TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148349.13 - phase: 0 
         (348 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC206671 weakly similar to UP|Q8L5A7 (Q8L5A7) Steroid sulfotrans...   428  e-120
AW666192 similar to GP|15809903|gb| AT5g07010/MOJ9_18 {Arabidops...   130  7e-31
CA818985                                                               48  6e-06
TC230792                                                               32  0.43
TC209569                                                               30  2.1
TC204084 UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-binding protein, co...    29  3.6
BI971372                                                               28  6.2
CA851175                                                               28  8.0
BE661879                                                               28  8.0
TC220586 similar to UP|O23470 (O23470) Proline-rich, APG like pr...    28  8.0

>TC206671 weakly similar to UP|Q8L5A7 (Q8L5A7) Steroid sulfotransferase-like
           protein (At5g07010), partial (40%)
          Length = 1308

 Score =  428 bits (1101), Expect = e-120
 Identities = 212/347 (61%), Positives = 264/347 (75%), Gaps = 3/347 (0%)
 Frame = +3

Query: 1   MASTDLTNMKED-QSRDGQETTSKVNKVSHDYNNLILSLPRENGCETQYMYFFHGFWCPS 59
           MA T++T  +E+ +S  G+E T + +K+S +   LILSLPRE G  T+Y+Y F GFWC  
Sbjct: 36  MAPTNVTCFREENESEKGEEITIEEDKLSQECKELILSLPRERGWRTRYIYLFQGFWCQP 215

Query: 60  TLIQSVNSFQNNFHAKDSDIVVASIPKSGTTWLKGLAYAIVNRQ--HFTSLENNHPLLLF 117
             IQ++ +FQ +F AKDSD++VA+IPKSGTTWLK L +AIVNR     T+  ++HPLL  
Sbjct: 216 LEIQAIITFQKHFQAKDSDVIVATIPKSGTTWLKALTFAIVNRHTHSITTSMSSHPLLTS 395

Query: 118 NPHELVPQFEVNLYGDKDGPLPQIDVSNMTEPRLFGTHMPFPSLPKSVKESNCKIIYICR 177
           NPHELVP  E  +YG+    +P +  SNMTEPRLFGTH+PF +L KS+KESN +IIYICR
Sbjct: 396 NPHELVPFIEYTVYGNAPSHVPNL--SNMTEPRLFGTHIPFHALAKSIKESNSRIIYICR 569

Query: 178 NPFDTFVSYWIFINKIRLRKSLTELTLEESFERYCKGICLFGPFWDNMLGYLKESIERPD 237
           NP DTFVS WIF+NKI+  + L E  L E+FE+YCKGI  FGP WD MLGY KESI RP 
Sbjct: 570 NPLDTFVSTWIFLNKIK-PEHLPEFELGEAFEKYCKGIIGFGPTWDQMLGYWKESIARPS 746

Query: 238 RVLFLKYEDLKEDVNFHTKRIAEFVGIPFTQEEENNGVIENIIKLCSFESMKEIEGNQSG 297
           +VLFLKYEDLK+DVNFH KRIAEF+G PFT EEE +G IE+IIKLCSFE MKE+E N+SG
Sbjct: 747 KVLFLKYEDLKKDVNFHVKRIAEFLGCPFTSEEEGDGTIESIIKLCSFEKMKELEANKSG 926

Query: 298 TISGDIEKEFYFRKGEIGDWANYLSSSMVEKLSKVMEEKLNGSSLSF 344
           T + + E+++ FRK E+GDW NYLS  M EKLS++MEEKL+GS LSF
Sbjct: 927 TFARNFERKYLFRKAEMGDWVNYLSPEMGEKLSQIMEEKLSGSGLSF 1067


>AW666192 similar to GP|15809903|gb| AT5g07010/MOJ9_18 {Arabidopsis
           thaliana}, partial (11%)
          Length = 454

 Score =  130 bits (328), Expect = 7e-31
 Identities = 67/149 (44%), Positives = 97/149 (64%), Gaps = 2/149 (1%)
 Frame = +2

Query: 27  VSHDYNNLILSLPRENGCETQYMYFFHGFWCPSTLIQSVNSFQNNFHAKDSDIVVASIPK 86
           +S     LILSLP+E    T Y+Y F  F C    IQ++ +FQ +F AKDS+I++ +IPK
Sbjct: 14  LSQKCKELILSLPKEKS*XTHYIYLFQRF*CQPLKIQAIITFQXHFQAKDSNIIITTIPK 193

