TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148405.1 + phase: 0 
         (149 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BE807325                                                              112  5e-26
TC210240 weakly similar to GB|AAT41846.1|48310596|BT014863 At3g0...    57  4e-09
AI444068                                                               28  1.6
AW433073                                                               27  4.7
TC219795                                                               27  4.7
TC219381                                                               26  8.0
BU084578                                                               26  8.0
TC208607 similar to UP|Q7XIW7 (Q7XIW7) Myosin heavy chain-like, ...    26  8.0
AI443086 homologue to GP|21536945|gb| seven in absentia-like pro...    26  8.0

>BE807325 
          Length = 456

 Score =  112 bits (281), Expect = 5e-26
 Identities = 51/69 (73%), Positives = 58/69 (83%), Gaps = 1/69 (1%)
 Frame = +3

Query: 77  PEKISWPLVWGQFCLCYEGQKLVTETDYLRDYGIKDGDQLRFIRHVSNVCNFQRK-PKKR 135
           P KI WPLVW QFCLCY+GQKLV+E DY+RDYGIKDGDQL F+ HVS+ C+F+RK  KKR
Sbjct: 27  PGKILWPLVWRQFCLCYQGQKLVSEMDYIRDYGIKDGDQLHFVYHVSDTCSFERKQSKKR 206

Query: 136 TVNLKQHGR 144
            VNLKQH R
Sbjct: 207 VVNLKQHMR 233


>TC210240 weakly similar to GB|AAT41846.1|48310596|BT014863 At3g07860
           {Arabidopsis thaliana;} , partial (91%)
          Length = 820

 Score = 56.6 bits (135), Expect = 4e-09
 Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
 Frame = +3

Query: 40  LTLTVLKLDSSSFQVEVAKTATVAVLKQAVEAAFRHKPEK------ISWPLVWGQFCLCY 93
           + ++VLKLD ++  V V  +ATV  LK A++       +       ISW  VW  +CL  
Sbjct: 285 MRISVLKLDGTTLDVIVMNSATVKDLKLAIKKKVNDMEQSSMGHRHISWKHVWANYCLSC 464

Query: 94  EGQKLVTETDYLRDYGIKDGDQLRFIRHVSNVCNFQRKPKKRTVNLKQHG 143
               L+ + + LR++G+++  Q+RF+ +V  +    R+  KR  +   HG
Sbjct: 465 HNN*LLDDNEALRNFGVRNNSQVRFVSYV--MTKESRRHSKRRKHRFFHG 608


>AI444068 
          Length = 321

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
 Frame = +3

Query: 8   SNESPRRSLSIQLSSMIIVDCTLP-----YDKLPSQNLTLTV 44
           + +SPRRS +   SS+ I+D         YD+LPSQ L LTV
Sbjct: 201 NTKSPRRSSTS--SSLAIIDGIFARKSFFYDRLPSQPLRLTV 320


>AW433073 
          Length = 431

 Score = 26.6 bits (57), Expect = 4.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 91  LCYEGQKLVTETDYLRDYGIKDGDQLRFIRHVS 123
           LC++G+  VT   +  +  I DGD LR +   S
Sbjct: 223 LCFDGENPVTAAIFSSELIISDGDSLREVTRSS 125


>TC219795 
          Length = 695

 Score = 26.6 bits (57), Expect = 4.7
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = -2

Query: 56  VAKTATVAVLKQAVEAAFRHKPEKISWPLVWGQFCLCYEGQKLVTETDYLRDYGI 110
           +A    + +L QA+  A  +K  K SW  + G   +    QKL    +++ DY I
Sbjct: 679 IANAKFLHLLAQALTTAS*NKELKFSWQ*LTGDKLMSTRTQKLHYAIEFIMDYHI 515


>TC219381 
          Length = 1169

 Score = 25.8 bits (55), Expect = 8.0
 Identities = 14/37 (37%), Positives = 20/37 (53%)
 Frame = -1

Query: 18   IQLSSMIIVDCTLPYDKLPSQNLTLTVLKLDSSSFQV 54
            IQ S   +++  LP + LPS NLT   L L   S ++
Sbjct: 1085 IQHSGSSLINFLLPSEPLPSSNLTPASLCLQLGSCEI 975


>BU084578 
          Length = 420

 Score = 25.8 bits (55), Expect = 8.0
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -1

Query: 127 NFQRKPKKRTV-NLKQHGRYEFS 148
           N Q++ KKR + N+K HG Y FS
Sbjct: 375 NTQKRTKKRHIKNIKSHGGYLFS 307


>TC208607 similar to UP|Q7XIW7 (Q7XIW7) Myosin heavy chain-like, partial (8%)
          Length = 1625

 Score = 25.8 bits (55), Expect = 8.0
 Identities = 13/42 (30%), Positives = 25/42 (58%)
 Frame = +3

Query: 31  PYDKLPSQNLTLTVLKLDSSSFQVEVAKTATVAVLKQAVEAA 72
           P  ++P ++   T+ K+  S FQ++  K + + +LK+  EAA
Sbjct: 714 PKAQIPKES---TLKKVIDSKFQIDETKISKLTILKKLEEAA 830


>AI443086 homologue to GP|21536945|gb| seven in absentia-like protein
           {Arabidopsis thaliana}, partial (13%)
          Length = 322

 Score = 25.8 bits (55), Expect = 8.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 80  ISWPLVWGQFCLCYEGQKL 98
           +S+PL W  FCL +E  +L
Sbjct: 263 VSFPLFWSDFCLHFEAFQL 319


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.320    0.133    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,675,297
Number of Sequences: 63676
Number of extensions: 84280
Number of successful extensions: 559
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of query: 149
length of database: 12,639,632
effective HSP length: 89
effective length of query: 60
effective length of database: 6,972,468
effective search space: 418348080
effective search space used: 418348080
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)