BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148484.9 + phase: 0
(502 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC209000 similar to UP|RU17_ARATH (Q42404) U1 small nuclear ribo... 341 5e-94
TC219663 similar to GB|AAA36308.1|386949|HUMMHRD5 MHC HLA-RD pro... 301 4e-82
TC233791 similar to GB|AAD12776.1|1354466|ATU52910 U1 snRNP 70K ... 202 3e-52
BQ630406 192 4e-49
TC209001 similar to GB|AAD12776.1|1354466|ATU52910 U1 snRNP 70K ... 166 2e-41
AW132790 134 7e-32
TC225004 118 5e-27
TC217193 similar to UP|Q7XJN2 (Q7XJN2) At2g40650 protein, partia... 105 4e-23
TC212455 weakly similar to UP|Q7QIA8 (Q7QIA8) AgCP3984 (Fragment... 97 2e-20
TC230104 similar to UP|Q940U9 (Q940U9) AT5g17440/K3M16_10, parti... 95 8e-20
BI700844 similar to SP|Q42404|RU17_ U1 small nuclear ribonucleop... 94 1e-19
TC231263 92 7e-19
TC219167 similar to GB|AAA36308.1|386949|HUMMHRD5 MHC HLA-RD pro... 90 3e-18
TC219166 similar to GB|AAA36308.1|386949|HUMMHRD5 MHC HLA-RD pro... 85 7e-17
TC205462 similar to GB|AAN28790.1|23505861|AY143851 At5g64200/MS... 84 1e-16
TC221749 weakly similar to UP|Q16560 (Q16560) U1-snRNP binding p... 82 6e-16
TC225188 similar to UP|Q9FYB7 (Q9FYB7) Splicing factor-like prot... 81 1e-15
TC205461 similar to GB|AAN28790.1|23505861|AY143851 At5g64200/MS... 81 1e-15
BQ611667 similar to GP|29421114|dbj ADP-glucose pyrophosphorylas... 80 3e-15
TC209076 similar to UP|Q7Q9S9 (Q7Q9S9) EbiP3404 (Fragment), part... 79 6e-15
>TC209000 similar to UP|RU17_ARATH (Q42404) U1 small nuclear
ribonucleoprotein 70 kDa (U1 snRNP 70 kDa) (snRNP70)
(U1-70K), partial (42%)
Length = 689
Score = 341 bits (874), Expect = 5e-94
Identities = 163/181 (90%), Positives = 173/181 (95%)
Frame = +3
Query: 3 DPLLRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKR 62
D +RNQNAAVQARTKAQNR+NVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKR
Sbjct: 147 DAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKR 326
Query: 63 KCPPLTGMAQFVSKFAEPGEPEYSPPVPVVETPAERRARVHKLRLEKGAAKAAEELEKYD 122
KCPPL+GMAQFVSKFAEPGEPEY+PPVP ETPA++RAR+HKLRLEKGAAKAAEELEKYD
Sbjct: 327 KCPPLSGMAQFVSKFAEPGEPEYAPPVPETETPAQKRARIHKLRLEKGAAKAAEELEKYD 506
Query: 123 PHNDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIE 182
PHNDPN+SGDPYKTLFVA+LSYETTESRIKREFESYG IKRVRLV D + NKPRGYAFIE
Sbjct: 507 PHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDINKPRGYAFIE 686
Query: 183 Y 183
Y
Sbjct: 687 Y 689
>TC219663 similar to GB|AAA36308.1|386949|HUMMHRD5 MHC HLA-RD protein {Homo
sapiens;} , partial (14%)
Length = 1176
Score = 301 bits (771), Expect = 4e-82
Identities = 148/238 (62%), Positives = 176/238 (73%), Gaps = 1/238 (0%)
Frame = +3
Query: 266 ADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDR 325
+ RDRE SRERG+D+DRERERSRE S ++ RDRD HREDRHHRDRDRNRDRDR
Sbjct: 264 SSRDREISRERGRDKDRERERSREHSHERVRDRD--HREDRHHRDRDRNRDRDR------ 419
Query: 326 ERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKDYEVGETDRGRSHDRGAD 385
DR RDR+RGRDRDR R+RDR+R RD +RD E+DR+RE+D+DYEVG+ DRGRS DR +D
Sbjct: 420 --DRERDRDRGRDRDRTRDRDRERGRDRDRDREYDRHRERDRDYEVGDPDRGRSRDRESD 593
Query: 386 YDHVESKHEKEPHGEIERDYEPDDHHGRYKEPGHGHRHADPEHDPDHYNHYEHQRGRGQY 445
YD VESK HGE DYEP+D GR+ + HG RHADP+HDP+ Y+HY H
Sbjct: 594 YDRVESK-----HGERNHDYEPEDDRGRHNQYEHGRRHADPDHDPERYDHYNH------- 737
Query: 446 DEGDDRGD-YNQYPDHAKMEDDHHTERAKSKSRDRDRNRDKDHDYHRSERSHSREYDY 502
GDD GD YNQY DH MEDD+H RA S+S +++R+ D D +Y RSERSHSREYDY
Sbjct: 738 --GDDHGDHYNQYRDHDGMEDDYHAGRATSESHEKERSHDVDREYQRSERSHSREYDY 905
Score = 37.4 bits (85), Expect = 0.016
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +2
Query: 246 EQQQSGPSRSEEPRVREERHADR 268
EQQQS RSEEPRVRE+RHADR
Sbjct: 2 EQQQS---RSEEPRVREDRHADR 61
Score = 34.3 bits (77), Expect = 0.13
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -1
Query: 380 HDRGADYDHVE-SKHEKEPHGEIERDYEPDDHHGRYKEPGHGHRHADPEHDPDHYNHYEH 438
H A +DH + H+ PH I+ D+ +H + GH + P HD DH +H
Sbjct: 675 HTGYAYHDHPQVHSHDSFPHV*IQHDHNQTPYHVSVLDQGHQLHNLYPSHDVDHILDPDH 496
Score = 28.1 bits (61), Expect = 9.6
Identities = 27/109 (24%), Positives = 39/109 (35%), Gaps = 9/109 (8%)
Frame = -1
Query: 388 HVE-SKHEKEPHGEIERDYEPDDHHGRYKE------PGHGHRHADPEHDPDHYNHYEHQR 440
HV+ H HG D + + HHG + GH H Y +++H +
Sbjct: 813 HVQHGSHLPSHHGH---DTDCNGHHGHLHDCSGHTAQGHDQGLHAYVHVHTGYAYHDHPQ 643
Query: 441 --GRGQYDEGDDRGDYNQYPDHAKMEDDHHTERAKSKSRDRDRNRDKDH 487
+ + D+NQ P H + D H S D D D DH
Sbjct: 642 VHSHDSFPHV*IQHDHNQTPYHVSVLDQGHQLHNLYPSHDVDHILDPDH 496
>TC233791 similar to GB|AAD12776.1|1354466|ATU52910 U1 snRNP 70K truncated
protein {Arabidopsis thaliana;} , partial (58%)
Length = 423
Score = 202 bits (514), Expect = 3e-52
Identities = 104/152 (68%), Positives = 115/152 (75%)
Frame = +3
Query: 3 DPLLRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKR 62
DPL+RNQNAAVQAR K QNRAN LQLKLIGQSHPTGLTANLL+LFEPRP L+YKPPPEKR
Sbjct: 48 DPLIRNQNAAVQARAKDQNRANALQLKLIGQSHPTGLTANLLRLFEPRPALDYKPPPEKR 227
Query: 63 KCPPLTGMAQFVSKFAEPGEPEYSPPVPVVETPAERRARVHKLRLEKGAAKAAEELEKYD 122
A++RAR+HKLRLEKGAAKAAEELEKYD
Sbjct: 228 NAH---------------------------R**AQKRARIHKLRLEKGAAKAAEELEKYD 326
Query: 123 PHNDPNISGDPYKTLFVARLSYETTESRIKRE 154
PHNDPN+SGDPYKTLF+ARLSYE+T+SR+KRE
Sbjct: 327 PHNDPNVSGDPYKTLFIARLSYESTDSRMKRE 422
>BQ630406
Length = 328
Score = 192 bits (487), Expect = 4e-49
Identities = 97/112 (86%), Positives = 103/112 (91%)
Frame = +1
Query: 194 KQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGDEVNQRHSGREQQQSGPS 253
KQADGRKI+GRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGG+EVNQRHSGREQQQ S
Sbjct: 7 KQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQ---S 177
Query: 254 RSEEPRVREERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHRED 305
RSEEPRVRE+RHADRDRE SRERG+D+DRERERSRE S + R RDRDHRED
Sbjct: 178 RSEEPRVREDRHADRDREISRERGRDKDRERERSREHSHE--RVRDRDHRED 327
Score = 42.7 bits (99), Expect = 4e-04
Identities = 24/71 (33%), Positives = 38/71 (52%)
Frame = +1
Query: 320 GKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKDYEVGETDRGRS 379
G E +R GR++++ R + DR +RD R++ +R R+KD++ E R S
Sbjct: 127 GGEEVNQRHSGREQQQSRSEEPRVREDRHADRD--REISRERGRDKDRE---RERSREHS 291
Query: 380 HDRGADYDHVE 390
H+R D DH E
Sbjct: 292 HERVRDRDHRE 324
>TC209001 similar to GB|AAD12776.1|1354466|ATU52910 U1 snRNP 70K truncated
protein {Arabidopsis thaliana;} , partial (42%)
Length = 397
Score = 166 bits (421), Expect = 2e-41
Identities = 77/86 (89%), Positives = 83/86 (95%)
Frame = +1
Query: 3 DPLLRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKR 62
D +RNQNAAVQARTKAQNR+NVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKR
Sbjct: 139 DAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKR 318
Query: 63 KCPPLTGMAQFVSKFAEPGEPEYSPP 88
KCPP +GMAQFVSKFA+PG+PEY+PP
Sbjct: 319 KCPPXSGMAQFVSKFAQPGDPEYAPP 396
>AW132790
Length = 402
Score = 134 bits (338), Expect = 7e-32