Query: 87  SGTTWLKGLAYAIVNR--QHFTSLENNHPLLLFNPHELVPQFEVNLYGDKDGPLPQIDVS 144
           S TT LK L + I+N      T+  ++HPLL  NPH+L+P  E  +Y +    +P  ++S
Sbjct: 194 SSTT*LKTLTFTIINHHTHSITTSISSHPLLTSNPHKLIPFIEYTIYNNTPSHIP--NLS 367

Query: 145 NMTEPRLFGTHMPFPSLPKSVKESNCKII 173
           N+T+P+LF TH+PF +L KS+KESN KI+
Sbjct: 368 NITKPKLFSTHIPFHTLAKSIKESNYKIM 454


>CA818985 
          Length = 421

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 20/60 (33%), Positives = 40/60 (66%)
 Frame = +3

Query: 285 FESMKEIEGNQSGTISGDIEKEFYFRKGEIGDWANYLSSSMVEKLSKVMEEKLNGSSLSF 344
           F+++  ++ N++G +S   E + +FR G+IGD  N+L++ M+++L+ + +EKL    L F
Sbjct: 3   FDNLSNLQVNKNGKLSSGEEHKAFFRCGQIGDCKNHLTAEMIQQLNTITQEKLAEHGLRF 182


>TC230792 
          Length = 562

 Score = 32.0 bits (71), Expect = 0.43
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 168 SNCKIIYICRNPFDTFVSYWIFINKIR 194
           SNC  +Y+C   F  FVS W++I K+R
Sbjct: 423 SNCFFVYVCI--FALFVSIWLYIGKVR 497


>TC209569 
          Length = 1178

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -1

Query: 137 PLPQIDVSNMTEPRLFGTHMPFPSLPKSVKESNC 170
           PLP++ +++ T    F + + FPSLP+++K  +C
Sbjct: 152 PLPEVRLNSETSGLTFPSLIKFPSLPETLKIFDC 51


>TC204084 UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-binding protein, complete
          Length = 1937

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 20/56 (35%), Positives = 30/56 (52%), Gaps = 3/56 (5%)
 Frame = -1

Query: 106  TSLENNHPLLL---FNPHELVPQFEVNLYGDKDGPLPQIDVSNMTEPRLFGTHMPF 158
            T+L ++ PL L   F PH  V + E + +GD DGP      S   + +LF  ++PF
Sbjct: 1001 TTLSSSSPLSLSSRFVPHVSVLEQEEDTFGDGDGP------SFSRDLKLFVGNLPF 852


>BI971372 
          Length = 204

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = -2

Query: 325 MVEKLSKVMEEKLNGSSLSFKVC 347
           M E L ++ME KL+GS LSF VC
Sbjct: 143 MGEDLWRIME*KLSGSGLSF*VC 75


>CA851175 
          Length = 537

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 12/50 (24%), Positives = 26/50 (52%)
 Frame = -2

Query: 166 KESNCKIIYICRNPFDTFVSYWIFINKIRLRKSLTELTLEESFERYCKGI 215
           K+  C++    R  F  + S+  F+N+ + R+++    +   FE + +GI
Sbjct: 296 KQIKCRLCSAIRKVFSRWSSFNSFLNRAQSRRNIDNTRMCGFFEEFIEGI 147


>BE661879 
          Length = 552

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
 Frame = +3

Query: 24  VNKVSHDYNNLI----LSLPRENGCETQYMYFFH 53
           VN VSH + +LI    LSLP + G    ++YFF+
Sbjct: 87  VNSVSHAFLSLIGSRLLSLPFKQGSVHSWVYFFY 188


>TC220586 similar to UP|O23470 (O23470) Proline-rich, APG like protein,
           partial (8%)
          Length = 918

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 15/44 (34%), Positives = 22/44 (49%), Gaps = 3/44 (6%)
 Frame = +1

Query: 48  YMYFFHGFWCPS---TLIQSVNSFQNNFHAKDSDIVVASIPKSG 88
           Y YF + FWC     T+I + N  Q  F+      VVA++  +G
Sbjct: 688 YKYFSYKFWCYGY*LTIILTFNHMQRVFNLIVRKFVVANVGPTG 819


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.319    0.137    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,228,569
Number of Sequences: 63676
Number of extensions: 271875
Number of successful extensions: 1374
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1369
length of query: 348
length of database: 12,639,632
effective HSP length: 98
effective length of query: 250
effective length of database: 6,399,384
effective search space: 1599846000
effective search space used: 1599846000
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)