
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148485.6 + phase: 0
(380 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC227083 322 2e-88
TC216743 similar to UP|Q9LJE0 (Q9LJE0) Gb|AAC16072.1 (AT3g13510/... 310 5e-85
TC220712 similar to UP|Q6Z1P7 (Q6Z1P7) Carboxyl-terminal peptida... 164 2e-53
TC208887 similar to UP|Q9FG96 (Q9FG96) Gb|AAF04872.1 (AT5g50150/... 191 6e-49
AW705448 167 7e-42
TC212563 similar to UP|Q6Z1P7 (Q6Z1P7) Carboxyl-terminal peptida... 84 1e-32
AW831572 131 4e-31
TC216742 similar to UP|Q9LJE0 (Q9LJE0) Gb|AAC16072.1 (AT3g13510/... 101 6e-22
TC223844 similar to UP|Q84VY0 (Q84VY0) At1g70550, partial (30%) 100 1e-21
BG156349 87 1e-17
TC222387 similar to UP|Q84VY0 (Q84VY0) At1g70550, partial (32%) 86 4e-17
BI969205 85 6e-17
BU084168 46 2e-07
BE329748 51 1e-06
TC234496 similar to UP|Q84VY0 (Q84VY0) At1g70550, partial (9%) 45 5e-05
TC230560 similar to UP|Q84VY0 (Q84VY0) At1g70550, partial (16%) 43 2e-04
TC218931 weakly similar to UP|Q6PFV0 (Q6PFV0) Zgc:63874, partial... 32 0.62
TC206033 similar to UP|Q9LUA0 (Q9LUA0) Gb|AAF16548.1 (AT3g25910/... 29 3.1
TC208809 similar to UP|Q9LJ91 (Q9LJ91) Gb|AAD31369.1, partial (24%) 29 4.0
TC218059 weakly similar to UP|Q84KQ9 (Q84KQ9) F-box, partial (7%) 28 5.2
>TC227083
Length = 1777
Score = 322 bits (825), Expect = 2e-88
Identities = 159/406 (39%), Positives = 250/406 (61%), Gaps = 34/406 (8%)
Frame = +2
Query: 9 MLLWAFFVAGAISLSETEIEAKLKLHNRPAVKTIKSENGDIIDCVDIYKQPAFDHPVLKN 68
M+L +A A S+ + E++ LK NRP V++IKS +GD+IDC+ + QPAFDHP LKN
Sbjct: 182 MVLVVVSLACADSIEKLEVQKHLKNLNRPPVRSIKSPDGDVIDCIHVSHQPAFDHPDLKN 361
Query: 69 HTIQT--------------------------WHKSGRCPKGTVPIRRIQKQDLLRAATLD 102
H IQ WH++GRCP GT+P+RR +K D+LRA+++
Sbjct: 362 HKIQMKPNFHPEGHPFGESKVSSNSKPITQPWHQNGRCPDGTIPVRRTKKDDMLRASSVQ 541
Query: 103 RFGLKQSSSFVNSKNTT-ISNFSKLSGSSNVVSEDHSGVHLATSGSNFIGAEADINVWNP 161
FG K+ SF K + + SG + ++ G + GA+A INVW+P
Sbjct: 542 HFGKKKDRSFPQPKPAKPLPDIISQSGHQHAIAY--------VEGDKYYGAKATINVWDP 697
Query: 162 KVDLPDDSTTAQIWLKAGN-GNEFESIEAGWMVNPGLYGNHDTRLFSYWTTDSYKSTGCF 220
K+ P++ + +Q+W+ G+ G + SIEAGW V+P LYG+++TRLF+YWT+D+Y++TGC+
Sbjct: 698 KIQQPNEFSLSQMWILGGSFGQDLNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCY 877
Query: 221 DLTCSGFVQTSNTVALGGGINPISSDSGTQYELNI-----DEVGHWWLKENHDIPIGYWP 275
