BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148757.5 + phase: 0
(613 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC230833 265 4e-71
TC207556 similar to UP|Q9SPB4 (Q9SPB4) Non-phototropic hypocotyl... 223 2e-58
TC208509 similar to UP|Q9LRP8 (Q9LRP8) Non-phototropic hypocotyl... 184 1e-46
TC217866 171 1e-42
TC223643 similar to UP|Q9FJY3 (Q9FJY3) Photoreceptor-interacting... 157 1e-38
TC233658 weakly similar to UP|Q94A73 (Q94A73) AT5g66560/K1F13_23... 128 1e-38
TC231319 similar to UP|Q9LFU0 (Q9LFU0) Non-phototropic hypocotyl... 148 6e-36
TC209886 similar to UP|Q9M6N8 (Q9M6N8) RPT2, partial (39%) 147 1e-35
TC207970 weakly similar to UP|Q94A73 (Q94A73) AT5g66560/K1F13_23... 147 2e-35
TC210611 similar to UP|Q9FJY3 (Q9FJY3) Photoreceptor-interacting... 141 7e-34
TC213886 139 4e-33
TC230959 similar to UP|Q9SPB4 (Q9SPB4) Non-phototropic hypocotyl... 139 5e-33
TC229238 similar to UP|Q9M6N8 (Q9M6N8) RPT2, partial (40%) 129 5e-30
TC234775 similar to UP|Q9FMF5 (Q9FMF5) Non-phototropic hypocotyl... 124 9e-29
TC222154 120 2e-27
TC222625 similar to GB|BAB11327.1|10177916|AB016886 photorecepto... 117 1e-26
BM085556 114 1e-25
TC208784 similar to UP|Q9FYC8 (Q9FYC8) Non-phototropic hypocotyl... 112 5e-25
TC208469 weakly similar to UP|Q9LIF0 (Q9LIF0) Similarity to phot... 110 1e-24
BQ252813 weakly similar to GP|10177537|dbj photoreceptor-interac... 108 9e-24
>TC230833
Length = 732
Score = 265 bits (677), Expect = 4e-71
Identities = 131/213 (61%), Positives = 168/213 (78%)
Frame = +1
Query: 303 TAMALYASSCCCASLEKRIGFQLDEADLEDLLIPNIGYSMETIHDIDCVQRMLDHFMIVD 362
TAM L S C ++LEKRIG QLD+A LE LL+PN YSMET++++DCVQR+LDHF+ +D
Sbjct: 10 TAMILRVSPSCISNLEKRIGMQLDQATLEGLLMPNFSYSMETLYNVDCVQRILDHFLAMD 189
Query: 363 NDDADSTSNNDIVEEERRIVGNCQRATPMTKVADLMDSYLAEVAPDVNLKFPKFQSLAAV 422
++ + ++ +++G+ TP+T VA L+D YLAEVAPD+NLK PKFQ+LAA
Sbjct: 190 QVTGCASPCSI---DDGQLIGS-PSLTPITMVAKLIDGYLAEVAPDINLKLPKFQALAAA 357
Query: 423 IPDCARTLDDGIYRAIDIYLKSHAWMTESEKEQICRLMNCQKLSLEASTHAAQNERLPLR 482
+P+ AR LDDG+YRAIDIYLKSH W+ ESE+EQ+CRLM+CQKLSLEA THAAQNERLP+R
Sbjct: 358 VPEYARPLDDGLYRAIDIYLKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPIR 537
Query: 483 VVVQVLFFEQLKLRTSVAGWFFASDTLENSTTL 515
++VQVLFFEQL+LRTS+AG F SD L+ S L
Sbjct: 538 IIVQVLFFEQLQLRTSIAGCFLVSDNLDGSRQL 636
>TC207556 similar to UP|Q9SPB4 (Q9SPB4) Non-phototropic hypocotyl 3, partial
(43%)
Length = 1457
Score = 223 bits (568), Expect = 2e-58
Identities = 127/323 (39%), Positives = 192/323 (59%), Gaps = 14/323 (4%)
Frame = +1
Query: 267 SNLSEADQRNLIEEIVELLPNEKGVTQTKFLLRSLRTAMALYASSCCCASLEKRIGFQLD 326
S+L +QR +IE +V ++P +K FLLR LR A+ L + LEKR+G Q +
Sbjct: 133 SSLQAKEQRMIIESLVSIIPPQKDSVSCSFLLRLLRMAIMLKVAPALVTELEKRVGMQFE 312