Identities = 67/103 (65%), Positives = 78/103 (75%)
Frame = +1
Query: 307 HHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKD 366
HHRDRDRNRDRDR DR RDR+RGRDRDR R+RDR+R RD +RD E+DR+RE+D
Sbjct: 133 HHRDRDRNRDRDR--------DRERDRDRGRDRDRTRDRDRERGRDRDRDREYDRHRERD 288
Query: 367 KDYEVGETDRGRSHDRGADYDHVESKHEKEPHGEIERDYEPDD 409
+DYEVG+ DRGRS DR +DYD VESK HGE DYEP+D
Sbjct: 289 RDYEVGDPDRGRSLDRESDYDLVESK-----HGERNHDYEPED 402
Score = 74.7 bits (182), Expect = 9e-14
Identities = 38/92 (41%), Positives = 57/92 (61%)
Frame = +1
Query: 263 ERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKE 322
+R +RDR++ RER +DR R+R+R+R+R ++ RDRDRD DRH R+R+RD + G
Sbjct: 142 DRDRNRDRDRDRERDRDRGRDRDRTRDRDRERGRDRDRDREYDRH---RERDRDYEVG-- 306
Query: 323 RDRERDRGRDRERGRDRDRGRERDRDRERDHE 354
+ DRGR +R D D + +R D+E
Sbjct: 307 ---DPDRGRSLDRESDYDLVESKHGERNHDYE 393
Score = 52.0 bits (123), Expect = 6e-07
Identities = 32/93 (34%), Positives = 46/93 (49%)
Frame = +1
Query: 242 HSGREQQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRD 301
H R++ + E R R R DR R++ RERG+DRDR+RE D+ R+RDRD
Sbjct: 136 HRDRDRNRDRDRDRERDRDRG-RDRDRTRDRDRERGRDRDRDRE------YDRHRERDRD 294
Query: 302 HREDRHHRDRDRNRDRDRGKERDRERDRGRDRE 334
+ R R +R+ D + +R D E
Sbjct: 295 YEVGDPDRGRSLDRESDYDLVESKHGERNHDYE 393
Score = 35.4 bits (80), Expect = 0.060
Identities = 17/46 (36%), Positives = 23/46 (49%), Gaps = 11/46 (23%)
Frame = +1
Query: 467 HHTERAKSKSRDRDRNRDKDHDYHRS-----------ERSHSREYD 501
HH +R +++ RDRDR RD+D R +R REYD
Sbjct: 133 HHRDRDRNRDRDRDRERDRDRGRDRDRTRDRDRERGRDRDRDREYD 270
Score = 32.7 bits (73), Expect = 0.39
Identities = 26/77 (33%), Positives = 35/77 (44%), Gaps = 12/77 (15%)
Frame = +1
Query: 438 HQRGRGQYDEGDDRGDYNQYPDHAKMEDDHHTERAKSKSRDRDRNRDKDHDYHRSE---- 493
H R R D DR D ++ D + D T R + + R RDR+RD+++D HR
Sbjct: 133 HHRDR---DRNRDR-DRDRERDRDRGRDRDRT-RDRDRERGRDRDRDREYDRHRERDRDY 297
Query: 494 --------RSHSREYDY 502
RS RE DY
Sbjct: 298 EVGDPDRGRSLDRESDY 348
Score = 29.3 bits (64), Expect = 4.3
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -3
Query: 393 HEKEPHGEIERDYEPDDHHGRYKEPGHGHRHADPEHDPDHYNHYEH 438
H+ PH I++D+ + + GH + P HD DH +H
Sbjct: 385 HDSFPHV*IQQDHNQTPYQVSVLDQGHQLHNLYPSHDVDHILDPDH 248
>TC225004
Length = 734
Score = 118 bits (296), Expect = 5e-27
Identities = 54/104 (51%), Positives = 81/104 (76%)
Frame = -2
Query: 264 RHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKER 323
RH +R+RE+ RER ++R+RERER RER ++ R+R+R+ R+R+R R+R+R +ER
Sbjct: 544 RHQERERERERERERERERERERERERERERERERERE-------RERERERERERERER 386
Query: 324 DRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDK 367
+RER+R R+RER R+R+R RER+R+RER+ ER+ E D YRE+D+
Sbjct: 385 ERERERERERERERERERERERERERERERERERERDSYRERDR 254
Score = 106 bits (264), Expect = 3e-23
Identities = 53/112 (47%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
Frame = -3
Query: 261 REERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRG 320
R ER +R+RE+ RER ++R+RERER RER ++ R+R+R+ R+R+R R+R+R
Sbjct: 537 RRERERERERERERERERERERERERERERERERERERERE-------RERERERERERE 379
Query: 321 KERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKD-YEV 371
+ER+RER+R R+RER R+R+R RER+R+RER+ E +E + R+ D YE+
Sbjct: 378 REREREREREREREREREREREREREREREREREIVIERETDRKCVLDGYEI 223
Score = 105 bits (262), Expect = 5e-23
Identities = 56/117 (47%), Positives = 81/117 (68%), Gaps = 1/117 (0%)
Frame = -3
Query: 252 PSRSEEPRVRE-ERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRD 310
P R+E RE ER +R+RE+ RER ++R+RERER RER ++ R+R+R+ RE R+
Sbjct: 561 PPRAEFGTRRERERERERERERERERERERERERERERERERERERERERE-RERERERE 385
Query: 311 RDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDK 367
R+R R+R+R +ER+RER+R R+RER R+R+R RER+ ER+ +R D Y DK
Sbjct: 384 REREREREREREREREREREREREREREREREREREIVIERETDRKCVLDGYEIPDK 214
Score = 105 bits (262), Expect = 5e-23
Identities = 54/127 (42%), Positives = 84/127 (65%), Gaps = 9/127 (7%)
Frame = -1
Query: 247 QQQSGPSRSEEPRVREERH---------ADRDREKSRERGKDRDRERERSRERSSDKARD 297
Q P+ + P + ++H A +RE+ RER ++R+RERER RER ++ R+
Sbjct: 626 QHDRSPAPCQVPPLTSQQHPFFHLVPNSAPGERERERERERERERERERERERERERERE 447
Query: 298 RDRDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDV 357
R+R+ RE R+R+R R+R+R +ER+RER+R R+RER R+R+R RER+R+RER+ ER +
Sbjct: 446 RERE-RERERERERERERERERERERERERERERERERERERERERERERERERERER*L 270
Query: 358 EHDRYRE 364
+R E
Sbjct: 269 *RERQIE 249
Score = 102 bits (255), Expect = 3e-22
Identities = 51/105 (48%), Positives = 77/105 (72%), Gaps = 3/105 (2%)
Frame = -3
Query: 275 ERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRE 334
E G R+RERER RER ++ R+R+R+ R+R+R R+R+R +ER+RER+R R+RE
Sbjct: 549 EFGTRRERERERERERERERERERERERE-----RERERERERERERERERERERERERE 385
Query: 335 RGRDRDRGRERDRDRERDHERDVEHDRYREKDKDYEV---GETDR 376
R R+R+R RER+R+RER+ ER+ E +R RE++++ E+ ETDR
Sbjct: 384 REREREREREREREREREREREREREREREREREREIVIERETDR 250
Score = 92.8 bits (229), Expect = 3e-19
Identities = 52/114 (45%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Frame = -2
Query: 241 RHSGREQQQSGPSRSEEPRVRE---ERHADRDREKSRERGKDRDRERERSRERSSDKARD 297
RH RE+++ E R RE ER +R+RE+ RER ++R+RERER RE R+
Sbjct: 544 RHQERERERERERERERERERERERERERERERERERERERERERERERERE------RE 383
Query: 298 RDRDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRER 351
R+R+ R+R+R R+R+R +ER+RER+R R+RER R+RD RERDR + R
Sbjct: 382 RERE-------RERERERERERERERERERERERERERERERDSYRERDR*KMR 242
Score = 87.0 bits (214), Expect = 2e-17
Identities = 45/103 (43%), Positives = 69/103 (66%)
Frame = -2
Query: 302 HREDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDR 361
H+E R+R+R R+R+R +ER+RER+R R+RER R+R+R RER+R+RER+ ER+ E +R
Sbjct: 541 HQERERERERERERERERERERERERERERERERERERERERERERERERERERERERER 362
Query: 362 YREKDKDYEVGETDRGRSHDRGADYDHVESKHEKEPHGEIERD 404
RE++++ E E +R R +R E + E+E ERD
Sbjct: 361 ERERERERE-RERERERERER-------ERERERERDSYRERD 257
Score = 84.0 bits (206), Expect = 1e-16
Identities = 44/102 (43%), Positives = 66/102 (64%)
Frame = -2
Query: 303 REDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRY 362
R R+R+R R+R+R +ER+RER+R R+RER R+R+R RER+R+RER+ ER+ E +R
Sbjct: 544 RHQERERERERERERERERERERERERERERERERERERERERERERERERERERERERE 365
Query: 363 REKDKDYEVGETDRGRSHDRGADYDHVESKHEKEPHGEIERD 404
RE+++ E +R R +R E + E+E E ERD
Sbjct: 364 RERER-----ERERERERER-------ERERERERERERERD 275
Score = 83.2 bits (204), Expect = 3e-16
Identities = 45/105 (42%), Positives = 69/105 (64%)
Frame = -2
Query: 309 RDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKD 368
R R + R+R+R +ER+RER+R R+RER R+R+R RER+R+RER+ ER+ E +R RE++++
Sbjct: 550 RIRHQERERERERERERERERERERERERERERERERERERERERERERERERERERERE 371
Query: 369 YEVGETDRGRSHDRGADYDHVESKHEKEPHGEIERDYEPDDHHGR 413
E E +R R +R E + E+E E ER+ E D + R
Sbjct: 370 RE-RERERERERER-------ERERERERERERERERERDSYRER 260
Score = 82.4 bits (202), Expect = 4e-16
