TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148483.13 + phase: 0 
         (63 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC225894 similar to UP|Q9FIQ0 (Q9FIQ0) Zinc finger protein Glo3-...   127  9e-31
TC225892 similar to UP|ARG3_HUMAN (Q9NP61) ADP-ribosylation fact...   127  9e-31
TC220307 similar to GB|AAM65362.1|21655301|AY103310 At2g37550/F1...    77  1e-15
TC217447 similar to GB|AAM65362.1|21655301|AY103310 At2g37550/F1...    77  2e-15
BE608407 similar to GP|4519792|dbj Asp1 {Arabidopsis thaliana}, ...    72  7e-14
BQ253424                                                               71  1e-13
TC225079 similar to UP|Q8L8M0 (Q8L8M0) ARF GAP-like zinc finger-...    70  2e-13
TC229990 similar to GB|AAP68261.1|31711810|BT008822 At4g21160 {A...    65  9e-12
TC227348 similar to UP|Q9SMX5 (Q9SMX5) GCN4-complementing protei...    61  1e-10
TC207362 similar to UP|Q9FIT8 (Q9FIT8) GCN4-complementing protei...    61  1e-10
BI315851                                                               51  1e-07
BF068241                                                               39  5e-04
BG405593 homologue to GP|10441354|gb| ARF GAP-like zinc finger-c...    37  0.002
BE556628                                                               36  0.003
BF009927                                                               28  0.94
BU578283 weakly similar to GP|16323057|gb| AT5g57660/MRI1_1 {Ara...    27  1.6
TC205912 weakly similar to UP|O24040 (O24040) LTCOR11, partial (...    25  7.9
CD401364 weakly similar to GP|13774348|gb histidine-containing p...    25  7.9
TC217759 similar to UP|Q6ZG80 (Q6ZG80) Zinc finger (C3HC4-type R...    25  7.9

>TC225894 similar to UP|Q9FIQ0 (Q9FIQ0) Zinc finger protein Glo3-like,
           partial (32%)
          Length = 612

 Score =  127 bits (320), Expect = 9e-31
 Identities = 59/63 (93%), Positives = 59/63 (93%)
 Frame = +1

Query: 1   MASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 60
           MASD FTDKN VFRKLK KSENK CFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS
Sbjct: 208 MASDGFTDKNTVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 387

Query: 61  FVR 63
           FVR
Sbjct: 388 FVR 396


>TC225892 similar to UP|ARG3_HUMAN (Q9NP61) ADP-ribosylation factor
           GTPase-activating protein 3 (ARF GAP 3), partial (12%)
          Length = 1727

 Score =  127 bits (320), Expect = 9e-31
 Identities = 59/63 (93%), Positives = 59/63 (93%)
 Frame = +2

Query: 1   MASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 60
           MASD FTDKN VFRKLK KSENK CFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS
Sbjct: 209 MASDGFTDKNTVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 388

Query: 61  FVR 63
           FVR
Sbjct: 389 FVR 397


>TC220307 similar to GB|AAM65362.1|21655301|AY103310 At2g37550/F13M22.5
           {Arabidopsis thaliana;} , partial (28%)
          Length = 602

 Score = 77.4 bits (189), Expect = 1e-15
 Identities = 31/50 (62%), Positives = 41/50 (82%)
 Frame = +2

Query: 14  RKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVR 63
           R L++++ NK C DC+ KNP WASV+YG+F+C++CS  HR LGVHISFVR
Sbjct: 170 RDLQSEAGNKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVR 319


>TC217447 similar to GB|AAM65362.1|21655301|AY103310 At2g37550/F13M22.5
           {Arabidopsis thaliana;} , partial (35%)
          Length = 563

 Score = 77.0 bits (188), Expect = 2e-15
 Identities = 31/50 (62%), Positives = 40/50 (80%)
 Frame = +3