Query: 327 EADLEDLLIPNIGYSMETIHDIDCVQRMLDHFMIVDNDDADSTSNNDIVEEERRIVGNCQ 386
+A L DLLIP+ ET++D+D VQR+L+HF++ + ++ S S N +++ +G
Sbjct: 313 QATLADLLIPSYNKG-ETMYDVDLVQRLLEHFIVQEQTESSSPSRNSFSDKQHMGMGMGM 489
Query: 387 RA--TPMTKVADLMDSYLAEVAPDVNLKFPKFQSLAAVIPDCARTLDDGIYRAIDIYLKS 444
+VA L+DSYL EV+ D NL KFQ LA +P+ ART DDG+YRAID YLK+
Sbjct: 490 GCILNAKARVARLVDSYLTEVSRDRNLSLTKFQVLAEALPESARTCDDGLYRAIDSYLKA 669
Query: 445 HAWMTESEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLKLRTSVAGWFF 504
H ++E E++++CR+M+CQKLS++A HAAQNERLPLRVVVQVLF EQ+K+ ++A
Sbjct: 670 HPTLSEHERKRLCRVMDCQKLSIDACLHAAQNERLPLRVVVQVLFAEQVKISNALASSSV 849
Query: 505 ASDTLENSTTLSGNLALLR------NDGNTTHNNPV----VAFDHMKDRVSELEKECLSM 554
E+ ++ LL +G T + + +K + EL+ + S+
Sbjct: 850 KDVESESHAMVTNRKTLLEGTPQSFQEGWTAAKKDINTLKFELESVKAKYMELQNDMASL 1029
Query: 555 KQDLEKMMKSK--GSWNMLLKKL 575
++ +KM+K K +W+ KKL
Sbjct: 1030QKQFDKMLKQKHTSAWSSGWKKL 1098
>TC208509 similar to UP|Q9LRP8 (Q9LRP8) Non-phototropic hypocotyl-like
protein, partial (63%)
Length = 972
Score = 184 bits (466), Expect = 1e-46
Identities = 107/295 (36%), Positives = 163/295 (54%), Gaps = 7/295 (2%)
Frame = +3
Query: 212 WFDDVSSLSLPLYKRFMQGAIARHMKPRRVSGSLVYYAKKHIPSLSSF-QNGNSSKSNLS 270
WFDD + + + + + ++ + + +YA +P LSS +NG ++
Sbjct: 6 WFDDACIVDMDYLVKTLSSIKQKGVRADLIGSIITHYASIWLPDLSSSAENGVTTHFQSP 185
Query: 271 EA------DQRNLIEEIVELLPNEKGVTQTKFLLRSLRTAMALYASSCCCASLEKRIGFQ 324
E+ +R +E +V +LP EK FLLR LRTA + + LE RI +Q
Sbjct: 186 ESVTNSWMKKRFFVETLVSVLPPEKDSVPCNFLLRLLRTANMVRVDATYRGELENRISWQ 365
Query: 325 LDEADLEDLLIPNIGYSMETIHDIDCVQRMLDHFMIVDNDDADSTSNNDIVEEERRIVGN 384
LD+A L++L+IP+ ++ T+ D++ V R++ FM +D D A
Sbjct: 366 LDQASLKELMIPSFSHTCGTLLDVELVLRLVKRFMSLDRDGA------------------ 491
Query: 385 CQRATPMTKVADLMDSYLAEVAPDVNLKFPKFQSLAAVIPDCARTLDDGIYRAIDIYLKS 444
+ KVA L+D YLAE A D NL +F +LA +P +R DDG+YRAID YLK+
Sbjct: 492 -----ALVKVAKLVDCYLAEAAVDANLTLSEFIALAGALPSHSRATDDGLYRAIDTYLKA 656
Query: 445 HAWMTESEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLKLRTSV 499
H +++ E++ +CRL++ +KL+ EAS HAAQNERLP+R V+QVLF EQ KL +
Sbjct: 657 HPDVSKQERKGLCRLLDSRKLTTEASLHAAQNERLPVRAVIQVLFSEQTKLNRHI 821
>TC217866
Length = 1362
Score = 171 bits (432), Expect = 1e-42
Identities = 111/296 (37%), Positives = 170/296 (56%), Gaps = 1/296 (0%)
Frame = +2
Query: 275 RNLIEEIVELLPNEKGVTQTKFLLRSLRTAMALYASSCCCASLEKRIGFQLDEADLEDLL 334
R ++E IV LLP EKG +FLL+ L+ A+ + + L KRIG QL+EA + D+L
Sbjct: 50 RLIVETIVWLLPTEKGSVPCRFLLKLLKAAIFVESGDRTKEELVKRIGQQLEEASVSDIL 229
Query: 335 IPNIGYSMETIHDIDCVQRML-DHFMIVDNDDADSTSNNDIVEEERRIVGNCQRATPMTK 393
I TI+D+ VQ ++ + FM N + +S +++ E R G A+ +