Identities = 46/112 (41%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Frame = -3
Query: 240 QRHSGREQQQSGPSRSEEPRVRE-ERHADRDREKSRERGKDRDRERERSRERSSDKARDR 298
+R RE+++ E R RE ER +R+RE+ RER ++R+RERER RER
Sbjct: 531 ERERERERERERERERERERERERERERERERERERERERERERERERERER-------- 376
Query: 299 DRDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRE 350
R+R+R R+R+R +ER+RER+R R+RER R+R+ ER+ DR+
Sbjct: 375 ---------EREREREREREREREREREREREREREREREREIVIERETDRK 247
Score = 80.5 bits (197), Expect = 2e-15
Identities = 44/109 (40%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Frame = -2
Query: 240 QRHSGREQQQSGPSRSEEPRVRE-ERHADRDREKSRERGKDRDRERERSRERSSDKARDR 298
+R RE+++ E R RE ER +R+RE+ RER ++R+RERER RER ++ R+R
Sbjct: 517 ERERERERERERERERERERERERERERERERERERERERERERERERERERERERERER 338
Query: 299 DRDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDR 347
+ R+R+R R+R+R +ER+RERD R+R+R + R R R
Sbjct: 337 E---------RERERERERERERERERERDSYRERDR*KMRVRWLRNSR 218
Score = 78.6 bits (192), Expect = 6e-15
Identities = 41/101 (40%), Positives = 65/101 (63%), Gaps = 1/101 (0%)
Frame = -1
Query: 235 GDEVNQRHSGREQQQSGPSRSEEPRVRE-ERHADRDREKSRERGKDRDRERERSRERSSD 293
G+ +R RE+++ E R RE ER +R+RE+ RER ++R+RERER RER +
Sbjct: 536 GERERERERERERERERERERERERERERERERERERERERERERERERERERERERERE 357
Query: 294 KARDRDRDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRE 334
+ R+R+R+ R+R+R R+R+R +ER+RER R+R+
Sbjct: 356 RERERERE-------RERERERERERERERERER*L*RERQ 255
Score = 73.2 bits (178), Expect = 3e-13
Identities = 40/105 (38%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Frame = -3
Query: 231 TRVGGDEVNQRHSGREQQQSGPSRSEEPRVRE-ERHADRDREKSRERGKDRDRERERSRE 289
TR + +R RE+++ E R RE ER +R+RE+ RER ++R+RERER RE
Sbjct: 540 TRRERERERERERERERERERERERERERERERERERERERERERERERERERERERERE 361
Query: 290 RSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRE 334
R ++ R+R+R+ R+R+R R+R+R +ER+ +R DR+
Sbjct: 360 RERERERERERE-------REREREREREREREREIVIERETDRK 247
Score = 63.2 bits (152), Expect = 3e-10
Identities = 35/88 (39%), Positives = 53/88 (59%), Gaps = 1/88 (1%)
Frame = -2
Query: 240 QRHSGREQQQSGPSRSEEPRVRE-ERHADRDREKSRERGKDRDRERERSRERSSDKARDR 298
+R RE+++ E R RE ER +R+RE+ RER ++R+RERER RER ++ R+R
Sbjct: 463 ERERERERERERERERERERERERERERERERERERERERERERERERERERERERERER 284
Query: 299 DRDHREDRHHRDRDRNRDRDRGKERDRE 326
+RD +R+RDR + R R R+
Sbjct: 283 ERD-----SYRERDR*KMRVRWLRNSRQ 215
Score = 53.9 bits (128), Expect = 2e-07
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = -2
Query: 240 QRHSGREQQQSGPSRSEEPRVRE-ERHADRDREKSRERGKDRDRERERSRERSSDKARDR 298
+R RE+++ E R RE ER +R+RE+ RER ++R+RERER RER ++ R
Sbjct: 445 ERERERERERERERERERERERERERERERERERERERERERERERERERERERERDSYR 266
Query: 299 DRDHREDRHHRDRDRNRD 316
+RD + R R+ +D
Sbjct: 265 ERDR*KMRVRWLRNSRQD 212
>TC217193 similar to UP|Q7XJN2 (Q7XJN2) At2g40650 protein, partial (88%)
Length = 1691
Score = 105 bits (263), Expect = 4e-23
Identities = 88/270 (32%), Positives = 118/270 (43%), Gaps = 20/270 (7%)
Frame = +3
Query: 178 YAFIEYLHTRDMKAAYKQADGR-----------KIEGRRVLVDVERGRTVPNWRPRRLGG 226
Y ++E L+ K K ADG+ ++ + D+ R W LG
Sbjct: 558 YRYLEPLYNDYRKLRRKLADGQFALTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESLGS 737
Query: 227 GLGTTRVGGDEVNQRHSGREQQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERER 286
+ R S E+ E+ + D+ EK RG+ RER+R
Sbjct: 738 -----------LEPRRSALEEDFEEEEEKEDNEQPVDEIEDKAYEKDHYRGRSPTRERDR 884
Query: 287 SRERSSDKARDRDRDHREDR-HHRDRDRNRDRDRGKERDRERDRGRDRER---GRDRDRG 342
R S + RDRD D DR + R+R R RDRDR +ERDR+RDR R RE GRDR+ G
Sbjct: 885 DRRHDSHRHRDRDYDRDYDRDYDRERGRGRDRDRDRERDRDRDRYRLREEKDYGRDRE-G 1061
Query: 343 RERD-RDRERDHERDVEHDRYREKDKDYEVGETDRGRSHDRGADY--DHVESKHEKEPHG 399
RER+ R+++RD R H R R + +D R HD G DY H S HG
Sbjct: 1062RERERREKDRDRGRRRSHSRSRSRSRD--------RREHD-GGDYRKRHARSSVSPRRHG 1214
Query: 400 EIERDYEPDDHHGRYK--EPGHGHRHADPE 427
+ D EP + K + G H DPE
Sbjct: 1215DGLEDGEPKKKKKKEKKEKKDDGTDHPDPE 1304
Score = 63.2 bits (152), Expect = 3e-10
Identities = 47/164 (28%), Positives = 79/164 (47%), Gaps = 13/164 (7%)
Frame = +3
Query: 351 RDHERDVEHDRYREKDKDYEVGETDRGRSHDRGADYDHVESKHEKE-PHGEIE-RDYEPD 408
+D+ D+ R +++ +G + RS D++ E K + E P EIE + YE D
Sbjct: 669 KDYSCDIAMPRVKKRWTLESLGSLEPRRSALE-EDFEEEEEKEDNEQPVDEIEDKAYEKD 845
Query: 409 DHHGRY------KEPGH-GHRHADPEHDPDHYNHYEHQRGRGQYDEGDDRGDYNQYPDHA 461
+ GR ++ H HRH D ++D D+ Y+ +RGRG+ + D D ++
Sbjct: 846 HYRGRSPTRERDRDRRHDSHRHRDRDYDRDYDRDYDRERGRGRDRDRDRERDRDRDRYRL 1025
Query: 462 KMEDDHHTERA----KSKSRDRDRNRDKDHDYHRSERSHSREYD 501
+ E D+ +R + + +DRDR R + H RS RE+D
Sbjct: 1026REEKDYGRDREGRERERREKDRDRGRRRSHSRSRSRSRDRREHD 1157
>TC212455 weakly similar to UP|Q7QIA8 (Q7QIA8) AgCP3984 (Fragment), partial
(11%)
Length = 944
Score = 97.1 bits (240), Expect = 2e-20
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 14/228 (6%)
Frame = +1
Query: 261 REERHADRDREKSRERGKDR------DRERERSRERSSDKARDRDRDHREDRHHRDRDRN 314
R D D E+ R RG++ D RE S + +ARDRDR D DRD +
Sbjct: 127 RRRSDYDHDEERVRVRGREHGHGSVVDDRREYSTRYHNREARDRDRSRDRDV---DRDLH 297
Query: 315 RDR-----DRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKDY 369
R++ RGKE + E RG++RER R+R R R+ ++DR R+ E D + + +E+D+ +
Sbjct: 298 REKKQEETSRGKEIEWEHKRGKERERSRERYR-RDAEKDRSREREEDGDRRQEKERDRSW 474
Query: 370 E-VGETDRGRSHDRGADYDH-VESKHEKEPHGEIERDYEPDDHHGRYKEPGHGHRHADPE 427
+ V E DR R +R D + K +++P E DD + ++ +GH+ D
Sbjct: 475 DTVFERDRRREKERDRSRDRTIGGKRDRDPENE------RDDKNRERRDDRYGHKDRDTA 636
Query: 428 HDPDHYNHYEHQRGRGQYDEGDDRGDYNQYPDHAKMED-DHHTERAKS 474
+ D H H ++G+D GD +Y H++ E+ ++H ER ++
Sbjct: 637 NGKD--RHLRH-------EDGNDNGD--RYRKHSRHEENEYHWERKRN 747
Score = 92.8 bits (229), Expect = 3e-19
Identities = 76/231 (32%), Positives = 113/231 (48%), Gaps = 8/231 (3%)
Frame = +1
Query: 182 EYLHTRDMKAAYKQADGR-KIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGDEVNQ 240
EY H++ ++ Y + R ++ GR + G V + R +TR E
Sbjct: 109 EYAHSKRRRSDYDHDEERVRVRGR----EHGHGSVVDDRREY-------STRYHNREARD 255
Query: 241 RHSGREQQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERERSRERSSDKARDRDR 300
R R++ E+ + EE ++ E +RGK+R+R RER R R ++K R R+R
Sbjct: 256 RDRSRDRDVDRDLHREKKQ--EETSRGKEIEWEHKRGKERERSRERYR-RDAEKDRSRER 426
Query: 301 DHREDRHH-RDRDRNRDR--DRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDV 357
+ DR ++RDR+ D +R + R++ERDR RDR G RDR E +RD D R+
Sbjct: 427 EEDGDRRQEKERDRSWDTVFERDRRREKERDRSRDRTIGGKRDRDPENERD---DKNRER 597
Query: 358 EHDRYREKDKDYEVGETDRGRSHDRGADYDHVESKH----EKEPHGEIERD 404
DRY KD+D G+ DR H+ G D KH E E H E +R+
Sbjct: 598 RDDRYGHKDRDTANGK-DRHLRHEDGNDNGDRYRKHSRHEENEYHWERKRN 747
Score = 78.6 bits (192), Expect = 6e-15
Identities = 72/244 (29%), Positives = 102/244 (41%), Gaps = 17/244 (6%)
Frame = +1
Query: 272 KSRERGKDRDRERERSRERSSDKARDRDRDHRE-DRHHRDRDRNRDRDRGKERDRERDRG 330
K R G R RSR RS RDR R D + + R D D +ER R RG