Query: 14  RKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVR 63
           R L+++  NK C DC+ KNP WASV+YG+F+C++CS  HR LGVHISFVR
Sbjct: 60  RDLQSQPANKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVR 209


>BE608407 similar to GP|4519792|dbj Asp1 {Arabidopsis thaliana}, partial
          (26%)
          Length = 421

 Score = 71.6 bits (174), Expect = 7e-14
 Identities = 29/50 (58%), Positives = 38/50 (76%)
 Frame = +2

Query: 14 RKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVR 63
          R L+++  NK C DC+ KNP WASV+YG+F+C++CS  HR L VHI FVR
Sbjct: 20 RDLQSQPANKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLCVHICFVR 169


>BQ253424 
          Length = 277

 Score = 70.9 bits (172), Expect = 1e-13
 Identities = 30/43 (69%), Positives = 33/43 (75%)
 Frame = +2

Query: 21  ENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVR 63
           ENK C DC AK P WASV  GIF+C+ CS +HRSLGVHIS VR
Sbjct: 128 ENKECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVR 256


>TC225079 similar to UP|Q8L8M0 (Q8L8M0) ARF GAP-like zinc finger-containing
           protein ZIGA3, partial (48%)
          Length = 1845

 Score = 70.1 bits (170), Expect = 2e-13
 Identities = 35/73 (47%), Positives = 42/73 (56%), Gaps = 11/73 (15%)
 Frame = +3

Query: 2   ASDSFTDKNAVFRKLKTKS-----------ENKSCFDCNAKNPTWASVTYGIFLCIDCSA 50
           AS +   K  V ++L  K            EN+ C DC AK P WASV  GIF+C+ CS 
Sbjct: 123 ASSTMNSKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSG 302

Query: 51  VHRSLGVHISFVR 63
           +HRSLGVHIS VR
Sbjct: 303 IHRSLGVHISKVR 341


>TC229990 similar to GB|AAP68261.1|31711810|BT008822 At4g21160 {Arabidopsis
           thaliana;} , partial (22%)
          Length = 444

 Score = 64.7 bits (156), Expect = 9e-12
 Identities = 29/52 (55%), Positives = 36/52 (68%), Gaps = 3/52 (5%)
 Frame = +3

Query: 14  RKLKT---KSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFV 62
           RKLK    +S+N+ C DCNA +P WAS   G+F+C+ C  VHRSLG HIS V
Sbjct: 207 RKLKDLLLQSDNRLCADCNAPDPKWASANIGVFICLKCCGVHRSLGTHISKV 362


>TC227348 similar to UP|Q9SMX5 (Q9SMX5) GCN4-complementing protein (GCP1),
           partial (29%)
          Length = 1197

 Score = 61.2 bits (147), Expect = 1e-10
 Identities = 25/42 (59%), Positives = 31/42 (73%)
 Frame = +3

Query: 22  NKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVR 63
           N  C +C+A  P WAS+  GI LCI+CS VHR+LGVH+S VR
Sbjct: 594 NDKCAECSAPEPDWASLNLGILLCIECSGVHRNLGVHVSKVR 719


>TC207362 similar to UP|Q9FIT8 (Q9FIT8) GCN4-complementing protein homolog,
           partial (51%)
          Length = 1959

 Score = 61.2 bits (147), Expect = 1e-10
 Identities = 25/42 (59%), Positives = 30/42 (70%)
 Frame = +1

Query: 22  NKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVR 63
           N  C DC A  P WAS+  G+ +CI+CS VHR+LGVHIS VR
Sbjct: 793 NDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVR 918


>BI315851 
          Length = 385

 Score = 51.2 bits (121), Expect = 1e-07
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = +1

Query: 21  ENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHR 53
           EN+ C DC  K P WASV  GIF+C+ CS +HR
Sbjct: 286 ENRECADCRNKAPRWASVNLGIFICMQCSGIHR 384


>BF068241 
          Length = 387

 Score = 38.9 bits (89), Expect = 5e-04
 Identities = 20/50 (40%), Positives = 26/50 (52%)
 Frame = +2