Sbjct: 230 IQ--APDGATIYDVSIVQNIVREFFMKNGNAEIESVGGDEL--EGIRKPGILSDASKLM- 394
Query: 394 VADLMDSYLAEVAPDVNLKFPKFQSLAAVIPDCARTLDDGIYRAIDIYLKSHAWMTESEK 453
VA L+D YLAE+A D NL P+F +LA ++ +R DG+YRAID YLK H + + EK
Sbjct: 395 VAKLIDEYLAEIAKDPNLPLPEFVNLAELVSSISRPAHDGLYRAIDTYLKEHPAINKGEK 574
Query: 454 EQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLKLRTSVAGWFFASDTLENST 513
++IC+LM+C+KLS++A HA QNERLPLRVVVQVL+FEQL+ A+ + ++
Sbjct: 575 KRICKLMDCRKLSVDACLHAVQNERLPLRVVVQVLYFEQLRT---------AASSGTSTP 727
Query: 514 TLSGNLALLRNDGNTTHNNPVVAFDHMKDRVSELEKECLSMKQDLEKMMKSKGSWN 569
+ + L N+ N + + + D V+ E E +++++L + S G N
Sbjct: 728 DIPRGIKDLNNESNGSSRSGTTNPEDELDAVATAE-ELKALRKELASLRLSNGVGN 892
>TC223643 similar to UP|Q9FJY3 (Q9FJY3) Photoreceptor-interacting
protein-like, partial (27%)
Length = 737
Score = 157 bits (398), Expect = 1e-38
Identities = 86/187 (45%), Positives = 119/187 (62%), Gaps = 13/187 (6%)
Frame = +3
Query: 405 VAPDVNLKFPKFQSLAAVIPDCARTLDDGIYRAIDIYLKSHAWMTESEKEQICRLMNCQK 464
+A D NLK KF LA +PD AR DG+YRA+D+YLK+H W+++S++E+IC +++CQK
Sbjct: 3 IATDANLKPSKFYDLAISVPDRARLFHDGLYRAVDVYLKAHPWVSKSDREKICAVLDCQK 182
Query: 465 LSLEASTHAAQNERLPLRVVVQVLFFEQLKLRTSVAGWFFASDTLENSTTLSGNLALLRN 524
L+LEA +HAAQNERLPLR VV+VLFFEQL+LR ++AG A++ + + +
Sbjct: 183 LTLEACSHAAQNERLPLRAVVRVLFFEQLQLRRAIAGKLGAAEEPSRHSAAMAEEEEVED 362
Query: 525 DGN----TTHNNPVVA--FDHMKDRVSELEKECLSMKQDLEKMMK----SKGSWNMLL-- 572
D T N V+ D M+ RV ELE+EC SMK+ +EKM K G W L
Sbjct: 363 DNTTWQVTVRENQVLRLDMDSMRTRVHELERECSSMKRAIEKMDKMGPRGGGPWRASLAL 542
Query: 573 -KKLGCR 578
+K GC+
Sbjct: 543 GRKFGCK 563
>TC233658 weakly similar to UP|Q94A73 (Q94A73) AT5g66560/K1F13_23, partial
(17%)
Length = 657
Score = 128 bits (321), Expect(2) = 1e-38
Identities = 64/127 (50%), Positives = 90/127 (70%), Gaps = 3/127 (2%)
Frame = +1
Query: 75 PGGAKAFLLIARFCYGVKMELTPSNVVPLRCAAEFLQMSEDYGEGNLMIQTENFLN-HIF 133
PGG++AF + A+FCYGVK++LTPSNV LRCA EFL+M+EDY E NL+ +TE FL+ H+
Sbjct: 19 PGGSEAFEMAAKFCYGVKIDLTPSNVAALRCAGEFLEMTEDYSEDNLVSKTEGFLSQHVL 198
Query: 134 GQWTDTLKALKTCEDVLPLAEELHITSRCIHSLVLKA--ADPTLAILPLSGPSSVQSPDN 191
D++K LK+C+ ++P+AE L IT RC+ S+V +A ADP L P+S +SV
Sbjct: 199 KNLKDSVKTLKSCDSLMPMAENLGITQRCVDSVVSRASSADPALFGWPVSDATSV---SK 369
Query: 192 SEMWNGI 198
+WNG+
Sbjct: 370 QVLWNGL 390
Score = 50.4 bits (119), Expect(2) = 1e-38
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Frame = +2
Query: 213 FDDVSSLSLPLYKRFMQGAIARHMKPRRVSGSLVYYAKKHIPSLS-----SFQNGNSSKS 267
F+D++ L LPL+KR + + + P + L+YYAKK+IP +S + +SS S
Sbjct: 440 FEDLALLRLPLFKRLILAMRSAELSPEIIETCLMYYAKKYIPGVSRSNRKPLPSSSSSSS 619
Query: 268 NLSEADQRNLIE 279
+EA+Q+ L+E
Sbjct: 620 VATEAEQKELLE 655
>TC231319 similar to UP|Q9LFU0 (Q9LFU0) Non-phototropic hypocotyl 3-like
