BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148398.1 + phase: 2 /pseudo/partial
(2332 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC232188 223 1e-57
AW705376 similar to GP|9800258|gb|A pR34 {rat cytomegalovirus Ma... 141 3e-33
AW397677 76 1e-29
TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {A... 62 3e-09
TC207027 weakly similar to UP|Q9LW95 (Q9LW95) KED, partial (17%) 54 1e-06
TC232681 weakly similar to GB|AAP21377.1|30102918|BT006569 At1g4... 50 1e-05
TC203361 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%) 46 2e-04
TC208880 similar to GB|AAM65705.1|21593738|AY088161 WRKY transcr... 44 6e-04
TC211437 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%) 44 8e-04
TC219641 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 44 0.001
TC230133 weakly similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 44 0.001
TC203787 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 43 0.001
TC230134 weakly similar to UP|NUCL_HUMAN (P19338) Nucleolin (Pro... 43 0.002
TC208879 similar to GB|AAM65705.1|21593738|AY088161 WRKY transcr... 42 0.004
CF922292 42 0.004
TC215822 similar to UP|Q9LW00 (Q9LW00) Arabidopsis thaliana geno... 42 0.004
TC217786 weakly similar to UP|Q6V9I6 (Q6V9I6) Histone deacetylas... 41 0.007
AW472204 40 0.009
TC210126 similar to UP|NUCL_HUMAN (P19338) Nucleolin (Protein C2... 40 0.009
TC217235 similar to UP|Q9LW88 (Q9LW88) Arabidopsis thaliana geno... 40 0.015
>TC232188
Length = 709
Score = 223 bits (567), Expect = 1e-57
Identities = 121/171 (70%), Positives = 131/171 (75%), Gaps = 8/171 (4%)
Frame = +3
Query: 2152 SNLTFKQENTIADEPVVDLLKFLTNKLDAAVVKARLPSGHNPLQQLVLIIADGRFHEKDN 2211
+NLTFKQENTIADEPVVDLLK+LTNKLD AV KARLPSGHNPLQQLVLIIADGRF EK
Sbjct: 6 ANLTFKQENTIADEPVVDLLKYLTNKLDTAVAKARLPSGHNPLQQLVLIIADGRFVEKKK 185
Query: 2212 LKRCVREALASNRMVAFLLLDNSQESIMDLMEASFEGGKMKFSKYMDSFPFPYYIVLRNI 2271
LK+CV + NRMVAFLLLDNSQESIMDL EAS EGG+ K KYMDSFPFPYYIVLRNI
Sbjct: 186 LKQCVIDVSTGNRMVAFLLLDNSQESIMDLKEASVEGGQTKIFKYMDSFPFPYYIVLRNI 365
Query: 2272 EALPRTLANLLRQ--------TETGKLEFFFLYPRQKKKWKINSITKIMLC 2314
EALPRTLANLLRQ T G L F + R+ + I + I+ C
Sbjct: 366 EALPRTLANLLRQWMELMRHSTG*GLLSCKFHFGRESAPYFIYIVDPIVQC 518
>AW705376 similar to GP|9800258|gb|A pR34 {rat cytomegalovirus Maastricht} [Rat
cytomegalovirus Maastricht], partial (2%)
Length = 429
Score = 141 bits (356), Expect = 3e-33
Identities = 65/87 (74%), Positives = 79/87 (90%)
Frame = +3
Query: 1448 QKKEEQEESKEVPGNDNTGIEMDQDFQADAVSLSEDSSENEDCDGENEELESEMGPTGPD 1507
Q+ E+Q++S EVP ++NTGIEM+QDF+ADA+SLSEDS E++D DGENEELESEMGP GPD
Sbjct: 168 QQNEKQDDSNEVPSSNNTGIEMEQDFEADAMSLSEDSGEDDDIDGENEELESEMGPAGPD 347
Query: 1508 SEAVGEKIWDQNEDETPDDTGEKYESG 1534
SEAVGEK+ D+NEDETP+DT EKYESG
Sbjct: 348 SEAVGEKVCDENEDETPNDTREKYESG 428
Score = 77.8 bits (190), Expect = 5e-14
Identities = 41/66 (62%), Positives = 49/66 (74%)
Frame = +1
Query: 1383 LYFQKVLED*QKTRRMMEPLINLKMQVGLAWGKVLD*MMSVIR*LMKISCWEHVNRYVNC 1442
LYFQKVLE KTRR MEP I+L+MQVG AW +V D* M VIR LMKISCWEH N +
Sbjct: 4 LYFQKVLEYLLKTRRKMEPSIHLEMQVGQAWERVSD*RM*VIRLLMKISCWEHGNSKMKS 183
Query: 1443 LLSMMQ 1448
+++M+
Sbjct: 184 KMTLMK 201
Score = 30.8 bits (68), Expect = 7.2
Identities = 30/132 (22%), Positives = 55/132 (40%), Gaps = 14/132 (10%)
Frame = +3
Query: 1508 SEAVGEKIWDQNEDETPDDTGEKYESG-----------PSVKDGD---GSNKELRAKDDS 1553
S+ G +Q ED T + +G+ +G + D D G+ ++ K D
Sbjct: 12 SKGFGISPENQEEDGTLNTSGDASGTGMGEGVGLKDVSDQITDEDQLLGAREQQNEKQDD 191
Query: 1554 TSDQSGDDSCDEGDAQNDEAAAQNEFDDEENGDDVNMDKEAAHSDATGLKPDEPDHSSDM 1613