Query: 13  FRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFV 62
           F+ +K    N +C  C        S   G+F+C+ C  VHRSLG HIS V
Sbjct: 134 FKLVKE*LPNGTCKTC------LKSANIGVFICLKCCGVHRSLGTHISKV 265


>BG405593 homologue to GP|10441354|gb| ARF GAP-like zinc finger-containing
           protein ZiGA4 {Arabidopsis thaliana}, partial (8%)
          Length = 385

 Score = 37.0 bits (84), Expect = 0.002
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 12  VFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVH 52
           + R L     N+ C +CN+  P +   ++  F+C+ CS +H
Sbjct: 262 IIRGLMKLPPNRRCINCNSLGPQYVCTSFWTFICMTCSGIH 384


>BE556628 
          Length = 112

 Score = 36.2 bits (82), Expect = 0.003
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +2

Query: 22 NKSCFDCNAKNPTWASVTYGIFLCID 47
          N  C +C+A +P W+S+  GI LCID
Sbjct: 35 NDKCAECSAPDPYWSSLNLGILLCID 112


>BF009927 
          Length = 228

 Score = 28.1 bits (61), Expect = 0.94
 Identities = 11/17 (64%), Positives = 14/17 (81%)
 Frame = +1

Query: 1   MASDSFTDKNAVFRKLK 17
           M S+ FT+KN +FRKLK
Sbjct: 178 MTSNGFTNKNTIFRKLK 228


>BU578283 weakly similar to GP|16323057|gb| AT5g57660/MRI1_1 {Arabidopsis
           thaliana}, partial (11%)
          Length = 409

 Score = 27.3 bits (59), Expect = 1.6
 Identities = 15/39 (38%), Positives = 18/39 (45%), Gaps = 1/39 (2%)
 Frame = +1

Query: 15  KLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDC-SAVH 52
           +LKTK   K C  C A  P         +LC+ C S VH
Sbjct: 202 ELKTKEMEKVCEFCTALRPLVYCKADAAYLCLSCDSKVH 318


>TC205912 weakly similar to UP|O24040 (O24040) LTCOR11, partial (61%)
          Length = 957

 Score = 25.0 bits (53), Expect = 7.9
 Identities = 13/31 (41%), Positives = 17/31 (53%)
 Frame = -3

Query: 17  KTKSENKSCFDCNAKNPTWASVTYGIFLCID 47
           K  SEN SC   N K P W ++ + I LC +
Sbjct: 280 KRNSENISC---NMKLPKWPNLWHFIGLCFE 197


>CD401364 weakly similar to GP|13774348|gb histidine-containing
           phosphotransfer protein {Catharanthus roseus}, partial
           (74%)
          Length = 608

 Score = 25.0 bits (53), Expect = 7.9
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -2

Query: 20  SENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISF 61
           ++NKSC  C   NPT  S+ Y   LC+    V + + + +SF
Sbjct: 208 TQNKSCPICKQNNPT--SILY-FSLCV*FCPVDQVVKLDLSF 92


>TC217759 similar to UP|Q6ZG80 (Q6ZG80) Zinc finger (C3HC4-type RING
          finger) protein-like, partial (72%)
          Length = 1362

 Score = 25.0 bits (53), Expect = 7.9
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +1

Query: 18 TKSENKSCFDCNAKNPTWASVTY--GIFLCIDCSAV 51
          T+ ++KS FDC+ ++     +TY  G FL +  S V
Sbjct: 1  TRMKSKSGFDCSCRSLYLVLITYY*GFFLLLKWSLV 108


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.324    0.132    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,423,133
Number of Sequences: 63676
Number of extensions: 43266
Number of successful extensions: 325
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 325
length of query: 63
length of database: 12,639,632
effective HSP length: 39
effective length of query: 24
effective length of database: 10,156,268
effective search space: 243750432
effective search space used: 243750432
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 52 (24.6 bits)