protein, partial (31%)
Length = 897
Score = 148 bits (374), Expect = 6e-36
Identities = 87/249 (34%), Positives = 148/249 (58%), Gaps = 8/249 (3%)
Frame = +2
Query: 344 TIHDIDCVQRMLDHFMIVDNDDADSTSNNDIVEEERRIVGNCQRATPMTKVADLMDSYLA 403
T+ DID VQR++++F++ E+++I Q+ T ++ L+D+YLA
Sbjct: 56 TMLDIDVVQRIVEYFLM---------------HEQQQI--QQQQKTRKFNISRLLDNYLA 184
Query: 404 EVAPDVNLKFPKFQSLAAVIPDCARTLDDGIYRAIDIYLKSHAWMTESEKEQICRLMNCQ 463
E+A D NL KFQ A ++P+ R+ DDG+YRAID YLK+ +TE +++++C++MNC+
Sbjct: 185 EIARDPNLSITKFQVFAELLPENTRSYDDGLYRAIDTYLKTQPSLTEHDRKRLCKIMNCE 364
Query: 464 KLSLEASTHAAQNERLPLRVVVQVLFFEQLKLRTSV-----AGWFFASDTLENSTTLSGN 518
KLSL+A HAAQNERLPLR VVQ+LF EQ+K+R ++ A S+ N T+ + +
Sbjct: 365 KLSLDACLHAAQNERLPLRTVVQILFSEQVKMRAAMHEKEPAQIGIQSEQEGNHTSATMD 544
Query: 519 LALLRNDGNTTHNNPVVAFDHMKDRVSELEKECLSMKQDLEKMM---KSKGSWNMLLKKL 575
+ L+ + +++K ++ EL+ + ++Q+ EK+ K+ W++ +K+
Sbjct: 545 IKALKAE-----------LENVKSQMVELQNDYCELQQEYEKLSNKPKNSSGWSLNWRKI 691
Query: 576 GCRLIPKPS 584
L KP+
Sbjct: 692 KNSLHTKPA 718
>TC209886 similar to UP|Q9M6N8 (Q9M6N8) RPT2, partial (39%)
Length = 844
Score = 147 bits (372), Expect = 1e-35
Identities = 87/269 (32%), Positives = 142/269 (52%), Gaps = 6/269 (2%)
Frame = +1
Query: 20 WLCSTGLPSDVIIEIGDASFHLHKFPLISRSKELERFMKDIPSDSEKSILELHDLPGGAK 79
W+ S +P+DVI+E+G+ F LHKF L+++S + + + + ++ E + ++L D+PGG
Sbjct: 118 WVFSQDIPTDVIVEVGETIFSLHKFMLVAKSNYIRKLILE-SNEGELTRIDLSDIPGGPS 294
Query: 80 AFLLIARFCYGVKMELTPSNVVPLRCAAEFLQMSEDYGEGNLMIQTENFLNHI-FGQWTD 138
F A+FCYGV E+T NV LRCAAEFLQM++ Y E NL +TE FL + F T
Sbjct: 295 IFEKTAKFCYGVNFEITVHNVAVLRCAAEFLQMTDQYCENNLAGRTEEFLTQVAFFTLTG 474
Query: 139 TLKALKTCEDVLPLAEELHITSRCIHSLVLKAADPTLAILPLSGPSSVQSPDNSEMWNGI 198
+ LK+C +LP A+++++ RC+ ++ KA + PS +SP N
Sbjct: 475 AVTVLKSCRHLLPYADDINVVKRCVEAVSAKACSEA------NFPS--RSPPN------- 609
Query: 199 SMSLTSKETGEDWWFDDVSSLSLPLYKRFMQGAIARHMKPRRVSGSLVYYAKKHIPSLSS 258
WW ++++ L + + R + R K V+ +L+ Y ++ + L
Sbjct: 610 ------------WWTEELALLDIDFFARVIDAMKQRSAKALTVAAALITYTERALRDLVR 753
Query: 259 FQNGNSSKS-----NLSEADQRNLIEEIV 282
GN +S + S + QR L+E IV
Sbjct: 754 DHTGNGIRSSDPGDSDSRSKQRKLLEAIV 840
>TC207970 weakly similar to UP|Q94A73 (Q94A73) AT5g66560/K1F13_23, partial
(16%)
Length = 1114
Score = 147 bits (370), Expect = 2e-35
Identities = 95/266 (35%), Positives = 156/266 (57%), Gaps = 4/266 (1%)
Frame = +1
Query: 330 LEDLLIPNIGYSMETIHDIDCVQRMLDHFMIVDNDDADSTSNNDIVEEERRIVGNCQRAT 389
L+DLLIP+ ++ +T+ D+D VQR++ +++ T N+ + + Q +
Sbjct: 4 LDDLLIPSYSFTGDTLFDVDTVQRIMSNYL------ESQTGNHLVFNADDEYFSPPQ--S 159
Query: 390 PMTKVADLMDSYLAEVAPDVNLKFPKFQSLAAVIPDCARTLDDGIYRAIDIYLKSHAWMT 449
M +V LM++Y+AE+A D NL KF SLA +IP+ +R +DG+YRAIDI+LK+H ++