+++ ++ Q+ EA A + +D DD++ + E S+ + P PD +
Sbjct: 192 SNEVPSSNNTGIEMEQDFEADAMSLSEDSGEDDDIDGENEELESE---MGPAGPDSEAVG 362
Query: 1614 EIDLNANEDVDP 1625
E + NED P
Sbjct: 363 EKVCDENEDETP 398
>AW397677
Length = 454
Score = 75.9 bits (185), Expect(2) = 1e-29
Identities = 37/53 (69%), Positives = 46/53 (85%)
Frame = +1
Query: 267 INRLTDEYTAYNDIIQPIQVAVYEMKFGLSLVLSSFLEKEYLRKVGHENINLV 319
I++L DEY AY+DIIQPIQVAVYEMKFGLSLVLSS EK+ L ++G E+IN++
Sbjct: 1 IHQLMDEYAAYSDIIQPIQVAVYEMKFGLSLVLSSTWEKKCLNELGQEDINVI 159
Score = 74.7 bits (182), Expect(2) = 1e-29
Identities = 40/64 (62%), Positives = 52/64 (80%), Gaps = 2/64 (3%)
Frame = +3
Query: 321 DMIYILMRFPRAASWKFISVE-DVGVDLHSSYKLDFGTDFYL-NMGLIERLITLSSGVSA 378
+MIY LMRFPRAAS FISV+ D+G+D+ SY+LD T FYL ++ L+ RL+TLSSGV+A
Sbjct: 240 EMIYTLMRFPRAASCMFISVKHDIGLDMRPSYRLDSATGFYLVDVDLMVRLVTLSSGVAA 419
Query: 379 DKKV 382
D+KV
Sbjct: 420 DQKV 431
>TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;} , partial (46%)
Length = 902
Score = 62.0 bits (149), Expect = 3e-09
Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 1/199 (0%)
Frame = +2
Query: 1497 LESEMGPTGPDSEAVGEKIWDQNEDET-PDDTGEKYESGPSVKDGDGSNKELRAKDDSTS 1555
L+S+M T SE V ++NE + ++ E+YES V D D + E +DD
Sbjct: 209 LDSKMKATKELSEQV-----EENEVKVLVEEDDEEYESVDEVVD-DAEDDEDEEEDDD-- 364
Query: 1556 DQSGDDSCDEGDAQNDEAAAQNEFDDEENGDDVNMDKEAAHSDATGLKPDEPDHSSDMEI 1615
D GDD+ DE D D ++ DDEE GD G +PD+ D+ SD +
Sbjct: 365 DDEGDDNDDEEDDAPDGGDDDDDEDDEEEGD-----------VQRGGEPDDDDNDSDDDS 511
Query: 1616 DLNANEDVDPIEEGDQEGHDDSAENGNQEDETCPPDEIMEEAHTEVDVSSEKDDLGQEHQ 1675
D + +ED + EE +E D E + ET +E + E + E++D+ E
Sbjct: 512 DDDEDEDEEDEEEQGEE-EDLGTEYLIRPLETAEEEEASSDFEPEENGEEEEEDVDDEDC 688
Query: 1676 ENDDMNSMDPKNDTSESSD 1694
E + ++D +S D
Sbjct: 689 EKAEAPPKRKRSDKDDSDD 745
Score = 52.0 bits (123), Expect = 3e-06
Identities = 52/220 (23%), Positives = 98/220 (43%), Gaps = 18/220 (8%)
Frame = +2
Query: 1448 QKKEEQEESKEVPGNDNTGIEMDQDFQADAVSLSEDSSENED---CDGENEELESEMGPT 1504
+++E + + G N +D +A LSE ENE + ++EE ES +
Sbjct: 146 RREEAAQRISKSRGERNVLWFLDSKMKATK-ELSEQVEENEVKVLVEEDDEEYES-VDEV 319
Query: 1505 GPDSEAVGEKIWDQNEDETPDDTGEKYESGPSVKDGDGSNKELRAKDDSTSDQSGDDSCD 1564
D+E ++ D ++DE D+ E+ ++ D D + E + DD+
Sbjct: 320 VDDAEDDEDEEEDDDDDEGDDNDDEEDDAPDGGDDDDDEDDEEEGDVQRGGEPDDDDNDS 499
Query: 1565 EGDAQNDEAAAQNEFDDEENGDDVNMDKEAAHSDATGLKP----DEPDHSSDMEIDLNAN 1620
+ D+ +DE ++E D+EE G++ ++ E ++P +E + SSD E + N
Sbjct: 500 DDDSDDDED--EDEEDEEEQGEEEDLGTEYL------IRPLETAEEEEASSDFEPEENGE 655
Query: 1621 EDVDPIEEGDQE-----------GHDDSAENGNQEDETCP 1649
E+ + +++ D E DDS ++ ED+ P
Sbjct: 656 EEEEDVDDEDCEKAEAPPKRKRSDKDDSDDDDGGEDDERP 775
Score = 31.6 bits (70), Expect = 4.2
Identities = 27/108 (25%), Positives = 43/108 (39%)
Frame = -3
Query: 1685 PKNDTSESSDVVNPQVSNVDLASQSKSDLQTSGSENIASQSNLSNSHHDFGNPAVTGGFP 1744
PK+ +S S + S+ S S+S +SGS + + S+S +P
Sbjct: 573 PKSSSSPCSSSSSSSSSSSSSESSSESLSSSSGSPPRWTSPSSSSSSSSSSSPPSGASSS 394
Query: 1745 SSDMSEMDINMSDSSNTGGFSKTQPKSHLPQHEHSFSQEKQTNPSRST 1792
SS +S + S SS++ S + S + S S K ST
Sbjct: 393 SSSLSSPSSSSSSSSSSSSSSASSTTSSTDSYSSSSSSTKTLTSFSST 250
>TC207027 weakly similar to UP|Q9LW95 (Q9LW95) KED, partial (17%)
Length = 1005
Score = 53.5 bits (127), Expect = 1e-06
Identities = 60/261 (22%), Positives = 113/261 (42%), Gaps = 27/261 (10%)
Frame = +3
Query: 1448 QKKEEQEESKEVPGNDNTGIEMDQDFQADAVSLSEDSSENEDCDGENEELESEMGPTGPD 1507
+KKE+ ++ K+ N + G + D + V E+ E+++ E ++ E + D
Sbjct: 18 EKKEKDKKEKKKKENKDKGDKTD----VEKVKGKENDGEDDEEKKEKKKKEKKDKDGKTD 185