+L CSGF+Q ++ +ALG I+P+S S +QY+++I + G+WW++ +D +GYWP
Sbjct: 878 NLLCSGFIQINSDIALGASISPLSKYSSSQYDISILVWKDPKEGNWWMQFGNDHVMGYWP 1057
Query: 276 VELFTSLKHSATLVQWGGQVFSSQVKKSPHTKTQMGSGHLADEKYGHACYMRNIRIKDNS 335
LF+ L SA++++WGG+V +S+ HT TQMGSGH +E +G A Y +NI+I D
Sbjct: 1058APLFSYLSDSASMIEWGGEVVNSE-SDGQHTSTQMGSGHFPEEGFGKASYFKNIQIVDGD 1234
Query: 336 LMLKYPESINVASQEPNCYSAFNDEDVQEPT-FYFGGPGQSSPSCP 380
L+ P+ + +++ +CY+ + FY+GGPG+ +P+CP
Sbjct: 1235NKLRAPKDLGTYTEQDSCYNVQTGSAGDWGSYFYYGGPGR-NPNCP 1369
>TC216743 similar to UP|Q9LJE0 (Q9LJE0) Gb|AAC16072.1 (AT3g13510/MRP15_15),
partial (90%)
Length = 1869
Score = 310 bits (795), Expect = 5e-85
Identities = 160/424 (37%), Positives = 252/424 (58%), Gaps = 50/424 (11%)
Frame = +3
Query: 6 VAIMLLWAFFV----AGAISLSETEIEAKLKLH--NRPAVKTIKSENGDIIDCVDIYKQP 59
V + LW + A +S S ++E L+ N+P VKTI+S +GD IDCV I KQP
Sbjct: 216 VLVFCLWGVLISLSSAARLSASRQKLEVAKHLNRLNKPPVKTIQSPDGDTIDCVPISKQP 395
Query: 60 AFDHPVLKNHTIQT------------------------------WHKSGRCPKGTVPIRR 89
AFDHP LK+H IQT WH +GRCP+ T+P+RR
Sbjct: 396 AFDHPFLKDHKIQTRPSFHPEGLFEENKLSEKPDAKTHTPITQLWHANGRCPEDTIPVRR 575
Query: 90 IQKQDLLRAATLDRFGLKQSSSFVNSKNTTISNFSKLSGSSNVVSED-HSGVHLATSGSN 148
+++D+LRA+++ R+G K+ + + S +++++ H G
Sbjct: 576 AKEEDVLRASSVKRYGRKKHRAIPKPR----------SAEPDLINQSGHQHAIAYVEGDK 725
Query: 149 FIGAEADINVWNPKVDLPDDSTTAQIWLKAGN-GNEFESIEAGWMVNPGLYGNHDTRLFS 207
+ GA+A INVW PK+ ++ + +Q+W+ G+ G + SIEAGW V+P LYG+++TRLF+
Sbjct: 726 YYGAKATINVWEPKIQQTNEFSLSQLWILGGSFGQDLNSIEAGWQVSPDLYGDNNTRLFT 905
Query: 208 YWTTDSYKSTGCFDLTCSGFVQTSNTVALGGGINPISSDSGTQYELNI-----DEVGHWW 262
YWT+D+Y++TGC++L CSGF+Q ++ +A+G I+P+S+ +Q++++I + GHWW
Sbjct: 906 YWTSDAYQATGCYNLLCSGFIQVNSEIAMGATISPVSAYRNSQFDISILIWKDPKEGHWW 1085
Query: 263 LKENHDIPIGYWPVELFTSLKHSATLVQWGGQVFSSQVKKSPHTKTQMGSGHLADEKYGH 322
++ +D +GYWP LF+ L SA++++WGG+V +S+ HT TQMGSGH +E +G
Sbjct: 1086MQFGNDYVLGYWPSFLFSYLADSASMIEWGGEVVNSE-PDGQHTSTQMGSGHFPEEGFGK 1262
Query: 323 ACYMRNIRIKDNSLMLKYPESINVASQEPNCYSAFNDEDVQEPT-------FYFGGPGQS 375
A Y RNI++ D+S LK P+ I +++ NCY DVQ + FY+GGPG+
Sbjct: 1263ASYFRNIQVVDSSNNLKAPKGIGTFTEQSNCY------DVQTGSNGDWGHYFYYGGPGK- 1421
Query: 376 SPSC 379
+P+C
Sbjct: 1422NPNC 1433
>TC220712 similar to UP|Q6Z1P7 (Q6Z1P7) Carboxyl-terminal peptidase-like,
partial (47%)
Length = 798
Score = 164 bits (416), Expect(2) = 2e-53