Sbjct: 160 DMERVGKLMENYIAEIATDRNLAVTKFTSLAELIPEQSRPTEDGMYRAIDIFLKAHPALS 339
Query: 450 ESEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLKLRTSVAGWFFASDTL 509
+ +++++C +M+CQKLS EA HAAQN+RLP++ VVQVL++EQ +LR ++ G S +
Sbjct: 340 DMDRKKVCSVMDCQKLSREACAHAAQNDRLPVQTVVQVLYYEQQRLRNAMNG----SRSG 507
Query: 510 ENSTTLSGNLALLRNDGNTTHNNPVVAFDHMKDRVSELEKECLSMKQDLEKM-MKSKGSW 568
E+S N+ +T +PV + +S L +E +K +L K+ M+ K
Sbjct: 508 ESSVDSKLNV-------YSTDLHPV------SNELSTLRRENEDLKLELVKLKMRLKEIE 648
Query: 569 NMLLKKLGCRLIPKP---SNPKASKP 591
N LK + P ++P A KP
Sbjct: 649 NSTLKS----TVNSPAVSASPSADKP 714
>TC210611 similar to UP|Q9FJY3 (Q9FJY3) Photoreceptor-interacting
protein-like, partial (25%)
Length = 853
Score = 141 bits (356), Expect = 7e-34
Identities = 82/185 (44%), Positives = 107/185 (57%), Gaps = 24/185 (12%)
Frame = +1
Query: 418 SLAAVIPDCARTLDDGIYRAIDIYLKSHAWMTESEKEQICRLMNCQKLSLEASTHAAQNE 477
+ A +PD AR DDG+YRA+D+YLK+H W+ E E+E+I L++CQKL+LEA THAAQNE
Sbjct: 1 NFAISLPDEARLFDDGLYRAVDVYLKAHPWVLEEEREKISGLLDCQKLTLEACTHAAQNE 180
Query: 478 RLPLRVVVQVLFFEQLKLRTSVAGWFFASDTLENSTTLSGNLALLRNDGN---------- 527
RLPLR VVQVLFFEQL+LR ++AG A++ S L DG
Sbjct: 181 RLPLRAVVQVLFFEQLQLRQAIAGTLMAAEAAAEPGRQSAALEREAEDGRGEGLGLEHVQ 360
Query: 528 --------TTHNNPVVA--FDHMKDRVSELEKECLSMKQDLEKMMK---SKGSWNMLL-K 573
N V+ D M+ RV +LE+EC SMK+ + K K S G W L +
Sbjct: 361 ERNGTWRVAVRENQVLRLDMDSMRTRVHQLERECSSMKRVISKFDKFAASGGGWRASLGR 540
Query: 574 KLGCR 578
K GC+
Sbjct: 541 KFGCK 555
>TC213886
Length = 718
Score = 139 bits (350), Expect = 4e-33
Identities = 75/238 (31%), Positives = 129/238 (53%), Gaps = 1/238 (0%)
Frame = +2
Query: 20 WLCSTGLPSDVIIEIGDASFHLHKFPLISRSKELERFMKDIPSDSEKSILELHDLPGGAK 79
W S + SDV +++G+ SF LHKFPL+S+S + + + + S + S +EL+D+PGGA+
Sbjct: 29 WAYSHEILSDVTVQVGEVSFSLHKFPLVSKSGYIGKLVSE--SSDDVSFIELYDVPGGAE 202
Query: 80 AFLLIARFCYGVKMELTPSNVVPLRCAAEFLQMSEDYGEGNLMIQTENFLNHI-FGQWTD 138
AF L +FCYG+ E++ N+ LRC AE+ M+EDY GNL+ + +++LN + +
Sbjct: 203 AFELATKFCYGINFEISVENIATLRCVAEYFGMTEDYSVGNLVGRVDSYLNEVALKTISG 382
Query: 139 TLKALKTCEDVLPLAEELHITSRCIHSLVLKAADPTLAILPLSGPSSVQSPDNSEMWNGI 198
+ L E LP+AE+ + SRCI ++ A+ T P+ G G
Sbjct: 383 AVSILHMSERFLPIAEKAKLVSRCIDAIAFIASKETQFCSPMRGDII-----------GT 529
Query: 199 SMSLTSKETGEDWWFDDVSSLSLPLYKRFMQGAIARHMKPRRVSGSLVYYAKKHIPSL 256
+ + WW +D++ L + +++R + +AR K + ++ YA+K + L
Sbjct: 530 DGMASHQRPVVHWWAEDLTVLRIDIFQRVLIAMMARGFKQFALGPIIMLYAQKSLRGL 703
>TC230959 similar to UP|Q9SPB4 (Q9SPB4) Non-phototropic hypocotyl 3, partial
(26%)
Length = 944
Score = 139 bits (349), Expect = 5e-33
Identities = 87/226 (38%), Positives = 128/226 (56%), Gaps = 14/226 (6%)
Frame = +1
Query: 397 LMDSYLAEVAPDVNLKFPKFQSLAAVIPDCARTLDDGIYRAIDIYLKSHAWMTESEKEQI 456