Query: 1508 SEAVGEKIWDQNEDETPDDTGEKYESGPSVK------DG-DGSNKELRAKDDSTSDQSGD 1560
+E + +K D +DE + +KY+ + K DG D NKE KD D G+
Sbjct: 186 AEKIKKKEDDGKDDEEKKEKKKKYDKIDAXKVKGKEDDGKDEGNKE--KKDKEKGDGDGE 359
Query: 1561 DSCDEGDAQND----------------EAAAQNEFDDEENGDDVNMDKEAAHSDATGLKP 1604
+ ++ D + + E +E +D+E DK+ D K
Sbjct: 360 EKKEKKDKEKEKKKEKKDKDEETDTLKEKGKNDEGEDDEGNKKKKKDKKEKEKDHKKEKK 539
Query: 1605 D-EPDHSSDMEIDLNANEDVDPIEEGDQEGH-DDSAENGNQE--DETCPPDEIMEEAHTE 1660
D E D +++++ D+D IEE +EG +D ++G +E ++ D+ +E +
Sbjct: 540 DKEEGEKEDSKVEVSV-RDID-IEEIKKEGEKEDKGKDGGKEVKEKKKKEDKDKKEKKKK 713
Query: 1661 VDVSSEKDDLGQEHQENDDMN 1681
V + DL Q+ + +N
Sbjct: 714 VTGKDKTKDLSTLKQKLEKIN 776
>TC232681 weakly similar to GB|AAP21377.1|30102918|BT006569 At1g47970
{Arabidopsis thaliana;} , partial (39%)
Length = 867
Score = 50.1 bits (118), Expect = 1e-05
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 7/138 (5%)
Frame = +1
Query: 1539 DGDGSNKELRAKDDSTSDQSGDDSCDEGDAQNDEAAAQNEFDDEENGDDVNMDKEAAHSD 1598
D D N++ D+ + GDD DE + + + E DD++N DD + D++ +
Sbjct: 211 DDDDDNEDEEDDDEDDAPDGGDDDDDEDEEEESDVQRGGEPDDDDNDDD-DEDEDEEDEE 387
Query: 1599 ATGLKPDEPDHSSDMEI-------DLNANEDVDPIEEGDQEGHDDSAENGNQEDETCPPD 1651
G +E D ++ I + A+ D +P E G++E D E+G ++ E P
Sbjct: 388 EQG---EEADLGTEYLIRPLVTAEEEEASSDFEPEENGEEEEEDVDDEDG-EKSEAPPKR 555
Query: 1652 EIMEEAHTEVDVSSEKDD 1669
+ ++ ++ D E DD
Sbjct: 556 KRSDKDDSDDDDGGEDDD 609
Score = 48.5 bits (114), Expect = 3e-05
Identities = 38/147 (25%), Positives = 60/147 (39%), Gaps = 11/147 (7%)
Frame = +1
Query: 1517 DQNEDETPDDTGEKYESGPSVKDGDGSNKELRAKDDSTSDQSGDDSCDEGDAQNDEAAAQ 1576
D NEDE DD + + G D D E D + DD D+ D DE
Sbjct: 220 DDNEDEEDDDEDDAPDGG----DDDDDEDEEEESDVQRGGEPDDDDNDDDDEDEDEE--- 378
Query: 1577 NEFDDEENGDDVNMDKEAAHSDATGLKPDEPDHSSDMEIDLNANEDVDPIEEGDQE---- 1632
D+EE G++ ++ E + +E + SSD E + N E+ + +++ D E
Sbjct: 379 ---DEEEQGEEADLGTEYLIRPL--VTAEEEEASSDFEPEENGEEEEEDVDDEDGEKSEA 543
Query: 1633 -------GHDDSAENGNQEDETCPPDE 1652
DDS ++ ED+ P +
Sbjct: 544 PPKRKRSDKDDSDDDDGGEDDDERPSK 624
Score = 43.9 bits (102), Expect = 8e-04
Identities = 34/131 (25%), Positives = 56/131 (41%), Gaps = 20/131 (15%)
Frame = +1
Query: 1451 EEQEESKEVPGNDNTGIEMDQDFQADAVSLSE--DSSENEDCDGENEELESEMGP----- 1503
EE ++ + P + + D++ ++D E D ++D + E+EE E E G
Sbjct: 235 EEDDDEDDAPDGGDDDDDEDEEEESDVQRGGEPDDDDNDDDDEDEDEEDEEEQGEEADLG 414
Query: 1504 ---------TGPDSEAVG----EKIWDQNEDETPDDTGEKYESGPSVKDGDGSNKELRAK 1550
T + EA E+ ++ E++ D+ GEK E+ P K D K
Sbjct: 415 TEYLIRPLVTAEEEEASSDFEPEENGEEEEEDVDDEDGEKSEAPPKRKRSD--------K 570
Query: 1551 DDSTSDQSGDD 1561
DDS D G+D
Sbjct: 571 DDSDDDDGGED 603
>TC203361 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%)
Length = 1090
Score = 46.2 bits (108), Expect = 2e-04
Identities = 37/145 (25%), Positives = 58/145 (39%), Gaps = 5/145 (3%)
Frame = -1
Query: 1448 QKKEEQEESKEVPGNDNTGIEMDQDFQADA-VSLSEDSSENEDCDG----ENEELESEMG 1502
+K + Q++ ++ G D E D D D E+ +ED G N + S+
Sbjct: 634 RKTQSQDKQRDAEGEDGNDDEGDDDDDGDGGFGEGEEELSSEDGGGYGNNSNNKSNSKKA 455
Query: 1503 PTGPDSEAVGEKIWDQNEDETPDDTGEKYESGPSVKDGDGSNKELRAKDDSTSDQSGDDS 1562
P G A E+ +++EDE DD DD D DD
Sbjct: 454 PEGGAGGA--EENGEEDEDEDGDD----------------------QDDDEDDDDDDDDE 347
Query: 1563 CDEGDAQNDEAAAQNEFDDEENGDD 1587
DEG + DE A++E ++E+ D+
Sbjct: 346 EDEGGEEEDEDGAEDEENEEDEEDE 272
Score = 42.0 bits (97), Expect = 0.003
Identities = 40/144 (27%), Positives = 64/144 (43%), Gaps = 11/144 (7%)
Frame = -1
Query: 1518 QNEDETPDDTGE--KYESGPSVKDGDGS----NKELRAKD-----DSTSDQSGDDSCDEG 1566
Q++D+ D GE + G DGDG +EL ++D ++++++S EG
