TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148486.12 + phase: 0 /partial
         (391 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BQ452958                                                              165  4e-41
AW508132                                                              131  6e-31
TC212201 similar to UP|Q9FXI4 (Q9FXI4) F6F9.9 protein, partial (4%)   103  1e-22
TC211323 weakly similar to UP|Q867A5 (Q867A5) Human-type Bcnt (F...    41  0.001
TC229606 similar to UP|Q941Q3 (Q941Q3) Floral homeotic protein H...    40  0.002
TC205436 homologue to UP|PRS6_ARATH (Q9SEI4) 26S protease regula...    35  0.058
BE556691                                                               33  0.22
AW704833 similar to GP|9719716|gb|A ESTs gb|AV518228  gb|AV51904...    33  0.29
TC221449 UP|Q9FXZ1 (Q9FXZ1) Resistance protein MG23 (Fragment), ...    32  0.49
BG043313 similar to GP|9719716|gb| ESTs gb|AV518228  gb|AV519045...    31  0.84
BM528761 weakly similar to PIR|T39903|T399 serine-rich protein -...    31  1.1
TC204634 similar to UP|Q7F8R0 (Q7F8R0) KH domain-containing prot...    30  1.9
TC229531 similar to UP|Q9LV00 (Q9LV00) Emb|CAB85555.1, partial (...    30  2.4
TC204636 similar to UP|Q7F8R0 (Q7F8R0) KH domain-containing prot...    30  2.4
BE806061 similar to GP|21595125|gb endosperm-specific protein-li...    29  3.2
TC205434 homologue to UP|PRS6_ARATH (Q9SEI4) 26S protease regula...    29  3.2
BE823346 weakly similar to GP|29467561|db P0672D01.15 {Oryza sat...    29  4.2
AI461225 similar to GP|15983444|gb| AT3g02950/F13E7_10 {Arabidop...    29  4.2
TC218124                                                               29  4.2
TC204897 similar to UP|Q8W419 (Q8W419) Twin LOV protein 1, parti...    29  4.2

>BQ452958 
          Length = 426

 Score =  165 bits (417), Expect = 4e-41
 Identities = 88/141 (62%), Positives = 105/141 (74%), Gaps = 1/141 (0%)
 Frame = +1

Query: 177 VKSSEHGNLIDPELLNDILNNPEVIEKLVRNYN-VQNAQYAQNTGSSSNVFSHPPNPFNQ 235
           VKS+EHGN +D ELLN+ILNNPEVIEKLV +Y  + N+QY  N GSS   FS+PP P  Q
Sbjct: 1   VKSNEHGNFVDHELLNNILNNPEVIEKLVGDYGAINNSQYVHNAGSSLAAFSNPPIPI-Q 177

Query: 236 VETTTSSSNAFSSTSSYTHTTGGQMAPTMSTQWHRRPEISSAIAATPVEVPSTKDVNYYK 295
            +TTT SS  FS+TSSYT   GGQ  P ++TQW  RP +SSAI ++P+EVP  +DVNYYK
Sbjct: 178 GQTTTPSSVVFSTTSSYTPPIGGQAEP-VTTQWPPRPAVSSAIVSSPIEVPPARDVNYYK 354

Query: 296 SLIQQHGGDKQEALPYSSSNR 316
           SLIQQHGG K E LPYSS  +
Sbjct: 355 SLIQQHGGHK-ETLPYSSKRQ 414


>AW508132 
          Length = 261

 Score =  131 bits (329), Expect = 6e-31
 Identities = 66/85 (77%), Positives = 72/85 (84%)
 Frame = +3

Query: 1  VRLFLSEESPSQVGLNSQDHLQEKISSLLPQGEAGSDDILPPGFEGTHTSSQFDIKLSDI 60
          VRLFLSEESPSQVGLNSQD+LQ K S  L  G AGSDDILPPGFEGTH SSQF+IK S I
Sbjct: 6  VRLFLSEESPSQVGLNSQDNLQAKTSLSLRPGGAGSDDILPPGFEGTHASSQFEIKPSQI 185