Sbjct: 4 KYRMSGSSPSHGRYRSRSRSIGHTRDRSRSRSIIDEYAHSKRRRSDYDHDEER--VRVRG 177
Query: 331 RDRERGRDRDRGRE--------RDRDRERDHERDVEHDRYREKDKDYEVGETDRGR---- 378
R+ G D RE RDR+R +RDV+ D +REK ++ ET RG+
Sbjct: 178 REHGHGSVVDDRREYSTRYHNREARDRDRSRDRDVDRDLHREKKQE----ETSRGKEIEW 345
Query: 379 SHDRGADYDHVESKHEKEPHGEIERDYEPDDHHGRYKEPGHGHRHADPEHDPDHYNHYEH 438
H RG + + ++ ++ + R+ E D + KE R D + D E
Sbjct: 346 EHKRGKERERSRERYRRDAEKDRSREREEDGDRRQEKE---RDRSWDTVFERDRRREKER 516
Query: 439 QRGRGQYDEGD-DRGDYNQYPD-HAKMEDDH--HTERAKSKSRDRDRNRDKDHDYHRSER 494
R R + G DR N+ D + + DD H +R + +DR + +D R
Sbjct: 517 DRSRDRTIGGKRDRDPENERDDKNRERRDDRYGHKDRDTANGKDRHLRHEDGNDNGDRYR 696
Query: 495 SHSR 498
HSR
Sbjct: 697 KHSR 708
Score = 57.4 bits (137), Expect = 1e-08
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 24/149 (16%)
Frame = +1
Query: 240 QRHSGREQQQSGPSRSEEPRVRE-------ERHADRDREKSRERG----KDRDRERER-- 286
++ RE+++ G R E+ R R +R +++R++SR+R +DRD E ER
Sbjct: 403 EKDRSREREEDGDRRQEKERDRSWDTVFERDRRREKERDRSRDRTIGGKRDRDPENERDD 582
Query: 287 -SRERSSDKARDRDRD--HREDRH--HRDRDRNRDRDRGKERDRERDRGRDRERGRD--- 338
+RER D+ +DRD + +DRH H D + N DR R R E + +R+R D
Sbjct: 583 KNRERRDDRYGHKDRDTANGKDRHLRHEDGNDNGDRYRKHSRHEENEYHWERKRNSDNPV 762
Query: 339 ---RDRGRERDRDRERDHERDVEHDRYRE 364
G + D + +VE D E
Sbjct: 763 KVYNSMGSTAEVDESKLTSSEVEPDDLEE 849
>TC230104 similar to UP|Q940U9 (Q940U9) AT5g17440/K3M16_10, partial (24%)
Length = 763
Score = 94.7 bits (234), Expect = 8e-20
Identities = 54/115 (46%), Positives = 69/115 (59%), Gaps = 6/115 (5%)
Frame = +3
Query: 254 RSEEPRVREERHADR-----DREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHH 308
R + ++EER+ R D +S+ER +DRDRE R RE +R+R RDH DR
Sbjct: 165 REKLAELQEERNKSRKTDRLDDRRSKERSRDRDRESSRDRELGD--SRERGRDH--DRRS 332
Query: 309 RDRDRNRDRDRGKERDRERDRGRDRE-RGRDRDRGRERDRDRERDHERDVEHDRY 362
RD DR+ DRDRG +RDR+RD R R R R R R R R+R RD++R HDRY
Sbjct: 333 RDHDRHYDRDRGYDRDRDRDSDRTRSYDSRSRRRSRSRSRERSRDYDRHRRHDRY 497
Score = 64.7 bits (156), Expect = 9e-11
Identities = 41/108 (37%), Positives = 57/108 (51%), Gaps = 9/108 (8%)
Frame = +3
Query: 316 DRDRGKERDRERDRGRDRERGRDRDRGRERDRDRE--------RDHE-RDVEHDRYREKD 366
+R++ ++ DR DR R +ER RDRDR E RDRE RDH+ R +HDR+ ++D
Sbjct: 192 ERNKSRKTDRLDDR-RSKERSRDRDR--ESSRDRELGDSRERGRDHDRRSRDHDRHYDRD 362
Query: 367 KDYEVGETDRGRSHDRGADYDHVESKHEKEPHGEIERDYEPDDHHGRY 414
+ Y + DR R DR YD + + E RDY+ H RY
Sbjct: 363 RGY---DRDRDRDSDRTRSYDSRSRRRSRSRSRERSRDYDRHRRHDRY 497
Score = 48.1 bits (113), Expect = 9e-06
Identities = 36/103 (34%), Positives = 52/103 (49%), Gaps = 7/103 (6%)
Frame = +3
Query: 230 TTRVGGDEVNQRHSGREQQQS-----GPSRSEEPRVREERHADRDREKSRERG--KDRDR 282
T R+ +R R+++ S G SR E R + R D DR R+RG +DRDR
Sbjct: 213 TDRLDDRRSKERSRDRDRESSRDRELGDSR-ERGRDHDRRSRDHDRHYDRDRGYDRDRDR 389
Query: 283 ERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDR 325
+ +R+R S ++R R R R R+R+RD DR + DR
Sbjct: 390 DSDRTRSYDS-RSRRRSRS-------RSRERSRDYDRHRRHDR 494
Score = 47.8 bits (112), Expect = 1e-05
Identities = 45/175 (25%), Positives = 64/175 (35%)
Frame = +3
Query: 317 RDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKDYEVGETDR 376
R++ E ER++ R +R DR R +ER RDR+R+ RD E
Sbjct: 165 REKLAELQEERNKSRKTDRLDDR-RSKERSRDRDRESSRDRE-----------------L 290
Query: 377 GRSHDRGADYDHVESKHEKEPHGEIERDYEPDDHHGRYKEPGHGHRHADPEHDPDHYNHY 436
G S +RG D+D H++ HY
Sbjct: 291 GDSRERGRDHDRRSRDHDR---------------------------------------HY 353
Query: 437 EHQRGRGQYDEGDDRGDYNQYPDHAKMEDDHHTERAKSKSRDRDRNRDKDHDYHR 491
+ RG YD DR D + D R++ +SR R R R +D+D HR
Sbjct: 354 DRDRG---YDRDRDRDS-----DRTRSYD----SRSRRRSRSRSRERSRDYDRHR 482
Score = 33.9 bits (76), Expect = 0.17
Identities = 19/47 (40%), Positives = 24/47 (50%), Gaps = 6/47 (12%)
Frame = +3
Query: 459 DHAKMEDDH--HTERAKSKSRDRDRNRDKDHDY----HRSERSHSRE 499
DH + DH H +R + RDRDR+ D+ Y R RS SRE
Sbjct: 315 DHDRRSRDHDRHYDRDRGYDRDRDRDSDRTRSYDSRSRRRSRSRSRE 455
Score = 33.9 bits (76), Expect = 0.17
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
Frame = +3
Query: 434 NHYEHQRGRGQYDEGDDRGDYNQYPDHAKMEDDHHTERAKSKSRDRDR----------NR 483
+H+ + G + + + + ++ D R+K +SRDRDR +R
Sbjct: 123 DHFGGKLXXGYMQIREKLAELQEERNKSRKTDRLDDRRSKERSRDRDRESSRDRELGDSR 302
Query: 484 DKDHDYHRSERSHSREYD 501
++ D+ R R H R YD
Sbjct: 303 ERGRDHDRRSRDHDRHYD 356
>BI700844 similar to SP|Q42404|RU17_ U1 small nuclear ribonucleoprotein 70
kDa (U1 snRNP 70 kDa) (snRNP70) (U1-70K). [Mouse-ear
cress], partial (14%)
Length = 421
Score = 94.4 bits (233), Expect = 1e-19
Identities = 45/56 (80%), Positives = 50/56 (88%)
Frame = +3
Query: 253 SRSEEPRVREERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHH 308
SRSEEPRVRE+RHADRDRE SRERG+D+DRERERSRE S ++ RDRD HREDRHH
Sbjct: 258 SRSEEPRVREDRHADRDREISRERGRDKDRERERSREHSHERVRDRD--HREDRHH 419
Score = 61.2 bits (147), Expect = 1e-09
Identities = 29/35 (82%), Positives = 32/35 (90%)
Frame = +2
Query: 3 DPLLRNQNAAVQARTKAQNRANVLQLKLIGQSHPT 37
D +RNQNAAVQA +KAQNR+NVLQLKLIGQSHPT
Sbjct: 152 DAFMRNQNAAVQASSKAQNRSNVLQLKLIGQSHPT 256
Score = 53.9 bits (128), Expect = 2e-07
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = +3
Query: 289 ERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDR 347
+R + ++R + REDRH DRDR R+RG+++DRER+R R+ R RDR DR
Sbjct: 240 DRVTQQSRSEEPRVREDRH-ADRDREISRERGRDKDRERERSREHSHERVRDRDHREDR 413
Score = 46.6 bits (109), Expect = 3e-05
Identities = 23/55 (41%), Positives = 33/55 (59%)
Frame = +3
Query: 312 DRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKD 366
DR + R +E DR DR+R R+RGR++DR+RER E H+R R++D
Sbjct: 240 DRVTQQSRSEEPRVREDRHADRDREISRERGRDKDRERERSREH--SHERVRDRD 398
Score = 45.4 bits (106), Expect = 6e-05
Identities = 22/54 (40%), Positives = 30/54 (54%)
Frame = +3
Query: 316 DRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKDY 369
DR + R E DR RDR+ RER RD++R+ ER EH R +D+D+
Sbjct: 240 DRVTQQSRSEEPRVREDRHADRDREISRERGRDKDRERERSREHSHERVRDRDH 401
Score = 38.1 bits (87), Expect = 0.009
Identities = 23/60 (38%), Positives = 30/60 (49%)
Frame = +3
Query: 334 ERGRDRDRGRERDRDRERDHERDVEHDRYREKDKDYEVGETDRGRSHDRGADYDHVESKH 393
+R + R E +R +RD E R R +DKD E E R SH+R D DH E +H
Sbjct: 240 DRVTQQSRSEEPRVREDRHADRDREISRERGRDKDRE-RERSREHSHERVRDRDHREDRH 416
Score = 33.5 bits (75), Expect = 0.23
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 344 ERDRDRERDHERDVEHDRYREKDKDYEVGETDRGRSHDRGADYDHVESKHEKEPHGEI-E 402
+R + R E V DR+ ++D++ S +RG D D + + H + +
Sbjct: 240 DRVTQQSRSEEPRVREDRHADRDREI---------SRERGRDKDRERERSREHSHERVRD 392
Query: 403 RDYEPDDHH 411
RD+ D HH
Sbjct: 393 RDHREDRHH 419
>TC231263
Length = 595
Score = 91.7 bits (226), Expect = 7e-19
Identities = 43/76 (56%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = +3
Query: 428 HDPDHYNHYEHQRGRGQYDEGDDRGD-YNQYPDHAKMEDDHHTERAKSKSRDRDRNRDKD 486
HD +HY+ Y H GDDRGD YNQYPD +MEDD+H RA S+S +++R+ D D
Sbjct: 3 HDTEHYDPYNH---------GDDRGDHYNQYPDPDRMEDDYHAGRATSESHEKERSHDVD 155