Sbjct: 625 QSQDKQRDAEGEDGNDDEGDDDDDGDGGFGEGEEELSSEDGGGYGNNSNNKSNSKKAPEG 446
Query: 1567 DAQNDEAAAQNEFDDEENGDDVNMDKEAAHSDATGLKPDEPDHSSDMEIDLNANEDVDPI 1626
A E E D++E+GDD + D+ D+ D D E + ED D
Sbjct: 445 GAGGAEE--NGEEDEDEDGDDQDDDE------------DDDDDDDDEEDEGGEEEDEDGA 308
Query: 1627 EEGDQEGHDDSAENGNQEDETCPP 1650
E D+E +D E +E+ PP
Sbjct: 307 E--DEENEED--EEDEEEEALQPP 248
Score = 38.5 bits (88), Expect = 0.034
Identities = 28/128 (21%), Positives = 55/128 (42%)
Frame = -1
Query: 1485 SENEDCDGENEELESEMGPTGPDSEAVGEKIWDQNEDETPDDTGEKYESGPSVKDGDGSN 1544
S+++ D E E+ + G D + G+ + + E+E + G Y G + + S
Sbjct: 622 SQDKQRDAEGEDGNDDEG----DDDDDGDGGFGEGEEELSSEDGGGY--GNNSNNKSNSK 461
Query: 1545 KELRAKDDSTSDQSGDDSCDEGDAQNDEAAAQNEFDDEENGDDVNMDKEAAHSDATGLKP 1604
K + +D ++GD Q+D+ ++ DDEE+ D++ A + +
Sbjct: 460 KAPEGGAGGAEENGEEDEDEDGDDQDDDEDDDDDDDDEEDEGGEEEDEDGAEDEEN--EE 287
Query: 1605 DEPDHSSD 1612
DE D +
Sbjct: 286 DEEDEEEE 263
Score = 37.0 bits (84), Expect = 0.10
Identities = 34/143 (23%), Positives = 59/143 (40%), Gaps = 1/143 (0%)
Frame = -1
Query: 1557 QSGDDSCD-EGDAQNDEAAAQNEFDDEENGDDVNMDKEAAHSDATGLKPDEPDHSSDMEI 1615
QS D D EG+ ND+ E DD+++GD G E + SS+
Sbjct: 625 QSQDKQRDAEGEDGNDD-----EGDDDDDGDG-------------GFGEGEEELSSEDGG 500
Query: 1616 DLNANEDVDPIEEGDQEGHDDSAENGNQEDETCPPDEIMEEAHTEVDVSSEKDDLGQEHQ 1675
N + + EG AE +EDE D+ ++ + D E+D+ G+E
Sbjct: 499 GYGNNSNNKSNSKKAPEGGAGGAEENGEEDEDEDGDDQDDDEDDDDDDDDEEDEGGEEED 320
Query: 1676 ENDDMNSMDPKNDTSESSDVVNP 1698
E+ + + +++ E + + P
Sbjct: 319 EDGAEDEENEEDEEDEEEEALQP 251
>TC208880 similar to GB|AAM65705.1|21593738|AY088161 WRKY transcription factor
12 {Arabidopsis thaliana;} , partial (24%)
Length = 574
Score = 44.3 bits (103), Expect = 6e-04
Identities = 19/38 (50%), Positives = 30/38 (78%)
Frame = +3
Query: 1448 QKKEEQEESKEVPGNDNTGIEMDQDFQADAVSLSEDSS 1485
++ E++++S EVP ++ TGIE ++DF D +SLSEDSS
Sbjct: 231 KQNEKKDDSNEVPSSNYTGIETEKDF*VDTISLSEDSS 344
>TC211437 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%)
Length = 857
Score = 43.9 bits (102), Expect = 8e-04
Identities = 34/104 (32%), Positives = 49/104 (46%), Gaps = 6/104 (5%)
Frame = +1
Query: 1486 ENEDCDGENEELESEMGPTGPDSEAVGEKIWDQNEDETPDD---TGEKYESGPSVKD--- 1539
+N++ + E+EE E GPD EDE DD +GE+ + G +D
Sbjct: 349 QNKNSETEDEEDGDEDDEDGPD------------EDEDGDDEEFSGEEGDEGGDPEDEAN 492
Query: 1540 GDGSNKELRAKDDSTSDQSGDDSCDEGDAQNDEAAAQNEFDDEE 1583
G+GS DD D GDD+ DE D + E ++E +DEE
Sbjct: 493 GEGS-------DDGDEDDDGDDNGDEEDDDDGEDEEEDEEEDEE 603
Score = 39.3 bits (90), Expect = 0.020
Identities = 29/91 (31%), Positives = 42/91 (45%), Gaps = 7/91 (7%)
Frame = +1
Query: 1577 NEFDDEENGDDVNMDKEAAHSDATGLKPDEPDHSSDMEID-LNANEDVDPIEEGDQEGHD 1635
+E +DEE+GD+ + D PDE + D E +E DP +E + EG D
Sbjct: 361 SETEDEEDGDEDDEDG-----------PDEDEDGDDEEFSGEEGDEGGDPEDEANGEGSD 507
Query: 1636 DSAE------NGNQEDETCPPDEIMEEAHTE 1660
D E NG++ED+ DE +E E
Sbjct: 508 DGDEDDDGDDNGDEEDDDDGEDEEEDEEEDE 600
Score = 38.1 bits (87), Expect = 0.045
Identities = 27/104 (25%), Positives = 47/104 (44%)
Frame = +1
Query: 1547 LRAKDDSTSDQSGDDSCDEGDAQNDEAAAQNEFDDEENGDDVNMDKEAAHSDATGLKPDE 1606
L+ K+ T D+ ++GD +++ D++E+GDD E D G DE
Sbjct: 346 LQNKNSETEDE------EDGDEDDEDGP-----DEDEDGDDEEFSGE--EGDEGGDPEDE 486
Query: 1607 PDHSSDMEIDLNANEDVDPIEEGDQEGHDDSAENGNQEDETCPP 1650
+ + D + + D + EE D +G D+ + E+ET P
Sbjct: 487 ANGEGSDDGDEDDDGDDNGDEEDDDDGEDEEEDEEEDEEETPQP 618
Score = 38.1 bits (87), Expect = 0.045
Identities = 21/79 (26%), Positives = 42/79 (52%), Gaps = 4/79 (5%)
Frame = +1
Query: 1519 NEDETPDDTGEKYESGPSVKDGDGSNKELRAKDDSTS----DQSGDDSCDEGDAQNDEAA 1574