L+DSYL EV+ D NL KFQ L+ +P+ ART DDG+YRAID YLK+H +TE E++++
Sbjct: 10 LVDSYLTEVSRDRNLSLTKFQVLSEALPESARTSDDGLYRAIDSYLKAHPTLTEHERKRL 189
Query: 457 CRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLKLRTSVAGWFFASDTLE------ 510
CR+M+CQKLS++A HAAQNERLPLRVVVQVLF EQ+K+ ++A + E
Sbjct: 190 CRVMDCQKLSIDACMHAAQNERLPLRVVVQVLFSEQVKISNALANNGSLKEGAESHYQPM 369
Query: 511 --NSTTLSGNLALLRNDGNTTHNNPV----VAFDHMKDRVSELEKECLSMKQDLEKMMKS 564
N TL +G T + + +K + EL+ + ++++ +K++K
Sbjct: 370 IPNRKTLLEGTPQSFQEGWTAAKKDINTLKFELETVKTKYLELQNDMENLQKHFDKLLKQ 549
Query: 565 K--GSWNMLLKKLGCRLIPKPSNPKASKPCRKSKIAPDAVTELEEN 608
K +W KKL + K +N + I+P T E+N
Sbjct: 550 KHTSAWTSGWKKLS--KLTKMTNEE------NHDISPQIPTSEEQN 663
>TC229238 similar to UP|Q9M6N8 (Q9M6N8) RPT2, partial (40%)
Length = 1111
Score = 129 bits (323), Expect = 5e-30
Identities = 79/247 (31%), Positives = 128/247 (50%)
Frame = +3
Query: 318 EKRIGFQLDEADLEDLLIPNIGYSMETIHDIDCVQRMLDHFMIVDNDDADSTSNNDIVEE 377
EKR+ L+ ++DLL+ Y E + D+D V+R++ F V+ + + N +
Sbjct: 3 EKRVTEILEHVTVDDLLVLTFSYDGERLLDLDSVRRIISGF--VEREKGTTVFNAGVNFN 176
Query: 378 ERRIVGNCQRATPMTKVADLMDSYLAEVAPDVNLKFPKFQSLAAVIPDCARTLDDGIYRA 437
E + M +VA +DSYLAE+A L KF +A +IP AR DD +YRA
Sbjct: 177 E-------DFSATMQRVAKTVDSYLAEIAAYAELSISKFNGIAILIPKGARKSDDDLYRA 335
Query: 438 IDIYLKSHAWMTESEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLKLRT 497
+DIYLK H + E EKE++C +++ KLS EA HA++N+RLPL++V+ L+++QL++R+
Sbjct: 336 VDIYLKVHPNLDEIEKEKVCSVLDTLKLSYEARVHASKNKRLPLQIVLHALYYDQLQIRS 515
Query: 498 SVAGWFFASDTLENSTTLSGNLALLRNDGNTTHNNPVVAFDHMKDRVSELEKECLSMKQD 557
A A L +++L+R + EL E + MK
Sbjct: 516 GTAADKQAVVAAAEKKQLQADVSLVREN-------------------EELRSELMKMKMF 638
Query: 558 LEKMMKS 564
+ + K+
Sbjct: 639 ISDLQKN 659
>TC234775 similar to UP|Q9FMF5 (Q9FMF5) Non-phototropic hypocotyl 3, partial
(16%)
Length = 499
Score = 124 bits (312), Expect = 9e-29
Identities = 58/122 (47%), Positives = 87/122 (70%)
Frame = +1
Query: 7 GSKSEIFYLYGQSWLCSTGLPSDVIIEIGDASFHLHKFPLISRSKELERFMKDIPSDSEK 66
G K+E F G SW +T +PSD +++IG+A+FHLHK+PL+SRS +L R + + D +
Sbjct: 136 GVKTEGFVQRGHSWYVATDIPSDFLVQIGEANFHLHKYPLVSRSGKLSRVIYE-SHDPDL 312
Query: 67 SILELHDLPGGAKAFLLIARFCYGVKMELTPSNVVPLRCAAEFLQMSEDYGEGNLMIQTE 126
+ + + D+PGG +AF L A+FCYG+ ++LT N+ LRCAAE+L+M+ED EGNL+ + E
Sbjct: 313 NKIVIDDIPGGEEAFELAAKFCYGIAVDLTAGNISGLRCAAEYLEMTEDLEEGNLIFKAE 492
Query: 127 NF 128
F
Sbjct: 493 AF 498
>TC222154
Length = 600
Score = 120 bits (301), Expect = 2e-27
Identities = 69/198 (34%), Positives = 112/198 (55%), Gaps = 4/198 (2%)
Frame = +1
Query: 35 GDASFHLHKFPLISRSKELERFMKDIPSDSEKSILELHDLPGGAKAFLLIARFCYGVKME 94
GD F+LHKFPL+S+S ++ + + ++ +++ D+PGGA F + A+FCYG+ +