Query: 61 PVISWIKPPKIVLDLTWQVVAGEES 85
          PVI WI P KIVL++TW+VV+GEES
Sbjct: 186PVIKWITPQKIVLNVTWRVVSGEES 260


>TC212201 similar to UP|Q9FXI4 (Q9FXI4) F6F9.9 protein, partial (4%)
          Length = 641

 Score =  103 bits (258), Expect = 1e-22
 Identities = 64/123 (52%), Positives = 77/123 (62%), Gaps = 1/123 (0%)
 Frame = +1

Query: 226 FSHPPNPFNQVETTTSSSNAFSSTSSYTHTTGGQMAPTMSTQWHRRPEISSAIAATPVEV 285
           FS+P  P  Q   TT  S  FS+TSSYT    GQ  P + TQW  RP +SSAI ++P+EV
Sbjct: 1   FSNPXIPI-QGXXTTXXSVVFSTTSSYTPPIXGQAEPVI-TQWPXRPAVSSAIVSSPIEV 174

Query: 286 PSTKDVNYYKSLIQQHGGDKQEALPYSSSNRQNQQPLSNYDTV-HNFRAKGSKPKISKPC 344
           P  +DVNYYKSLIQQHGG K E LPY SS RQ  Q  +NY+T  +N R K  + K S+  
Sbjct: 175 PPARDVNYYKSLIQQHGGHK-ETLPY-SSKRQIPQAATNYETTSYNHRGKV*ERKDSEAL 348

Query: 345 IFF 347
             F
Sbjct: 349 YLF 357



 Score = 89.4 bits (220), Expect = 3e-18
 Identities = 46/75 (61%), Positives = 53/75 (70%)
 Frame = +2

Query: 317 QNQQPLSNYDTVHNFRAKGSKPKISKPCIFFNSSRGCRNGANCTFQHDASFQPQQGNPSS 376
           + QQ +    T+     K    KI KPCIFFNSSRGC NGANC +QHDASFQP +GN  S
Sbjct: 272 RQQQTMRQPPTI--IEVKCENAKIVKPCIFFNSSRGCGNGANCAYQHDASFQP-RGNTVS 442

Query: 377 GMHSSKRMKMDNEIS 391
           G+ SSKRMKMD+EIS
Sbjct: 443 GIQSSKRMKMDHEIS 487


>TC211323 weakly similar to UP|Q867A5 (Q867A5) Human-type Bcnt (Fragment),
           partial (8%)
          Length = 795

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
 Frame = +3

Query: 212 NAQYAQNTGSSSN---VFSHPPNPFNQVETTTSSSNAFSSTSSYTHTTGGQMAPTMSTQW 268
           N+Q  Q T  +S      S    P++Q+     SS    S +     T  Q     +T  
Sbjct: 495 NSQSQQETALASGPKRAASLASIPYSQL-----SSGPLPSAAGNLRATINQAQSAATTMP 659

Query: 269 HRRPEISSAIAATPVEVPSTKDVNYYKSLIQQHGGDKQE 307
           ++    SSA A         KD NYYK+LI+QHG DKQ+
Sbjct: 660 YKLSTCSSAFAV--------KDANYYKNLIRQHGADKQD 752


>TC229606 similar to UP|Q941Q3 (Q941Q3) Floral homeotic protein HUA1, partial
           (50%)
          Length = 1569

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 30/106 (28%), Positives = 41/106 (38%), Gaps = 2/106 (1%)
 Frame = +3

Query: 273 EISSAIAATPVEVPSTKDVNYYKSLIQQHGGDKQEALPYSSSNRQNQQPLS--NYDTVHN 330
           E+    + TP E P   D  Y+          K +   + S  + N   +S  N D    
Sbjct: 372 EVPIVTSETPPERPGEPDCPYFL---------KTQRCKFGSKCKFNHPKVSSENADVSSG 524

Query: 331 FRAKGSKPKISKPCIFFNSSRGCRNGANCTFQHDASFQPQQGNPSS 376
              + S+P    PC F+  +  CR GA C F H    Q Q  N SS
Sbjct: 525 LPERPSEP----PCAFYMKTGKCRYGAACKFHHPKDIQIQLSNDSS 650