+E E +D E E GP +D DG ++E ++ D++ + D+GD ++D+
Sbjct: 361 SETEDEEDGDEDDEDGPD-EDEDGDDEEFSGEEGDEGGDPEDEANGEGSDDGD-EDDDGD 534
Query: 1575 AQNEFDDEENGDDVNMDKE 1593
+ +D+++G+D D+E
Sbjct: 535 DNGDEEDDDDGEDEEEDEE 591
Score = 37.4 bits (85), Expect = 0.077
Identities = 19/77 (24%), Positives = 35/77 (44%)
Frame = +1
Query: 1618 NANEDVDPIEEGDQEGHDDSAENGNQEDETCPPDEIMEEAHTEVDVSSEKDDLGQEHQEN 1677
N N + + E+GD++ D E+ + +DE +E E E + + E D G E +
Sbjct: 352 NKNSETEDEEDGDEDDEDGPDEDEDGDDEEFSGEEGDEGGDPEDEANGEGSDDGDEDDDG 531
Query: 1678 DDMNSMDPKNDTSESSD 1694
DD + +D + +
Sbjct: 532 DDNGDEEDDDDGEDEEE 582
>TC219641 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 942
Score = 43.5 bits (101), Expect = 0.001
Identities = 34/110 (30%), Positives = 54/110 (48%), Gaps = 1/110 (0%)
Frame = +1
Query: 1480 LSEDSSENEDCDGENEELESEMGPTGPDSEAVGEKIWDQNEDET-PDDTGEKYESGPSVK 1538
L++D+S++++ DG+ EE + + D E E + E+E P+D E +G S
Sbjct: 364 LNKDASDSDE-DGDEEEDDDDADDQ--DDEEGDEDFSGEGEEEADPEDDPEANGAGGSDS 534
Query: 1539 DGDGSNKELRAKDDSTSDQSGDDSCDEGDAQNDEAAAQNEFDDEENGDDV 1588
DGD DD D GDD D+ + E + E +DEE+ +DV
Sbjct: 535 DGD---------DD---DDGGDDDDDDNGDDDGEDEEEGEDEDEEDEEDV 648
Score = 42.4 bits (98), Expect = 0.002
Identities = 29/105 (27%), Positives = 51/105 (47%), Gaps = 1/105 (0%)
Frame = +1
Query: 1490 CDGENEELESEMGPTGPDSEAVGEKIWDQNE-DETPDDTGEKYESGPSVKDGDGSNKELR 1548
C G++ L + DS+ G++ D ++ D+ D+ G++ SG ++ D + +
Sbjct: 340 CKGKHTYL---LNKDASDSDEDGDEEEDDDDADDQDDEEGDEDFSGEGEEEADPED-DPE 507
Query: 1549 AKDDSTSDQSGDDSCDEGDAQNDEAAAQNEFDDEENGDDVNMDKE 1593
A SD GDD D GD +D+ + D+EE D+ D+E
Sbjct: 508 ANGAGGSDSDGDDDDDGGDDDDDDNGDDDGEDEEEGEDEDEEDEE 642
Score = 34.7 bits (78), Expect = 0.50
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 12/87 (13%)
Frame = +1
Query: 1620 NEDV-DPIEEGDQEGHDDSAE-----------NGNQEDETCPPDEIMEEAHTEVDVSSEK 1667
N+D D E+GD+E DD A+ +G E+E P D+ EA+ S+
Sbjct: 367 NKDASDSDEDGDEEEDDDDADDQDDEEGDEDFSGEGEEEADPEDD--PEANGAGGSDSDG 540
Query: 1668 DDLGQEHQENDDMNSMDPKNDTSESSD 1694
DD ++DD N D D E D
Sbjct: 541 DDDDDGGDDDDDDNGDDDGEDEEEGED 621
>TC230133 weakly similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 850
Score = 43.5 bits (101), Expect = 0.001
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Frame = +3
Query: 1542 GSNKELRAKDDS-TSDQSGDDSCDEGDAQNDEAAAQNEFDDEENGDDVNMDKEAAHSDAT 1600
G + KD S T D DD+ ++G+ ND+ +F ++ G++ + D + +
Sbjct: 243 GKHTSEENKDASDTEDDDDDDNVNDGEDDNDD-EEDEDFSGDDGGEEADSDDDPEANGGG 419
Query: 1601 GLKPDEPDHSSDMEIDLNANEDVDPIEEGDQEGHDDSAENGNQ 1643
G D+ D D + N++ D E+ + EG DD E Q
Sbjct: 420 GSDDDDGDDDED-----DDNDEDDGDEDDEDEGDDDEDEESPQ 533
Score = 42.4 bits (98), Expect = 0.002
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Frame = +3
Query: 1507 DSEAVGEKIWDQNED--ETPDDTGEKYESGPSVKDGDGSNKELRAKDDSTSDQSGDDSCD 1564
D G+ ++N+D +T DD + +V DG+ N D+ D SGDD +
Sbjct: 228 DQLCKGKHTSEENKDASDTEDD-----DDDDNVNDGEDDND-----DEEDEDFSGDDGGE 377
Query: 1565 EGDAQNDEAAAQNEFDDEENGDDVNMDKEAAHSDATGLKPDEPDHSSDME 1614
E D+ +D A D+++GDD + D + D DE D D E
Sbjct: 378 EADSDDDPEANGGGGSDDDDGDD-DEDDDNDEDDGDEDDEDEGDDDEDEE 524
Score = 35.4 bits (80), Expect = 0.29
Identities = 26/90 (28%), Positives = 42/90 (45%), Gaps = 4/90 (4%)
Frame = +3
Query: 1609 HSSDMEIDLNANEDVDPIEEGDQEGHDDSAENGNQEDETCPPDEIMEEAHTEVDVSSE-- 1666
H+S+ D + ED D ++ +G DD N ++EDE D+ EEA ++ D +
Sbjct: 249 HTSEENKDASDTEDDDD-DDNVNDGEDD---NDDEEDEDFSGDDGGEEADSDDDPEANGG 416
Query: 1667 --KDDLGQEHQENDDMNSMDPKNDTSESSD 1694
DD + E+DD + D D + D
Sbjct: 417 GGSDDDDGDDDEDDDNDEDDGDEDDEDEGD 506