Sbjct: 10 GDIKFYLHKFPLLSKSSHIQTLIS-LNNEENVDEVQISDIPGGANTFEICAKFCYGMTVT 186
Query: 95 LTPSNVVPLRCAAEFLQMSEDYGEGNLMIQTENFL-NHIFGQWTDTLKALKTCEDVLPLA 153
L NV+ RCAAE+L M E +GNL+ + + FL + IF W D++ L+T + +LPL
Sbjct: 187 LNAYNVIATRCAAEYLGMHEAIEKGNLIYKIDVFLSSSIFRSWKDSIILLQTSKSMLPLV 366
Query: 154 EELHITSRCIHSLVLKAADPTLAILPLSGPSSVQSPDNSEMWNGISMS---LTSKETGED 210
E+L + S CI S+ KA + + + P+ NGI + L ++ +D
Sbjct: 367 EDLKVVSHCIESIANKACVDVSKVDWSYTYNRKKLPEE----NGIESNQNGLRTRLVPKD 534
Query: 211 WWFDDVSSLSLPLYKRFM 228
WW +D+ L + L RFM
Sbjct: 535 WWVEDLCELEVDL--RFM 582
>TC222625 similar to GB|BAB11327.1|10177916|AB016886
photoreceptor-interacting protein-like {Arabidopsis
thaliana;} , partial (31%)
Length = 663
Score = 117 bits (293), Expect = 1e-26
Identities = 71/231 (30%), Positives = 120/231 (51%), Gaps = 7/231 (3%)
Frame = +3
Query: 62 SDSEKSILELHDLPGGAKAFLLIARFCYGVKMELTPSNVVPLRCAAEFLQMSEDYGEGNL 121
SDSE LELHD+PGG AF L A+FCYG+ + ++ N V CAA+FL+M++ +GN
Sbjct: 12 SDSESVSLELHDIPGGEDAFELCAKFCYGIAINISAHNFVSALCAAKFLRMNDSIEKGNF 191
Query: 122 MIQTENFLNH-IFGQWTDTLKALKTCEDVLPLAEELHITSRCIHSLVLKAADPTLAILPL 180
+ + E+F N I W D++ L+T + +E L I +CI S++ K P
Sbjct: 192 VGKLESFFNSCILEGWKDSIATLQTTATLPEWSENLGIVRKCIDSIIEKILTP------- 350
Query: 181 SGPSSVQSPDNSEMWNGISMSLTSKE---TGEDWWFDDVSSLSLPLYKRFMQGAIARHMK 237
P + T K+ +DWW +DVS L + L++ + + ++
Sbjct: 351 -------PPQVKWSYTYTRPGYTKKQHHSVPKDWWTEDVSDLDIDLFRCIIMAIRSTYVL 509
Query: 238 PRRVSGSLVY-YAKKHIPSLSSFQNGNSSKSNLSEADQRN--LIEEIVELL 285
P ++ G ++ YA + +P L+ ++ SS S E+ ++N ++E IV ++
Sbjct: 510 PPQLIGEALHVYACRWLPGLTKIKSSCSSASQTEESKEKNRKILETIVSMI 662
>BM085556
Length = 426
Score = 114 bits (285), Expect = 1e-25
Identities = 55/138 (39%), Positives = 90/138 (64%), Gaps = 1/138 (0%)
Frame = +3
Query: 20 WLCSTGLPSDVIIEIGDASFHLHKFPLISRSKELERFMKDIPSDSEKSILELHDLPGGAK 79
W+ S +P+DVI+ +G +F LHKF L ++S + + + + +S+ + +E+ D+PGG++
Sbjct: 15 WVFSPEIPTDVIVAVGQTNFSLHKFILAAKSNYVRKVIME-SEESDLTRIEISDIPGGSE 191
Query: 80 AFLLIARFCYGVKMELTPSNVVPLRCAAEFLQMSEDYGEGNLMIQTENFLNHI-FGQWTD 138
AF A+FCYGV E+T NV L CAA FLQM+++Y +GNL +TE+FL+ +
Sbjct: 192 AFEKAAKFCYGVNFEITVHNVAALHCAAVFLQMTDEYCDGNLAGRTEDFLSQVGLSTLHS 371
Query: 139 TLKALKTCEDVLPLAEEL 156
+ LK+C+ +LP A E+
Sbjct: 372 AVAVLKSCQKILPFAAEV 425
>TC208784 similar to UP|Q9FYC8 (Q9FYC8) Non-phototropic hypocotyl 3-like
protein, partial (16%)
Length = 1068
Score = 112 bits (280), Expect = 5e-25
Identities = 65/157 (41%), Positives = 99/157 (62%), Gaps = 14/157 (8%)
Frame = +3
Query: 443 KSHAWMTESEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLKLRTSVAGW 502
++H W+++ EKE++C +++ QKLS+ A HA+QN+RLPLRVV+QVLFFEQL LRT++
Sbjct: 3 QAHPWLSDREKEELCNIIDYQKLSIHACAHASQNDRLPLRVVLQVLFFEQLHLRTALTRC 182