 Score = 30.0 bits (66), Expect = 1.9
 Identities = 22/103 (21%), Positives = 48/103 (46%)
 Frame = +3

Query: 272 PEISSAIAATPVEVPSTKDVNYYKSLIQQHGGDKQEALPYSSSNRQNQQPLSNYDTVHNF 331
           P  ++A   + +++  + D  Y+ +++   G    ++  + S+N   ++P   Y++  N 
Sbjct: 78  PVAAAAAVPSALDLKRSSDALYHPTILGTIG----QSEAWYSTNPLAKRP--RYESASNM 239

Query: 332 RAKGSKPKISKPCIFFNSSRGCRNGANCTFQHDASFQPQQGNP 374
                +P   K C  +  +R C+ G +C F H   + P+ G P
Sbjct: 240 TIYPQRPG-EKDCAHYMLTRTCKFGDSCKFDH-PFWVPEGGIP 362


>TC205436 homologue to UP|PRS6_ARATH (Q9SEI4) 26S protease regulatory subunit
           6B homolog (26S proteasome AAA-ATPase subunit RPT3)
           (Regulatory particle triple-A ATPase subunit 3), partial
           (32%)
          Length = 598

 Score = 35.0 bits (79), Expect = 0.058
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
 Frame = +3

Query: 229 PPNPFNQVETTTSSSNAFSSTSSYTHTTGGQMAPT-MSTQWHRRPEISSAIAATPVEVPS 287
           PP+P    E++  S+ +FSS    + +TG    PT  ST +HRRP  +S  +A+P  + S
Sbjct: 414 PPDPTTTSESSAPSTVSFSSPPHTSRSTG---TPTPSSTFFHRRPTAASRSSASPRSLTS 584


>BE556691 
          Length = 386

 Score = 33.1 bits (74), Expect = 0.22
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = +2

Query: 342 KPCIFFNSSRG-CRNGANCTFQHDA---SFQPQQGNPSSGMHSSKR 383
           KPC++F  +RG C+NG NC F H A   S     G+PS  +   ++
Sbjct: 17  KPCLYF--ARGFCKNGTNCKFLHGAFTDSLDAIVGSPSKQLEGMEQ 148


>AW704833 similar to GP|9719716|gb|A ESTs gb|AV518228  gb|AV519045
           gb|AV524928  gb|AV530358  gb|AV559044 come from this
           gene., partial (20%)
          Length = 405

 Score = 32.7 bits (73), Expect = 0.29
 Identities = 16/39 (41%), Positives = 26/39 (66%)
 Frame = +3

Query: 218 NTGSSSNVFSHPPNPFNQVETTTSSSNAFSSTSSYTHTT 256
           ++ ++S  FS P +P +QV   TSS+ A SST++ T T+
Sbjct: 285 SSAAASTTFSDPTSPSSQVAPPTSSTQAPSSTTTTTSTS 401


>TC221449 UP|Q9FXZ1 (Q9FXZ1) Resistance protein MG23 (Fragment), complete
          Length = 1307

 Score = 32.0 bits (71), Expect = 0.49
 Identities = 24/81 (29%), Positives = 45/81 (54%), Gaps = 4/81 (4%)
 Frame = -1

Query: 195 LNNPEVIEKLVRNYNVQNAQYAQN----TGSSSNVFSHPPNPFNQVETTTSSSNAFSSTS 250
           L+NP ++E  +     Q A   Q     T ++S V   PP+P+  + T  ++S+A +S S
Sbjct: 773 LSNPFLLEVSLTFSRKQQASKWQAMEL*TATASVVLPTPPSPW--IPTMWTTSSAPTSRS 600

Query: 251 SYTHTTGGQMAPTMSTQWHRR 271
            +T +T G  +PT +++ ++R
Sbjct: 599 DFTAST-GDFSPTRTSETYKR 540


>BG043313 similar to GP|9719716|gb| ESTs gb|AV518228  gb|AV519045
           gb|AV524928  gb|AV530358  gb|AV559044 come from this
           gene., partial (21%)
          Length = 420