Query: 487 HDYHRSERSHSREYDY 502
+Y RSERSHSREYDY
Sbjct: 156 REYRRSERSHSREYDY 203
>TC219167 similar to GB|AAA36308.1|386949|HUMMHRD5 MHC HLA-RD protein {Homo
sapiens;} , partial (11%)
Length = 600
Score = 89.7 bits (221), Expect = 3e-18
Identities = 53/134 (39%), Positives = 79/134 (58%), Gaps = 4/134 (2%)
Frame = +3
Query: 269 DREKSRERGKDRDRERERSRERSSDKARDRDRDH-REDRHHRDRDRNRDRDRGKERDRER 327
D+ K +R D + E + DH E R +RDRDR+R+RDRG+ERDR+R
Sbjct: 57 DKLKDSKRSDDESKGMSTEGEARDEPILKSKADHIGETRRNRDRDRDRERDRGRERDRDR 236
Query: 328 DRGRDRERGRDRDRGRERDRDRERDH-ERDVEHDR-YREKDKDYEVGETDRGRSHDRGAD 385
D RDR + RDRDRGR+ D++RER+ ERD DR +R +++ + G +++ + H +
Sbjct: 237 D--RDRTKSRDRDRGRDSDKEREREEAERDKLKDRGHRSRERAKDSGHSEKSKRH---SS 401
Query: 386 YDHVE-SKHEKEPH 398
+D V S EK+ H
Sbjct: 402 HDRVSYSSREKDRH 443
Score = 76.3 bits (186), Expect = 3e-14
Identities = 46/144 (31%), Positives = 73/144 (49%), Gaps = 1/144 (0%)
Frame = +3
Query: 238 VNQRHSGREQQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERERSRERSSDKARD 297
+++ + S E R+E + E ++RDR+R+R R+R ++ RD
Sbjct: 54 IDKLKDSKRSDDESKGMSTEGEARDEPILKSKADHIGETRRNRDRDRDRERDRGRERDRD 233
Query: 298 RDRDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDV 357
RD RDR ++RDRDRG++ D+ER+R + ER + +DRG R R+R +D
Sbjct: 234 RD---------RDRTKSRDRDRGRDSDKERER-EEAERDKLKDRG-HRSRERAKDSGHSE 380
Query: 358 EHDRYREKDK-DYEVGETDRGRSH 380
+ R+ D+ Y E DR R H
Sbjct: 381 KSKRHSSHDRVSYSSREKDRHRHH 452
Score = 72.8 bits (177), Expect = 3e-13
Identities = 46/142 (32%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
Frame = +3
Query: 259 RVREERHADRDREKSRERGKDRDRERERSR-ERSSDKARDRDRDHREDRHHRDRDRNRDR 317
++++ + +D + + G+ RD +S+ + + R+RDRD +R R R+R+RDR
Sbjct: 60 KLKDSKRSDDESKGMSTEGEARDEPILKSKADHIGETRRNRDRDRDRERD-RGRERDRDR 236
Query: 318 DRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKDYEVGE-TDR 376
DR + + R+RDRGRD ++ R+R+ ERD+ ++R H R RE+ KD E + R
Sbjct: 237 DRDRTKSRDRDRGRDSDKEREREEA-ERDKLKDRGH-------RSRERAKDSGHSEKSKR 392
Query: 377 GRSHDRGADYDHVESKHEKEPH 398
SHDR + + +H H
Sbjct: 393 HSSHDRVSYSSREKDRHRHH*H 458
Score = 60.1 bits (144), Expect = 2e-09
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Frame = +3
Query: 203 GRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGDEVNQRHSGREQQQSGPSRSEEPRVRE 262
G+ +V+V + + R G+ T DE + ++ +R +
Sbjct: 27 GKGAMVNVAIDKLKDSKRSDDESKGMSTEGEARDEPILKSKADHIGETRRNRDRDRDRER 206
Query: 263 ERHADRDREKSRERGKDRDRERERSRERSSDKARDR---DRDHREDRHHRDRDRNRDRDR 319
+R +RDR++ R+R K RDR+ R R SDK R+R +RD +DR HR R+R +D
Sbjct: 207 DRGRERDRDRDRDRTKSRDRD----RGRDSDKEREREEAERDKLKDRGHRSRERAKDSGH 374
Query: 320 GKERDRERDRGRDRERGRDRDRGR 343
++ R R R++DR R
Sbjct: 375 SEKSKRHSSHDRVSYSSREKDRHR 446
Score = 37.0 bits (84), Expect = 0.021
Identities = 24/71 (33%), Positives = 30/71 (41%)
Frame = +3
Query: 431 DHYNHYEHQRGRGQYDEGDDRGDYNQYPDHAKMEDDHHTERAKSKSRDRDRNRDKDHDYH 490
DH R R + D DRG E D +R ++KSRDRDR RD D +
Sbjct: 153 DHIGETRRNRDRDR-DRERDRG----------RERDRDRDRDRTKSRDRDRGRDSDKERE 299
Query: 491 RSERSHSREYD 501
R E + D
Sbjct: 300 REEAERDKLKD 332
Score = 32.3 bits (72), Expect = 0.51
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +3
Query: 442 RGQYDEGDDRGDYNQYPDHAKMEDDHHTERAKSKSRDRDRNRDKDHDYHRS---ERSHSR 498
+G EG+ R + K + DH E +++ RDRDR RD+ + R +R+ SR
Sbjct: 96 KGMSTEGEARDE-----PILKSKADHIGETRRNRDRDRDRERDRGRERDRDRDRDRTKSR 260
Query: 499 EYD 501
+ D
Sbjct: 261 DRD 269
>TC219166 similar to GB|AAA36308.1|386949|HUMMHRD5 MHC HLA-RD protein {Homo
sapiens;} , partial (12%)
Length = 774
Score = 85.1 bits (209), Expect = 7e-17
Identities = 53/155 (34%), Positives = 78/155 (50%), Gaps = 7/155 (4%)
Frame = +3
Query: 269 DREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDRERD 328
D+ K +R D + E + D + + R DR+RDR+R ++R+R+RD
Sbjct: 123 DKLKDSKRSDDESKGMITEGEARDEPILKSKADRKIEAIERRADRDRDRERYRDRERDRD 302
Query: 329 RGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKDYEVGETDRGRSHDRGADYDH 388
R RDR + RDRDRGR+ D++RER+ E +R + KD+D+ RS +R D H
Sbjct: 303 RDRDRTKSRDRDRGRDSDKERERE-----EAERGKLKDRDH--------RSRERAKDSGH 443
Query: 389 VE-----SKHEKEPHGEIERDYEPD--DHHGRYKE 416
E S H+++ HG E D HH Y E
Sbjct: 444 SEKSKRHSSHDRDSHGSSYSSREKDRHRHH*HYLE 548
Score = 75.1 bits (183), Expect = 7e-14
Identities = 38/106 (35%), Positives = 54/106 (50%)
Frame = +3
Query: 263 ERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKE 322
ER ADRDR++ R R ++RDR+R+R R +S D+ R RD D +R +R + +DRD
Sbjct: 240 ERRADRDRDRERYRDRERDRDRDRDRTKSRDRDRGRDSDKEREREEAERGKLKDRDH--- 410
Query: 323 RDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKD 368
R R R +D G R H+RD Y ++KD
Sbjct: 411 ----------RSRERAKDSGHSEKSKRHSSHDRDSHGSSYSSREKD 518
Score = 73.6 bits (179), Expect = 2e-13
Identities = 52/130 (40%), Positives = 73/130 (56%), Gaps = 5/130 (3%)
Frame = +3
Query: 256 EEPRVREERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNR 315
+EP ++ + ADR E + ER DRDR+RER R DR+RD D RDR ++R
Sbjct: 192 DEPILKSK--ADRKIE-AIERRADRDRDRERYR--------DRERDRDRD---RDRTKSR 329
Query: 316 DRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKD-----YE 370
DRDRG++ D+ER+R + ERG+ +DR R R+R +D + R+ D+D Y
Sbjct: 330 DRDRGRDSDKERER-EEAERGKLKDRD-HRSRERAKDSGHSEKSKRHSSHDRDSHGSSYS 503
Query: 371 VGETDRGRSH 380
E DR R H
Sbjct: 504 SREKDRHRHH 533
Score = 58.9 bits (141), Expect = 5e-09
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Frame = +3
Query: 254 RSEEPRVRE-----ERHADRDREKSRERGKDRDRERERSRER-SSDKARDRDRDHREDRH 307
R++ R RE ER DRDR++++ R +DR R+ ++ RER +++ + +DRDH
Sbjct: 246 RADRDRDRERYRDRERDRDRDRDRTKSRDRDRGRDSDKEREREEAERGKLKDRDH----- 410
Query: 308 HRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDH 353
R R R +D G +R DR+ RE+DR R H
Sbjct: 411 ---RSRERAKDSGHSEKSKRHSSHDRDSHGSSYSSREKDRHRHH*H 539
Score = 50.1 bits (118), Expect = 2e-06
Identities = 48/190 (25%), Positives = 67/190 (35%)
Frame = +3
Query: 293 DKARDRDRDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERD 352
DK +D R E + RD K + + +R RDRDR R RDR+R+RD
Sbjct: 123 DKLKDSKRSDDESKGMITEGEARDEPILKSKADRKIEAIERRADRDRDRERYRDRERDRD 302
Query: 353 HERDVEHDRYREKDKDYEVGETDRGRSHDRGADYDHVESKHEKEPHGEIERDYEPDDHHG 412
+RD R K +D DRGR D+ E + E+ G+++ DH
Sbjct: 303 RDRD------RTKSRD-----RDRGRDSDK-------EREREEAERGKLK----DRDHRS 416
Query: 413 RYKEPGHGHRHADPEHDPDHYNHYEHQRGRGQYDEGDDRGDYNQYPDHAKMEDDHHTERA 472
R + GH H H R D H
Sbjct: 417 RERAKDSGHSEKSKRHS-------SHDR-------------------------DSHGSSY 500
Query: 473 KSKSRDRDRN 482
S+ +DR R+
Sbjct: 501 SSREKDRHRH 530
Score = 39.7 bits (91), Expect = 0.003
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Frame = +3
Query: 232 RVGGDEVNQRHSGREQQQSGPSRSEEPRVREE-RHADRDREKS---RERGKDRDRERERS 287
R D +R+ RE+ + + R R+ R +D++RE+ R + KDRD RS
Sbjct: 246 RADRDRDRERYRDRERDRDRDRDRTKSRDRDRGRDSDKEREREEAERGKLKDRD---HRS 416
Query: 288 RERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDRER 327
