TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148532.15 + phase: 1 /partial
         (178 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC228072 weakly similar to UP|Q9LW18 (Q9LW18) Emb|CAB87707.1, pa...   174  3e-44
TC233183 similar to UP|Q8IP81 (Q8IP81) CG31856-PA, partial (21%)       44  5e-05
TC207925 similar to UP|O65462 (O65462) Receptor like protein (Fr...    30  0.60
TC214889 homologue to PIR|C86216|C86216 protein T23G18.6 [import...    30  0.79
BE059735 homologue to PIR|C86216|C86 protein T23G18.6 [imported]...    30  0.79
TC214891 homologue to PIR|C86216|C86216 protein T23G18.6 [import...    28  3.0
CA853192                                                               27  3.9
TC210174                                                               27  5.1
TC230401 similar to UP|Q8VZI6 (Q8VZI6) AT4g33380/F17M5_140, part...    26  8.7
TC206546 weakly similar to UP|Q9LFD1 (Q9LFD1) Laccase-like prote...    26  8.7
TC222266                                                               26  8.7

>TC228072 weakly similar to UP|Q9LW18 (Q9LW18) Emb|CAB87707.1, partial (11%)
          Length = 1066

 Score =  174 bits (440), Expect = 3e-44
 Identities = 88/164 (53%), Positives = 118/164 (71%), Gaps = 5/164 (3%)
 Frame = +3

Query: 17  FKWGQKRGKGGKKRDIQFYQSFTLRGVDYSLFDNVYVKNDFA--EPRIGKIIKIWETPTL 74
           F WG+KRG GGKK+D+QFY+SF+  G +Y++ D V +++     EP IG++IKIWET   
Sbjct: 207 FAWGKKRGMGGKKKDVQFYESFSFDGAEYAINDTVCLQSGIGGGEPHIGRLIKIWETRDK 386

Query: 75  ERKIKVQWFFRPIEVSKCLTWIKIYFNELFFAC-GDG-DGLATIHPLESIAGKCNIVCIS 132
            RK+KVQWFFRP E+ K L  I++  NELF AC GDG  G A ++PLE+I GKCN+VCIS
Sbjct: 387 SRKVKVQWFFRPAEICKYLVGIEVKPNELFLACGGDGAKGFANVNPLEAIVGKCNVVCIS 566

Query: 133 KDSRNPQLSDKVTWSAAFVFYRYFDVGQRKIVEEVDDK-SIGIE 175
           KD  NPQ S +    A +V+YR+FDV Q K+V+++D K + GIE
Sbjct: 567 KDVGNPQPSGEA--KADYVYYRFFDVVQLKVVDQIDVKVAAGIE 692


>TC233183 similar to UP|Q8IP81 (Q8IP81) CG31856-PA, partial (21%)
          Length = 767

 Score = 43.5 bits (101), Expect = 5e-05
 Identities = 39/145 (26%), Positives = 65/145 (43%), Gaps = 5/145 (3%)
 Frame = +2

Query: 24  GKG-GKKRDIQFYQSFTLRGVDYSLFDNVYV--KNDFAEPRIGKIIKIWETPTLERKIKV 80
           GKG G+KR    + SF   G+ Y+L D V +  +    +P +  I  I ++     K+  
Sbjct: 263 GKGRGRKRH---HDSFEFDGIQYTLEDPVLLVPEEKGQKPYVAIIKDITQSINGNVKVTG 433

Query: 81  QWFFRPIEVSK--CLTWIKIYFNELFFACGDGDGLATIHPLESIAGKCNIVCISKDSRNP 138
           QWF+RP E  K     W      ELF++    D      P E++  KC +  + +  + P
Sbjct: 434 QWFYRPEEAEKKGGGNWQSCDTRELFYSFHRDD-----VPAEAVMHKCVVHFVPRHKQLP 598

Query: 139 QLSDKVTWSAAFVFYRYFDVGQRKI 163
           +  D       F+  + +D  +RK+
Sbjct: 599 KRKD----HPGFIVQKVYDTVERKL 661


>TC207925 similar to UP|O65462 (O65462) Receptor like protein (Fragment),
           partial (92%)
          Length = 1280

 Score = 30.0 bits (66), Expect = 0.60
 Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
 Frame = +3

Query: 2   SNSPPAPSPESETL-EFKWGQKRGKGGKKRDIQFYQSFTLRGVDYSLF--DNVYVK--ND 56
           SNSPP P    +++ E      + + G+K D+    S+T+RG +  +   D V ++  + 
Sbjct: 135 SNSPPKPFCWKQSIRETLHNMAKTRPGRK-DVD---SYTIRGTNKIVRAGDCVLMRPSDT 302

Query: 57  FAEPRIGKIIKIWETPTLERKIKVQWFFRPIE 88
              P + ++ KI +      K++V+W++RP E
Sbjct: 303 SKPPYVARVEKIEQDNRNNVKVRVRWYYRPEE 398