>TC203787 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 1056
Score = 43.1 bits (100), Expect = 0.001
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 2/145 (1%)
Frame = -3
Query: 1445 SMMQKKEEQEESKEVPGNDNTGIEMDQDFQADAVSLSEDSSENEDCDGENEELESEMGPT 1504
S +Q +++Q +++ GND+ G ++D DG+ E E +
Sbjct: 667 SKIQSEDKQRDAEGEDGNDDEG--------------------DDDDDGDGGFGEGEEELS 548
Query: 1505 GPDSEAVGEKIWDQ-NEDETPD-DTGEKYESGPSVKDGDGSNKELRAKDDSTSDQSGDDS 1562
D G ++ N + P+ G E+G +D DG + +DD D DD
Sbjct: 547 SEDGGGYGNNSNNKSNSKKAPEGGAGGAEENGEEDEDEDGDD-----QDDDDEDDDDDDE 383
Query: 1563 CDEGDAQNDEAAAQNEFDDEENGDD 1587
DE + DE A++E ++E+ D+
Sbjct: 382 EDEAGEEEDEDGAEDEENEEDEEDE 308
Score = 42.4 bits (98), Expect = 0.002
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 2/137 (1%)
Frame = -3
Query: 1523 TPDDTGE-KYESGPSVKDGDGSNKELRAKDDSTSDQSGDDSCDEGDAQNDEAAAQNEFDD 1581
TP GE K +S +D +G + D+ D GD EG+ +E ++++
Sbjct: 688 TPTAKGESKIQSEDKQRDAEGEDGN---DDEGDDDDDGDGGFGEGE---EELSSEDGGGY 527
Query: 1582 EENGDDVNMDKEAAHSDATGLKPD-EPDHSSDMEIDLNANEDVDPIEEGDQEGHDDSAEN 1640
N ++ + K+A A G + + E D D + + +ED D +E D+ G ++ +
Sbjct: 526 GNNSNNKSNSKKAPEGGAGGAEENGEEDEDEDGDDQDDDDEDDDDDDEEDEAGEEEDEDG 347
Query: 1641 GNQEDETCPPDEIMEEA 1657
EDE DE EEA
Sbjct: 346 A--EDEENEEDEEDEEA 302
>TC230134 weakly similar to UP|NUCL_HUMAN (P19338) Nucleolin (Protein C23),
partial (8%)
Length = 581
Score = 42.7 bits (99), Expect = 0.002
Identities = 27/103 (26%), Positives = 49/103 (47%)
Frame = +2
Query: 1481 SEDSSENEDCDGENEELESEMGPTGPDSEAVGEKIWDQNEDETPDDTGEKYESGPSVKDG 1540
SE++ + D + ++++ + G G D + + +ED + DD GE+ +S +
Sbjct: 251 SEENKDASDTEDDDDDDDVNDGEDGDDDD-------EDDEDFSGDDGGEEADSDDDPEAN 409
Query: 1541 DGSNKELRAKDDSTSDQSGDDSCDEGDAQNDEAAAQNEFDDEE 1583
G + DD D DD+ DE D D+ ++E +DEE
Sbjct: 410 GGGESD---DDDEDDDDDDDDN-DEDDGDEDDDDEEDEDEDEE 526
Score = 38.9 bits (89), Expect = 0.026
Identities = 30/107 (28%), Positives = 50/107 (46%)
Frame = +2
Query: 1550 KDDSTSDQSGDDSCDEGDAQNDEAAAQNEFDDEENGDDVNMDKEAAHSDATGLKPDEPDH 1609
K TS+++ D S E D +D+ N+ +D ++ D+ D E D G + D
Sbjct: 236 KGKHTSEENKDASDTEDDDDDDDV---NDGEDGDDDDE---DDEDFSGDDGGEEAD---- 385
Query: 1610 SSDMEIDLNANEDVDPIEEGDQEGHDDSAENGNQEDETCPPDEIMEE 1656
SD + + N + D +E D + DD+ E+ ED+ DE +E
Sbjct: 386 -SDDDPEANGGGESDDDDEDDDDDDDDNDEDDGDEDDDDEEDEDEDE 523
Score = 36.2 bits (82), Expect = 0.17
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Frame = +2
Query: 1507 DSEAVGEKIWDQNED--ETPDDTGEKYESGPSVKDGDGSNKELRAKDDSTSDQSGDDSCD 1564
D G+ ++N+D +T DD + V DG+ + + D+ D SGDD +
Sbjct: 224 DQPCKGKHTSEENKDASDTEDD-----DDDDDVNDGEDGDDD----DEDDEDFSGDDGGE 376
Query: 1565 EGDAQND-------EAAAQNEFDDEENGDDVNMDKEAAHSDATGLKPDEPDHSSDME 1614
E D+ +D E+ +E DD++ DD N + + D DE D D E
Sbjct: 377 EADSDDDPEANGGGESDDDDEDDDDD--DDDNDEDDGDEDD-----DDEEDEDEDEE 526
Score = 34.7 bits (78), Expect = 0.50
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Frame = +2
Query: 1603 KPDEPDHSSDMEIDLNANEDVDPIEEGDQEGHDDSAENGNQEDETCPPDEIMEEAHTEVD 1662
+P + H+S+ D + ED D + D + ++ +++DE D+ EEA ++ D
Sbjct: 227 QPCKGKHTSEENKDASDTEDDD---DDDDVNDGEDGDDDDEDDEDFSGDDGGEEADSDDD 397
Query: 1663 VSS----EKDDLGQEHQENDDMNSMDPKNDTSESSD 1694
+ E DD ++ ++DD N D ++ + +
Sbjct: 398 PEANGGGESDDDDEDDDDDDDDNDEDDGDEDDDDEE 505
>TC208879 similar to GB|AAM65705.1|21593738|AY088161 WRKY transcription factor
12 {Arabidopsis thaliana;} , partial (25%)
Length = 597
Score = 41.6 bits (96), Expect = 0.004
Identities = 18/34 (52%), Positives = 27/34 (78%)
Frame = +2
Query: 1452 EQEESKEVPGNDNTGIEMDQDFQADAVSLSEDSS 1485