Identities = 70/155 (45%), Positives = 108/155 (69%), Gaps = 7/155 (4%)
Frame = +1
Query: 145 SGSNFIGAEADINVWNPKVDLPDDSTTAQIWLKAGN--GNEFESIEAGWMVNPGLYGNHD 202
S GA+A INVW+P + + ++ + +Q+W+ +G+ G + SIEAGW V+P LYG+
Sbjct: 40 SSQEMYGAKATINVWDPSIQVINEFSLSQLWILSGSFDGTDLNSIEAGWQVSPELYGDSR 219
Query: 203 TRLFSYWTTDSYKSTGCFDLTCSGFVQTSNTVALGGGINPISSDSGTQYELNI-----DE 257
RLF+YWT+DSY++TGC++L C+GF+QT++ +A+G I+P+SS G QY++ I +
Sbjct: 220 PRLFTYWTSDSYRATGCYNLLCAGFIQTNSRIAIGAAISPVSSYDGNQYDITILIWKDPK 399
Query: 258 VGHWWLKENHDIPIGYWPVELFTSLKHSATLVQWG 292
VG+WW+ + +GYWP ELFT L AT+V+WG
Sbjct: 400 VGNWWMSFGDNTLVGYWPAELFTHLADHATMVEWG 504
Score = 62.8 bits (151), Expect(2) = 2e-53
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +3
Query: 293 GQVFSSQVKKSPHTKTQMGSGHLADEKYGHACYMRNIRIKDNSLMLKYPESINVASQEPN 352
G+V +S+ HT TQMGSGH A++ +G A Y RN++ D L + I+ ++ N
Sbjct: 507 GKVVNSRTN-GQHTFTQMGSGHFAEDGFGKASYFRNLQTVDTDNNLSSVQGISTLAENTN 683
Query: 353 CYSAFNDEDVQEPT-FYFGGPGQSSPSCP 380
CY + + T FY+GGPG ++P CP
Sbjct: 684 CYDIKSYYSNEWGTYFYYGGPG-NNPQCP 767
>TC208887 similar to UP|Q9FG96 (Q9FG96) Gb|AAF04872.1 (AT5g50150/MPF21_17),
partial (54%)
Length = 769
Score = 191 bits (484), Expect = 6e-49
Identities = 94/227 (41%), Positives = 145/227 (63%), Gaps = 7/227 (3%)
Frame = +2
Query: 161 PKVDLPDDSTTAQIWLKAGN-GNEFESIEAGWMVNPGLYGNHDTRLFSYWTTDSYKSTGC 219
P V P + + +QIW+ AG+ GN+ +IEAGW V+P LYG++ R F+YWTTD+Y++TGC
Sbjct: 2 PSVTDPYEFSLSQIWVIAGSFGNDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGC 181
Query: 220 FDLTCSGFVQTSNTVALGGGINPISSDSGTQYELNI-----DEVGHWWLKENHDIPIGYW 274
++L CSGFVQT+N +A+G I+P S +G Q+++ + + GHWWL+ + +GYW
Sbjct: 182 YNLLCSGFVQTNNRIAIGAAISPRSIYNGRQFDIGLMVWKDPKHGHWWLEFGSGLLVGYW 361
Query: 275 PVELFTSLKHSATLVQWGGQVFSSQVKKSPHTKTQMGSGHLADEKYGHACYMRNIRIKDN 334
P LF+ L++ A++VQ+GG++ +S+ + HT TQMGSGH + E + A Y RN+++ D
Sbjct: 362 PAYLFSHLRNHASMVQFGGEIVNSR-SRGYHTGTQMGSGHFSGEGFRKAAYFRNLQVVDW 538
Query: 335 SLMLKYPESINVASQEPNCYS-AFNDEDVQEPTFYFGGPGQSSPSCP 380
L +I+ + NCY V FY+GGPG+ + CP
Sbjct: 539 DNNLLPLSNIHQLADHSNCYDIRMGSNSVWGTYFYYGGPGR-NVRCP 676
>AW705448
Length = 424
Score = 167 bits (423), Expect = 7e-42
Identities = 81/138 (58%), Positives = 101/138 (72%), Gaps = 7/138 (5%)
Frame = +2
Query: 209 WTTDSYKSTGCFDLTCSGFVQTSNTVALGGGINPISSDSGTQYELNID-----EVGHWWL 263