RER+ D ++ R H DRD + +E+DR R
Sbjct: 417 RERAKDSGHS-EKSKRHSSH--DRDSHGSSYSSREKDRHR 527
Score = 35.8 bits (81), Expect = 0.046
Identities = 19/49 (38%), Positives = 25/49 (50%)
Frame = +3
Query: 453 DYNQYPDHAKMEDDHHTERAKSKSRDRDRNRDKDHDYHRSERSHSREYD 501
D +Y D E D +R ++KSRDRDR RD D + R E + D
Sbjct: 264 DRERYRDR---ERDRDRDRDRTKSRDRDRGRDSDKEREREEAERGKLKD 401
Score = 33.1 bits (74), Expect = 0.30
Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
Frame = +3
Query: 401 IERDYEPDDHHGRYKEPGHGHRHADPEHDPDHYNHYEHQRGRGQYDEGDDRGDYNQYPDH 460
IER + D RY++ R D + D D + RGR D+ + +
Sbjct: 237 IERRADRDRDRERYRD-----RERDRDRDRDRTKSRDRDRGRDS-----DKEREREEAER 386
Query: 461 AKMEDDHHT--ERAKSK--SRDRDRNRDKDHDYHRSERSHSREYD 501
K++D H ERAK S R+ D D H S S SRE D
Sbjct: 387 GKLKDRDHRSRERAKDSGHSEKSKRHSSHDRDSHGSSYS-SREKD 518
Score = 28.9 bits (63), Expect = 5.6
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +3
Query: 442 RGQYDEGDDRGD--YNQYPDHAKMEDDHHTERAKSKSRDRDRNRDKDHDYHRSERSHSRE 499
+G EG+ R + D + +R + + R RDR RD+D D +R+ SR+
Sbjct: 162 KGMITEGEARDEPILKSKADRKIEAIERRADRDRDRERYRDRERDRDRD---RDRTKSRD 332
Query: 500 YD 501
D
Sbjct: 333 RD 338
>TC205462 similar to GB|AAN28790.1|23505861|AY143851 At5g64200/MSJ1_4
{Arabidopsis thaliana;} , partial (54%)
Length = 1403
Score = 84.3 bits (207), Expect = 1e-16
Identities = 75/261 (28%), Positives = 109/261 (41%), Gaps = 6/261 (2%)
Frame = +3
Query: 127 PNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIEYLHT 186
P+IS D Y +L V +++ TT + F+ YG + + + D + + RG+AF+ Y +
Sbjct: 117 PDIS-DTY-SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYA 290
Query: 187 RDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGDEVNQRHSGRE 246
+ + A ++ DGR ++GR + V + G + H GR
Sbjct: 291 DEAQKAVERLDGRMVDGREITVQFAK---------------------YGPNAERIHKGRI 407
Query: 247 QQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERERSRERSSDK-ARDRDRDHRED 305
+ S SR R +RH R+ KDRD R RSR RS D+ RDR R +D
Sbjct: 408 IETSPRSRRSRSRSPRKRH--------RDDYKDRD-YRRRSRSRSYDRYERDRHRGRDKD 560
Query: 306 RHHRDRDRNRDRD-RGKERDRERDRGRDRERGRDRDRGRERDRD----RERDHERDVEHD 360
R R R+ D +G+ R R D R R R D G R R +R
Sbjct: 561 YRRRSRSRSASLDYKGRGRGRYDDERNSRSRSRSVDSGSPARRSPSPRRSPSPQRSTSPQ 740
Query: 361 RYREKDKDYEVGETDRGRSHD 381
R K GE+ RS D
Sbjct: 741 RSPSPRKSPR-GESPANRSRD 800
Score = 37.0 bits (84), Expect = 0.021
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 451 RGDYNQYPDHAKMEDDHHTERAKSKSR-DRDRNRDKDHDYHRSERSHSREYDY 502
R ++ D K D R++S R +RDR+R +D DY R RS S DY
Sbjct: 444 RSPRKRHRDDYKDRDYRRRSRSRSYDRYERDRHRGRDKDYRRRSRSRSASLDY 602
>TC221749 weakly similar to UP|Q16560 (Q16560) U1-snRNP binding protein
homolog, isoform a (U11/U12 snRNP 35K), partial (34%)
Length = 422
Score = 82.0 bits (201), Expect = 6e-16
Identities = 39/82 (47%), Positives = 51/82 (61%)
Frame = +3
Query: 112 AKAAEELEKYDPHNDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDAE 171
A+ + YDP DP +GDPY TLFVARLS TTE +++ YG +K +RLV D
Sbjct: 123 AQLCSSIGLYDPFGDPKATGDPYCTLFVARLSRLTTEDDLRKVMSKYGRVKNLRLVRDIV 302
Query: 172 SNKPRGYAFIEYLHTRDMKAAY 193
+ RGYAF+EY R+M+ AY
Sbjct: 303 TGASRGYAFVEYETEREMRRAY 368
>TC225188 similar to UP|Q9FYB7 (Q9FYB7) Splicing factor-like protein, partial
(62%)
Length = 1131
Score = 81.3 bits (199), Expect = 1e-15
Identities = 87/326 (26%), Positives = 120/326 (36%), Gaps = 4/326 (1%)
Frame = +1
Query: 137 LFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIEYLHTRDMKAAYKQA 196
L+V RLS T ++R F YG ++ V + D +AF+E+ RD A
Sbjct: 94 LYVGRLSSRTRSRDLERVFSRYGRVRGVDMKND--------FAFVEFSDPRDADDARYNL 249
Query: 197 DGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGDEVNQRHSGR--EQQQSGPSR 254
DGR +EG R++V+ +G P R G G G N G ++G +
Sbjct: 250 DGRDVEGSRIIVEFAKGG--PRGSRDREYMGRGPPPGSGRCFNCGIDGHWARDCKAGDWK 423
Query: 255 SEEPRVREERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRN 314
++ R E H +++ + S ++ R R RS RS R R R RDR+
Sbjct: 424 NKCYRCGERGHIEKNCKNSPKKLSQRGRRLSRSPVRS-----------RSPRRGRSRDRS 570
Query: 315 RDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKDYEVGET 374
RD R R R DR + RE + R+ D R K D G
Sbjct: 571 YSRDHSYSRSRSPVRRERSPVSEDRSQSREPSKIRKHSASPDQSSPR---KRGDTSPG-N 738
Query: 375 DRGRSHDRGADYDHVESKHEKEPHGEIERDYEP--DDHHGRYKEPGHGHRHADPEHDPDH 432
DR +H G+DY P G+ P D G Y P P P
Sbjct: 739 DRLATHQDGSDY-------SDGPRGKSRSPASPARDRDEGGYDSPKANGHSRSPSRSP-- 891
Query: 433 YNHYEHQRGRGQYDEGDDRGDYNQYP 458
R DE DD +Q P
Sbjct: 892 -----RDDDRSPIDEDDDNHRRSQSP 954
Score = 28.5 bits (62), Expect = 7.3
Identities = 43/183 (23%), Positives = 58/183 (31%), Gaps = 10/183 (5%)
Frame = +1
Query: 327 RDRGRDRERGRDRDRGRERDRDRERDHE-------RDVEHDRYREKDKDYEVGETDRGRS 379
R R RD ER R GR R D + D RD + RY +D E
Sbjct: 118 RTRSRDLERVFSR-YGRVRGVDMKNDFAFVEFSDPRDADDARYNLDGRDVEGSRI----- 279
Query: 380 HDRGADYDHVESKHEKEPHGEIERDYE---PDDHHGRYKEPGHGHRHADPEHDPDHYNHY 436
+ + P G +R+Y P GR G A D N
Sbjct: 280 ---------IVEFAKGGPRGSRDREYMGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKC 432
Query: 437 EHQRGRGQYDEGDDRGDYNQYPDHAKMEDDHHTERAKSKSRDRDRNRDKDHDYHRSERSH 496
RG ++ ++ R+ + R RDR+ +DH Y RS
Sbjct: 433 YRCGERGHIEKNCKNSPKKLSQRGRRLSRSPVRSRSPRRGRSRDRSYSRDHSYSRSRSPV 612
Query: 497 SRE 499
RE
Sbjct: 613 RRE 621
>TC205461 similar to GB|AAN28790.1|23505861|AY143851 At5g64200/MSJ1_4
{Arabidopsis thaliana;} , partial (69%)
Length = 1148
Score = 80.9 bits (198), Expect = 1e-15
Identities = 76/292 (26%), Positives = 115/292 (39%), Gaps = 2/292 (0%)
Frame = +3
Query: 127 PNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIEYLHT 186
P+IS D Y +L V +++ TT + F+ YG + + + D + + RG+AF+ Y +
Sbjct: 120 PDIS-DTY-SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYA 293
Query: 187 RDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGDEVNQRHSGRE 246
+ + A ++ DGR ++GR + V + G + H GR
Sbjct: 294 DEAQKAVERLDGRMVDGREITVQFAK---------------------YGPNAERIHKGRI 410
Query: 247 QQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERERSRERSSDK-ARDRDRDHRED 305
+ S SR R +RH D R DRD R RSR RS D+ RDR R +D
Sbjct: 411 IETSPRSRRSRSRSPRKRHRDDYR--------DRD-YRRRSRSRSYDRYERDRHRGRDKD 563
Query: 306 RHHRDRDRNRDRD-RGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYRE 364
R R R+ D +G+ R R D R R R D R R R R R
Sbjct: 564 YRRRSRSRSASLDYKGRGRGRYDDERNSRSRSRSVD-SRSPAR-RSPSPRRSPSPQRSTS 737
Query: 365 KDKDYEVGETDRGRSHDRGADYDHVESKHEKEPHGEIERDYEPDDHHGRYKE 416
+ ++ RG S + + + P G + P + E
Sbjct: 738 PQRSTSPRKSPRGESPANRSREERSPTPRSVSPRGRPDASRSPSPRNSNGDE 893
Score = 36.2 bits (82), Expect = 0.035
Identities = 23/67 (34%), Positives = 31/67 (45%), Gaps = 3/67 (4%)
Frame = +3
Query: 439 QRGRGQYDEGDDRGDYNQYPDHAKMEDDHHTERAKSKSRDR---DRNRDKDHDYHRSERS 495
+R R + R DY D + R++S+S DR DR+R +D DY R RS
Sbjct: 432 RRSRSRSPRKRHRDDYR---------DRDYRRRSRSRSYDRYERDRHRGRDKDYRRRSRS 584
Query: 496 HSREYDY 502
S DY
Sbjct: 585 RSASLDY 605