++++S EVP ++ TGIE ++DF D +SLSEDSS
Sbjct: 257 KKDDSNEVPSSNYTGIETEKDF*VDTISLSEDSS 358
>CF922292
Length = 722
Score = 41.6 bits (96), Expect = 0.004
Identities = 35/165 (21%), Positives = 71/165 (42%)
Frame = -2
Query: 1569 QNDEAAAQNEFDDEENGDDVNMDKEAAHSDATGLKPDEPDHSSDMEIDLNANEDVDPIEE 1628
QN + + +N + +E D + + D G E D + + N DV E+
Sbjct: 487 QNVDVSQENNSEVKEQATDPSNNNSQQFEDNRG-DLSEDATKGDGSVTPDKNSDVK--EK 317
Query: 1629 GDQEGHDDSAENGNQEDETCPPDEIMEEAHTEVDVSSEKDDLGQEHQENDDMNSMDPKND 1688
+++ + S E +++ +T D + E ++ D S +K D E Q+ D + + K+D
Sbjct: 316 QEEKSDEKSQEKPSEDTKTENQDTSVSEKRSDSDESQQKSD-SDESQQKSDSDESEKKSD 140
Query: 1689 TSESSDVVNPQVSNVDLASQSKSDLQTSGSENIASQSNLSNSHHD 1733
++ES + KSD S ++ + ++ S+ +D
Sbjct: 139 SAES---------------EKKSDSDESEKKSDSDETEKSSESND 50
>TC215822 similar to UP|Q9LW00 (Q9LW00) Arabidopsis thaliana genomic DNA,
chromosome 3, P1 clone: MSJ11, partial (23%)
Length = 1135
Score = 41.6 bits (96), Expect = 0.004
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 18/216 (8%)
Frame = +2
Query: 1506 PDSEAVGEKIWDQNEDETPDDTG---EKYESGPSVKDGDGSNKELRAKDDSTSDQSGDDS 1562
P + + E W E TP + EK +S P D D K R S D +S
Sbjct: 56 PGNPVISEFDWGTGE--TPRRSARISEKVKSTPPA-DSDTPKKRARKSSGSKKDNKETES 226
Query: 1563 C-DEGDAQND--EAAAQNEFDDEENGDDVNMDKEAAHSDATGLKPDEPDHSSDMEIDLNA 1619
+EG A++D + A E +E N + + K+ + D T + DE D++++ N
Sbjct: 227 ASEEGKAKSDTEDPKAAEEEKNEGNDNSNSGGKQLENGDKTE-QIDEQAKKPDVDMEEND 403
Query: 1620 NEDVDPIEEGDQEGHDDSAENGN------------QEDETCPPDEIMEEAHTEVDVSSEK 1667
D + E D + +S NG Q+ E P +++ EEA + +EK
Sbjct: 404 LNDTNNKLENDSDEIKNSHVNGENVIAERPEGEEAQKQEVEPAEKVAEEAANTAE--TEK 577
Query: 1668 DDLGQEHQENDDMNSMDPKNDTSESSDVVNPQVSNV 1703
L + +E ++ + + + + NP + +
Sbjct: 578 SLLTELEKEKNEEKTDTATLEANGGGEKENPNAAQM 685
>TC217786 weakly similar to UP|Q6V9I6 (Q6V9I6) Histone deacetylase, partial
(48%)
Length = 1193
Score = 40.8 bits (94), Expect = 0.007
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 8/138 (5%)
Frame = +2
Query: 1454 EESKEVPGNDNTGIEMDQDFQADAVSLSEDSSENEDCDGE--------NEELESEMGPTG 1505
E+ E+ N G F+A + S S++ +++D D + E+E + G
Sbjct: 272 EKEFELSHNWKHGSVFFTGFKAQSQSESDNDEDSDDFDEDIPVSAANGKPEIEVKNG-IK 448
Query: 1506 PDSEAVGEKIWDQNEDETPDDTGEKYESGPSVKDGDGSNKELRAKDDSTSDQSGDDSCDE 1565
PD+ +K EDE ++ +S +G + DDS ++ GDD DE
Sbjct: 449 PDANEAKQKKIANGEDEDSSESESDDDSSEDQLTANGDIESSEGDDDSDDEEEGDDESDE 628
Query: 1566 GDAQNDEAAAQNEFDDEE 1583
+ EA+ + D +
Sbjct: 629 ETPKKIEASNKRGIDSSK 682
Score = 36.2 bits (82), Expect = 0.17
Identities = 33/118 (27%), Positives = 56/118 (46%), Gaps = 22/118 (18%)
Frame = +2
Query: 1572 EAAAQNEFDDEENGDDVNMDKEAAHSDA-------TGLKPD------------EPDHSSD 1612
+A +Q+E D++E+ DD + D + ++ G+KPD E + SS+
Sbjct: 332 KAQSQSESDNDEDSDDFDEDIPVSAANGKPEIEVKNGIKPDANEAKQKKIANGEDEDSSE 511
Query: 1613 MEIDLNANEDVDPIEEGD---QEGHDDSAENGNQEDETCPPDEIMEEAHTEVDVSSEK 1667
E D +++ED GD EG DDS +DE DE EE +++ S+++
Sbjct: 512 SESDDDSSED-QLTANGDIESSEGDDDS------DDEEEGDDESDEETPKKIEASNKR 664
>AW472204
Length = 441
Score = 40.4 bits (93), Expect = 0.009
Identities = 37/122 (30%), Positives = 50/122 (40%)
Frame = +2
Query: 1557 QSGDDSCDEGDAQNDEAAAQNEFDDEENGDDVNMDKEAAHSDATGLKPDEPDHSSDMEID 1616
+ G D D G D QN D+ + G ++ S L PDE D + ME
Sbjct: 80 EHGFDGHDVGYVPEDPNFPQNHSDEHDVGTVIDS------SGFPHLLPDEDDAGNLME-- 235
Query: 1617 LNANEDVDPIEEGDQEGHDDSAENGNQEDETCPPDEIMEEAHTEVDVSSEKDDLGQEHQE 1676
+AN E D GH+ G D PP+E +EE H DV + D L ++ E
Sbjct: 236 -DAN-----FPENDFVGHEHDV-GGLAGDADSPPEEHVEEVHGAGDVPEDFDSLPKQGSE 394
Query: 1677 ND 1678
D
Sbjct: 395 ID 400