 Score = 31.2 bits (69), Expect = 0.84
 Identities = 16/48 (33%), Positives = 27/48 (55%)
 Frame = +1

Query: 215 YAQNTGSSSNVFSHPPNPFNQVETTTSSSNAFSSTSSYTHTTGGQMAP 262
           Y+ ++ ++S   S P +PF+QV    SS++  SST+  T T     +P
Sbjct: 277 YSASSAAASTTSSDPTSPFSQVVPPMSSTHPPSSTTITTTTKPSSFSP 420


>BM528761 weakly similar to PIR|T39903|T399 serine-rich protein - fission
           yeast (Schizosaccharomyces pombe), partial (5%)
          Length = 433

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 28/106 (26%), Positives = 41/106 (38%)
 Frame = +2

Query: 152 DGSNTVTTMSMVSDVAAASVALTSLVKSSEHGNLIDPELLNDILNNPEVIEKLVRNYNVQ 211
           D  NT T     S V A+ +A+TS   +              +L + + I     N N  
Sbjct: 164 DNGNTETNKDTGSSVRASELAITSAAST--------------LLTSSKSIFNFGHNSNQN 301

Query: 212 NAQYAQNTGSSSNVFSHPPNPFNQVETTTSSSNAFSSTSSYTHTTG 257
           N     +T  S    S PP   N   +   SS++ ++TSS    TG
Sbjct: 302 NGSLLSSTSFS----SFPPPVSNNFTSQNISSSSSAATSSGISATG 427


>TC204634 similar to UP|Q7F8R0 (Q7F8R0) KH domain-containing protein-like,
           partial (67%)
          Length = 1248

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 20/60 (33%), Positives = 26/60 (43%)
 Frame = +1

Query: 304 DKQEALPYSSSNRQNQQPLSNYDTVHNFRAKGSKPKISKPCIFFNSSRGCRNGANCTFQH 363
           D++   P ++ N       S  +T       GSK   SKPC  F S+ GC  G  C F H
Sbjct: 202 DRKRGRPEAAFNFNGGAKKSRPETDSFPTGLGSK---SKPCTKFFSTSGCPFGEGCHFLH 372



 Score = 29.6 bits (65), Expect = 2.4
 Identities = 16/52 (30%), Positives = 26/52 (49%), Gaps = 2/52 (3%)
 Frame = +1

Query: 335 GSKPKISKP--CIFFNSSRGCRNGANCTFQHDASFQPQQGNPSSGMHSSKRM 384
           GS P + K   C  FN++ GC+ G  C F H    + + G P++  +   R+
Sbjct: 478 GSSPPVVKTRLCNKFNTAEGCKFGDKCHFAHG---EWELGRPTAPSYEDPRV 624


>TC229531 similar to UP|Q9LV00 (Q9LV00) Emb|CAB85555.1, partial (33%)
          Length = 1249

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 17/52 (32%), Positives = 23/52 (43%)
 Frame = +3

Query: 228 HPPNPFNQVETTTSSSNAFSSTSSYTHTTGGQMAPTMSTQWHRRPEISSAIA 279
           H P+PF      T    +FSS+SS + +      P  ST  H  P +S   A
Sbjct: 195 HFPSPFLSKPKPTYLFTSFSSSSSSSSSFFSSTTPPRSTMLHHDPLVSDVYA 350


>TC204636 similar to UP|Q7F8R0 (Q7F8R0) KH domain-containing protein-like,
           partial (21%)
          Length = 654

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 16/52 (30%), Positives = 26/52 (49%), Gaps = 2/52 (3%)
 Frame = +1

Query: 335 GSKPKISKP--CIFFNSSRGCRNGANCTFQHDASFQPQQGNPSSGMHSSKRM 384
           GS P + K   C  FN++ GC+ G  C F H    + + G P++  +   R+
Sbjct: 433 GSSPPVVKTRLCNKFNTAEGCKFGDKCHFAHG---EWELGRPTAPSYEDPRV 579