>BQ611667 similar to GP|29421114|dbj ADP-glucose pyrophosphorylase large
subunit PvAGPL1 {Phaseolus vulgaris}, partial (15%)
Length = 449
Score = 79.7 bits (195), Expect = 3e-15
Identities = 35/68 (51%), Positives = 55/68 (80%)
Frame = +2
Query: 309 RDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKD 368
R+R+R R+R+R +ER+RER+R R+RER R+R+R RER+R+RER+ ER+ E +R RE++++
Sbjct: 11 RERERERERERERERERERERERERERERERERERERERERERERERERERERERERERE 190
Query: 369 YEVGETDR 376
E ET +
Sbjct: 191 REQRETGK 214
Score = 77.4 bits (189), Expect = 1e-14
Identities = 34/73 (46%), Positives = 57/73 (77%)
Frame = +2
Query: 311 RDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKDYE 370
R+R R+R+R +ER+RER+R R+RER R+R+R RER+R+RER+ ER+ E +R RE++++ E
Sbjct: 11 RERERERERERERERERERERERERERERERERERERERERERERERERERERERERERE 190
Query: 371 VGETDRGRSHDRG 383
+ + G++ +G
Sbjct: 191 REQRETGKNWFQG 229
Score = 77.0 bits (188), Expect = 2e-14
Identities = 33/62 (53%), Positives = 52/62 (83%)
Frame = +3
Query: 309 RDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREKDKD 368
R+R+R R+R+R +ER+RER+R R+RER R+R+R RER+R+RER+ ER+ E +R RE++++
Sbjct: 9 RERERERERERERERERERERERERERERERERERERERERERERERERERERERERERE 188
Query: 369 YE 370
E
Sbjct: 189 RE 194
Score = 77.0 bits (188), Expect = 2e-14
Identities = 35/68 (51%), Positives = 51/68 (74%)
Frame = +3
Query: 303 REDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRY 362
RE R+R+R R+R+R +ER+RER+R R+RER R+R+R RER+R+RER+ ER+ E +R
Sbjct: 9 RERERERERERERERERERERERERERERERERERERERERERERERERERERERERERE 188
Query: 363 REKDKDYE 370
RE + E
Sbjct: 189 RENKEKLE 212
Score = 77.0 bits (188), Expect = 2e-14
Identities = 33/63 (52%), Positives = 52/63 (82%)
Frame = +1
Query: 306 RHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRYREK 365
R R+R+R R+R+R +ER+RER+R R+RER R+R+R RER+R+RER+ ER+ E +R RE+
Sbjct: 4 RAERERERERERERERERERERERERERERERERERERERERERERERERERERERERER 183
Query: 366 DKD 368
+++
Sbjct: 184 ERE 192
Score = 77.0 bits (188), Expect = 2e-14
Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 6/95 (6%)
Frame = +2
Query: 303 REDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEHDRY 362
RE R+R+R R+R+R +ER+RER+R R+RER R+R+R RER+R+RER+ ER+ E +R
Sbjct: 11 RERERERERERERERERERERERERERERERERERERERERERERERERERERERERERE 190
Query: 363 REK---DKDYEVGETDRGRSHD---RGADYDHVES 391
RE+ K++ G D R A + H+E+
Sbjct: 191 REQRETGKNWFQGTADAVRLFTWVFEDAKHTHIEN 295
Score = 76.6 bits (187), Expect = 2e-14
Identities = 39/94 (41%), Positives = 60/94 (63%)
Frame = +3
Query: 278 KDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRERGR 337
++R+RERER RER R+R+R R+R+R +ER+RER+R R+RER R
Sbjct: 9 RERERERERERERE-----------------RERERERERERERERERERERERERERER 137
Query: 338 DRDRGRERDRDRERDHERDVEHDRYREKDKDYEV 371
+R+R RER+R+RER+ ER+ + R K+ ++
Sbjct: 138 ERERERERERERERERERENKEKLERTGSKEQQM 239
Score = 76.6 bits (187), Expect = 2e-14
Identities = 35/66 (53%), Positives = 50/66 (75%)
Frame = +1
Query: 300 RDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDVEH 359
R RE R+R+R R+R+R +ER+RER+R R+RER R+R+R RER+R+RER+ ER+ E
Sbjct: 4 RAERERERERERERERERERERERERERERERERERERERERERERERERERERERERER 183
Query: 360 DRYREK 365
+R R K
Sbjct: 184 ERERTK 201
Score = 75.9 bits (185), Expect = 4e-14
Identities = 35/77 (45%), Positives = 58/77 (74%)
Frame = +1
Query: 281 DRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRD 340
+RERER RER ++ R+R+R+ R+R+R R+R+R +ER+RER+R R+RER R+R+
Sbjct: 10 ERERERERERERERERERERE-------RERERERERERERERERERERERERERERERE 168
Query: 341 RGRERDRDRERDHERDV 357
R RER+R+R + + +++
Sbjct: 169 RERERERERTKRNWKEL 219
Score = 75.1 bits (183), Expect = 7e-14
Identities = 34/72 (47%), Positives = 52/72 (72%)
Frame = +1
Query: 258 PRVREERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDR 317
PR ER +R+RE+ RER ++R+RERER RER ++ R+R+R+ R+R+R R+R
Sbjct: 1 PRAERERERERERERERERERERERERERERERERERERERERE-------RERERERER 159
Query: 318 DRGKERDRERDR 329
+R +ER+RER+R
Sbjct: 160 ERERERERERER 195
Score = 74.3 bits (181), Expect = 1e-13
Identities = 34/71 (47%), Positives = 51/71 (70%)
Frame = +1
Query: 298 RDRDHREDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDRGRERDRDRERDHERDV 357
R RE R+R+R R+R+R +ER+RER+R R+RER R+R+R RER+R+RER+ ER+
Sbjct: 4 RAERERERERERERERERERERERERERERERERERERERERERERERERERERERERER 183
Query: 358 EHDRYREKDKD 368
E +R + K+
Sbjct: 184 ERERTKRNWKE 216
Score = 73.9 bits (180), Expect = 2e-13
Identities = 37/83 (44%), Positives = 58/83 (69%)
Frame = +2
Query: 260 VREERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDR 319
V ER +R+RE+ RER ++R+RERER RER ++ R+R+R+ R+R+R R+R+R
Sbjct: 5 VPRERERERERERERERERERERERERERERERERERERERE-------RERERERERER 163
Query: 320 GKERDRERDRGRDRERGRDRDRG 342
+ER+RER+R RE G++ +G
Sbjct: 164 ERERERERER-EQRETGKNWFQG 229
Score = 72.8 bits (177), Expect = 3e-13
Identities = 36/92 (39%), Positives = 57/92 (61%)
Frame = +3
Query: 263 ERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKE 322
ER +R+RE+ RER ++R+RERER RER R+R+R R+R+R +E
Sbjct: 12 ERERERERERERERERERERERERERER-----------------ERERERERERERERE 140
Query: 323 RDRERDRGRDRERGRDRDRGRERDRDRERDHE 354
R+RER+R R+RER R+R+ + +R ++ +
Sbjct: 141 RERERERERERERERERENKEKLERTGSKEQQ 236
Score = 67.0 bits (162), Expect = 2e-11
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +1
Query: 254 RSEEPRVRE-ERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRD 312
R+E R RE ER +R+RE+ RER ++R+RERER RER +R+
Sbjct: 4 RAERERERERERERERERERERERERERERERERERER-------------------ERE 126
Query: 313 RNRDRDRGKERDRERDRGRDRER 335
R R+R+R +ER+RER+R R+RER
Sbjct: 127 RERERERERERERERERERERER 195
Score = 63.2 bits (152), Expect = 3e-10
Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +3
Query: 256 EEPRVRE-ERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRN 314
E R RE ER +R+RE+ RER ++R+RERER RER ++ R+R+R+ R+R+R
Sbjct: 18 ERERERERERERERERERERERERERERERERERERERERERERERE-------RERERE 176
Query: 315 RDRDRGKERDRERDRGRDRE 334
R+R+R + ER ++++
Sbjct: 177 RERERENKEKLERTGSKEQQ 236
Score = 60.8 bits (146), Expect = 1e-09
Identities = 28/70 (40%), Positives = 45/70 (64%)
Frame = +2
Query: 245 REQQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHRE 304
RE+++ E R RE R +R+RE+ RER ++R+RERER RER ++ R+R+R+
Sbjct: 11 RERERERERERERERERE-RERERERERERERERERERERERERERERERERERERERER 187
Query: 305 DRHHRDRDRN 314
+R R+ +N
Sbjct: 188 EREQRETGKN 217
Score = 59.7 bits (143), Expect = 3e-09
Identities = 29/65 (44%), Positives = 43/65 (65%), Gaps = 1/65 (1%)
Frame = +2
Query: 241 RHSGREQQQSGPSRSEEPRVRE-ERHADRDREKSRERGKDRDRERERSRERSSDKARDRD 299
R RE+++ E R RE ER +R+RE+ RER ++R+RERER RER ++ R+R+
Sbjct: 11 RERERERERERERERERERERERERERERERERERERERERERERERERERERERERERE 190
Query: 300 RDHRE 304
R+ RE
Sbjct: 191 REQRE 205
Score = 58.5 bits (140), Expect = 7e-09
Identities = 28/74 (37%), Positives = 44/74 (58%), Gaps = 5/74 (6%)