Query: 503 FFASD-----TLENSTTLSGNLA--LLRNDGNTT--HNNPV--VAFDHMKDRVSELEKEC 551
A D T GN A +++ DG T N V V D M RV ELE+E
Sbjct: 183 LNALDGEIAPAAPVPITALGNTAGEIVQRDGWVTVVRENQVLKVDMDRMSSRVGELEEEF 362
Query: 552 LSMKQDLEKMMK---SKGSWNMLLKKLGCRLIPKPSN 585
+KQ+++ + K S+ S ++ +K+GC+L+P+PS+
Sbjct: 363 SKIKQEMKSVTKSHSSRSSPRLVARKIGCKLVPRPSD 473
>TC208469 weakly similar to UP|Q9LIF0 (Q9LIF0) Similarity to
photoreceptor-interacting transcription factor, partial
(20%)
Length = 847
Score = 110 bits (276), Expect = 1e-24
Identities = 73/203 (35%), Positives = 108/203 (52%), Gaps = 16/203 (7%)
Frame = +1
Query: 389 TPMTKVADLMDSYLAEVAPDVNLKFPKFQSLAAVIPDCARTLDDGIYRAIDIYLKSHAWM 448
TP+ KVA L+D Y+AE+APD LK KF +LA IPD AR D +Y A+D+YL+ H +
Sbjct: 52 TPIRKVASLIDLYIAEIAPDPCLKTSKFLALATAIPDSARDSYDELYHAMDMYLEVHTQL 231
Query: 449 TESEKEQICRLMNCQKLSLEASTHAAQNERLPLRVVVQVLFFEQLKLRTSVAGWFFASDT 508
++ E+ +IC +N +KLS +A H +QN++ P + VQ L +Q KL+ ++ ++ +
Sbjct: 232 SQEERLKICCGLNFEKLSPQACLHLSQNKKFPSKSTVQALISQQSKLK-NLLHVIPSTSS 408
Query: 509 LENSTTLSGNLALLRNDGNTTHNNPVV---AFDHMKD-------------RVSELEKECL 552
+S S A + N T V+ FD D RV ELEK C
Sbjct: 409 YNDSPCNSSGAAAQKGKKNKTSEQVVLYSSNFDISTDNEKLKAHLQGMQWRVMELEKFCR 588
Query: 553 SMKQDLEKMMKSKGSWNMLLKKL 575
M+ + K+ KSK S + K L
Sbjct: 589 KMQIQMAKITKSKASGHSYAKSL 657
>BQ252813 weakly similar to GP|10177537|dbj photoreceptor-interacting
protein-like {Arabidopsis thaliana}, partial (16%)
Length = 421
Score = 108 bits (269), Expect = 9e-24
Identities = 63/144 (43%), Positives = 90/144 (61%), Gaps = 3/144 (2%)
Frame = +1
Query: 73 DLPGGAKAFLLIARFCYGVKMELTPSNVVPLRCAAEFLQMSEDYGEGNLMIQTENFLNH- 131
D PGG++ F L A+FC+G K++L+ SNVVPLRCA EFL+M+E + + NL+ +TE FL+H
Sbjct: 28 DFPGGSETFELAAKFCFGAKIDLSSSNVVPLRCAGEFLEMTEQHSKENLISKTETFLSHS 207
Query: 132 IFGQWTDTLKALKTCEDVLPLAEELHITSRCIHSLVLKAADPTLAILPLS-GPSSVQSPD 190
+ +++ ALK+CE +LPLA+ L IT RC+ S+V TL LP+S S++ P
Sbjct: 208 VLNSIKNSIIALKSCERLLPLADTLAITRRCVDSIV----SETLFRLPVSDSASTLLLPT 375
Query: 191 NSEMWNGISMSLTSKETGE-DWWF 213
S+ TGE D WF
Sbjct: 376 GGR---------RSRRTGEDDSWF 420
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.318 0.133 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,007,604
Number of Sequences: 63676
Number of extensions: 363291
Number of successful extensions: 2072
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 2018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2030
length of query: 613
length of database: 12,639,632
effective HSP length: 103
effective length of query: 510
effective length of database: 6,081,004
effective search space: 3101312040
effective search space used: 3101312040
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Medicago: description of AC148757.5