>BE806061 similar to GP|21595125|gb endosperm-specific protein-like protein
           {Arabidopsis thaliana}, partial (26%)
          Length = 355

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
 Frame = +3

Query: 221 SSSNVFSHPPNPFN------QVETTTSSSNAFSSTSSYTHTTGGQMAPTMSTQWHRRPEI 274
           SSS     PP P N      +  + ++SS+  S+T S T +     +P +ST+    P  
Sbjct: 150 SSSTTPPSPPWPQNTPSPSAKTSSASTSSSTTSTTQSSTRSPTAPRSPPLSTKPPAMPTA 329

Query: 275 SSAIAATP 282
           +SA + +P
Sbjct: 330 TSAPSTSP 353


>TC205434 homologue to UP|PRS6_ARATH (Q9SEI4) 26S protease regulatory subunit
           6B homolog (26S proteasome AAA-ATPase subunit RPT3)
           (Regulatory particle triple-A ATPase subunit 3), partial
           (96%)
          Length = 1573

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +2

Query: 229 PPNPFNQVETTTSSSNAFSSTSSYTHTTGGQMAPT-MSTQWHRRPEISSAIAATPVEVPS 287
           PP+P     ++  S+ +FSS    +H+T     PT  ST + RRP  +S  +A+P  + S
Sbjct: 401 PPDPTTTSGSSVPSTASFSSPPPPSHSTA---TPTRSSTFFRRRPTPASRSSASPRSLTS 571


>BE823346 weakly similar to GP|29467561|db P0672D01.15 {Oryza sativa
           (japonica cultivar-group)}, partial (68%)
          Length = 617

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 341 SKPCIFFNSSRGCRNGANCTFQHDASFQP 369
           S   +F NSS  C N ANC F    + +P
Sbjct: 228 SSSIVFCNSSTTCNNSANCFFLSSNNLEP 314


>AI461225 similar to GP|15983444|gb| AT3g02950/F13E7_10 {Arabidopsis
           thaliana}, partial (19%)
          Length = 393

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 341 SKPCIFFNSSRGCRNGANCTFQHDASFQP 369
           S   +F NSS  C N ANC F    + +P
Sbjct: 296 SSSIVFCNSSTTCNNSANCFFLSSNNLEP 382


>TC218124 
          Length = 658

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 23/77 (29%), Positives = 37/77 (47%), Gaps = 14/77 (18%)
 Frame = -3

Query: 220 GSSSNVFSHPPNPFNQVETTTSSSNAFSSTSSY-------------THTTGGQMAPTMST 266
           G  S+  S    PFN   T++SSS++ SS+SS              + ++G  +  ++S 
Sbjct: 494 GRESSKESREAKPFNLE*TSSSSSSSLSSSSSLWFLLDETTSFSSSSLSSGVPIEDSLSE 315

Query: 267 QW-HRRPEISSAIAATP 282
           +W  + P   SA  ATP
Sbjct: 314 EWPEKSPYGRSAAVATP 264


>TC204897 similar to UP|Q8W419 (Q8W419) Twin LOV protein 1, partial (59%)
          Length = 1749

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 22/69 (31%), Positives = 33/69 (46%), Gaps = 1/69 (1%)
 Frame = +3

Query: 222 SSNVFSHPPNPFNQVETTTSSSNAFSSTSS-YTHTTGGQMAPTMSTQWHRRPEISSAIAA 280
           S+N  +  P+P      T SSS A +S+SS  T +      P  S++ H  PE   +  A
Sbjct: 447 SANCLTASPSPTPPSPATPSSSPARASSSSRATPSAKSWAGPQPSSRAHEHPENP*SKFA 626

Query: 281 TPVEVPSTK 289
            P+E   T+
Sbjct: 627 RPLERSETR 653


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.311    0.128    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,249,341
Number of Sequences: 63676
Number of extensions: 252689
Number of successful extensions: 1296
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of query: 391
length of database: 12,639,632
effective HSP length: 99
effective length of query: 292
effective length of database: 6,335,708
effective search space: 1850026736
effective search space used: 1850026736
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)