensions: 171
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of query: 83
length of database: 12,639,632
effective HSP length: 59
effective length of query: 24
effective length of database: 8,882,748
effective search space: 213185952
effective search space used: 213185952
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 52 (24.6 bits)