WT DSY+S GCFDLTC GFVQT VALG I PISS G QYELN+ + G+W+L
Sbjct: 14 WTRDSYRSIGCFDLTCPGFVQTGQ-VALGASIGPISSIMGPQYELNVGLFLEPDSGNWYL 190
Query: 264 KENHDIPIGYWPVELFTSLKHSATLVQWGGQVFSSQVK--KSPHTKTQMGSGHLADEKYG 321
K +++P+GYWP E+ SL HSA LV+WGGQV S+ +K +SPHT T+MGSGH A ++
Sbjct: 191 KIKNNVPVGYWPAEILGSLTHSAILVEWGGQVSSTNIKNHESPHTGTEMGSGHAASGRFQ 370
Query: 322 HACYMRNIRIKDNSLMLK 339
+AC+MRN+RIKD SL LK
Sbjct: 371 NACFMRNVRIKDYSLQLK 424
>TC212563 similar to UP|Q6Z1P7 (Q6Z1P7) Carboxyl-terminal peptidase-like,
partial (26%)
Length = 547
Score = 84.3 bits (207), Expect(2) = 1e-32
Identities = 51/125 (40%), Positives = 73/125 (57%), Gaps = 5/125 (4%)
Frame = +2
Query: 72 QTWHKSG-RCPKGTVPIRRIQKQDLLRAATLDRFGLKQSSSFVNSKNTTISNFSKLSGSS 130
Q WHK+G RCPKGTVPIRR D+LRA +L FG KQ + + S +
Sbjct: 41 QMWHKNGTRCPKGTVPIRRSTVHDVLRAKSLFDFGKKQRRFRLTGR----------SDAP 190
Query: 131 NVVSEDHSGVHLATSGSN--FIGAEADINVWNPKVDLPDDSTTAQIWLKAG--NGNEFES 186
+VVS + +A +GS+ GA+A INVW P + + ++ + +QIW+ +G +G + S
Sbjct: 191 DVVSGNGHEHAIAYTGSSQEVYGAKATINVWEPSIQVVNEFSLSQIWILSGSFDGTDLNS 370
Query: 187 IEAGW 191
IEAGW
Sbjct: 371 IEAGW 385
Score = 73.9 bits (180), Expect(2) = 1e-32
Identities = 30/54 (55%), Positives = 43/54 (79%)
Frame = +3
Query: 190 GWMVNPGLYGNHDTRLFSYWTTDSYKSTGCFDLTCSGFVQTSNTVALGGGINPI 243
G V+P LYG+ RLF+YWT+DSY++TGC++L C+GFVQT+ +A+G I+PI
Sbjct: 384 GSQVSPELYGDSRPRLFTYWTSDSYQATGCYNLLCAGFVQTNGRIAIGAAISPI 545
>AW831572
Length = 511
Score = 131 bits (330), Expect = 4e-31
Identities = 67/178 (37%), Positives = 107/178 (59%), Gaps = 12/178 (6%)
Frame = +2
Query: 214 YKSTGCFDLTCSGFVQTSNTVALGGGINPISSDSGTQYELNI----DEV-GHWWLKENHD 268
YK+TGC+ L CSG +Q ++ +A+G I+P+S +Q++++I D + GHWW++ +D
Sbjct: 2 YKATGCYSLLCSGCMQVNSEIAMGATISPVSGCRNSQFDISILIWKDPIEGHWWMQFGND 181
Query: 269 IPIGYWPVELFTSLKHSATLVQWGGQVFSSQVKKSPHTKTQMGSGHLADEKYGHACYMRN 328
+GYWP LF+ L SA++++WGG+ +S+ HT +QMGSGH++DE G ACY ++
Sbjct: 182 YVLGYWPSVLFSYLADSASMIEWGGEAVNSE-PDGQHTSSQMGSGHISDEGLG*ACYFKS 358
Query: 329 IRIKDNSLMLKYPESINVASQEPNCYSAFNDEDVQEPT-------FYFGGPGQSSPSC 379
I + D S K I + NCY DVQ + ++GGPG+ +P+C
Sbjct: 359 IHVVDRSNDHKAARGIGSFTDHSNCY------DVQTGSNWGWGHYCHYGGPGE-NPNC 511
>TC216742 similar to UP|Q9LJE0 (Q9LJE0) Gb|AAC16072.1 (AT3g13510/MRP15_15),
partial (31%)
Length = 702
Score = 101 bits (251), Expect = 6e-22