>TC214889 homologue to PIR|C86216|C86216 protein T23G18.6 [imported] -
           Arabidopsis thaliana {Arabidopsis thaliana;} , partial
           (97%)
          Length = 1671

 Score = 29.6 bits (65), Expect = 0.79
 Identities = 17/48 (35%), Positives = 28/48 (57%)
 Frame = -2

Query: 100 FNELFFACGDGDGLATIHPLESIAGKCNIVCISKDSRNPQLSDKVTWS 147
           FN +F       GLAT+H LE ++ +     I+K S+NP+  + +TW+
Sbjct: 869 FNSIFNVNEGSLGLATVHKLEGLSSE---KIIAKASKNPR--NTLTWT 741


>BE059735 homologue to PIR|C86216|C86 protein T23G18.6 [imported] -
           Arabidopsis thaliana, partial (37%)
          Length = 440

 Score = 29.6 bits (65), Expect = 0.79
 Identities = 17/48 (35%), Positives = 28/48 (57%)
 Frame = -2

Query: 100 FNELFFACGDGDGLATIHPLESIAGKCNIVCISKDSRNPQLSDKVTWS 147
           FN +F       GLAT+H LE ++ +     I+K S+NP+  + +TW+
Sbjct: 256 FNSIFNVNEGSLGLATVHKLEGLSSE---KIIAKASKNPR--NTLTWT 128


>TC214891 homologue to PIR|C86216|C86216 protein T23G18.6 [imported] -
           Arabidopsis thaliana {Arabidopsis thaliana;} , partial
           (66%)
          Length = 1257

 Score = 27.7 bits (60), Expect = 3.0
 Identities = 16/48 (33%), Positives = 27/48 (55%)
 Frame = -2

Query: 100 FNELFFACGDGDGLATIHPLESIAGKCNIVCISKDSRNPQLSDKVTWS 147
           FN +F       GLAT+H LE ++ +     I+K  +NP+  + +TW+
Sbjct: 416 FNSIFNVNKGSLGLATVHKLEGLSSE---KIIAKACKNPR--NTLTWT 288


>CA853192 
          Length = 549

 Score = 27.3 bits (59), Expect = 3.9
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = -2

Query: 52  YVKNDFAEPRIGKI-IKIWETPTLERKIKVQWFFRPIEVSK 91
           +V+N+F EP+IGKI I +   P++      Q +F  +++ K
Sbjct: 314 FVRNNFGEPKIGKIYINVMAKPSIS-----QVYFLKLDILK 207


>TC210174 
          Length = 861

 Score = 26.9 bits (58), Expect = 5.1
 Identities = 18/51 (35%), Positives = 24/51 (46%)
 Frame = -3

Query: 44  DYSLFDNVYVKNDFAEPRIGKIIKIWETPTLERKIKVQWFFRPIEVSKCLT 94
           +Y L  + YVK  F     GK   + +    + KIK+ WFF P   S C T
Sbjct: 835 NYQLQLSQYVKFFF----FGK*AHVSQVRLRKTKIKISWFF*PGPKSSCNT 695


>TC230401 similar to UP|Q8VZI6 (Q8VZI6) AT4g33380/F17M5_140, partial (13%)
          Length = 537

 Score = 26.2 bits (56), Expect = 8.7
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +2

Query: 74  LERKIKVQWFFRPIEVSKCLTWIK 97
           +E  I+++W F+P+E+ K   W+K
Sbjct: 398 MEESIQIRWEFKPVELIK---WVK 460


>TC206546 weakly similar to UP|Q9LFD1 (Q9LFD1) Laccase-like protein, partial
           (32%)
          Length = 1281

 Score = 26.2 bits (56), Expect = 8.7
 Identities = 19/66 (28%), Positives = 27/66 (40%)
 Frame = +2

Query: 24  GKGGKKRDIQFYQSFTLRGVDYSLFDNVYVKNDFAEPRIGKIIKIWETPTLERKIKVQWF 83
           GKG    +  FY    +   D+   D   +  DF +P+I    K   TP    K+K   F
Sbjct: 530 GKGYSMLEASFYNVSGVYTTDFP--DKPPIIFDFTDPKIALDTKYLFTPPKSTKVKKLKF 703

Query: 84  FRPIEV 89
              +EV
Sbjct: 704 NSTVEV 721


>TC222266 
          Length = 995

 Score = 26.2 bits (56), Expect = 8.7
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +1

Query: 17  FKWGQKRGKGGKKRDIQFYQSFTLRGVDYSLFDNVYVKN 55
           F+    RGK  K+    FY++    G D+S+   ++  N
Sbjct: 103 FREKTPRGKWSKQETELFYEAVREMGTDFSMIQEIFFPN 219


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.321    0.140    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,611,481
Number of Sequences: 63676
Number of extensions: 147164
Number of successful extensions: 717
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of query: 178
length of database: 12,639,632
effective HSP length: 91
effective length of query: 87
effective length of database: 6,845,116
effective search space: 595525092
effective search space used: 595525092
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)