Frame = +2
Query: 252 PSRSEEPRVRE-----ERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDR 306
P E R RE ER +R+RE+ RER ++R+RERER RER ++ R+R+R+ +R
Sbjct: 8 PRERERERERERERERERERERERERERERERERERERERERERERERERERERERERER 187
Query: 307 HHRDRDRNRDRDRG 320
R+ ++ +G
Sbjct: 188 EREQRETGKNWFQG 229
Score = 58.2 bits (139), Expect = 9e-09
Identities = 29/78 (37%), Positives = 46/78 (58%)
Frame = +1
Query: 245 REQQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHRE 304
R +++ R E ER +R+RE+ RER ++R+RERER RER ++ R+R+R+
Sbjct: 4 RAERERERERERERERERERERERERERERERERERERERERERERERERERERERE--- 174
Query: 305 DRHHRDRDRNRDRDRGKE 322
R+R+R R + KE
Sbjct: 175 ----RERERERTKRNWKE 216
Score = 57.8 bits (138), Expect = 1e-08
Identities = 31/81 (38%), Positives = 48/81 (58%)
Frame = +3
Query: 243 SGREQQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERERSRERSSDKARDRDRDH 302
S RE+++ R E ER +R+RE+ RER ++R+RERER RER ++ R+R+R+
Sbjct: 3 SCRERERE---RERERERERERERERERERERERERERERERERERERERERERERERE- 170
Query: 303 REDRHHRDRDRNRDRDRGKER 323
RE R+ +R KE+
Sbjct: 171 RERERERENKEKLERTGSKEQ 233
Score = 53.5 bits (127), Expect = 2e-07
Identities = 26/62 (41%), Positives = 40/62 (63%), Gaps = 1/62 (1%)
Frame = +1
Query: 240 QRHSGREQQQSGPSRSEEPRVRE-ERHADRDREKSRERGKDRDRERERSRERSSDKARDR 298
+R RE+++ E R RE ER +R+RE+ RER ++R+RERER RER ++ R+R
Sbjct: 16 ERERERERERERERERERERERERERERERERERERERERERERERERERERERERERER 195
Query: 299 DR 300
+
Sbjct: 196 TK 201
Score = 53.1 bits (126), Expect = 3e-07
Identities = 28/66 (42%), Positives = 43/66 (64%), Gaps = 1/66 (1%)
Frame = +3
Query: 240 QRHSGREQQQSGPSRSEEPRVRE-ERHADRDREKSRERGKDRDRERERSRERSSDKARDR 298
+R RE+++ E R RE ER +R+RE+ RER ++R+RERER RER R+R
Sbjct: 18 ERERERERERERERERERERERERERERERERERERERERERERERERERERE----RER 185
Query: 299 DRDHRE 304
+R+++E
Sbjct: 186 ERENKE 203
Score = 50.1 bits (118), Expect = 2e-06
Identities = 25/66 (37%), Positives = 39/66 (58%), Gaps = 1/66 (1%)
Frame = +1
Query: 232 RVGGDEVNQRHSGREQQQSGPSRSEEPRVRE-ERHADRDREKSRERGKDRDRERERSRER 290
R + +R RE+++ E R RE ER +R+RE+ RER ++R+RERER RER
Sbjct: 4 RAERERERERERERERERERERERERERERERERERERERERERERERERERERERERER 183
Query: 291 SSDKAR 296
++ +
Sbjct: 184 ERERTK 201
Score = 49.7 bits (117), Expect = 3e-06
Identities = 27/68 (39%), Positives = 39/68 (56%), Gaps = 1/68 (1%)
Frame = +1
Query: 240 QRHSGREQQQSGPSRSEEPRVRE-ERHADRDREKSRERGKDRDRERERSRERSSDKARDR 298
+R RE+++ E R RE ER +R+RE+ RER ++R+RERER RER K +
Sbjct: 34 ERERERERERERERERERERERERERERERERERERERERERERERERERERERTKRNWK 213
Query: 299 DRDHREDR 306
+ R R
Sbjct: 214 ELVPRNSR 237
Score = 49.3 bits (116), Expect = 4e-06
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +3
Query: 240 QRHSGREQQQSGPSRSEEPRVRE-ERHADRDREKSRERGKDRDRERERSRERSSDKARDR 298
+R RE+++ E R RE ER +R+RE+ RER ++R+RERER RER +
Sbjct: 30 ERERERERERERERERERERERERERERERERERERERERERERERERERERERENKEKL 209
Query: 299 DR 300
+R
Sbjct: 210 ER 215
>TC209076 similar to UP|Q7Q9S9 (Q7Q9S9) EbiP3404 (Fragment), partial (4%)
Length = 941
Score = 78.6 bits (192), Expect = 6e-15
Identities = 50/132 (37%), Positives = 69/132 (51%), Gaps = 1/132 (0%)
Frame = +3
Query: 273 SRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDRERDRGRD 332
S ER DR++ R+ S +K D + E RH DR+ R+R R +ER +RDR RD
Sbjct: 36 SSERRYRDDRDQGYERDASREKDMGHDHEWSERRHRDDRETGRERSRDRERSLDRDRDRD 215
Query: 333 RERG-RDRDRGRERDRDRERDHERDVEHDRYREKDKDYEVGETDRGRSHDRGADYDHVES 391
RE+ R+RDR RE DRD DH R DR E D ++E G + R S R + + S
Sbjct: 216 REKDLRERDRHRE-DRDGYADHHR--FRDREAEHDDEWERGRSSRTHSKSRLSQEEEHHS 386
Query: 392 KHEKEPHGEIER 403
+ +G+ R
Sbjct: 387 RPRDADYGKRRR 422
Score = 74.7 bits (182), Expect = 9e-14
Identities = 44/123 (35%), Positives = 61/123 (48%), Gaps = 2/123 (1%)
Frame = +3
Query: 266 ADRDREKSRERGKDRDRERERSRERSSDKARDRDRDHREDRHHRDRDRNRDRDRGKERDR 325
++R R++G +RD RE+ + + R RD RE R RDR R DR ++RDR
Sbjct: 39 SERRYRDDRDQGYERDASREKDMGHDHEWSERRHRDDRETGRERSRDRERSLDRDRDRDR 218
Query: 326 ERD-RGRDRER-GRDRDRGRERDRDRERDHERDVEHDRYREKDKDYEVGETDRGRSHDRG 383
E+D R RDR R RD R RDRE +H+ + E R + + + S R
Sbjct: 219 EKDLRERDRHREDRDGYADHHRFRDREAEHDDEWERGRSSRTHSKSRLSQEEEHHSRPRD 398
Query: 384 ADY 386
ADY
Sbjct: 399 ADY 407
Score = 74.7 bits (182), Expect = 9e-14
Identities = 47/141 (33%), Positives = 78/141 (54%), Gaps = 1/141 (0%)
Frame = +3
Query: 283 ERERSRERSSDKARDRDRDHR-EDRHHRDRDRNRDRDRGKERDRERDRGRDRERGRDRDR 341
+R++ ER + + +D DH +R HRD DR R+R ++R+R DR RDR+R +D
Sbjct: 60 DRDQGYERDASREKDMGHDHEWSERRHRD-DRETGRERSRDRERSLDRDRDRDREKDL-- 230
Query: 342 GRERDRDRERDHERDVEHDRYREKDKDYEVGETDRGRSHDRGADYDHVESKHEKEPHGEI 401
RERDR RE D + +H R+R+++ +++ E +RGRS H +S+ +E
Sbjct: 231 -RERDRHRE-DRDGYADHHRFRDREAEHD-DEWERGRS-----SRTHSKSRLSQE----- 371
Query: 402 ERDYEPDDHHGRYKEPGHGHR 422
++HH R ++ +G R
Sbjct: 372 ------EEHHSRPRDADYGKR 416
Score = 69.3 bits (168), Expect = 4e-12
Identities = 44/119 (36%), Positives = 60/119 (49%), Gaps = 6/119 (5%)
Frame = +3
Query: 236 DEVNQRHSGREQQQSGPSRSEEPRVREERHADRDREKSRERGKDRDRERERSRERSSDKA 295
D+ +R + RE+ E R R++R R+R + RER DRDR+R+R ++
Sbjct: 66 DQGYERDASREKDMGHDHEWSERRHRDDRETGRERSRDRERSLDRDRDRDREKD-----L 230
Query: 296 RDRDRDHREDR-----HHRDRDRNRDRDRGKERDR-ERDRGRDRERGRDRDRGRERDRD 348
R+RDR HREDR HHR RDR + D ER R R + R + R RD D
Sbjct: 231 RERDR-HREDRDGYADHHRFRDREAEHDDEWERGRSSRTHSKSRLSQEEEHHSRPRDAD 404
Score = 44.7 bits (104), Expect = 1e-04
Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 7/108 (6%)
Frame = +3
Query: 398 HGEIERDYEPDDHHG------RYKEPGHGHRHADPEHDPDHYNHYEHQRGRGQ-YDEGDD 450
HG ER Y D G R K+ GH H ++ H D E R R + D D
Sbjct: 30 HGSSERRYRDDRDQGYERDASREKDMGHDHEWSERRHRDDRETGRERSRDRERSLDRDRD 209
Query: 451 RGDYNQYPDHAKMEDDHHTERAKSKSRDRDRNRDKDHDYHRSERSHSR 498
R + + +D + RDR+ D + + RS R+HS+
Sbjct: 210 RDREKDLRERDRHREDRDGYADHHRFRDREAEHDDEWERGRSSRTHSK 353
Score = 34.3 bits (77), Expect = 0.13
Identities = 21/66 (31%), Positives = 28/66 (41%), Gaps = 3/66 (4%)
Frame = +3
Query: 439 QRGRGQYDEGDDRG---DYNQYPDHAKMEDDHHTERAKSKSRDRDRNRDKDHDYHRSERS 495
+R R D+G +R + + DH E H +R + R RDR R D D R
Sbjct: 45 RRYRDDRDQGYERDASREKDMGHDHEWSERRHRDDRETGRERSRDRERSLDRDRDRDREK 224
Query: 496 HSREYD 501
RE D
Sbjct: 225 DLRERD 242
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.313 0.135 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,849,842
Number of Sequences: 63676
Number of extensions: 388364
Number of successful extensions: 35519
Number of sequences better than 10.0: 972
Number of HSP's better than 10.0 without gapping: 5293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24854
length of query: 502
length of database: 12,639,632
effective HSP length: 101
effective length of query: 401
effective length of database: 6,208,356
effective search space: 2489550756
effective search space used: 2489550756
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Medicago: description of AC148484.9