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Frame = +1
Query: 261 WWLKENHDIPIGYWPVELFTSLKHSATLVQWGGQVFSSQVKKSPHTKTQMGSGHLADEKY 320
WW +D +GY P LF+ L SA++++WGG+V +S+ HT TQMGSGH +E +
Sbjct: 37 WWXXXGNDYVLGYXPSFLFSYLADSASMIEWGGEVVNSE-PDGQHTSTQMGSGHFPEEGF 213
Query: 321 GHACYMRNIRIKDNSLMLKYPESINVASQEPNCYSAFNDEDVQEPT-------FYFGGPG 373
G A Y RNI++ D+S LK P+ I +++ NCY DVQ + FY+GGPG
Sbjct: 214 GKASYFRNIQVVDSSNNLKAPKGIGTFTEQSNCY------DVQTGSNGDWGHYFYYGGPG 375
Query: 374 QSSPSC 379
+ +P+C
Sbjct: 376 K-NPNC 390
>TC223844 similar to UP|Q84VY0 (Q84VY0) At1g70550, partial (30%)
Length = 596
Score = 100 bits (248), Expect = 1e-21
Identities = 52/123 (42%), Positives = 74/123 (59%), Gaps = 1/123 (0%)
Frame = +3
Query: 259 GHWWLKENHDIPIGYWPVELFTSLKHSATLVQWGGQVFSSQVKKSPHTKTQMGSGHLADE 318
G+WWL+ I +GYWP LFT L+ A++VQ+GG++ +S+ S HT TQMGSGH A E
Sbjct: 30 GNWWLEFGSGILVGYWPSFLFTHLRDHASMVQFGGEIVNSRQSGS-HTSTQMGSGHFASE 206
Query: 319 KYGHACYMRNIRIKDNSLMLKYPESINVASQEPNCYSAFND-EDVQEPTFYFGGPGQSSP 377
+G A Y RN+++ D L ++ V + PNCY +V FY+GGPG+ +
Sbjct: 207 GFGKASYFRNMQVVDWDNNLVPLSNLRVLADHPNCYDIQGGINNVWGNYFYYGGPGR-NV 383
Query: 378 SCP 380
CP
Sbjct: 384 RCP 392
>BG156349
Length = 414
Score = 87.0 bits (214), Expect = 1e-17
Identities = 50/134 (37%), Positives = 76/134 (56%), Gaps = 2/134 (1%)
Frame = +3
Query: 70 TIQTWHKSGR-CPKGTVPIRRIQKQDLLRAATLDRFGLKQSSSFVNSKNTTISNFSKLSG 128
+ Q W SG CP+GTVPIRR ++D+LRA+++ RFG K + S SG
Sbjct: 63 SFQLWSDSGEACPEGTVPIRRTTEEDILRASSIQRFG---------RKPRPVRRDSTGSG 215
Query: 129 SSNVVSEDHSGVHLATSGSNFIGAEADINVWNPKVDLPDDSTTAQIWLKAGN-GNEFESI 187
+ V + +G + GA+A INVW P+V + + +Q+W+ AG+ G + +I
Sbjct: 216 HEHAV--------VFVNGDQYYGAKASINVWAPRVTDEFEFSLSQMWVIAGSFGKDLNTI 371
Query: 188 EAGWMVNPGLYGNH 201
EAGW V+P LYG++
Sbjct: 372 EAGWQVSPQLYGDN 413
>TC222387 similar to UP|Q84VY0 (Q84VY0) At1g70550, partial (32%)
Length = 529
Score = 85.5 bits (210), Expect = 4e-17
Identities = 50/104 (48%), Positives = 60/104 (57%), Gaps = 23/104 (22%)
Frame = +2
Query: 27 IEAKLKLHNRPAVKTIKSENGDIIDCVDIYKQPAFDHPVL------------KNHT---- 70
I L N+PAVKTIKS +GD+IDCV ++QPAFDHP L K HT
Sbjct: 134 IRTHLNKSNKPAVKTIKSPDGDLIDCVLSHQQPAFDHPQLKGQRPLDPPERPKGHTHTNG 313
Query: 71 ------IQTWHKSGR-CPKGTVPIRRIQKQDLLRAATLDRFGLK 107
Q W SG CP+GTVPIRR +QD LRA+++ RFG K