>TC210126 similar to UP|NUCL_HUMAN (P19338) Nucleolin (Protein C23), partial
(7%)
Length = 735
Score = 40.4 bits (93), Expect = 0.009
Identities = 28/103 (27%), Positives = 46/103 (44%)
Frame = +3
Query: 1544 NKELRAKDDSTSDQSGDDSCDEGDAQNDEAAAQNEFDDEENGDDVNMDKEAAHSDATGLK 1603
NK +DD D+ GD+ ++G Q+D+ EF EE GD+ ++ ++ G
Sbjct: 321 NKNSETEDD---DKDGDEDDEDGHDQDDD-GEDEEFSGEE-GDEEGDPEDDPEANGGGSD 485
Query: 1604 PDEPDHSSDMEIDLNANEDVDPIEEGDQEGHDDSAENGNQEDE 1646
D+ D+ + EE D +G D+ E +EDE
Sbjct: 486 DDDDDNDN---------------EEDDDDGEDEEEEEDEEEDE 569
Score = 38.1 bits (87), Expect = 0.045
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +3
Query: 1517 DQNEDETPDDTGEKYESGPSVKDGDGSNKELRAKDDSTSDQ--SGDDSCDEGDAQNDEAA 1574
+ ET DD KDGD +++ +DD D+ SG++ +EGD ++D A
Sbjct: 318 ENKNSETEDDD----------KDGDEDDEDGHDQDDDGEDEEFSGEEGDEEGDPEDDPEA 467
Query: 1575 AQNEFDDEENGDDVNMDKEAAHSDATGLKPDEPDHSSDME 1614
DD+++ +D D + + +E D D E
Sbjct: 468 NGGGSDDDDDDNDNEEDDDDGEDE-----EEEEDEEEDEE 572
Score = 37.0 bits (84), Expect = 0.10
Identities = 32/124 (25%), Positives = 50/124 (39%), Gaps = 2/124 (1%)
Frame = +3
Query: 1589 NMDKEAAHSDATGLKPDEPDHSSDMEIDLNANEDVDPIEEGDQEG--HDDSAENGNQEDE 1646
N + E D G + DE H D D +E+ EEGD+EG DD NG D+
Sbjct: 321 NKNSETEDDDKDGDEDDEDGHDQD---DDGEDEEFSG-EEGDEEGDPEDDPEANGGGSDD 488
Query: 1647 TCPPDEIMEEAHTEVDVSSEKDDLGQEHQENDDMNSMDPKNDTSESSDVVNPQVSNVDLA 1706
D+ + + D E+++ +E E + K S ++V+ +S L
Sbjct: 489 ---DDDDNDNEEDDDDGEDEEEEEDEEEDEEETSQPPTKKRK*EYS*EIVSRHLSRA*LL 659
Query: 1707 SQSK 1710
K
Sbjct: 660 XTDK 671
>TC217235 similar to UP|Q9LW88 (Q9LW88) Arabidopsis thaliana genomic DNA,
chromosome 3, P1 clone: MSL1, partial (36%)
Length = 1253
Score = 39.7 bits (91), Expect = 0.015
Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 10/196 (5%)
Frame = +1
Query: 1551 DDSTSDQSGDDSCDEGDAQNDEAAAQ-NEFDDE-----ENGDDVNMDKEAAHSDATGLKP 1604
D+S S+ + DS GD + + ++ NE +D+ + ++ N DKE
Sbjct: 1 DESKSNDTAKDSEKAGDGEAKQPESKTNEAEDKLTESKDAAEESNADKE----------- 147
Query: 1605 DEPDHSSDMEIDLNANEDVDPIEEGDQEGHDDSAENGNQEDETCPPDEIMEEAHTEVDVS 1664
H+++ E D + D+E + D E+GN++ + D E+ +++D
Sbjct: 148 ----HTAE-------KESTDDESKVDKEQNKDVTESGNEDKK----DATHNESASKLDKE 282
Query: 1665 SEKDDLGQEHQE-NDDMNSMDPKNDTSESSDVVNPQVSNVDLASQSKSDLQTSGSENI-- 1721
D E+ + N++ N++D K+ +ES++ P L KS S S+N
Sbjct: 283 KTGDGKDSENDDKNENTNNVDKKDSKAESAE---PSAEGGHL----KSFQLLSSSQNAFT 441
Query: 1722 -ASQSNLSNSHHDFGN 1736
+ + SNS FG+
Sbjct: 442 GLAGTGFSNSSFSFGS 489
Score = 32.7 bits (73), Expect = 1.9
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = +1
Query: 1476 DAVSLSEDSSENEDCDGENE-ELESEMGPTGPDSEAVGEKIWDQNEDETPDDTGEKYESG 1534
D ++ S+D++E + D E+ E ES + D E + NED+ E
Sbjct: 94 DKLTESKDAAEESNADKEHTAEKESTDDESKVDKEQNKDVTESGNEDKKDATHNESASKL 273
Query: 1535 PSVKDGDGSNKELRAKDDSTSDQSGDDSCDEGDAQNDEAAAQNEF 1579
K GDG + E K+++T++ DS E + E F
Sbjct: 274 DKEKTGDGKDSENDDKNENTNNVDKKDSKAESAEPSAEGGHLKSF 408
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.133 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,615,812
Number of Sequences: 63676
Number of extensions: 1330992
Number of successful extensions: 7743
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 7344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7653
length of query: 2332
length of database: 12,639,632
effective HSP length: 113
effective length of query: 2219
effective length of database: 5,444,244
effective search space: 12080777436
effective search space used: 12080777436
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Medicago: description of AC148398.1