Sbjct: 314 ETVIESFQLWTDSGEACPEGTVPIRRTTEQDFLRASSVRRFGRK 445
>BI969205
Length = 714
Score = 84.7 bits (208), Expect = 6e-17
Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
Frame = -3
Query: 261 WWLKENHDIPIGYWPVELFTSLKHSATLVQWGGQVFSSQVKKSPHTKTQMGSGHLADEKY 320
W + +D +GYWP L SA++++WGG V +S+ HT TQMGSGH + Y
Sbjct: 685 WXXQFGNDYVLGYWPSFLXXYPDDSASMIEWGGAVVNSE-HDGQHTSTQMGSGHFPEXGY 509
Query: 321 GHACYMRNIRIKDNSLMLKYPESINVASQEPNCYSAFNDEDVQEPT-------FYFGGPG 373
G A Y R IR+ D+S LK + I ++ N Y DVQ + FY+GGPG
Sbjct: 508 GKASYFRGIRVVDSSNNLKAVKGIGTFIEQSNWY------DVQSASNGDWGHYFYYGGPG 347
Query: 374 QSSPSC 379
+ +P+C
Sbjct: 346 K-NPNC 332
>BU084168
Length = 421
Score = 46.2 bits (108), Expect(2) = 2e-07
Identities = 19/48 (39%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +2
Query: 145 SGSNFIGAEADINVWNPKVDLPDDSTTAQIWLKAGN-GNEFESIEAGW 191
+G + G++A INVW P V+ P + + +Q+W+ +G+ G++ +IEAGW
Sbjct: 23 TGDQYYGSKASINVWAPLVENPYEFSLSQMWVISGSFGDDLNTIEAGW 166
Score = 35.8 bits (81), Expect = 0.033
Identities = 13/21 (61%), Positives = 18/21 (84%)
Frame = +1
Query: 208 YWTTDSYKSTGCFDLTCSGFV 228
Y TD+Y++TGC++L CSGFV
Sbjct: 358 YLQTDAYQATGCYNLLCSGFV 420
Score = 26.6 bits (57), Expect(2) = 2e-07
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 194 NPGLYGNHDTRLFSYWTTDSY 214
+P LYG+ R F+YWT +
Sbjct: 168 SPELYGDSYPRFFTYWTVSKF 230
>BE329748
Length = 402
Score = 50.8 bits (120), Expect = 1e-06
Identities = 24/70 (34%), Positives = 40/70 (56%), Gaps = 1/70 (1%)
Frame = +1
Query: 312 SGHLADEKYGHACYMRNIRIKDNSLMLKYPESINVASQEPNCYSAFNDEDVQEPT-FYFG 370
SGH +E +G A Y +NI+I D L+ P+ + +++ +CY+ FY+G
Sbjct: 178 SGHFPEEGFGKASYFKNIQIVDGDNKLRAPKDLGTYTEQDSCYNVQTGSAGDWGNYFYYG 357
Query: 371 GPGQSSPSCP 380
GPG+ +P+CP
Sbjct: 358 GPGR-NPNCP 384
>TC234496 similar to UP|Q84VY0 (Q84VY0) At1g70550, partial (9%)
Length = 781
Score = 45.1 bits (105), Expect = 5e-05
Identities = 17/29 (58%), Positives = 25/29 (85%)
Frame = +2
Query: 41 TIKSENGDIIDCVDIYKQPAFDHPVLKNH 69
+++S +GD+IDCV ++QPAFDHP+LK H
Sbjct: 647 SLQSPDGDVIDCVVSHQQPAFDHPMLKGH 733
>TC230560 similar to UP|Q84VY0 (Q84VY0) At1g70550, partial (16%)
Length = 596
Score = 43.1 bits (100), Expect = 2e-04
Identities = 20/34 (58%), Positives = 24/34 (69%), Gaps = 2/34 (5%)
Frame = +2
Query: 305 HTKTQMGSGHLADEKYGHACYMRNIRI--KDNSL 336
HT TQMGSGH AD+ +G + Y RN+ I DNSL
Sbjct: 2 HTSTQMGSGHFADDGFGKSSYFRNLEIVDTDNSL 103
Score = 28.9 bits (63), Expect = 4.0
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 329 IRIKDNSLMLKYPESINVASQEPNCYSAFNDEDVQEPT-FYFGGPGQSSPSCP 380
+R+ +++L +I ++ NCY + + T FY+GGPG ++P CP
Sbjct: 75 LRL*TPTIVLAPVHNILTLAENTNCYDIKSSYSNEWGTYFYYGGPG-NNPLCP 230
>TC218931 weakly similar to UP|Q6PFV0 (Q6PFV0) Zgc:63874, partial (5%)
Length = 891
Score = 31.6 bits (70), Expect = 0.62
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Frame = +3
Query: 157 NVWNPKVDLPDDSTTAQIWLKAGNGNEFESIEAGWMVNPGLYGNHDTRLFS-YWTTDSYK 215
NV K+ D T ++W G + A W L G HD +FS +W+ +
Sbjct: 24 NVSGDKMVTCSDDLTLKVWETESVGTQSGGGFAPWTHLCTLSGYHDRTIFSVHWSREGIF 203
Query: 216 STGCFDLTCSGFVQTSNTVALGGGINPISSDSGTQYELNIDEV 258
++G D FV N +GG + + ++++I+ V
Sbjct: 204 ASGAADNAIRLFVD-DNESQVGGPLYKLLLKKEKAHDMDINSV 329
>TC206033 similar to UP|Q9LUA0 (Q9LUA0) Gb|AAF16548.1 (AT3g25910/MPE11_6),
partial (40%)
Length = 1468
Score = 29.3 bits (64), Expect = 3.1
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +2
Query: 200 NHDTRLFSYWTTDSYKSTGCFDLTCSGFVQTSNTV 234
+H+ Y SY+ + C D C F TS+T+
Sbjct: 512 SHEKGCRPYMCNTSYRHSNCLDQFCKSFADTSSTI 616
>TC208809 similar to UP|Q9LJ91 (Q9LJ91) Gb|AAD31369.1, partial (24%)
Length = 1786
Score = 28.9 bits (63), Expect = 4.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 61 FDHPVLKNHTIQTWHKSGRCPKGTVPI 87
FDHP+L+ H++ T + +CP V +
Sbjct: 1026 FDHPLLQQHSLVTAFTAAKCPLSPVHV 946
>TC218059 weakly similar to UP|Q84KQ9 (Q84KQ9) F-box, partial (7%)
Length = 1185
Score = 28.5 bits (62), Expect = 5.2
Identities = 10/19 (52%), Positives = 13/19 (67%)
Frame = +3
Query: 262 WLKENHDIPIGYWPVELFT 280
WLKE + IGYW EL++
Sbjct: 576 WLKETDEREIGYWSAELYS 632
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.315 0.132 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,139,961
Number of Sequences: 63676
Number of extensions: 251092
Number of successful extensions: 1254
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of query: 380
length of database: 12,639,632
effective HSP length: 99
effective length of query: 281
effective length of database: 6,335,708
effective search space: 1780333948
effective search space used: 1780333948
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Medicago: description of AC148485.6